ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl46c01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_473136.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2499 Score = 127 bits (64), Expect = 3e-26 Identities = 85/92 (92%) Strand = Plus / Plus Query: 253 atggtcgaggaccccttcctcgtcctcgccggcggcaaggaaggagggttcctggagctg 312 ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 169 atggtcgaggaccccttcctcgtactcgccggaggcaaggaaggagggttcctggagctt 228 Query: 313 gaggagatcgacggggccgatttcgggatctt 344 ||||||||||||| ||| || ||||| ||||| Sbjct: 229 gaggagatcgacgaggcggacttcggaatctt 260
>dbj|AK072655.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134D07, full insert sequence Length = 2707 Score = 127 bits (64), Expect = 3e-26 Identities = 85/92 (92%) Strand = Plus / Plus Query: 253 atggtcgaggaccccttcctcgtcctcgccggcggcaaggaaggagggttcctggagctg 312 ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 221 atggtcgaggaccccttcctcgtactcgccggaggcaaggaaggagggttcctggagctt 280 Query: 313 gaggagatcgacggggccgatttcgggatctt 344 ||||||||||||| ||| || ||||| ||||| Sbjct: 281 gaggagatcgacgaggcggacttcggaatctt 312
>emb|AL606622.3|OSJN00059 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0004N05, complete sequence Length = 158601 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 253 atggtcgaggaccccttcctcgtcctcgccggcggcaaggaaggagg 299 ||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 833 atggtcgaggaccccttcctcgtactcgccggaggcaaggaaggagg 787 Score = 56.0 bits (28), Expect = 9e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 297 agggttcctggagctggaggagatcgacggggccgatttcgggatctt 344 ||||||||||||||| ||||||||||||| ||| || ||||| ||||| Sbjct: 698 agggttcctggagcttgaggagatcgacgaggcggacttcggaatctt 651 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 cagcgccaccgcctcctcctc 68 ||||||||||||||||||||| Sbjct: 127304 cagcgccaccgcctcctcctc 127324
>emb|AL606607.3|OSJN00068 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0065L13, complete sequence Length = 103039 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 253 atggtcgaggaccccttcctcgtcctcgccggcggcaaggaaggagg 299 ||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 92130 atggtcgaggaccccttcctcgtactcgccggaggcaaggaaggagg 92084 Score = 56.0 bits (28), Expect = 9e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 297 agggttcctggagctggaggagatcgacggggccgatttcgggatctt 344 ||||||||||||||| ||||||||||||| ||| || ||||| ||||| Sbjct: 91995 agggttcctggagcttgaggagatcgacgaggcggacttcggaatctt 91948
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 253 atggtcgaggaccccttcctcgtcctcgccggcggcaaggaaggagg 299 ||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 25514637 atggtcgaggaccccttcctcgtactcgccggaggcaaggaaggagg 25514591 Score = 56.0 bits (28), Expect = 9e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 297 agggttcctggagctggaggagatcgacggggccgatttcgggatctt 344 ||||||||||||||| ||||||||||||| ||| || ||||| ||||| Sbjct: 25514502 agggttcctggagcttgaggagatcgacgaggcggacttcggaatctt 25514455 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 cagcgccaccgcctcctcctc 68 ||||||||||||||||||||| Sbjct: 26704582 cagcgccaccgcctcctcctc 26704562 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 cagcgccaccgcctcctcctc 68 ||||||||||||||||||||| Sbjct: 25641106 cagcgccaccgcctcctcctc 25641126
>ref|XM_550167.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1993 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Minus Query: 45 caccagcgccaccgcctcctcctcccgccgcc 76 ||||| ||||||| |||||||||||||||||| Sbjct: 436 caccaccgccaccccctcctcctcccgccgcc 405
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Minus Query: 45 caccagcgccaccgcctcctcctcccgccgcc 76 ||||| ||||||| |||||||||||||||||| Sbjct: 2769574 caccaccgccaccccctcctcctcccgccgcc 2769543 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 53 ccaccgcctcctcctcccgccg 74 |||||||||||||||||||||| Sbjct: 21281097 ccaccgcctcctcctcccgccg 21281076
>dbj|AP002522.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0009G03 Length = 163526 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Minus Query: 45 caccagcgccaccgcctcctcctcccgccgcc 76 ||||| ||||||| |||||||||||||||||| Sbjct: 75251 caccaccgccaccccctcctcctcccgccgcc 75220
>dbj|AK120558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131K08, full insert sequence Length = 1995 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Minus Query: 45 caccagcgccaccgcctcctcctcccgccgcc 76 ||||| ||||||| |||||||||||||||||| Sbjct: 436 caccaccgccaccccctcctcctcccgccgcc 405
>ref|NM_001031049.1| Gallus gallus lysophosphatidylglycerol acyltransferase 1 (LPGAT1), mRNA Length = 2574 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 cagcgccaccgcctcctcctccc 70 ||||||||||||||||||||||| Sbjct: 100 cagcgccaccgcctcctcctccc 78
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 46 accagcgccaccgcctcctcctc 68 ||||||||||||||||||||||| Sbjct: 2171799 accagcgccaccgcctcctcctc 2171821
>gb|AC121819.3| Mus musculus BAC clone RP23-460F21 from chromosome 8, complete sequence Length = 194109 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 8 ccctcacctcttccttcccttgt 30 ||||||||||||||||||||||| Sbjct: 35930 ccctcacctcttccttcccttgt 35952
>ref|XM_533688.2| PREDICTED: Canis familiaris similar to Amyloid-like protein 1 precursor (APLP) (APLP-1) (LOC476478), mRNA Length = 2848 Score = 46.1 bits (23), Expect = 0.089 Identities = 26/27 (96%) Strand = Plus / Minus Query: 51 cgccaccgcctcctcctcccgccgccc 77 |||| |||||||||||||||||||||| Sbjct: 489 cgccgccgcctcctcctcccgccgccc 463
>emb|AJ720154.1| Gallus gallus mRNA for hypothetical protein, clone 11l17 Length = 2574 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 48 cagcgccaccgcctcctcctccc 70 ||||||||||||||||||||||| Sbjct: 100 cagcgccaccgcctcctcctccc 78
>gb|AC132287.3| Mus musculus BAC clone RP24-302M13 from 8, complete sequence Length = 195405 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 8 ccctcacctcttccttcccttgt 30 ||||||||||||||||||||||| Sbjct: 164883 ccctcacctcttccttcccttgt 164905
>dbj|D86074.1| Pinctada fucata mRNA for insoluble protein, complete cds Length = 3331 Score = 46.1 bits (23), Expect = 0.089 Identities = 26/27 (96%) Strand = Plus / Minus Query: 43 agcaccagcgccaccgcctcctcctcc 69 |||||||||||| |||||||||||||| Sbjct: 1105 agcaccagcgcctccgcctcctcctcc 1079
>gb|AC167970.4| Mus musculus BAC clone RP24-471H15 from chromosome 7, complete sequence Length = 238950 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 56 ccgcctcctcctcccgccgccc 77 |||||||||||||||||||||| Sbjct: 174737 ccgcctcctcctcccgccgccc 174716
>gb|BC076777.1| Xenopus laevis cDNA clone MGC:83678 IMAGE:6637789, complete cds Length = 3997 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 46 accagcgccaccgcctcctcct 67 |||||||||||||||||||||| Sbjct: 1626 accagcgccaccgcctcctcct 1647
>gb|AC149067.3| Mus musculus BAC clone RP23-56C20 from chromosome 7, complete sequence Length = 267610 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 56 ccgcctcctcctcccgccgccc 77 |||||||||||||||||||||| Sbjct: 254253 ccgcctcctcctcccgccgccc 254274
>dbj|AP003267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0496H05 Length = 147817 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 53 ccaccgcctcctcctcccgccg 74 |||||||||||||||||||||| Sbjct: 3035 ccaccgcctcctcctcccgccg 3014
>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1064G04 Length = 186704 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 53 ccaccgcctcctcctcccgccg 74 |||||||||||||||||||||| Sbjct: 178606 ccaccgcctcctcctcccgccg 178585
>gb|AC122193.5| Mus musculus BAC clone RP23-45G16 from 6, complete sequence Length = 211512 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 52 gccaccgcctcctcctcccgcc 73 |||||||||||||||||||||| Sbjct: 39238 gccaccgcctcctcctcccgcc 39217
>gb|U33503.1|MMU33503 Mus musculus amyloid precursor-like protein 1 (APLP1) gene, 5' flanking region Length = 704 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 56 ccgcctcctcctcccgccgccc 77 |||||||||||||||||||||| Sbjct: 616 ccgcctcctcctcccgccgccc 595
>ref|NM_119522.2| Arabidopsis thaliana rhodopsin-like receptor AT4G33660 mRNA, complete cds Length = 541 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 caccagcgccaccgcctcctcctcc 69 ||||| ||||||||||||||||||| Sbjct: 227 caccaccgccaccgcctcctcctcc 251
>ref|XM_481912.1| Oryza sativa (japonica cultivar-group), mRNA Length = 426 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 51 cgccaccgcctcctcctcccgccgc 75 ||||||||||||||||||| ||||| Sbjct: 126 cgccaccgcctcctcctcctgccgc 102
>ref|NM_196191.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0032N04.22), mRNA Length = 2097 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 55 accgcctcctcctcccgccgccctc 79 |||||||||||||||||||| |||| Sbjct: 113 accgcctcctcctcccgccggcctc 137
>ref|NM_198321.2| Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10) (GALNT10), transcript variant 1, mRNA Length = 5222 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 gccgctagcaccagcgccaccgcct 61 ||||| ||||||||||||||||||| Sbjct: 185 gccgccagcaccagcgccaccgcct 161
>ref|XM_423253.1| PREDICTED: Gallus gallus similar to swelling-induced chloride conductance regulatory protein pIcIn (LOC425500), partial mRNA Length = 1711 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 gccaccgcctcctcctcccgccgcc 76 ||||||||||||||||||| ||||| Sbjct: 324 gccaccgcctcctcctccctccgcc 300
>gb|AY523972.1|AY523972S1 Azospirillum brasilense plasmid 90 MDa, partial sequence Length = 24000 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 gcaccagcgccaccgcctcctcctc 68 ||||||| ||||||||||||||||| Sbjct: 14911 gcaccagggccaccgcctcctcctc 14935
>gb|BC050333.1| Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10), mRNA (cDNA clone IMAGE:4838534), with apparent retained intron Length = 4359 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 gccgctagcaccagcgccaccgcct 61 ||||| ||||||||||||||||||| Sbjct: 185 gccgccagcaccagcgccaccgcct 161
>ref|XM_898869.2| PREDICTED: Mus musculus E3 ubiquitin protein ligase, HECT domain containing, 1, transcript variant 5 (Edd1), mRNA Length = 9793 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 cgccaccgcctcctcctcccg 71 ||||||||||||||||||||| Sbjct: 335 cgccaccgcctcctcctcccg 315
>ref|XM_196130.7| PREDICTED: Mus musculus E3 ubiquitin protein ligase, HECT domain containing, 1, transcript variant 1 (Edd1), mRNA Length = 9772 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 cgccaccgcctcctcctcccg 71 ||||||||||||||||||||| Sbjct: 335 cgccaccgcctcctcctcccg 315
>gb|AC122199.4| Mus musculus BAC clone RP23-57C9 from chromosome 8, complete sequence Length = 202975 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ccctcacctcttccttccctt 28 ||||||||||||||||||||| Sbjct: 172373 ccctcacctcttccttccctt 172353
>gb|AC122035.2| Mus musculus BAC clone RP24-414B1 from 15, complete sequence Length = 179617 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 cgccaccgcctcctcctcccg 71 ||||||||||||||||||||| Sbjct: 54823 cgccaccgcctcctcctcccg 54843
>ref|XM_546283.2| PREDICTED: Canis familiaris similar to GalNAc transferase 10 isoform a (LOC489165), mRNA Length = 2637 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 gccgctagcaccagcgccaccgcct 61 ||||| ||||||||||||||||||| Sbjct: 878 gccgccagcaccagcgccaccgcct 854
>gb|AC010295.7| Homo sapiens chromosome 5 clone CTB-143H13, complete sequence Length = 108051 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 37 gccgctagcaccagcgccaccgcct 61 ||||| ||||||||||||||||||| Sbjct: 7309 gccgccagcaccagcgccaccgcct 7333
>emb|AL662998.4|OSJN00196 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0020O11, complete sequence Length = 113677 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 cagcgccaccgcctcctcctc 68 ||||||||||||||||||||| Sbjct: 78613 cagcgccaccgcctcctcctc 78633
>emb|AL606659.3|OSJN00108 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0070J16, complete sequence Length = 130718 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 cagcgccaccgcctcctcctc 68 ||||||||||||||||||||| Sbjct: 20833 cagcgccaccgcctcctcctc 20853
>emb|AL161584.2|ATCHRIV80 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 80 Length = 192861 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 45 caccagcgccaccgcctcctcctcc 69 ||||| ||||||||||||||||||| Sbjct: 1279 caccaccgccaccgcctcctcctcc 1255
>emb|AL161583.2|ATCHRIV79 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 79 Length = 199536 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 45 caccagcgccaccgcctcctcctcc 69 ||||| ||||||||||||||||||| Sbjct: 195815 caccaccgccaccgcctcctcctcc 195791
>emb|AL031394.1|ATT16L1 Arabidopsis thaliana DNA chromosome 4, BAC clone T16L1 (ESSAII project) Length = 98124 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 45 caccagcgccaccgcctcctcctcc 69 ||||| ||||||||||||||||||| Sbjct: 48497 caccaccgccaccgcctcctcctcc 48473
>emb|AJ505950.1|HSA505950 Homo sapiens mRNA for polypeptide N-acetylgalactosaminyltransferase 10 (GALNT10 gene) Length = 1812 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 gccgctagcaccagcgccaccgcct 61 ||||| ||||||||||||||||||| Sbjct: 53 gccgccagcaccagcgccaccgcct 29
>gb|AC114474.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032N04, from chromosome 10, complete sequence Length = 159445 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 55 accgcctcctcctcccgccgccctc 79 |||||||||||||||||||| |||| Sbjct: 129059 accgcctcctcctcccgccggcctc 129083
>gb|AC107030.3| Homo sapiens 3 BAC RP11-603J22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 171343 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 151 aggcctaagaaaaataagaaa 171 ||||||||||||||||||||| Sbjct: 106846 aggcctaagaaaaataagaaa 106866
>dbj|AK127135.1| Homo sapiens cDNA FLJ45192 fis, clone BRAWH3049544, weakly similar to Polypeptide N-acetylgalactosaminyltransferase (EC 2.4.1.41) Length = 3938 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 gccgctagcaccagcgccaccgcct 61 ||||| ||||||||||||||||||| Sbjct: 154 gccgccagcaccagcgccaccgcct 130
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 266 ccttcctcgtcctcgccggcg 286 ||||||||||||||||||||| Sbjct: 4161245 ccttcctcgtcctcgccggcg 4161265
>ref|NM_133108.2| Drosophila melanogaster CG32542-RA (CG32542), mRNA Length = 8611 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 45 caccagcgccaccgcctcctcctcc 69 ||||| ||||||||||||||||||| Sbjct: 3901 caccaccgccaccgcctcctcctcc 3877
>gb|AC092748.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0019N10, from chromosome 10, complete sequence Length = 192267 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 55 accgcctcctcctcccgccgccctc 79 |||||||||||||||||||| |||| Sbjct: 103321 accgcctcctcctcccgccggcctc 103297
>gb|AC011927.11| Homo sapiens chromosome 15, clone RP11-15O14, complete sequence Length = 162662 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 ccctcacctcttccttccctt 28 ||||||||||||||||||||| Sbjct: 144691 ccctcacctcttccttccctt 144711
>gb|AC032011.15| Homo sapiens chromosome 15, clone RP11-435J9, complete sequence Length = 201200 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 ccctcacctcttccttccctt 28 ||||||||||||||||||||| Sbjct: 18521 ccctcacctcttccttccctt 18541
>gb|AY060485.1| Drosophila melanogaster SD09360 full length cDNA Length = 4818 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 45 caccagcgccaccgcctcctcctcc 69 ||||| ||||||||||||||||||| Sbjct: 88 caccaccgccaccgcctcctcctcc 64
>gb|BT024533.1| Arabidopsis thaliana At4g33660 mRNA, complete cds Length = 231 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 caccagcgccaccgcctcctcctcc 69 ||||| ||||||||||||||||||| Sbjct: 98 caccaccgccaccgcctcctcctcc 122
>gb|AC162947.2| Mus musculus BAC clone RP23-12D16 from chromosome 8, complete sequence Length = 230889 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ccctcacctcttccttccctt 28 ||||||||||||||||||||| Sbjct: 13905 ccctcacctcttccttccctt 13885
>gb|AC018490.6| Drosophila melanogaster, chromosome X, region 17E-17F, BAC clone BACR25O02, complete sequence Length = 165098 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 45 caccagcgccaccgcctcctcctcc 69 ||||| ||||||||||||||||||| Sbjct: 82489 caccaccgccaccgcctcctcctcc 82465
>ref|XM_625969.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd5_40), partial mRNA Length = 5655 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 caccagcgccaccgcctcctcctcc 69 ||||| ||||||||||||||||||| Sbjct: 3539 caccaccgccaccgcctcctcctcc 3563
>gb|AF490475.1| Hordeum vulgare subsp. vulgare cultivar Morex CONSTANS-like protein (CO4) mRNA, complete cds Length = 1230 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 gctagcaccagcgccaccgcc 60 ||||||||||||||||||||| Sbjct: 71 gctagcaccagcgccaccgcc 51
>gb|AC091394.2|AC091394 Homo sapiens chromosome 5 clone CTD-2231K23, complete sequence Length = 134928 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ccctcacctcttccttccctt 28 ||||||||||||||||||||| Sbjct: 77095 ccctcacctcttccttccctt 77075
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 gccaccgcctcctcctcccgc 72 ||||||||||||||||||||| Sbjct: 581124 gccaccgcctcctcctcccgc 581104 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 gccaccgcctcctcctcccgc 72 ||||||||||||||||||||| Sbjct: 581028 gccaccgcctcctcctcccgc 581008
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 55 accgcctcctcctcccgccgccctc 79 |||||||||||||||||||| |||| Sbjct: 11810998 accgcctcctcctcccgccggcctc 11811022 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gcgccaccgcctcctcctcc 69 |||||||||||||||||||| Sbjct: 22310655 gcgccaccgcctcctcctcc 22310674
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 53 ccaccgcctcctcctcccgccgccc 77 |||||||| |||||||||||||||| Sbjct: 9646178 ccaccgccccctcctcccgccgccc 9646154 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gcgccaccgcctcctcctcc 69 |||||||||||||||||||| Sbjct: 3601233 gcgccaccgcctcctcctcc 3601252
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 51 cgccaccgcctcctcctcccgccgc 75 ||||||||||||||||||| ||||| Sbjct: 16329795 cgccaccgcctcctcctcctgccgc 16329771
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 gcgccaccgcctcctcctccc 70 ||||||||||||||||||||| Sbjct: 3904314 gcgccaccgcctcctcctccc 3904334 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 53 ccaccgcctcctcctcccgccgcc 76 ||||| |||||||||||||||||| Sbjct: 3688818 ccacctcctcctcctcccgccgcc 3688795
>gb|AY084490.1| Arabidopsis thaliana clone 109432 mRNA, complete sequence Length = 480 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 caccagcgccaccgcctcctcctcc 69 ||||| ||||||||||||||||||| Sbjct: 227 caccaccgccaccgcctcctcctcc 251
>dbj|AP004670.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0496D04 Length = 197358 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 gcgccaccgcctcctcctccc 70 ||||||||||||||||||||| Sbjct: 143426 gcgccaccgcctcctcctccc 143446
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 agcaccagcgccaccgcctcc 63 ||||||||||||||||||||| Sbjct: 3938676 agcaccagcgccaccgcctcc 3938696
>dbj|AP003843.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1656_E11 Length = 116211 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 gcgccaccgcctcctcctccc 70 ||||||||||||||||||||| Sbjct: 7040 gcgccaccgcctcctcctccc 7060
>dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0706E03 Length = 188028 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 53 ccaccgcctcctcctcccgccgccc 77 |||||||| |||||||||||||||| Sbjct: 86275 ccaccgccccctcctcccgccgccc 86251
>dbj|AP005520.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0426E02 Length = 166985 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 51 cgccaccgcctcctcctcccgccgc 75 ||||||||||||||||||| ||||| Sbjct: 35647 cgccaccgcctcctcctcctgccgc 35623
>dbj|AK104976.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-H07, full insert sequence Length = 2293 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 55 accgcctcctcctcccgccgccctc 79 |||||||||||||||||||| |||| Sbjct: 124 accgcctcctcctcccgccggcctc 148
>dbj|AK069060.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023005G23, full insert sequence Length = 2323 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 55 accgcctcctcctcccgccgccctc 79 |||||||||||||||||||| |||| Sbjct: 153 accgcctcctcctcccgccggcctc 177
>dbj|AK067144.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096F13, full insert sequence Length = 3593 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 cagcgccaccgcctcctcctc 68 ||||||||||||||||||||| Sbjct: 1200 cagcgccaccgcctcctcctc 1180
>gb|AE003510.5| Drosophila melanogaster chromosome X, section 62 of 74 of the complete sequence Length = 297236 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 45 caccagcgccaccgcctcctcctcc 69 ||||| ||||||||||||||||||| Sbjct: 117716 caccaccgccaccgcctcctcctcc 117692
>dbj|AB078145.1| Homo sapiens GALNT10 mRNA for UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10, complete cds Length = 1812 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 gccgctagcaccagcgccaccgcct 61 ||||| ||||||||||||||||||| Sbjct: 53 gccgccagcaccagcgccaccgcct 29
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 55 accgcctcctcctcccgccgccctc 79 |||||||||||||||||||| |||| Sbjct: 11818338 accgcctcctcctcccgccggcctc 11818362 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gcgccaccgcctcctcctcc 69 |||||||||||||||||||| Sbjct: 22322723 gcgccaccgcctcctcctcc 22322742
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 gccaccgcctcctcctcccgc 72 ||||||||||||||||||||| Sbjct: 581124 gccaccgcctcctcctcccgc 581104 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 gccaccgcctcctcctcccgc 72 ||||||||||||||||||||| Sbjct: 581028 gccaccgcctcctcctcccgc 581008
>emb|BX000510.1|CNS08CE0 Oryza sativa chromosome 12, . BAC OJ1769_D07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 115859 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 gccaccgcctcctcctcccgc 72 ||||||||||||||||||||| Sbjct: 67815 gccaccgcctcctcctcccgc 67835 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 gccaccgcctcctcctcccgc 72 ||||||||||||||||||||| Sbjct: 67719 gccaccgcctcctcctcccgc 67739
>gb|AC127086.4| Mus musculus BAC clone RP24-540I5 from 8, complete sequence Length = 161316 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ccctcacctcttccttccctt 28 ||||||||||||||||||||| Sbjct: 17016 ccctcacctcttccttccctt 16996
>dbj|AK074132.1| Homo sapiens mRNA for FLJ00205 protein Length = 4188 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 gccgctagcaccagcgccaccgcct 61 ||||| ||||||||||||||||||| Sbjct: 33 gccgccagcaccagcgccaccgcct 9
>ref|XM_493826.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2859 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 ccaccgcctcctcctcccgccgcc 76 ||||| |||||||||||||||||| Sbjct: 270 ccaccacctcctcctcccgccgcc 293
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gcaggaagaaaccgaagaaa 195 |||||||||||||||||||| Sbjct: 1523540 gcaggaagaaaccgaagaaa 1523559
>ref|XM_474887.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2289 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 46 accagcgccaccgcctcctcctcc 69 |||||| ||||||||||||||||| Sbjct: 1698 accagctccaccgcctcctcctcc 1721
>ref|NM_184655.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2268 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 43 agcaccagcgccaccgcctcctcctccc 70 |||||||||||| | ||||||||||||| Sbjct: 355 agcaccagcgccgcggcctcctcctccc 382
>ref|XM_468376.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1591 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 tcctcgtcctcgccggcggc 288 |||||||||||||||||||| Sbjct: 88 tcctcgtcctcgccggcggc 107
>ref|XM_467050.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1887 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 gcgccaccgcctcctcctcc 69 |||||||||||||||||||| Sbjct: 706 gcgccaccgcctcctcctcc 687
>ref|XM_465173.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1130 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 cgccaccgcctcctcctccc 70 |||||||||||||||||||| Sbjct: 58 cgccaccgcctcctcctccc 77
>ref|XM_506784.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0026D20.9 mRNA Length = 1318 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 cgccaccgcctcctcctccc 70 |||||||||||||||||||| Sbjct: 83 cgccaccgcctcctcctccc 102
>ref|XM_465059.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2568 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 ccgcctcctcctcccgccgccctc 79 |||||||||||||| ||||||||| Sbjct: 55 ccgcctcctcctccagccgccctc 78
>ref|NM_197866.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0003O19.3), mRNA Length = 1190 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 gcgccaccgcctcctcctcc 69 |||||||||||||||||||| Sbjct: 103 gcgccaccgcctcctcctcc 84
>ref|XM_450262.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1467 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gcgccaccgcctcctcctcc 69 |||||||||||||||||||| Sbjct: 358 gcgccaccgcctcctcctcc 377
>ref|XM_507426.1| PREDICTED Oryza sativa (japonica cultivar-group), P0499G10.19 mRNA Length = 1490 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gcgccaccgcctcctcctcc 69 |||||||||||||||||||| Sbjct: 406 gcgccaccgcctcctcctcc 425
>ref|XM_506639.2| PREDICTED Oryza sativa (japonica cultivar-group), P0499G10.19 mRNA Length = 1539 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gcgccaccgcctcctcctcc 69 |||||||||||||||||||| Sbjct: 430 gcgccaccgcctcctcctcc 449
>ref|XM_450181.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2457 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 46 accagcgccaccgcctcctcctcc 69 |||||| ||||||||||||||||| Sbjct: 1644 accagctccaccgcctcctcctcc 1667
>ref|XM_476736.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3102 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 ccaccgcctcctcctcccgccgcc 76 ||||| |||||||||||||||||| Sbjct: 89 ccacctcctcctcctcccgccgcc 112
>ref|XM_471358.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2505 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 46 accagcgccaccgcctcctcctcc 69 |||||| ||||||||||||||||| Sbjct: 2310 accagctccaccgcctcctcctcc 2333
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 cctcgtcctcgccggcggca 289 |||||||||||||||||||| Sbjct: 845062 cctcgtcctcgccggcggca 845081
>gb|AC008341.3| Drosophila melanogaster clone BACR15P11, complete sequence Length = 171235 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 gcgccaccgcctcctcctcc 69 |||||||||||||||||||| Sbjct: 46060 gcgccaccgcctcctcctcc 46041
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 tcctcgtcctcgccggcggc 288 |||||||||||||||||||| Sbjct: 1149420 tcctcgtcctcgccggcggc 1149439
>ref|XM_426717.1| PREDICTED: Gallus gallus similar to protein phosphatase 1 (formerly 2C)-like; protein phosphatase 2C epsilon (LOC429162), mRNA Length = 5013 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 agcgccaccgcctcctcctc 68 |||||||||||||||||||| Sbjct: 188 agcgccaccgcctcctcctc 169
>gb|BC058611.1| Mus musculus POU domain, class 2, associating factor 1, mRNA (cDNA clone MGC:60585 IMAGE:30077096), complete cds Length = 2565 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 ggagcaactgagaagaaagcgtgg 390 ||||| |||||||||||||||||| Sbjct: 164 ggagctactgagaagaaagcgtgg 187
>gb|AC023174.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-25N12, complete sequence Length = 223266 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 cctcacctcttccttccctt 28 |||||||||||||||||||| Sbjct: 172457 cctcacctcttccttccctt 172438
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 43 agcaccagcgccaccgcctcctcctccc 70 |||||||||||| | ||||||||||||| Sbjct: 18459294 agcaccagcgccgcggcctcctcctccc 18459267 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 ccaccgcctcctcctcccgccgcc 76 ||||| |||||||||||||||||| Sbjct: 1731229 ccaccacctcctcctcccgccgcc 1731252
>gb|AC125291.3| Drosophila melanogaster X BAC CH221-17A11 (CHORI Sheared BAC Drosophila melanogaster library) complete sequence Length = 166613 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccaccgcctcctcctcccgc 72 |||||||||||||||||||| Sbjct: 162201 ccaccgcctcctcctcccgc 162182
>ref|XM_843060.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0458) partial mRNA Length = 4542 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 cctcgtcctcgccggcggca 289 |||||||||||||||||||| Sbjct: 832 cctcgtcctcgccggcggca 813
>emb|AJ884584.1| Sporisorium reilianum Fot1 family transposon nat1 gene (partial), c1d1 gene (partial), bW2 gene and bE2 gene Length = 8963 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 43 agcaccagcgccaccgcctcctcctccc 70 |||| ||||||||||||||| ||||||| Sbjct: 630 agcagcagcgccaccgcctcatcctccc 603
>emb|AJ884583.1| Sporisorium reilianum Fot1 family transposon, nat1 gene (partial), c1d1 gene (partial), bW1 gene and bE1 gene Length = 8967 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 43 agcaccagcgccaccgcctcctcctccc 70 |||| ||||||||||||||| ||||||| Sbjct: 630 agcagcagcgccaccgcctcatcctccc 603
>gb|AC124699.4| Mus musculus BAC clone RP24-187B13 from chromosome 1, complete sequence Length = 177793 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 ggagcaactgagaagaaagc 386 |||||||||||||||||||| Sbjct: 26845 ggagcaactgagaagaaagc 26864
>ref|XM_805833.1| Trypanosoma cruzi strain CL Brener serine/threonine protein kinase (Tc00.1047053506691.90) partial mRNA Length = 548 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 cgctagcaccagcgccaccg 58 |||||||||||||||||||| Sbjct: 447 cgctagcaccagcgccaccg 428
>emb|CR726818.2|CNS0GNRC Tetraodon nigroviridis full-length cDNA Length = 1678 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 cgccaccgcctcctcctccc 70 |||||||||||||||||||| Sbjct: 915 cgccaccgcctcctcctccc 896
>emb|AL365504.33| Human DNA sequence from clone RP11-524I9 on chromosome 9 Contains the 5' end of the STRBP gene for spermatid perinuclear RNA binding protein (FLJ11307), the 5' end of a novel gene for a delta-notch-like protein (FLJ38464), a novel gene (PRO2206) and a CpG island, complete sequence Length = 154612 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 cgccaccgcctcctcctccc 70 |||||||||||||||||||| Sbjct: 151506 cgccaccgcctcctcctccc 151487
>ref|XM_965870.1| PREDICTED: Tribolium castaneum similar to RW1 protein (LOC659578), mRNA Length = 6700 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 accagcgccaccgcctcctcctcc 69 |||| ||||||||||||||||||| Sbjct: 1590 accaccgccaccgcctcctcctcc 1567
>ref|XM_963258.1| PREDICTED: Tribolium castaneum similar to CG9888-PA (LOC656751), mRNA Length = 1045 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 cgccaccgcctcctcctccc 70 |||||||||||||||||||| Sbjct: 151 cgccaccgcctcctcctccc 132
>emb|X02318.1|RNTHYR02 Rat mRNA fragment for thyroglobulin Length = 3018 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gttcctggagctggaggaga 319 |||||||||||||||||||| Sbjct: 2665 gttcctggagctggaggaga 2684
>emb|BX897699.1| Bartonella henselae strain Houston-1, complete genome Length = 1931047 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 46 accagcgccaccgcctcctcctcc 69 |||| ||||||||||||||||||| Sbjct: 387615 accaccgccaccgcctcctcctcc 387638
>emb|AL645639.17| Mouse DNA sequence from clone RP23-370G8 on chromosome 11 Contains a novel gene (LOC327917), the 5' end of the Adamts2 gene for a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif 2, two novel genes (4930579K21) and a CpG island, complete sequence Length = 188520 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 57 cgcctcctcctcccgccgccctcg 80 ||||||||||||||||| |||||| Sbjct: 55866 cgcctcctcctcccgcctccctcg 55889
>dbj|AK061868.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-H11, full insert sequence Length = 1130 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 cgccaccgcctcctcctccc 70 |||||||||||||||||||| Sbjct: 58 cgccaccgcctcctcctccc 77
>gb|AC116021.5| Homo sapiens chromosome 11, clone CTD-2589M5, complete sequence Length = 167757 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ccctcacctcttccttccct 27 |||||||||||||||||||| Sbjct: 66425 ccctcacctcttccttccct 66444
>gb|AC113619.5| Drosophila melanogaster X BAC RP98-22D21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160001 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 cgccaccgcctcctcctccc 70 |||||||||||||||||||| Sbjct: 36416 cgccaccgcctcctcctccc 36435
>gb|AC023723.4| Drosophila melanogaster X BAC RP98-48E6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179363 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccaccgcctcctcctcccgc 72 |||||||||||||||||||| Sbjct: 25458 ccaccgcctcctcctcccgc 25439
>gb|AC023709.4| Drosophila melanogaster X BAC RP98-10I17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163710 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccaccgcctcctcctcccgc 72 |||||||||||||||||||| Sbjct: 123505 ccaccgcctcctcctcccgc 123486
>gb|AC023710.5| Drosophila melanogaster X BAC RP98-19D3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 189976 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 cgccaccgcctcctcctccc 70 |||||||||||||||||||| Sbjct: 49817 cgccaccgcctcctcctccc 49798
>gb|AC117411.3| Homo sapiens 3 BAC RP11-55O2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 124524 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 ttcctggagctggaggagat 320 |||||||||||||||||||| Sbjct: 107810 ttcctggagctggaggagat 107829
>gb|AC098693.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1004C08, complete sequence Length = 133090 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 53 ccaccgcctcctcctcccgccgcc 76 ||||| |||||||||||||||||| Sbjct: 103133 ccaccacctcctcctcccgccgcc 103110
>ref|NM_143705.2| Drosophila melanogaster Spt6 CG12225-RA (Spt6), mRNA Length = 6151 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 cgccaccgcctcctcctccc 70 |||||||||||||||||||| Sbjct: 5179 cgccaccgcctcctcctccc 5160
>ref|NM_136634.2| Drosophila melanogaster Rep2 CG1975-RA (Rep2), mRNA Length = 5230 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 gcgccaccgcctcctcctcc 69 |||||||||||||||||||| Sbjct: 1453 gcgccaccgcctcctcctcc 1434
>ref|NM_132412.1| Drosophila melanogaster CG9817-RA (CG9817), mRNA Length = 6497 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccaccgcctcctcctcccgc 72 |||||||||||||||||||| Sbjct: 4490 ccaccgcctcctcctcccgc 4471
>dbj|AK135080.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430575J05 product:POU domain, class 2, associating factor 1, full insert sequence Length = 2562 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 ggagcaactgagaagaaagcgtgg 390 ||||| |||||||||||||||||| Sbjct: 184 ggagctactgagaagaaagcgtgg 207
>gb|AY060400.1| Drosophila melanogaster LD32009 full length cDNA Length = 5216 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 gcgccaccgcctcctcctcc 69 |||||||||||||||||||| Sbjct: 1423 gcgccaccgcctcctcctcc 1404
>gb|AY052030.1| Drosophila melanogaster LD47893 full length cDNA Length = 4784 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 cgccaccgcctcctcctccc 70 |||||||||||||||||||| Sbjct: 3890 cgccaccgcctcctcctccc 3871
>gb|AC160052.2| Mus musculus BAC clone RP24-173L14 from chromosome 9, complete sequence Length = 154436 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 367 ggagcaactgagaagaaagcgtgg 390 ||||| |||||||||||||||||| Sbjct: 66597 ggagctactgagaagaaagcgtgg 66574
>gb|AC136213.2| Leishmania major strain Friedlin chromosome 27 clone LB02059, complete sequence Length = 102826 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 cctcgtcctcgccggcggca 289 |||||||||||||||||||| Sbjct: 99885 cctcgtcctcgccggcggca 99904
>dbj|AK088587.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430020O13 product:POU domain, class 2, associating factor 1, full insert sequence Length = 2568 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 ggagcaactgagaagaaagcgtgg 390 ||||| |||||||||||||||||| Sbjct: 183 ggagctactgagaagaaagcgtgg 206
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 ccaccgcctcctcctcccgccgcc 76 ||||| |||||||||||||||||| Sbjct: 2115298 ccaccacctcctcctcccgccgcc 2115321
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 43 agcaccagcgccaccgcctcctcctccc 70 |||||||||||| | ||||||||||||| Sbjct: 18453335 agcaccagcgccgcggcctcctcctccc 18453308 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 ccaccgcctcctcctcccgccgcc 76 ||||| |||||||||||||||||| Sbjct: 1731227 ccaccacctcctcctcccgccgcc 1731250
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 tcctcgtcctcgccggcggc 288 |||||||||||||||||||| Sbjct: 34929223 tcctcgtcctcgccggcggc 34929204 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gcgccaccgcctcctcctcc 69 |||||||||||||||||||| Sbjct: 26119255 gcgccaccgcctcctcctcc 26119274 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 cgccaccgcctcctcctccc 70 |||||||||||||||||||| Sbjct: 12085193 cgccaccgcctcctcctccc 12085212 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 ccgcctcctcctcccgccgccctc 79 |||||||||||||| ||||||||| Sbjct: 11179237 ccgcctcctcctccagccgccctc 11179260
>gb|AF325198.1|AF325198 Triticum aestivum LRR14 (Lrr14), TAK14 (TAK14), and LRK14 (Lrk14) genes, complete cds; and unknown gene Length = 43606 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 cctcctcctcccgccgccct 78 |||||||||||||||||||| Sbjct: 13436 cctcctcctcccgccgccct 13417
>gb|AC097709.3| Homo sapiens BAC clone RP11-19B4 from 4, complete sequence Length = 160741 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 gaatgaccagaagaacaaga 409 |||||||||||||||||||| Sbjct: 28259 gaatgaccagaagaacaaga 28240
>gb|AF221622.1|AF221622 Rattus norvegicus strain F344 thyroglobulin mRNA, complete cds Length = 8405 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gttcctggagctggaggaga 319 |||||||||||||||||||| Sbjct: 8082 gttcctggagctggaggaga 8101
>gb|AC060755.9|AC060755 Oryza sativa chromosome 10 BAC OSJNBa0003O19 genomic sequence, complete sequence Length = 172427 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gcgccaccgcctcctcctcc 69 |||||||||||||||||||| Sbjct: 127898 gcgccaccgcctcctcctcc 127917
>gb|AC027601.25| Homo sapiens chromosome 17, clone RP11-455O6, complete sequence Length = 192732 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 ctcctcccgccgccctcggt 82 |||||||||||||||||||| Sbjct: 70595 ctcctcccgccgccctcggt 70576
>gb|AC097367.3| Oryza sativa chromosome 3 BAC OSJNBa0051C19 genomic sequence, complete sequence Length = 90673 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 43 agcaccagcgccaccgcctcctcctccc 70 |||||||||||| | ||||||||||||| Sbjct: 21921 agcaccagcgccgcggcctcctcctccc 21948
>ref|XM_578731.1| PREDICTED: Rattus norvegicus similar to Oct binding factor 1 (LOC503206), mRNA Length = 1074 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 ggagcaactgagaagaaagcgtgg 390 ||||| |||||||||||||||||| Sbjct: 168 ggagctactgagaagaaagcgtgg 191
>ref|XM_230873.3| PREDICTED: Rattus norvegicus similar to P-Rex1 (predicted) (LOC311647), mRNA Length = 6315 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ccagcgccaccgcctcctcc 66 |||||||||||||||||||| Sbjct: 1945 ccagcgccaccgcctcctcc 1926
>dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0041F13 Length = 163230 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 ccaccgcctcctcctcccgccgcc 76 ||||| |||||||||||||||||| Sbjct: 136160 ccaccacctcctcctcccgccgcc 136183
>dbj|AP005840.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0050F10 Length = 151986 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 53 ccaccgcctcctcctcccgccgcc 76 ||||| |||||||||||||||||| Sbjct: 33169 ccacctcctcctcctcccgccgcc 33146
>dbj|AP004868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0048B08 Length = 146874 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gcgccaccgcctcctcctcc 69 |||||||||||||||||||| Sbjct: 16082 gcgccaccgcctcctcctcc 16101
>dbj|AP004839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519A12 Length = 156676 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gcgccaccgcctcctcctcc 69 |||||||||||||||||||| Sbjct: 126701 gcgccaccgcctcctcctcc 126720
>dbj|AP005587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0499G10 Length = 158375 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gcgccaccgcctcctcctcc 69 |||||||||||||||||||| Sbjct: 87008 gcgccaccgcctcctcctcc 87027
>dbj|AP005578.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1695_A02 Length = 156214 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gcgccaccgcctcctcctcc 69 |||||||||||||||||||| Sbjct: 9494 gcgccaccgcctcctcctcc 9513
>dbj|BS000121.1| Pan troglodytes chromosome 22 clone:RP43-058I16, map 22, complete sequences Length = 147114 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 tgggagcaactgagaagaaa 384 |||||||||||||||||||| Sbjct: 135961 tgggagcaactgagaagaaa 135942
>dbj|AP004120.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1293_E04 Length = 118192 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 tcctcgtcctcgccggcggc 288 |||||||||||||||||||| Sbjct: 88720 tcctcgtcctcgccggcggc 88701
>dbj|AP003988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1057_D08 Length = 119557 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 ccgcctcctcctcccgccgccctc 79 |||||||||||||| ||||||||| Sbjct: 98416 ccgcctcctcctccagccgccctc 98439
>dbj|AP005476.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0026D20 Length = 130634 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 cgccaccgcctcctcctccc 70 |||||||||||||||||||| Sbjct: 33498 cgccaccgcctcctcctccc 33517
>dbj|AK120625.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152M06, full insert sequence Length = 2886 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 43 agcaccagcgccaccgcctcctcctccc 70 |||||||||||| | ||||||||||||| Sbjct: 191 agcaccagcgccgcggcctcctcctccc 218
>dbj|AK111742.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050K14, full insert sequence Length = 1623 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 gcgccaccgcctcctcctcc 69 |||||||||||||||||||| Sbjct: 263 gcgccaccgcctcctcctcc 244
>ref|XM_319526.2| Anopheles gambiae str. PEST ENSANGP00000017780 (ENSANGG00000015291), partial mRNA Length = 1041 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 ccagcgccaccgcctcctcc 66 |||||||||||||||||||| Sbjct: 1007 ccagcgccaccgcctcctcc 1026
>gb|AY037858.1| Cercopithicine herpesvirus 15 strain LCL8664, complete genome Length = 171096 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 cgccaccgcctcctcctccc 70 |||||||||||||||||||| Sbjct: 53133 cgccaccgcctcctcctccc 53152
>dbj|AK105777.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-F09, full insert sequence Length = 1539 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gcgccaccgcctcctcctcc 69 |||||||||||||||||||| Sbjct: 430 gcgccaccgcctcctcctcc 449
>dbj|AK103308.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125F08, full insert sequence Length = 2567 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 ccgcctcctcctcccgccgccctc 79 |||||||||||||| ||||||||| Sbjct: 53 ccgcctcctcctccagccgccctc 76
>dbj|AK100368.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084A02, full insert sequence Length = 3241 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 53 ccaccgcctcctcctcccgccgcc 76 ||||| |||||||||||||||||| Sbjct: 257 ccaccacctcctcctcccgccgcc 234
>dbj|AK070997.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077I17, full insert sequence Length = 1726 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 43 agcaccagcgccaccgcctcctcctccc 70 |||||||||||| | ||||||||||||| Sbjct: 163 agcaccagcgccgcggcctcctcctccc 190
>gb|AF104401.1|AF104401 Drosophila melanogaster SPT6 protein gene, complete cds Length = 12177 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 cgccaccgcctcctcctccc 70 |||||||||||||||||||| Sbjct: 9003 cgccaccgcctcctcctccc 8984
>gb|AF104400.1|AF104400 Drosophila melanogaster SPT6 protein mRNA, complete cds Length = 6176 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 cgccaccgcctcctcctccc 70 |||||||||||||||||||| Sbjct: 5188 cgccaccgcctcctcctccc 5169
>dbj|AK068535.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151B22, full insert sequence Length = 1489 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gcgccaccgcctcctcctcc 69 |||||||||||||||||||| Sbjct: 405 gcgccaccgcctcctcctcc 424
>dbj|AK066382.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013064K05, full insert sequence Length = 1591 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 tcctcgtcctcgccggcggc 288 |||||||||||||||||||| Sbjct: 88 tcctcgtcctcgccggcggc 107
>dbj|AK065622.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013031K22, full insert sequence Length = 3102 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 ccaccgcctcctcctcccgccgcc 76 ||||| |||||||||||||||||| Sbjct: 89 ccacctcctcctcctcccgccgcc 112
>dbj|AK065304.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002O01, full insert sequence Length = 1318 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 cgccaccgcctcctcctccc 70 |||||||||||||||||||| Sbjct: 83 cgccaccgcctcctcctccc 102
>dbj|AK061377.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-G08, full insert sequence Length = 1467 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 gcgccaccgcctcctcctcc 69 |||||||||||||||||||| Sbjct: 358 gcgccaccgcctcctcctcc 377
>gb|AY104991.1| Zea mays PCO102374 mRNA sequence Length = 651 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 43 agcaccagcgccaccgcctcctcctccc 70 |||| ||||||| ||||||||||||||| Sbjct: 263 agcagcagcgcccccgcctcctcctccc 236
>gb|AE003834.3| Drosophila melanogaster chromosome 2R, section 16 of 73 of the complete sequence Length = 243313 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 gcgccaccgcctcctcctcc 69 |||||||||||||||||||| Sbjct: 232982 gcgccaccgcctcctcctcc 232963
>emb|AL139022.4|CNS01DX4 Human chromosome 14 DNA sequence BAC R-840I19 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 190517 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 acccaaaccctcacctcttccttc 24 |||||| ||||||||||||||||| Sbjct: 5610 acccaagccctcacctcttccttc 5587
>gb|AE003451.5| Drosophila melanogaster chromosome X, section 35 of 74 of the complete sequence Length = 285729 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ccaccgcctcctcctcccgc 72 |||||||||||||||||||| Sbjct: 119241 ccaccgcctcctcctcccgc 119260
>gb|AE003437.3| Drosophila melanogaster chromosome X, section 21 of 74 of the complete sequence Length = 305376 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 cgccaccgcctcctcctccc 70 |||||||||||||||||||| Sbjct: 39676 cgccaccgcctcctcctccc 39657
>emb|AL355076.5|CNS05TCA Human chromosome 14 DNA sequence BAC C-2509G16 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 215936 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 acccaaaccctcacctcttccttc 24 |||||| ||||||||||||||||| Sbjct: 6146 acccaagccctcacctcttccttc 6169
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 ccgcctcctcctcccgccgc 75 |||||||||||||||||||| Sbjct: 3804608 ccgcctcctcctcccgccgc 3804589
>gb|U43788.1|MMU43788 Mus musculus Oct binding factor 1 (OBF-1) mRNA, complete cds Length = 2578 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 ggagcaactgagaagaaagcgtgg 390 ||||| |||||||||||||||||| Sbjct: 183 ggagctactgagaagaaagcgtgg 206
>ref|NM_030988.1| Rattus norvegicus thyroglobulin (Tg), mRNA Length = 8461 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gttcctggagctggaggaga 319 |||||||||||||||||||| Sbjct: 8108 gttcctggagctggaggaga 8127
>ref|NM_011136.1| Mus musculus POU domain, class 2, associating factor 1 (Pou2af1), mRNA Length = 2578 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 ggagcaactgagaagaaagcgtgg 390 ||||| |||||||||||||||||| Sbjct: 183 ggagctactgagaagaaagcgtgg 206
>emb|Z54283.1|MMBOBOBF1 M.musculus mRNA for B-cell-specific coactivator BOB.1/OBF.1 Length = 2580 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 ggagcaactgagaagaaagcgtgg 390 ||||| |||||||||||||||||| Sbjct: 186 ggagctactgagaagaaagcgtgg 209
>dbj|AB035201.1| Rattus norvegicus mRNA for thyroglobulin, complete cds Length = 8461 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gttcctggagctggaggaga 319 |||||||||||||||||||| Sbjct: 8108 gttcctggagctggaggaga 8127
>dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, clone:P0043E01 Length = 154128 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 ccaccgcctcctcctcccgccgcc 76 ||||| |||||||||||||||||| Sbjct: 143692 ccaccacctcctcctcccgccgcc 143715 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,528,893 Number of Sequences: 3902068 Number of extensions: 4528893 Number of successful extensions: 130247 Number of sequences better than 10.0: 180 Number of HSP's better than 10.0 without gapping: 188 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 127646 Number of HSP's gapped (non-prelim): 2599 length of query: 412 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 390 effective length of database: 17,147,199,772 effective search space: 6687407911080 effective search space used: 6687407911080 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
