ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl46b07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT008960.1| Triticum aestivum clone wdk1c.pk012.i2:fis, full ... 52 0.001
2gb|AF129756.1|DJ201G24 Homo sapiens MSH55 gene, partial cds; and... 46 0.084
3ref|XM_532218.2| PREDICTED: Canis familiaris synaptosomal-associ... 46 0.084
4ref|XM_862657.1| PREDICTED: Canis familiaris synaptosomal-associ... 46 0.084
5emb|BX511262.7| Human DNA sequence from clone DASS-336N12 on chr... 46 0.084
6emb|BX248305.13| Human DNA sequence from clone DASS-82G15 on chr... 46 0.084
7emb|AL805934.3| Human DNA sequence from clone DAQB-195H10 on chr... 46 0.084
8emb|AL662801.7| Human DNA sequence from clone XXbac-296P20 on ch... 46 0.084
9emb|AL662847.6| Human DNA sequence from clone XXbac-270M2 on chr... 46 0.084
10emb|CR759761.9| Human DNA sequence from clone DAMC-157M7 on chro... 46 0.084
11emb|CR753892.5| Human DNA sequence from clone DADB-70P7 on chrom... 46 0.084
12dbj|AB017437.1| Gallus gallus mRNA for avena, complete cds 46 0.084
13gb|AC148688.1| Macaca mulatta Major Histocompatibility Complex B... 46 0.084
14dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partia... 46 0.084
15ref|NM_204300.1| Gallus gallus enabled homolog (Drosophila) (ENA... 46 0.084
16dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA... 46 0.084
17dbj|AB057641.1| Gallus gallus mRNA for avEna neural variant, com... 46 0.084
18dbj|AB035523.1| Gallus gallus mRNA for avenaIII, complete cds 46 0.084
19dbj|AB035522.1| Gallus gallus mRNA for avenaII, complete cds 46 0.084
20ref|XM_879747.1| PREDICTED: Bos taurus similar to splicing facto... 44 0.33
21ref|XM_879722.1| PREDICTED: Bos taurus similar to splicing facto... 44 0.33
22ref|XM_483106.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.3
23ref|XM_845999.1| PREDICTED: Canis familiaris similar to Alpha-fe... 42 1.3
24ref|XM_546849.2| PREDICTED: Canis familiaris similar to Alpha-fe... 42 1.3
25dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
26ref|NM_001008974.1| Pan troglodytes deformed epidermal autoregul... 42 1.3
27dbj|AP004762.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
28gb|AF049461.1|AF049461 Pan troglodytes nuclear DEAF-1 related tr... 42 1.3
29gb|BC073988.1| Homo sapiens formin-like 1, mRNA (cDNA clone IMAG... 40 5.2
30ref|NM_197688.1| Oryza sativa (japonica cultivar-group) putative... 40 5.2
31ref|NM_015409.3| Homo sapiens E1A binding protein p400 (EP400), ... 40 5.2
32ref|NM_005892.3| Homo sapiens formin-like 1 (FMNL1), mRNA 40 5.2
33gb|AC137592.2| Oryza sativa (Japonica cultiva-group) chromosome ... 40 5.2
34gb|BC021906.1| Homo sapiens formin-like 1, mRNA (cDNA clone IMAG... 40 5.2
35gb|BC064572.1| Homo sapiens formin-like 1, mRNA (cDNA clone IMAG... 40 5.2
36gb|AC084864.4| Homo sapiens chromosome 7 clone RP11-738B7, compl... 40 5.2
37gb|AY278319.1| Homo sapiens leukocyte formin mRNA, complete cds 40 5.2
38gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 gen... 40 5.2
39gb|AF432213.1| Homo sapiens CLL-associated antigen KW-13 mRNA, p... 40 5.2
40gb|AY044869.1| Homo sapiens p400 SWI2/SNF2-related protein mRNA,... 40 5.2
41gb|AC008105.32| Homo sapiens chromosome 17, clone CTD-2020K17, c... 40 5.2
42dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
43dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
44gb|AC137590.2| Homo sapiens 12 BAC RP13-820C6 (Roswell Park Canc... 40 5.2
45gb|AC019231.7| Homo sapiens BAC clone RP11-573O16 from 2, comple... 40 5.2
46gb|AC010209.14| Homo sapiens 12 BAC RP11-427C3 (Roswell Park Can... 40 5.2
47dbj|AK131091.1| Homo sapiens mRNA for FLJ00304 protein 40 5.2
48gb|AE000512.1| Thermotoga maritima MSB8, complete genome 40 5.2
49gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.2
50dbj|AB056762.1| Macaca fascicularis brain cDNA clone:QccE-21503,... 40 5.2 
>gb|BT008960.1| Triticum aestivum clone wdk1c.pk012.i2:fis, full insert mRNA
           sequence
          Length = 2815

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 360 aagaggggaaatcctatacagcttgt 385
           ||||||||||||||||||||||||||
Sbjct: 1   aagaggggaaatcctatacagcttgt 26
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>gb|AF129756.1|DJ201G24 Homo sapiens MSH55 gene, partial cds; and CLIC1, DDAH, G6b, G6c, G5b,
              G6d, G6e, G6f, BAT5, G5b, CSK2B, BAT4, G4, Apo M, BAT3,
              BAT2, AIF-1, 1C7, LST-1, LTB, TNF, and LTA genes, complete
              cds
          Length = 184666

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 201    ccgccaccgccaccacctctccc 223
              |||||||||||||||||||||||
Sbjct: 129149 ccgccaccgccaccacctctccc 129171
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>ref|XM_532218.2| PREDICTED: Canis familiaris synaptosomal-associated protein, 91kDa,
            transcript variant 1 (SNAP91), mRNA
          Length = 4165

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 201  ccgccaccgccaccacctctcccacca 227
            |||||||||||||||||||| ||||||
Sbjct: 1652 ccgccaccgccaccacctctgccacca 1678
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>ref|XM_862657.1| PREDICTED: Canis familiaris synaptosomal-associated protein, 91kDa,
            transcript variant 3 (SNAP91), mRNA
          Length = 4073

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 201  ccgccaccgccaccacctctcccacca 227
            |||||||||||||||||||| ||||||
Sbjct: 1644 ccgccaccgccaccacctctgccacca 1670
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>emb|BX511262.7| Human DNA sequence from clone DASS-336N12 on chromosome 6, complete
           sequence
          Length = 69009

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 201 ccgccaccgccaccacctctccc 223
           |||||||||||||||||||||||
Sbjct: 474 ccgccaccgccaccacctctccc 452
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>emb|BX248305.13| Human DNA sequence from clone DASS-82G15 on chromosome 6 Contains the
             UQCRHP1 pseudogene for ubiquinol-cytochrome c reductase
             hinge protein pseudogene 1, AIF1 gene for allograft
             inflammatory factor 1, the 5' end of the BAT2 gene for
             HLA-B associated transcript 2, and 1 CpG island, complete
             sequence
          Length = 16685

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 201   ccgccaccgccaccacctctccc 223
             |||||||||||||||||||||||
Sbjct: 15159 ccgccaccgccaccacctctccc 15137
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>emb|AL805934.3| Human DNA sequence from clone DAQB-195H10 on chromosome 6 Contains
            the AIF1 gene for allograft inflammatory factor 1, the
            BAT2 genes for HLA-B associated transcript 2, the BAT3
            gene for HLA-B associated transcript 3, the APOM gene for
            apolipoprotein M, the C6orf47 gene for chromosome 6 open
            reading frame 47, the BAT4 gene for HLA-B associated
            transcript 4, the CSNK2B gene for casein kinase 2, beta
            polypeptide, the LY6G5B gene for lymphocyte antigen 6
            complex, locus G5B, the bQB195H10.12 gene for a novel
            protein, the LY6G5C gene for lymphocyte antigen 6
            complex, locus G5C, the BAT5 gene for HLA-B associated
            transcript 5, the 5' end for LY6G6D gene for lymphocyte
            antigen 6 complex, locus G6D and 7 CpG islands, complete
            sequence
          Length = 99109

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 201  ccgccaccgccaccacctctccc 223
            |||||||||||||||||||||||
Sbjct: 9399 ccgccaccgccaccacctctccc 9377
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>emb|AL662801.7| Human DNA sequence from clone XXbac-296P20 on chromosome 6 contains a
             ribosomal protein L15 (RPL15) pseudogene, the BAT1 gene
             for HLA-B associated transcript 1, the ATP6V1G gene for
             ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G,
             the NFKBIL1 gene for nuclear factor of kappa light
             polypeptide gene enhancer in B-cells inhibitor-like 1, the
             LTA gene for lymphotoxin alpha, the TNF gene for tumour
             necrosis factor, the LTB gene for lymphotoxin beta, the
             LST1 gene for leukocyte specific transcript 1, the LY117
             gene for lymphocyte antigen 117, the AIF1 gene for
             alograft imflammatory factor 1, the BAT2 gene for HLA-B
             associated transcript 2, the BAT3 gene for HLA-B
             associated transcript 3, the APOM gene for apolipoprotein
             M, the 3' end of the gene for chromosome 6, open reading
             frame 47 and four CpG islands, complete sequence
          Length = 132330

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 201   ccgccaccgccaccacctctccc 223
             |||||||||||||||||||||||
Sbjct: 93594 ccgccaccgccaccacctctccc 93572
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>emb|AL662847.6| Human DNA sequence from clone XXbac-270M2 on chromosome 6 contains the
              gene for a novel protein similar to similar to
              peptidyl-prolyl cis-trans isomerase A (PPIase), a ribosomal
              protein L15 (RPL15) pseudogene, the BAT1 gene for HLA-B
              associated transcript 1, the ATP6V1G gene for ATPase, H+
              transporting, lysosomal 13kDa, V1 subunit G, the NFKBIL1
              gene for nuclear factor of kappa light polypeptide gene
              enhancer in B-cells inhibitor-like 1, the LTA gene for
              lymphotoxin alpha, the TNF gene for tumour necrosis factor,
              the LTB gene for lymphotoxin beta, the LST1 gene for
              leukocyte specific transcript 1, the LY117 gene for
              lymphocyte antigen 117, the AIF1 gene for  alograft
              imflammatory factor 1, the BAT2 gene for HLA-B associated
              transcript 2, the 3' end of the BAT3 gene for HLA-B
              associated transcript 3 and two CpG islands, complete
              sequence
          Length = 135784

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 201    ccgccaccgccaccacctctccc 223
              |||||||||||||||||||||||
Sbjct: 107361 ccgccaccgccaccacctctccc 107339
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>emb|CR759761.9| Human DNA sequence from clone DAMC-157M7 on chromosome 6, complete
            sequence
          Length = 83849

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 201  ccgccaccgccaccacctctccc 223
            |||||||||||||||||||||||
Sbjct: 9391 ccgccaccgccaccacctctccc 9369
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>emb|CR753892.5| Human DNA sequence from clone DADB-70P7 on chromosome 6, complete
             sequence
          Length = 101422

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 201   ccgccaccgccaccacctctccc 223
             |||||||||||||||||||||||
Sbjct: 77806 ccgccaccgccaccacctctccc 77784
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>dbj|AB017437.1| Gallus gallus mRNA for avena, complete cds
          Length = 2265

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 201  ccgccaccgccaccacctctccc 223
            |||||||||||||||||||||||
Sbjct: 1229 ccgccaccgccaccacctctccc 1251
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>gb|AC148688.1| Macaca mulatta Major Histocompatibility Complex BAC MMU218K02, complete
             sequence
          Length = 182826

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 201   ccgccaccgccaccacctctccc 223
             |||||||||||||||||||||||
Sbjct: 55970 ccgccaccgccaccacctctccc 55948
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>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds
          Length = 3284914

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 201   ccgccaccgccaccacctctccc 223
             |||||||||||||||||||||||
Sbjct: 22101 ccgccaccgccaccacctctccc 22123
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>ref|NM_204300.1| Gallus gallus enabled homolog (Drosophila) (ENAH), mRNA
          Length = 3297

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 201  ccgccaccgccaccacctctccc 223
            |||||||||||||||||||||||
Sbjct: 1705 ccgccaccgccaccacctctccc 1727
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>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region
          Length = 2229817

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 201    ccgccaccgccaccacctctccc 223
              |||||||||||||||||||||||
Sbjct: 323101 ccgccaccgccaccacctctccc 323123
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>dbj|AB057641.1| Gallus gallus mRNA for avEna neural variant, complete cds
          Length = 3297

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 201  ccgccaccgccaccacctctccc 223
            |||||||||||||||||||||||
Sbjct: 1705 ccgccaccgccaccacctctccc 1727
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>dbj|AB035523.1| Gallus gallus mRNA for avenaIII, complete cds
          Length = 1853

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 201 ccgccaccgccaccacctctccc 223
           |||||||||||||||||||||||
Sbjct: 763 ccgccaccgccaccacctctccc 785
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>dbj|AB035522.1| Gallus gallus mRNA for avenaII, complete cds
          Length = 2135

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 201  ccgccaccgccaccacctctccc 223
            |||||||||||||||||||||||
Sbjct: 1118 ccgccaccgccaccacctctccc 1140
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>ref|XM_879747.1| PREDICTED: Bos taurus similar to splicing factor,
            arginine/serine-rich 14, transcript variant 4
            (LOC516567), mRNA
          Length = 5478

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 62   aagaaaaagaaaagccaggggg 83
            ||||||||||||||||||||||
Sbjct: 3410 aagaaaaagaaaagccaggggg 3389
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>ref|XM_879722.1| PREDICTED: Bos taurus similar to splicing factor,
            arginine/serine-rich 14, transcript variant 3
            (LOC516567), mRNA
          Length = 5798

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 62   aagaaaaagaaaagccaggggg 83
            ||||||||||||||||||||||
Sbjct: 3730 aagaaaaagaaaagccaggggg 3709
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>ref|XM_483106.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1113

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 203 gccaccgccaccacctctcccacca 227
           ||||||||||||||||| |||||||
Sbjct: 892 gccaccgccaccacctcccccacca 916
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>ref|XM_845999.1| PREDICTED: Canis familiaris similar to Alpha-fetoprotein enhancer
            binding protein (AT motif-binding factor) (AT-binding
            transcription factor 1), transcript variant 2
            (LOC489729), mRNA
          Length = 11346

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 203  gccaccgccaccacctctcccacca 227
            ||||||||||||||||| |||||||
Sbjct: 6138 gccaccgccaccacctcccccacca 6162
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>ref|XM_546849.2| PREDICTED: Canis familiaris similar to Alpha-fetoprotein enhancer
            binding protein (AT motif-binding factor) (AT-binding
            transcription factor 1), transcript variant 1
            (LOC489729), mRNA
          Length = 11373

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 203  gccaccgccaccacctctcccacca 227
            ||||||||||||||||| |||||||
Sbjct: 6165 gccaccgccaccacctcccccacca 6189
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 203      gccaccgccaccacctctcccacca 227
                ||||||||||||||||| |||||||
Sbjct: 24314064 gccaccgccaccacctcccccacca 24314088
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>ref|NM_001008974.1| Pan troglodytes deformed epidermal autoregulatory factor 1 (DEAF1),
           mRNA
          Length = 2405

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 266 gccgcggccgccacccctgccgcct 290
           ||||||||||||||| |||||||||
Sbjct: 463 gccgcggccgccaccgctgccgcct 439
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>dbj|AP004762.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0686H11
          Length = 135273

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 203   gccaccgccaccacctctcccacca 227
             ||||||||||||||||| |||||||
Sbjct: 54368 gccaccgccaccacctcccccacca 54392
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>gb|AF049461.1|AF049461 Pan troglodytes nuclear DEAF-1 related transcriptional regulator
           protein mRNA, complete cds
          Length = 2405

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 266 gccgcggccgccacccctgccgcct 290
           ||||||||||||||| |||||||||
Sbjct: 463 gccgcggccgccaccgctgccgcct 439
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>gb|BC073988.1| Homo sapiens formin-like 1, mRNA (cDNA clone IMAGE:5729432),
           partial cds
          Length = 2590

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 200 cccgccaccgccaccacctc 219
           ||||||||||||||||||||
Sbjct: 512 cccgccaccgccaccacctc 531
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>ref|NM_197688.1| Oryza sativa (japonica cultivar-group) putative oxysterol-binding
           protein (OSJNBb0014I11.10), mRNA
          Length = 2229

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 200 cccgccaccgccaccacctc 219
           ||||||||||||||||||||
Sbjct: 155 cccgccaccgccaccacctc 136
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>ref|NM_015409.3| Homo sapiens E1A binding protein p400 (EP400), mRNA
          Length = 12265

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 265  tgccgcggccgccacccctg 284
            ||||||||||||||||||||
Sbjct: 5538 tgccgcggccgccacccctg 5557
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>ref|NM_005892.3| Homo sapiens formin-like 1 (FMNL1), mRNA
          Length = 3973

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 200  cccgccaccgccaccacctc 219
            ||||||||||||||||||||
Sbjct: 1964 cccgccaccgccaccacctc 1983
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>gb|AC137592.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone
             OSJNBa0035B22, complete sequence
          Length = 155788

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 204   ccaccgccaccacctctcccacca 227
             |||||||||||||||||| |||||
Sbjct: 42717 ccaccgccaccacctctctcacca 42740
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>gb|BC021906.1| Homo sapiens formin-like 1, mRNA (cDNA clone IMAGE:4343469),
           complete cds
          Length = 2383

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 200 cccgccaccgccaccacctc 219
           ||||||||||||||||||||
Sbjct: 475 cccgccaccgccaccacctc 494
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>gb|BC064572.1| Homo sapiens formin-like 1, mRNA (cDNA clone IMAGE:5732058),
           containing frame-shift errors
          Length = 2100

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 200 cccgccaccgccaccacctc 219
           ||||||||||||||||||||
Sbjct: 46  cccgccaccgccaccacctc 65
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>gb|AC084864.4| Homo sapiens chromosome 7 clone RP11-738B7, complete sequence
          Length = 176562

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 201   ccgccaccgccaccacctctccca 224
             ||||||||||||||||| ||||||
Sbjct: 62698 ccgccaccgccaccacccctccca 62721
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>gb|AY278319.1| Homo sapiens leukocyte formin mRNA, complete cds
          Length = 3973

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 200  cccgccaccgccaccacctc 219
            ||||||||||||||||||||
Sbjct: 1964 cccgccaccgccaccacctc 1983
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>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete
              sequence
          Length = 135510

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 200    cccgccaccgccaccacctc 219
              ||||||||||||||||||||
Sbjct: 103758 cccgccaccgccaccacctc 103777
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>gb|AF432213.1| Homo sapiens CLL-associated antigen KW-13 mRNA, partial cds
          Length = 3435

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 200  cccgccaccgccaccacctc 219
            ||||||||||||||||||||
Sbjct: 1438 cccgccaccgccaccacctc 1457
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>gb|AY044869.1| Homo sapiens p400 SWI2/SNF2-related protein mRNA, complete cds
          Length = 10017

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 265  tgccgcggccgccacccctg 284
            ||||||||||||||||||||
Sbjct: 5468 tgccgcggccgccacccctg 5487
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>gb|AC008105.32| Homo sapiens chromosome 17, clone CTD-2020K17, complete sequence
          Length = 96875

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   cccgccaccgccaccacctc 219
             ||||||||||||||||||||
Sbjct: 73811 cccgccaccgccaccacctc 73830
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 200      cccgccaccgccaccacctc 219
                ||||||||||||||||||||
Sbjct: 21230601 cccgccaccgccaccacctc 21230582
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 204      ccaccgccaccacctctcccacca 227
                |||||||||||||||||| |||||
Sbjct: 21837283 ccaccgccaccacctctctcacca 21837306
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>gb|AC137590.2| Homo sapiens 12 BAC RP13-820C6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 128729

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 265   tgccgcggccgccacccctg 284
             ||||||||||||||||||||
Sbjct: 63221 tgccgcggccgccacccctg 63202
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>gb|AC019231.7| Homo sapiens BAC clone RP11-573O16 from 2, complete sequence
          Length = 187268

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    cggccaagccttcttcctcc 108
             ||||||||||||||||||||
Sbjct: 40806 cggccaagccttcttcctcc 40825
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>gb|AC010209.14| Homo sapiens 12 BAC RP11-427C3 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 191148

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 299    tgaagaagcacagaagatatcaaa 322
              ||||||| ||||||||||||||||
Sbjct: 138162 tgaagaaacacagaagatatcaaa 138139
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>dbj|AK131091.1| Homo sapiens mRNA for FLJ00304 protein
          Length = 5087

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 200  cccgccaccgccaccacctc 219
            ||||||||||||||||||||
Sbjct: 2501 cccgccaccgccaccacctc 2520
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>gb|AE000512.1| Thermotoga maritima MSB8, complete genome
          Length = 1860725

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 353     ttttggcaagaggggaaatc 372
               ||||||||||||||||||||
Sbjct: 1685394 ttttggcaagaggggaaatc 1685413
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 200      cccgccaccgccaccacctc 219
                ||||||||||||||||||||
Sbjct: 21241865 cccgccaccgccaccacctc 21241846
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>dbj|AB056762.1| Macaca fascicularis brain cDNA clone:QccE-21503, full insert
           sequence
          Length = 3257

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 265 tgccgcggccgccacccctg 284
           ||||||||||||||||||||
Sbjct: 787 tgccgcggccgccacccctg 806


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,633,669
Number of Sequences: 3902068
Number of extensions: 3633669
Number of successful extensions: 105074
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104761
Number of HSP's gapped (non-prelim): 313
length of query: 388
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 366
effective length of database: 17,147,199,772
effective search space: 6275875116552
effective search space used: 6275875116552
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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