>ECM29_MOUSE (Q6PDI5) Proteasome-associated protein ECM29 homolog (Ecm29)|
          Length = 1840

 Score = 81.6 bits (200), Expect = 8e-16
 Identities = 41/98 (41%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
 Frame = +1

Query: 148 DALDRMLTRLALAE-DGRLAPLLARVLPYAITSFASTSTSVRKLAMEILSHINKRVKHRP 324
           D L+R+  RL  AE D +L  ++++ LP  +   +ST   VRK  ME+L H+NKR+K RP
Sbjct: 8   DQLERVFLRLGHAETDEQLQNIISKFLPPVLLKLSSTQEGVRKKVMELLVHLNKRIKSRP 67

Query: 325 EVSLPMLDLWKIYTESASTSIVRNFCIVYIEMAFERLP 438
           ++ LP+  L   Y + A+ S V NF I+Y++M + RLP
Sbjct: 68  KIQLPVETLLVQYQDPAAVSFVTNFTIIYVKMGYPRLP 105

>ECM29_HUMAN (Q5VYK3) Proteasome-associated protein ECM29 homolog (Ecm29)|
          Length = 1845

 Score = 79.7 bits (195), Expect = 3e-15
 Identities = 40/96 (41%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
 Frame = +1

Query: 154 LDRMLTRLALAE-DGRLAPLLARVLPYAITSFASTSTSVRKLAMEILSHINKRVKHRPEV 330
           L+R+  RL  AE D +L  ++++ LP  +   +ST   VRK  ME+L H+NKR+K RP++
Sbjct: 16  LERVFLRLGHAETDEQLQNIISKFLPPVLLKLSSTQEGVRKKVMELLVHLNKRIKSRPKI 75

Query: 331 SLPMLDLWKIYTESASTSIVRNFCIVYIEMAFERLP 438
            LP+  L   Y + A+ S V NF I+Y++M + RLP
Sbjct: 76  QLPVETLLVQYQDPAAVSFVTNFTIIYVKMGYPRLP 111

>ECM29_PONPY (Q5R6J0) Proteasome-associated protein ECM29 homolog (Ecm29)|
           (Fragment)
          Length = 1810

 Score = 68.6 bits (166), Expect = 7e-12
 Identities = 31/76 (40%), Positives = 48/76 (63%)
 Frame = +1

Query: 211 LARVLPYAITSFASTSTSVRKLAMEILSHINKRVKHRPEVSLPMLDLWKIYTESASTSIV 390
           +++ LP  +   +ST   VRK  ME+L H+NKR+K  P++ LP+  L   Y + A+ S V
Sbjct: 1   ISKFLPPVLLKLSSTQEGVRKKVMELLVHLNKRIKSPPKIQLPVETLLVQYQDPAAVSFV 60

Query: 391 RNFCIVYIEMAFERLP 438
            NF I+Y++M + RLP
Sbjct: 61  TNFTIIYVKMGYPRLP 76

>ECM29_DROME (Q9V677) Proteasome-associated protein ECM29 homolog|
          Length = 1890

 Score = 55.5 bits (132), Expect = 6e-08
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
 Frame = +1

Query: 148 DALDRMLTRLALAE-DGRLAPLLARVLPYAITSFASTSTSVRKLAMEILSHINKRVKHRP 324
           + L+R+L RL  A+ D +L   + + L   I    S    VR   +E+L+HI +R+  R 
Sbjct: 10  ELLERVLLRLGNADSDEKLEAAVGKFLTPVILKMNSPHNVVRTKVVEVLTHIKRRLSSRG 69

Query: 325 EVSLPMLDLWKIYTESASTSIVRNFCIVYIEMAFERL 435
            V +P+  L   Y    S++ ++NF I++I M F RL
Sbjct: 70  HVQIPVEALLDQYAAQDSSTFLKNFAIIFITMGFPRL 106

>YLK1_SCHPO (Q9P7H8) Hypothetical protein C1782.01 in chromosome I|
          Length = 1679

 Score = 33.9 bits (76), Expect = 0.18
 Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
 Frame = +1

Query: 172 RLALAE-DGRLAPLLARVLPYAITSFASTSTSVRKLAMEILSHINKRVKHRPEVSLPMLD 348
           +LALAE +     L++  L   +    S   SVR   + I +HI  R+ +  +  LP+  
Sbjct: 15  KLALAESEDSFQSLVSVFLCPILLKLDSPHESVRNKTISIANHIMTRLNNNAQAILPLEA 74

Query: 349 LWKIYTESASTSIVRNFCIVYIEMAFERLP 438
           L   Y E A+  + + F + +I +  +R+P
Sbjct: 75  LVSQYVE-ANQPLRKRFLLAFISIGEKRIP 103

>CLS2_CAEEL (P32744) Kinetochore protein CLASP-2|
          Length = 1020

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
 Frame = +1

Query: 160  RMLTRL--ALAEDGRLAPLLARVLPYAITSFASTSTSVRKLAME-ILSHINK-----RVK 315
            +M+TRL   L  D  L+P++  + P  I S+ S S++VRK A+  +++ +NK        
Sbjct: 933  KMMTRLFEGLQAD-ELSPVVDDLAPCVIKSYDSPSSAVRKTAVYCLVAMVNKLGMKTMEP 991

Query: 316  HRPEVSLPMLDLWKIYTESASTS 384
            H   +S   L+L ++Y   A +S
Sbjct: 992  HLQNLSSGKLNLVQVYVNRAMSS 1014

>SPEB1_SYNY3 (P72703) Agmatinase 1 (EC 3.5.3.11) (Agmatine ureohydrolase 1) (AUH|
           1)
          Length = 306

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = +1

Query: 232 AITSFASTSTSVRKLAMEILSHINKRVKHRPEVSLPMLDLWKIYTESASTS 384
           AITS+A  +  V  +  E  +   K  +H PE  L   D  + Y E   TS
Sbjct: 19  AITSYADAAVVVVPIPYEATTSYRKGCEHGPEAVLEASDQLEAYDEELGTS 69

>Y1032_TREPA (O83995) Hypothetical protein TP1032|
          Length = 144

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 11/45 (24%)
 Frame = -2

Query: 109 TAPPSRAA-----------GCCVGLAQSPLVWSLPSGARRKGGAR 8
           T+PP+RAA           GCCV L  +   WS     R +GGAR
Sbjct: 11  TSPPNRAAAARGGRLTLLDGCCVALVLALTAWSGFFVYRMQGGAR 55

>SYG_MYCPA (Q73Y21) Glycyl-tRNA synthetase (EC 6.1.1.14) (Glycine--tRNA|
           ligase) (GlyRS)
          Length = 463

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 10/74 (13%)
 Frame = +1

Query: 148 DALDRMLTRLALAEDGRLAPLLARVLPYAITSFASTSTSVRKLAMEI----------LSH 297
           +A  +M  R  L  D RLAP+ A VLP  ++  A  S   R LA E+             
Sbjct: 348 NAKGKMEKRAVLRLDPRLAPVKAAVLP--LSRHADLSPKARDLAAELRRFWNIEFDDAGA 405

Query: 298 INKRVKHRPEVSLP 339
           I +R + + E+  P
Sbjct: 406 IGRRYRRQDEIGTP 419

>BIRC1_HUMAN (Q13075) Baculoviral IAP repeat-containing protein 1 (Neuronal|
           apoptosis inhibitory protein)
          Length = 1403

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 14/56 (25%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
 Frame = +1

Query: 271 KLAMEILSHINKRVKHRPEVSLPM---LDLWKIYTESASTSIVRNFCIVYIEMAFE 429
           K ++E +S  +  +KH+PE+SL M     LW+I  ++  + +  +  ++ ++ A++
Sbjct: 818 KESLENISENDDYLKHQPEISLQMQLLRGLWQICPQAYFSMVSEHLLVLALKTAYQ 873

>ECM29_YEAST (P38737) Proteasome component ECM29 (Extracellular matrix protein|
           29)
          Length = 1868

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = +1

Query: 172 RLALAEDG-RLAPLLARVLPYAITSFASTSTSVRKLAMEILSHINKRVKHRPEVSLPM 342
           RLA+A+   +    L   LP  +   AS   SVR      L ++  R+   P+V LP+
Sbjct: 20  RLAIADSPQKFETNLQTFLPPLLLKLASPHASVRTAVFSALKNLISRINTLPQVQLPV 77


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,227,210
Number of Sequences: 219361
Number of extensions: 535467
Number of successful extensions: 1811
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1810
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)