>ADA2B_DUGDU (O77713) Alpha-2B adrenergic receptor (Alpha-2B adrenoceptor)|
           (Alpha-2B adrenoreceptor) (Fragment)
          Length = 390

 Score = 37.0 bits (84), Expect = 0.012
 Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 4/95 (4%)
 Frame = -3

Query: 274 ILTVSVSTNRRDLWSEIAPRNQASKQKHLSDGNEPLLCSWPPTSCSTKCSAGRNGGAAPP 95
           I  ++  ++RR   ++  PR   SKQ H  D     L + P  + S   +   NG + PP
Sbjct: 182 IYLIAKRSHRRGPGAKGGPRKGESKQPHSLDSGPSALANLPTLASSLAVAGEANGHSMPP 241

Query: 94  REAKELSREHQGTSPGFLGLLMIP----GARGGKC 2
            E +  + E  GT        ++P    G +GG C
Sbjct: 242 GEKERETSEDPGTPTLPPSWPVLPNSGQGQKGGVC 276

>ADA2B_ELEMA (O19014) Alpha-2B adrenergic receptor (Alpha-2B adrenoceptor)|
           (Alpha-2B adrenoreceptor) (Fragment)
          Length = 384

 Score = 33.1 bits (74), Expect = 0.18
 Identities = 21/73 (28%), Positives = 32/73 (43%)
 Frame = -3

Query: 274 ILTVSVSTNRRDLWSEIAPRNQASKQKHLSDGNEPLLCSWPPTSCSTKCSAGRNGGAAPP 95
           I  ++  +NRR   ++ APR    KQ H        L + P  + S   +   NG + PP
Sbjct: 182 IYLIAKRSNRRGPRAKGAPREGEPKQPHPLPAGPSALANSPTLASSLAVTGEANGHSEPP 241

Query: 94  REAKELSREHQGT 56
            E +  + E  GT
Sbjct: 242 GEKERETPEDPGT 254

>CEZ1_HUMAN (Q6GQQ9) Zinc finger A20 domain-containing protein 1 (EC 3.-.-.-)|
           (Cellular zinc finger anti-NF-kappa B protein) (Zinc
           finger protein Cezanne)
          Length = 843

 Score = 31.2 bits (69), Expect = 0.68
 Identities = 24/76 (31%), Positives = 29/76 (38%), Gaps = 12/76 (15%)
 Frame = -3

Query: 199 QKHLSDGNEPLLCSWPPTSCSTKCSAGRNGGAAPPREAKEL-SREHQGTSP--------- 50
           Q++LSD  E  L          K   G  GG  PP +  E  +RE Q T P         
Sbjct: 629 QRYLSDAEERFLAEQKQKEAERKIMNGGIGGGPPPAKKPEPDAREEQPTGPPAESRAMAF 688

Query: 49  --GFLGLLMIPGARGG 8
             G+ G   IP   GG
Sbjct: 689 STGYPGDFTIPRPSGG 704

>PROP_MOUSE (P11680) Properdin precursor (Factor P)|
          Length = 464

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -2

Query: 125 SRTKWRRCSTEGSQRAQPRTPGNLAWFLGLVDD-PWCP 15
           S+ + RRC   G Q ++   PG L W L   +D P CP
Sbjct: 93  SQLRHRRCVGRGGQCSENVAPGTLEWQLQACEDQPCCP 130

>INO80_ASPFU (Q4WTV7) Putative DNA helicase ino80 (EC 3.6.1.-)|
          Length = 1708

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 18/54 (33%), Positives = 23/54 (42%)
 Frame = -3

Query: 223 APRNQASKQKHLSDGNEPLLCSWPPTSCSTKCSAGRNGGAAPPREAKELSREHQ 62
           AP+   S+  H S    PL  + PP           NGGA PP    E S ++Q
Sbjct: 49  APQPSLSRSPHYSHAPSPLPATLPPL----------NGGAPPPGHHPEPSSQYQ 92

>FZD2_RAT (Q08464) Frizzled 2 precursor (Frizzled-2) (Fz-2) (rFz2)|
          Length = 570

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 7/52 (13%)
 Frame = -3

Query: 220 PRNQASK----QKHLSDGNEPLLCSWPPTSCSTKCS---AGRNGGAAPPREA 86
           PR+ A +    Q H  DG   LL + PP+           G  GG APPR A
Sbjct: 147 PRHGAEQICVGQNHSEDGTPALLTTAPPSGLQPGAGGTPGGPGGGGAPPRYA 198

>APX1_CAEEL (P41990) Anterior pharynx in excess protein 1 precursor|
          Length = 515

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
 Frame = -3

Query: 292 LCTVFSILTVSVSTNRRDLWSEIAPRNQASKQKHLSD---GNEPLLCSWPPTSCSTKCSA 122
           +C +FS+  + ++     L S     +  SK KH S    G   +L    PT+ S   S 
Sbjct: 396 ICVLFSVCVIGLA-----LVSFFFYMHSFSKWKHPSSQQAGGSTIL----PTTTSIPMST 446

Query: 121 GRNGGAAPPREAKELSREHQGTSPG 47
             +G  +P  +   +  EH+G +PG
Sbjct: 447 TSSGTGSPVYKVCIIDSEHRGNAPG 471

>MIS_BOVIN (P03972) Muellerian-inhibiting factor precursor (MIS)|
           (Anti-Muellerian hormone) (AMH) (Mullerian-inhibiting
           substance)
          Length = 575

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -3

Query: 196 KHLSDGNEPLLCSWPPTSCSTKCSAGRNGGAAP 98
           + L DG EPLL   PPT+ +T   A   G  +P
Sbjct: 352 ERLLDGEEPLLLLLPPTAATTGVPATPQGPKSP 384

>STC_DROME (P40798) Protein shuttle craft|
          Length = 1106

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -3

Query: 163 CSWPPTSCSTKCSAGRNGGAAPPREAKEL 77
           C+ P  +C  KC+A  + GA P    KEL
Sbjct: 869 CTKPRPTCGHKCAAACHEGACPETPCKEL 897

>FZD2_HUMAN (Q14332) Frizzled 2 precursor (Frizzled-2) (Fz-2) (hFz2) (FzE2)|
          Length = 565

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 7/52 (13%)
 Frame = -3

Query: 220 PRNQASK----QKHLSDGNEPLLCSWPPTSCSTKCSA---GRNGGAAPPREA 86
           PR+ A +    Q H  DG   LL + PP            G  GG APPR A
Sbjct: 142 PRHGAEQICVGQNHSEDGAPALLTTAPPPGLQPGAGGTPGGPGGGGAPPRYA 193

>CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment)|
          Length = 1027

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -3

Query: 121 GRNGGAAPPREAKELSREHQGTSPGFLGLLMIPGARGGK 5
           G  G A P         + QG  PG  GL+ +PG RG K
Sbjct: 529 GATGPAGPTGSPGVAGAKGQGGPPGPAGLVGLPGERGPK 567

>TSSC4_RAT (Q5XIB1) Protein TSSC4|
          Length = 317

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = -3

Query: 163 CSWPPTSCSTKCSAGRNGGAAPPRE--AKELSREHQGTSP 50
           CS P TS    CS  R    APP +  A+ LSR H  T P
Sbjct: 106 CSAPQTSVVDNCSFKRP--VAPPSQTPARSLSRVHGNTDP 143

>PROP_CAVPO (Q64181) Properdin precursor (Factor P)|
          Length = 470

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -2

Query: 125 SRTKWRRCSTEGSQRAQPRTPGNLAWFLGLVDDPWC 18
           S+ + RRC   G Q ++ + PG L W L   ++  C
Sbjct: 96  SQLRHRRCIGWGGQCSENKAPGTLEWQLQACEEQQC 131

>SERR_DROME (P18168) Serrate protein precursor (Protein beaded)|
          Length = 1404

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 12/73 (16%)
 Frame = -3

Query: 184  DGNEPLLCS----WPPTSCS---TKCSAGR--NGGAAPPREAKELSREHQGTSPGFLGLL 32
            DG+    C     W    CS   T C AG+  NGG   P    +  + H   +PG+ GL 
Sbjct: 812  DGDGDFTCECMSGWTGKRCSERATGCYAGQCQNGGTCMPGAPDKALQPHCRCAPGWTGLF 871

Query: 31   ---MIPGARGGKC 2
                I   RG  C
Sbjct: 872  CAEAIDQCRGQPC 884

>SP4_HUMAN (Q02446) Transcription factor Sp4 (SPR-1)|
          Length = 784

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 23/102 (22%), Positives = 44/102 (43%)
 Frame = -3

Query: 316 LLDLKNQRLCTVFSILTVSVSTNRRDLWSEIAPRNQASKQKHLSDGNEPLLCSWPPTSCS 137
           L+ L+NQ       ++T  ++ N    W  +A    ASK+ ++S           P S S
Sbjct: 80  LVQLQNQP--QQLELVTTQLAGNA---WQLVASTPPASKENNVSQ----------PASSS 124

Query: 136 TKCSAGRNGGAAPPREAKELSREHQGTSPGFLGLLMIPGARG 11
           +  S+  NG A+P +     ++    ++PG   ++ +    G
Sbjct: 125 SSSSSSNNGSASPTK-----TKSGNSSTPGQFQVIQVQNPSG 161

>HAM_DROME (Q8I7Z8) Transcription factor hamlet|
          Length = 990

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -3

Query: 154 PPTSCSTKCSAGRNGGAAPPREAKELSREHQGTSPG 47
           PPTS   + S+   GGA P   A   + +H   + G
Sbjct: 711 PPTSAGGELSSTSEGGAVPTMAAAAFAADHSALASG 746

>CAC1B_RABIT (Q05152) Voltage-dependent N-type calcium channel alpha-1B subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.2)
            (Calcium channel, L type, alpha-1 polypeptide isoform 5)
            (Brain calcium channel III) (BIII)
          Length = 2339

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
 Frame = -1

Query: 243  GIYGPRSHRGTRRASRST*VMEMSRC-SARGRRPAVRRNAQQDEMAALLHRGKPKSSAEN 67
            G  GPR  RG  R SRS          S RGR P      +         RG P+ +AE 
Sbjct: 882  GELGPREERGRPRRSRSKEAPGAPEVRSDRGRGPCPEGGRRHH------RRGSPEEAAE- 934

Query: 66   TREPR 52
             REPR
Sbjct: 935  -REPR 938

>PGCA_CANFA (Q28343) Aggrecan core protein precursor (Cartilage-specific|
           proteoglycan core protein) (CSPCP)
          Length = 2333

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
 Frame = -3

Query: 226 IAPRNQASKQKHLSD-GNEPLLC---SWPPTSCSTKCSAGRNGGAAPPREAKELSREHQG 59
           I P NQ   +   S  G  PL     +WPPTS +T+ S     G   P  ++E S   + 
Sbjct: 743 IEPENQTEWEPAYSPAGTSPLPGIPPTWPPTSTATEESTEGPSGTEVPSVSEEPSPSEEP 802

Query: 58  TSPGFLGLLMIPGARG 11
                L  L  PG  G
Sbjct: 803 FPWEELSTLSPPGPSG 818

>C78A1_MAIZE (P48420) Cytochrome P450 78A1 (EC 1.14.-.-) (CYPLXXVIII)|
          Length = 547

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -3

Query: 181 GNEPLLCSWPPTSCSTKCSAGRNGGAAPPREAKE 80
           G    L SW P  C    ++ R  GAA PR  ++
Sbjct: 66  GASASLLSWDPVVCPCSAASSRCPGAAAPRPRRD 99

>YB08_YEAST (P38285) Protein YBR158W|
          Length = 549

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
 Frame = -1

Query: 186 VMEMSRCSARGRRPAVRRNAQQDEMAALLHRGKPK-----SSAENTREPRLV 46
           ++ +   +    RP +RRN Q  E + L+++ + +     S+A+  R+P LV
Sbjct: 180 IVSLESANIPKERPCLRRNPQSYEHSLLMYKDEERAKKAWSAAQQLRDPPLV 231

>PLEC1_HUMAN (Q15149) Plectin-1 (PLTN) (PCN) (Hemidesmosomal protein 1) (HD1)|
          Length = 4684

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -1

Query: 186  VMEMSRCSARGRRPAVRRNAQQDEMAALLHR 94
            V EMSR  AR    A R   Q +E+   LHR
Sbjct: 2526 VAEMSRAQARAEEDAQRFRKQAEEIGEKLHR 2556

>BARD1_RAT (Q9QZH2) BRCA1-associated RING domain protein 1 (BARD-1)|
          Length = 768

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
 Frame = -3

Query: 232 SEIAPRNQASKQKHL---SDGNEPLLCSWPPTSCSTKCSAGRNGGAAPPRE 89
           SE AP  +   +      SDGN P  C  PPTS S KC +     +   RE
Sbjct: 290 SEEAPEKKVCVEDRCPVGSDGN-PKGCHRPPTSTSKKCGSNVPSASGEIRE 339

>LDCA_ECOL6 (P59238) Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13)|
           (LD-carboxypeptidase A)
          Length = 304

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 104 CSTEGSQRAQPRTPGNLAWFLGLVDDPWCPRRE 6
           C TEG+        GNLA  + L+  PW P+ E
Sbjct: 166 CQTEGTLWG-----GNLAMLISLIGTPWMPKIE 193

>CRUM2_MOUSE (Q80YA8) Crumbs homolog 2 (Crumbs-like protein 2) (Fragment)|
          Length = 1248

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 10/67 (14%)
 Frame = -3

Query: 172 PLLCSWPPTSCSTKCSAGRNGG-AAPPREAKELSRE---------HQGTSPGFLGLLMIP 23
           P +C+  P +  TKC A  +GG    P E    + +          QG  P       +P
Sbjct: 9   PSVCASDPCAPGTKCQATESGGYTCEPSELGGCATQPCHHGALCVPQGPDPNSFRCYCVP 68

Query: 22  GARGGKC 2
           G +G  C
Sbjct: 69  GFQGPHC 75

>CCNL1_XENLA (Q6GN15) Cyclin-L1|
          Length = 496

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 20/73 (27%), Positives = 27/73 (36%), Gaps = 12/73 (16%)
 Frame = -1

Query: 237 YGPRSHRGTRRASRST*VMEMSRCSARGRRPAVRRNAQ------------QDEMAALLHR 94
           + PR H   RR SRS      SR  +R    + RR+              +D      H+
Sbjct: 379 HSPRRHYNNRRRSRSGTYSSRSRSRSRSHSESPRRHHNHGSPHMKLKHRVEDLRGRHAHK 438

Query: 93  GKPKSSAENTREP 55
            K   S   +REP
Sbjct: 439 RKKSHSPSKSREP 451

>COAT_BWYVG (P09509) Coat protein|
          Length = 202

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 18/50 (36%), Positives = 21/50 (42%)
 Frame = -1

Query: 228 RSHRGTRRASRST*VMEMSRCSARGRRPAVRRNAQQDEMAALLHRGKPKS 79
           R  R TRRA RS  V+ +    A  RRP  RR         +  RG   S
Sbjct: 15  RPRRQTRRAQRSQPVVVVQTSRATQRRPRRRRRGNNRTRGTVPTRGAGSS 64


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,288,110
Number of Sequences: 219361
Number of extensions: 918064
Number of successful extensions: 2959
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2955
length of database: 80,573,946
effective HSP length: 82
effective length of database: 62,586,344
effective search space used: 1502072256
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)