>BEGIN_SHEEP (Q6R6L0) Brain-enriched guanylate kinase-associated protein|
          Length = 653

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 22/61 (36%), Positives = 28/61 (45%)
 Frame = -3

Query: 365 PVPFHPLRNXRGSTSACRMACSPCRSACAITTPSDAWPRAGDAECSRRTSSDSASMTPLL 186
           P P   LR+ R S     M  SP     A  +P  A+PRAG +  SR+ S   A +   L
Sbjct: 592 PEPELSLRSSRDSLEPSSMEASPEMHPGARLSPQPAFPRAGSSGLSRKDSLTKAQLYGTL 651

Query: 185 L 183
           L
Sbjct: 652 L 652

>5HT6R_RAT (P31388) 5-hydroxytryptamine 6 receptor (5-HT-6) (Serotonin|
           receptor 6) (ST-B17)
          Length = 436

 Score = 32.3 bits (72), Expect = 0.45
 Identities = 27/82 (32%), Positives = 28/82 (34%)
 Frame = -3

Query: 416 LPRAHLTPAHSPEQAPRPVPFHPLRNXRGSTSACRMACSPCRSACAITTPSDAWPRAGDA 237
           LP  H  P H P  A  P P  PL       SAC   C        I TP    PRA   
Sbjct: 335 LPCVHCPPEHRP--ALPPPPCGPLTAVPDQASACSRCCLCLCRQTQIQTPLQGAPRA--- 389

Query: 236 ECSRRTSSDSASMTPLLLLHTP 171
            CS + S       P    H P
Sbjct: 390 -CSSQPSFCCLERPPGTPRHPP 410

>PACC_YEAST (P33400) pH-response transcription factor pacC/RIM101 (pH-response|
           regulator protein RIM101) (Regulator of IME2 protein 1)
          Length = 625

 Score = 32.0 bits (71), Expect = 0.59
 Identities = 21/60 (35%), Positives = 28/60 (46%)
 Frame = -3

Query: 344 RNXRGSTSACRMACSPCRSACAITTPSDAWPRAGDAECSRRTSSDSASMTPLLLLHTPIG 165
           R   GSTS+   +C P  S   + TP      A     +  +SSDS+S +PL   H P G
Sbjct: 74  RMSPGSTSS---SCLPYHSTSHLNTPPYDLLGASAVSPTTSSSSDSSSSSPLAQAHNPAG 130

>Y1786_VIBCH (Q9KR57) Putative radC-like protein VC1786|
          Length = 158

 Score = 31.6 bits (70), Expect = 0.78
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -2

Query: 351 PAQEPPRVDQRLPDGLQPLQVRLRDHHAVGRLAAS 247
           P+Q   R+ QRL D L  + +R+ DH  VG+ + S
Sbjct: 117 PSQADRRITQRLKDALSLVDIRVLDHVVVGKSSVS 151

>HMEN_ANOGA (O02491) Segmentation polarity homeobox protein engrailed|
          Length = 596

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
 Frame = -3

Query: 386 SPEQAPRPVPFHPLRNXRGSTSACRMACSPCRSACAITTPSDAWPRAGDAECSRRTSSDS 207
           SP+ AP P   H       ST+   MA +    AC  TT + +   +G +  S  T  + 
Sbjct: 8   SPQSAPSPPHHHHSSQSPTSTTTVTMATASPVPACTTTTTTTS--TSGASAASSPTRDEM 65

Query: 206 ASMTPLLLLH---TPIGA 162
           + + P+  LH    P+G+
Sbjct: 66  SLVVPISPLHIKQEPLGS 83

>MDCB_PSEAE (Q9I6S9) Probable 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A|
           synthase (EC 2.7.8.25)
           (2-(5''-triphosphoribosyl)-3'-dephospho-CoA synthase)
          Length = 293

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 19/48 (39%), Positives = 21/48 (43%)
 Frame = +3

Query: 84  ASRVALGLDPGASGGSGRAWLAVT*YGTNGCVEEQ*WCHARAVTAGPP 227
           A R+AL  DP A+ G          YG  G  EE   C  RAV  G P
Sbjct: 139 AGRIALLDDPAAAIGDSHGERVRRRYGVGGAREEARLCFPRAVRHGLP 186

>MTB_SALAL (P68502) Metallothionein B (MT-B)|
          Length = 60

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 14/45 (31%), Positives = 18/45 (40%)
 Frame = -3

Query: 341 NXRGSTSACRMACSPCRSACAITTPSDAWPRAGDAECSRRTSSDS 207
           N  GS      AC+ C+ +C    PSD    A    C  +T   S
Sbjct: 13  NCGGSCKCSNCACTSCKKSCCPCCPSDCSKCASGCVCKGKTCDTS 57

>MTB_ONCMY (P68501) Metallothionein B (MT-B)|
          Length = 60

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 14/45 (31%), Positives = 18/45 (40%)
 Frame = -3

Query: 341 NXRGSTSACRMACSPCRSACAITTPSDAWPRAGDAECSRRTSSDS 207
           N  GS      AC+ C+ +C    PSD    A    C  +T   S
Sbjct: 13  NCGGSCKCSNCACTSCKKSCCPCCPSDCSKCASGCVCKGKTCDTS 57

>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2|
          Length = 1033

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = -3

Query: 413 PRAHLTPAHSPEQAPRPVPFHPLRNXRGSTSACRMACSPCRSACAIT-TPSDAWPRAGDA 237
           P A   PA +P Q PRP P  P    R + +A      P   A   T  P+ + P+ G A
Sbjct: 111 PAAPSAPAPAPSQGPRPTP-GPKPAPRPAPAAPEFTAPPAAPAAPSTPAPAPSGPKPGGA 169

>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1|
           precursor (EC 2.7.11.1) (BRI1-associated receptor kinase
           1) (Somatic embryogenesis receptor-like kinase 3)
          Length = 615

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +1

Query: 274 VIAQADLQGLQAIRQALVDPRXFLSGWNGTGLGACSGEWAGVKC 405
           V   A+   L A++ +L DP   L  W+ T +  C+  W  V C
Sbjct: 23  VSGNAEGDALSALKNSLADPNKVLQSWDATLVTPCT--WFHVTC 64

>VSIG2_MOUSE (Q9Z109) V-set and immunoglobulin domain-containing protein 2|
           precursor (CT-like protein) (Cortical thymocyte-like
           protein)
          Length = 328

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 15/41 (36%), Positives = 18/41 (43%)
 Frame = -3

Query: 359 PFHPLRNXRGSTSACRMACSPCRSACAITTPSDAWPRAGDA 237
           P HPL +  G TS    A   CRS+     P   W R G +
Sbjct: 146 PSHPLCSQSGQTSVGGSAALGCRSSEGAPKPVYNWERLGSS 186

>HXB13_MOUSE (P70321) Homeobox protein Hox-B13|
          Length = 286

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/64 (26%), Positives = 23/64 (35%)
 Frame = -3

Query: 410 RAHLTPAHSPEQAPRPVPFHPLRNXRGSTSACRMACSPCRSACAITTPSDAWPRAGDAEC 231
           + H  P      +P PVP+        S    R +  PC    A+ T     P  G+   
Sbjct: 63  QCHPCPGVPQGASPAPVPYGYFGGGYYSCRVSRSSLKPCAQTAALATYPSETPAPGEEYP 122

Query: 230 SRRT 219
           SR T
Sbjct: 123 SRPT 126

>JDP_DROME (Q9TVP3) J domain-containing protein (dJDP)|
          Length = 195

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +1

Query: 280 AQADLQGLQAIRQALVDP--RXFLSGWNGTGLGACSGEWAGVK 402
           A+A  Q L+  ++ L DP  R     W  +G+     +W G+K
Sbjct: 55  AEAKFQQLKEAKETLCDPEKRAIYDKWRNSGISMSYKQWLGMK 97

>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 20/72 (27%), Positives = 28/72 (38%)
 Frame = -3

Query: 413 PRAHLTPAHSPEQAPRPVPFHPLRNXRGSTSACRMACSPCRSACAITTPSDAWPRAGDAE 234
           P    +P   P ++P P   +  R  RGS S  R +    +S     +PS A P+   AE
Sbjct: 398 PSPPASPPPKPRRSPTPQQSNRARKSRGSVSPGRASAPKHKSTEKRESPSPA-PKPRKAE 456

Query: 233 CSRRTSSDSASM 198
            S         M
Sbjct: 457 LSESEEDKGGKM 468

>RADC_VIBVY (Q7MPS7) DNA repair protein radC homolog|
          Length = 224

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 351 PAQEPPRVDQRLPDGLQPLQVRLRDHHAVG 262
           P+Q   R+ +RL D L  + +R+ DH  VG
Sbjct: 182 PSQADRRITRRLSDALGLVDIRVLDHFVVG 211

>RADC_VIBVU (Q8DDY0) DNA repair protein radC homolog|
          Length = 224

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 351 PAQEPPRVDQRLPDGLQPLQVRLRDHHAVG 262
           P+Q   R+ +RL D L  + +R+ DH  VG
Sbjct: 182 PSQADRRITRRLSDALGLVDIRVLDHFVVG 211

>RADC_VIBCH (Q9KVC9) DNA repair protein radC homolog|
          Length = 224

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 351 PAQEPPRVDQRLPDGLQPLQVRLRDHHAVG 262
           P+Q   R+  RL D L  +++R+ DH  VG
Sbjct: 182 PSQADRRITDRLRDALGLVEIRVLDHFVVG 211

>CP306_DROME (Q9VWR5) Cytochrome P450 306a1 (EC 1.14.-.-) (CYPCCCVIA1) (Phantom|
           protein) (Dmphm)
          Length = 574

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 20/63 (31%), Positives = 25/63 (39%)
 Frame = +3

Query: 54  VRGYIHRNCIASRVALGLDPGASGGSGRAWLAVT*YGTNGCVEEQ*WCHARAVTAGPPAA 233
           VR +  R+ +  R  L L  G  GG G             C +E  W HAR  T     A
Sbjct: 102 VRDFFRRDVMTGRAPLYLTHGIMGGFGII-----------CAQEDIWRHARRETIDWLKA 150

Query: 234 LGV 242
           LG+
Sbjct: 151 LGM 153

>TISD_HUMAN (P47974) Butyrate response factor 2 (TIS11D protein) (EGF-response|
           factor 2) (ERF-2)
          Length = 492

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 3/55 (5%)
 Frame = -3

Query: 413 PRAHLTPA---HSPEQAPRPVPFHPLRNXRGSTSACRMACSPCRSACAITTPSDA 258
           P  H  P     SP     P    P      S S+C  + S C SA A +TPS A
Sbjct: 264 PSGHHQPPGGLESPLLLDSPTSRTPPPPSCSSASSCSSSASSCSSASAASTPSGA 318


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,059,557
Number of Sequences: 219361
Number of extensions: 764893
Number of successful extensions: 2489
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2482
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)