Clone Name | bastl46a10 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | ASPH_HUMAN (Q12797) Aspartyl/asparaginyl beta-hydroxylase (EC 1.... | 28 | 7.2 | 2 | ENGC_SYNEL (Q8DK79) Probable GTPase engC (EC 3.6.1.-) | 28 | 9.3 | 3 | GSPD2_DICD3 (Q01565) General secretion pathway protein D precurs... | 28 | 9.3 |
---|
>ASPH_HUMAN (Q12797) Aspartyl/asparaginyl beta-hydroxylase (EC 1.14.11.16)| (Aspartate beta-hydroxylase) (ASP beta-hydroxylase) (Peptide-aspartate beta-dioxygenase) Length = 757 Score = 28.1 bits (61), Expect = 7.2 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -1 Query: 106 RSDGARTQSGVGSGSCARGWSRPGVER 26 +S G + SG GSGS + G S PG R Sbjct: 8 KSSGNSSSSGSGSGSTSAGSSSPGARR 34
>ENGC_SYNEL (Q8DK79) Probable GTPase engC (EC 3.6.1.-)| Length = 348 Score = 27.7 bits (60), Expect = 9.3 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = +3 Query: 33 TPGLDQPRAQDPDPTPLCVRAPSLRQR 113 TPG +QP PDP L P +RQR Sbjct: 224 TPGFNQPELP-PDPRQLAAAFPEIRQR 249
>GSPD2_DICD3 (Q01565) General secretion pathway protein D precursor (Pectic| enzymes secretion protein outD) Length = 710 Score = 27.7 bits (60), Expect = 9.3 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%) Frame = +2 Query: 8 ASDRTVSLHSGSRPA-PCAGSRSNSTLCSGSVASAKG 115 + +R S + SRP+ P +GS SNS SGS S+ G Sbjct: 292 SGNRNSSSSNASRPSSPRSGSSSNSNSSSGSSGSSSG 328 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,974,658 Number of Sequences: 219361 Number of extensions: 282694 Number of successful extensions: 1413 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1353 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1412 length of database: 80,573,946 effective HSP length: 14 effective length of database: 77,502,892 effective search space used: 1860069408 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)