Clone Name | bastl46a10 |
---|---|
Clone Library Name | barley_pub |
>gb|AC092235.1|AC092235 Drosophila melanogaster, chromosome 2L, region 21E-21F, BAC clone BACR30G21, complete sequence Length = 168370 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 gcaggatccagatccaactc 78 |||||||||||||||||||| Sbjct: 113309 gcaggatccagatccaactc 113290
>gb|AE003588.3| Drosophila melanogaster chromosome 2L, section 3 of 83 of the complete sequence Length = 308447 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 gcaggatccagatccaactc 78 |||||||||||||||||||| Sbjct: 150432 gcaggatccagatccaactc 150413
>gb|AC004420.1|AC004420 Drosophila melanogaster DNA sequence (P1 DS02649 (D132)), complete sequence Length = 79987 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 gcaggatccagatccaactc 78 |||||||||||||||||||| Sbjct: 54042 gcaggatccagatccaactc 54061
>ref|XM_745620.1| Aspergillus fumigatus Af293 hypothetical protein (Afu6g08240) partial mRNA Length = 7749 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 aagtcgcatcggatcgaaccgtt 25 |||||||||||| |||||||||| Sbjct: 70 aagtcgcatcggttcgaaccgtt 92
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 56 tgcgcaggatccagatcca 74 ||||||||||||||||||| Sbjct: 4342710 tgcgcaggatccagatcca 4342728
>emb|BX294137.1| Pirellula sp. strain 1 complete genome; segment 5/24 Length = 302550 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 65 tccagatccaactccactc 83 ||||||||||||||||||| Sbjct: 25980 tccagatccaactccactc 25998
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 56 tgcgcaggatccagatcca 74 ||||||||||||||||||| Sbjct: 4349365 tgcgcaggatccagatcca 4349383
>gb|K01991.1|ECOMELB Escherichia coli alpha-galactosidase (melA) gene, partial cds; and melibiose carrier (melB) gene, complete cds Length = 1575 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 56 tgcgcaggatccagatcca 74 ||||||||||||||||||| Sbjct: 1367 tgcgcaggatccagatcca 1385
>gb|AY623658.2| Aeromicrobium erythreum putative transcriptional repressor and putative dehydrogenase/reductase genes, complete cds; erythromycin biosynthesis gene cluster, complete sequence; putative oxidoreductase and LipN genes, complete cds; monoamine oxidase gene, partial cds; and unknown gene Length = 61845 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 35 tccgggtctcgaccagccc 53 ||||||||||||||||||| Sbjct: 40395 tccgggtctcgaccagccc 40377
>gb|U14003.1|ECOUW93 Escherichia coli K-12 chromosomal region from 92.8 to 00.1 minutes Length = 338534 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 56 tgcgcaggatccagatcca 74 ||||||||||||||||||| Sbjct: 35515 tgcgcaggatccagatcca 35533
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 56 tgcgcaggatccagatcca 74 ||||||||||||||||||| Sbjct: 4374738 tgcgcaggatccagatcca 4374756 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 482,417 Number of Sequences: 3902068 Number of extensions: 482417 Number of successful extensions: 29740 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 29678 Number of HSP's gapped (non-prelim): 62 length of query: 118 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 97 effective length of database: 17,151,101,840 effective search space: 1663656878480 effective search space used: 1663656878480 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)