Clone Name | bastl46b11 |
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Clone Library Name | barley_pub |
>XYLT1_PANTR (Q5QQ57) Xylosyltransferase 1 (EC 2.4.2.26) (Xylosyltransferase I)| (Peptide O-xylosyltransferase 1) Length = 945 Score = 32.3 bits (72), Expect = 0.36 Identities = 18/39 (46%), Positives = 18/39 (46%) Frame = -2 Query: 125 RREDATAGGGVHPTPAPRDERASSVGEGGGARPVDGEVG 9 RR A GGG P PAPR ER E AR G G Sbjct: 45 RRGGAAVGGGEQPPPAPRRERRDLPAEPAAARGGGGGGG 83
>CUTL2_HUMAN (O14529) Homeobox protein cut-like 2 (Homeobox protein Cux-2)| (Cut-like 2) Length = 1424 Score = 32.0 bits (71), Expect = 0.47 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = +1 Query: 4 AEPTSPSTGRAPPPSPTELARSSR 75 A PT P + +PPPSPTE +SS+ Sbjct: 914 ASPTEPRSSPSPPPSPTEPEKSSQ 937
>CUTL2_MOUSE (P70298) Homeobox protein cut-like 2 (Homeobox protein Cux-2)| (Cut-like 2) Length = 1426 Score = 31.6 bits (70), Expect = 0.61 Identities = 12/24 (50%), Positives = 18/24 (75%) Frame = +1 Query: 4 AEPTSPSTGRAPPPSPTELARSSR 75 A PT P++ +PPPSPTE ++S+ Sbjct: 921 ASPTEPTSSPSPPPSPTEPEKTSQ 944
>RT65_MYXXA (P23071) RNA-directed DNA polymerase from retron Mx65 (EC 2.7.7.49)| (Reverse transcriptase) (Mx65-RT) Length = 427 Score = 31.2 bits (69), Expect = 0.80 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = +3 Query: 12 HLAVDRPGAPPLPYGTRPLVSRRRRWMDAASCCRVFS 122 HL R A LP G R R++WM+AA R+FS Sbjct: 54 HLRQVRRDARLLPKGVRRYTPGRKKWMEAAEARRLFS 90
>PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 940 Score = 29.3 bits (64), Expect = 3.0 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = -2 Query: 104 GGGVHPTPAPRDERASSVGEGGGARPVDGEVG 9 GGG+ P + A S+G GGG RP +G G Sbjct: 774 GGGMGSGHRPHEGPAGSMGGGGGHRPHEGPGG 805
>INSM1_MOUSE (Q63ZV0) Insulinoma-associated protein 1 (Zinc finger protein IA-1)| Length = 521 Score = 28.9 bits (63), Expect = 4.0 Identities = 13/26 (50%), Positives = 14/26 (53%) Frame = +1 Query: 4 AEPTSPSTGRAPPPSPTELARSSRGA 81 AEP PS G PPP P LA + A Sbjct: 41 AEPPVPSPGPLPPPPPPALAERAHAA 66
>TGM1_RAT (P23606) Protein-glutamine gamma-glutamyltransferase K (EC| 2.3.2.13) (Transglutaminase K) (TGase K) (TGK) (TG(K)) (Transglutaminase-1) (Epidermal TGase) Length = 824 Score = 28.9 bits (63), Expect = 4.0 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +1 Query: 7 EPTSPSTGRAPPPSPTELARSSRGAG 84 +PT+PS P P P +RS RG G Sbjct: 17 QPTTPSPEPEPEPEPDRSSRSRRGGG 42
>TGM1_MOUSE (Q9JLF6) Protein-glutamine gamma-glutamyltransferase K (EC| 2.3.2.13) (Transglutaminase K) (TGase K) (TGK) (TG(K)) (Transglutaminase-1) (Epidermal TGase) Length = 815 Score = 28.1 bits (61), Expect = 6.8 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = +1 Query: 10 PTSPSTGRAPPPSPTELARSSRGAG 84 PT+PS P P P +RS RG G Sbjct: 19 PTTPSPEPEPEPEPDRRSRSRRGGG 43
>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (Phosphatase 1 nuclear targeting subunit) (MHC class I region proline-rich protein CAT53) (FB19 protein) (PP1-binding protein of 114 kDa) (p99) Length = 940 Score = 27.7 bits (60), Expect = 8.9 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = -2 Query: 104 GGGVHPTPAPRDERASSVGEGGGARPVDGEVG 9 GGG+ P + S+G GGG RP +G G Sbjct: 774 GGGMGSGHRPHEGPGGSMGGGGGHRPHEGPGG 805
>ENL_HUMAN (Q03111) Protein ENL| Length = 559 Score = 27.7 bits (60), Expect = 8.9 Identities = 13/25 (52%), Positives = 14/25 (56%) Frame = +1 Query: 7 EPTSPSTGRAPPPSPTELARSSRGA 81 E TSP+ G PPP P A S R A Sbjct: 264 ESTSPNPGPPPPPPPPPRASSKRPA 288
>XYLT1_HUMAN (Q86Y38) Xylosyltransferase 1 (EC 2.4.2.26) (Xylosyltransferase I)| (XylT-I) (XT-I) (Peptide O-xylosyltransferase 1) Length = 959 Score = 27.7 bits (60), Expect = 8.9 Identities = 18/41 (43%), Positives = 18/41 (43%), Gaps = 2/41 (4%) Frame = -2 Query: 125 RREDATAGGGVH--PTPAPRDERASSVGEGGGARPVDGEVG 9 RR A GGG P PAPR ER E AR G G Sbjct: 45 RRGGAAVGGGEQPPPAPAPRRERRDLPAEPAAARGGGGGGG 85
>5HTR_BOMMO (Q17239) 5-hydroxytryptamine receptor (5-HT receptor) (Serotonin| receptor) Length = 446 Score = 27.7 bits (60), Expect = 8.9 Identities = 14/30 (46%), Positives = 15/30 (50%) Frame = -2 Query: 125 RREDATAGGGVHPTPAPRDERASSVGEGGG 36 RR ATA GGV P P P + G GG Sbjct: 255 RRRGATARGGVGPPPVPAGGALVAGGGSGG 284 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.313 0.132 0.468 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,300,928 Number of Sequences: 219361 Number of extensions: 307559 Number of successful extensions: 2098 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1831 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2092 length of database: 80,573,946 effective HSP length: 32 effective length of database: 73,554,394 effective search space used: 1765305456 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)