>PGLRX_COCCA (Q00359) Exopolygalacturonase precursor (EC 3.2.1.67) (ExoPG)|
           (Galacturan 1,4-alpha-galacturonidase)
           (Poly(1,4-alpha-D-galacturonide)galacturonohydrolase)
          Length = 446

 Score = 31.2 bits (69), Expect = 0.71
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = -1

Query: 219 PPTDLLCGN**ASPG-RLRVSLVELLSGGEDDPVNFFRSIEMCRGLAAASAPRAWRF 52
           PP   L G   + PG R +  +++ L GG+DD  N   +++ C        P+  +F
Sbjct: 36  PPVPFLPGKASSVPGSRNKTCMLKALGGGKDDSANILSAVKQCNNGGHVVFPKGQQF 92

>CJ047_HUMAN (Q86WR7) Protein C10orf47|
          Length = 435

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 1/82 (1%)
 Frame = +1

Query: 1   SPSCSRRRSREGVLEAAKSPGARCRGRGEAPAHFYRPKKVNWVIFPSRKQFNKAYPKSPR 180
           SP+   R  R G      + G R    G  P+H  +PK      FPS         + PR
Sbjct: 212 SPTSPFREGRPGEWRTPAARGPRSGDPGPGPSHPAQPKAPR---FPSNIIVTNGAAREPR 268

Query: 181 TGLSVPAEKV-GRRSSFIWTKH 243
             LS  A  V  RR+  + T H
Sbjct: 269 RTLSRAAVSVQERRAQVLATIH 290

>MOXR_PARDE (P29901) Protein moxR|
          Length = 339

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 17/42 (40%), Positives = 20/42 (47%)
 Frame = -1

Query: 216 PTDLLCGN**ASPGRLRVSLVELLSGGEDDPVNFFRSIEMCR 91
           PTDL+     A  GR R+    +L  GED  V FF  I   R
Sbjct: 79  PTDLIYSTHIAEDGRPRIEPGPVLEQGEDMAVFFFNEINRAR 120

>UNC87_CAEEL (P37806) Uncoordinated protein 87 (Protein unc-87)|
          Length = 576

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = +1

Query: 82  GEAPAHFYRPKKVNWVIFPSRKQFNKAYPKSPRTGLSVPAEKVGRRSSFIW 234
           GE P   Y   KV+  I PS+  +NK   +   T    P +  G+    IW
Sbjct: 514 GELP---YEAMKVSETIIPSQAGWNKGDSQKKMTSFGAPRDVKGKHLKRIW 561

>SKB1_MOUSE (Q8CIG8) Protein arginine N-methyltransferase 5 (EC 2.1.1.-) (Shk1|
           kinase-binding protein 1 homolog) (SKB1 homolog)
           (Jak-binding protein 1)
          Length = 636

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = +2

Query: 194 FPQRRSVGGHHLYGQNIC--FWSCSGE*KSW 280
           FP ++ +  H   GQNIC  FW CS   K W
Sbjct: 583 FPIKQPITVHE--GQNICVRFWRCSNSKKVW 611

>PRP5_NEUCR (Q7SH33) Pre-mRNA-processing ATP-dependent RNA helicase prp-5 (EC|
           3.6.1.-)
          Length = 1194

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +1

Query: 16  RRRSREGVLEAAKSPGARCRGRGEAPAHFYRPKK 117
           RRRSR+  L+  +SP  R R R   P   YRP++
Sbjct: 91  RRRSRDRGLDRLRSPDRR-RDRSRDPDREYRPRR 123

>SYM1_DEBHA (Q6BMY0) Protein SYM1|
          Length = 206

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 79  RGEAPAHFYRPKKVNWVIFPSRKQFNKA 162
           R +  AH++   K NWV++P+ + FN A
Sbjct: 132 REKLHAHWFNTLKTNWVVWPTFQLFNFA 159


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,448,078
Number of Sequences: 219361
Number of extensions: 843134
Number of successful extensions: 2145
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2145
length of database: 80,573,946
effective HSP length: 69
effective length of database: 65,438,037
effective search space used: 1570512888
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)