>ref|XM_468081.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3585

 Score =  123 bits (62), Expect = 2e-25
 Identities = 71/74 (95%)
 Strand = Plus / Plus

                                                                       
Query: 83  gcgttggatggacgccgcctcctgctgtcgcgtcttctcgacgcagagatgccgcttccc 142
           |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 130 gcgtcggatggacgccgcctcctgctgccgcgtcttctcgacgcagagatgccgcttccc 189

                         
Query: 143 gctgcgcaggctgg 156
           |||||| |||||||
Sbjct: 190 gctgcggaggctgg 203

>dbj|AK065948.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013046B21, full
           insert sequence
          Length = 3585

 Score =  123 bits (62), Expect = 2e-25
 Identities = 71/74 (95%)
 Strand = Plus / Plus

                                                                       
Query: 83  gcgttggatggacgccgcctcctgctgtcgcgtcttctcgacgcagagatgccgcttccc 142
           |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 130 gcgtcggatggacgccgcctcctgctgccgcgtcttctcgacgcagagatgccgcttccc 189

                         
Query: 143 gctgcgcaggctgg 156
           |||||| |||||||
Sbjct: 190 gctgcggaggctgg 203

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 42/43 (97%)
 Strand = Plus / Plus

                                                           
Query: 114      gtcttctcgacgcagagatgccgcttcccgctgcgcaggctgg 156
                ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 32952930 gtcttctcgacgcagagatgccgcttcccgctgcggaggctgg 32952972



 Score = 50.1 bits (25), Expect = 0.002
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                 
Query: 83       gcgttggatggacgccgcctcctgctgtcgcgt 115
                |||| |||||||||||||||||||||| |||||
Sbjct: 32952785 gcgtcggatggacgccgcctcctgctgccgcgt 32952817



 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 60       cgcccgctcgtctcgcggcg 79
                ||||||||||||||||||||
Sbjct: 28485945 cgcccgctcgtctcgcggcg 28485964

>dbj|AP004140.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1534_E09
          Length = 126209

 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 42/43 (97%)
 Strand = Plus / Plus

                                                         
Query: 114    gtcttctcgacgcagagatgccgcttcccgctgcgcaggctgg 156
              ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 107671 gtcttctcgacgcagagatgccgcttcccgctgcggaggctgg 107713



 Score = 50.1 bits (25), Expect = 0.002
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                               
Query: 83     gcgttggatggacgccgcctcctgctgtcgcgt 115
              |||| |||||||||||||||||||||| |||||
Sbjct: 107526 gcgtcggatggacgccgcctcctgctgccgcgt 107558

>gb|AE011625.1| Xanthomonas axonopodis pv. citri str. 306,  section 3 of 469 of the
            complete genome
          Length = 10597

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 141  ccgctgcgcaggctgggggcgg 162
            ||||||||||||||||||||||
Sbjct: 6637 ccgctgcgcaggctgggggcgg 6616

>ref|XM_512193.1| PREDICTED: Pan troglodytes similar to RNA (guanine-7-)
           methyltransferase (LOC455501), mRNA
          Length = 1697

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 133 gccgcttcccgctgcgcaggctgg 156
           |||||||||||| |||||||||||
Sbjct: 284 gccgcttcccgccgcgcaggctgg 307

>ref|NM_152352.1| Homo sapiens chromosome 18 open reading frame 19 (C18orf19), mRNA
          Length = 1941

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 133 gccgcttcccgctgcgcaggctgg 156
           |||||||||||| |||||||||||
Sbjct: 207 gccgcttcccgccgcgcaggctgg 184

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 10       cccacctcgccgtcgaccgg 29
                ||||||||||||||||||||
Sbjct: 13136655 cccacctcgccgtcgaccgg 13136674

>gb|AC135257.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1113A07,
             from chromosome 3, complete sequence
          Length = 151173

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    cccacctcgccgtcgaccgg 29
             ||||||||||||||||||||
Sbjct: 89983 cccacctcgccgtcgaccgg 89964

>emb|CR857634.1| Pongo pygmaeus mRNA; cDNA DKFZp459K1526 (from clone DKFZp459K1526)
          Length = 4396

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 133 gccgcttcccgctgcgcaggctgg 156
           |||||||||||| |||||||||||
Sbjct: 229 gccgcttcccgccgcgcaggctgg 206

>dbj|AK055618.1| Homo sapiens cDNA FLJ31056 fis, clone HSYRA2000760
          Length = 1941

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 133 gccgcttcccgctgcgcaggctgg 156
           |||||||||||| |||||||||||
Sbjct: 207 gccgcttcccgccgcgcaggctgg 184

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 10       cccacctcgccgtcgaccgg 29
                ||||||||||||||||||||
Sbjct: 13133430 cccacctcgccgtcgaccgg 13133449

>dbj|AP004118.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1148_D05
          Length = 155146

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 60     cgcccgctcgtctcgcggcg 79
              ||||||||||||||||||||
Sbjct: 110066 cgcccgctcgtctcgcggcg 110085

>dbj|AP004786.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0017H11
          Length = 158374

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    cgcccgctcgtctcgcggcg 79
             ||||||||||||||||||||
Sbjct: 54786 cgcccgctcgtctcgcggcg 54805

>dbj|AP001525.6| Homo sapiens genomic DNA, chromosome 18 clone:RP11-720L3, complete
             sequence
          Length = 175581

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 133   gccgcttcccgctgcgcaggctgg 156
             |||||||||||| |||||||||||
Sbjct: 64085 gccgcttcccgccgcgcaggctgg 64108

>ref|XM_752528.1| Ustilago maydis 521 hypothetical protein (UM01474.1) partial mRNA
          Length = 5145

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 73   cgcggcgccggcgttggat 91
            |||||||||||||||||||
Sbjct: 3219 cgcggcgccggcgttggat 3237

>ref|XM_745712.1| Aspergillus fumigatus Af293 3-methyl-2-oxobutanoate
           hydroxymethyltransferase (Afu6g09170) partial mRNA
          Length = 1068

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 152 gctgggggcggcgccggtg 170
           |||||||||||||||||||
Sbjct: 180 gctgggggcggcgccggtg 198

>emb|Z98743.1|HS181C9 Human DNA sequence from clone RP1-181C9 on chromosome 22q13.2-13.33,
             complete sequence
          Length = 92472

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 144   ctgcgcaggctgggggcggcgcc 166
             |||||||||||| ||||||||||
Sbjct: 37586 ctgcgcaggctgtgggcggcgcc 37564

>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 141     ccgctgcgcaggctggggg 159
               |||||||||||||||||||
Sbjct: 2590801 ccgctgcgcaggctggggg 2590783

>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 12      cacctcgccgtcgaccggc 30
               |||||||||||||||||||
Sbjct: 2337746 cacctcgccgtcgaccggc 2337728

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 11      ccacctcgccgtcgaccggccgg 33
               |||||||||||||||||| ||||
Sbjct: 3628069 ccacctcgccgtcgaccgcccgg 3628047

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 61      gcccgctcgtctcgcggcgccgg 83
               ||||||||| |||||||||||||
Sbjct: 5889748 gcccgctcggctcgcggcgccgg 5889770

>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 13      acctcgccgtcgaccggcc 31
               |||||||||||||||||||
Sbjct: 2349556 acctcgccgtcgaccggcc 2349538

>dbj|AB070940.1| Streptomyces avermitilis oligomycin biosynthetic gene cluster
          Length = 104326

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 11   ccacctcgccgtcgaccggccgg 33
            |||||||||||||||||| ||||
Sbjct: 9736 ccacctcgccgtcgaccgcccgg 9758


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 877,838
Number of Sequences: 3902068
Number of extensions: 877838
Number of successful extensions: 65367
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64307
Number of HSP's gapped (non-prelim): 1060
length of query: 171
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 149
effective length of database: 17,147,199,772
effective search space: 2554932766028
effective search space used: 2554932766028
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)