ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl46c01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AFSK_STRCO (P54741) Serine/threonine protein kinase afsK (EC 2.7... 29 3.0
2KLP1_CHLRE (P46870) Kinesin-like protein KLP1 28 4.0

>AFSK_STRCO (P54741) Serine/threonine protein kinase afsK (EC 2.7.11.1)|
          Length = 799

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
 Frame = +3

Query: 9   PHLFXXXXXXXXXXXXXXXXXXXSVSDGRRTGAVIVRPAHTAAG-GH 146
           PHLF                    + +GRR G   V+PA TA G GH
Sbjct: 267 PHLFGSGSDDSGTASAWLPERAVGLIEGRRNGRPAVKPATTAGGRGH 313



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>KLP1_CHLRE (P46870) Kinesin-like protein KLP1|
          Length = 776

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +3

Query: 93  RRTGAVIVRPAHTAAGGHPKA 155
           +RTGA + RPA  A GG+ KA
Sbjct: 736 KRTGAAVSRPATVATGGNAKA 756


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.313    0.132    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,541,112
Number of Sequences: 219361
Number of extensions: 339157
Number of successful extensions: 1199
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1196
length of database: 80,573,946
effective HSP length: 112
effective length of database: 56,005,514
effective search space used: 1344132336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
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