ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl45h09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NG_002690.1| Homo sapiens Prader-Willi/Angelman syndrome reg... 44 0.27
2gb|BC002582.2| Homo sapiens ubiquitin protein ligase E3A (human ... 44 0.27
3gb|AC124997.4| Homo sapiens chromosome 15, clone RP11-466L14, co... 44 0.27
4ref|NM_130839.1| Homo sapiens ubiquitin protein ligase E3A (huma... 44 0.27
5dbj|AK056239.1| Homo sapiens cDNA FLJ31677 fis, clone NT2RI20051... 44 0.27
6gb|DQ341315.2| Ascochyta lentis strain ATCC 96419 MAT1-2-1 (MAT1... 44 0.27
7gb|AC124311.7| Homo sapiens chromosome 15, clone RP11-479F18, co... 44 0.27
8gb|AF009339.1|HSUBE6AP1 Homo sapiens E6-AP ubiquitin-protein lig... 44 0.27
9gb|AC004600.2|AC004600 Homo sapiens Chromosome 15q11-q13 PAC clo... 44 0.27
10gb|AC004259.1|AC004259 Human Chromosome 15q11-q13 PAC clone pDJ1... 44 0.27
11ref|NM_185464.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.1
12gb|AC137618.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.1
13gb|AC111275.4| Rattus norvegicus 4 BAC CH230-49L22 (Children's H... 42 1.1
14gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.1
15gb|AC112030.4| Rattus norvegicus 4 BAC CH230-100K8 (Children's H... 42 1.1
16gb|AC093620.3| Homo sapiens BAC clone RP13-901C16 from 7, comple... 42 1.1
17emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete ... 42 1.1
18emb|BX640427.1| Bordetella parapertussis strain 12822, complete ... 42 1.1
19gb|AC092562.4| Papio hamadryas BAC RP41-285I13 (Rosewell Park Ca... 42 1.1
20ref|XM_938007.1| PREDICTED: Homo sapiens microtubule associated ... 42 1.1
21ref|XM_038150.5| PREDICTED: Homo sapiens microtubule associated ... 42 1.1
22gb|AC020904.7| Homo sapiens chromosome 19 clone CTB-52I2, comple... 42 1.1
23dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
24dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
25ref|NM_021266.2| Rattus norvegicus frizzled homolog 1 (Drosophil... 42 1.1
26dbj|AP001168.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
27dbj|AK108334.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
28gb|AC005793.1|AC005793 Homo sapiens chromosome 19, cosmid F23522... 42 1.1
29gb|L02529.1|RATFRZZH Rattus norvegicus Drosophila polarity gene ... 42 1.1
30dbj|AB011133.1| Homo sapiens mRNA for KIAA0561 protein, partial cds 42 1.1
31gb|AC153856.23| Mus musculus 10 BAC RP23-468J15 (Roswell Park Ca... 40 4.2
32gb|BC052680.1| Mus musculus transformed mouse 3T3 cell double mi... 40 4.2
33ref|NM_148922.2| Mus musculus transformed mouse 3T3 cell double ... 40 4.2
34ref|XM_851492.1| PREDICTED: Canis familiaris hypothetical protei... 40 4.2
35emb|AL670729.19| Human DNA sequence from clone RP11-245P10 on ch... 40 4.2
36emb|X54529.1|BMVVP Belladonna mottle virus VP gene for virion pr... 40 4.2
37emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4,... 40 4.2
38emb|AL606608.3|OSJN00056 Oryza sativa genomic DNA, chromosome 4,... 40 4.2
39gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence 40 4.2
40dbj|AK004789.2| Mus musculus adult male lung cDNA, RIKEN full-le... 40 4.2
41dbj|AK011769.1| Mus musculus 10 days embryo whole body cDNA, RIK... 40 4.2
42dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
43dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
44dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 4.2
45gb|DQ341314.1| Ascochyta lentis strain ATCC 96420 MAT1-1-1 (MAT1... 40 4.2
46gb|AC158804.3| Mus musculus 10 BAC RP24-354M22 (Roswell Park Can... 40 4.2
47dbj|AP005443.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
48dbj|AK111359.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.2
49gb|AF035634.1| Dulcamara mottle tymovirus virion protein gene, c... 40 4.2
50emb|AL928560.6| Mouse DNA sequence from clone RP23-353N23 on chr... 40 4.2
51gb|M20823.1|MUSMDM1A Mouse nuclear protein (mdm-1) mRNA, complet... 40 4.2 
>ref|NG_002690.1| Homo sapiens Prader-Willi/Angelman syndrome region (PWSAS@) on chromosome
              15
          Length = 755217

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 227    gccgaaggaggcgccgccgccc 248
              ||||||||||||||||||||||
Sbjct: 657862 gccgaaggaggcgccgccgccc 657883
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>gb|BC002582.2| Homo sapiens ubiquitin protein ligase E3A (human papilloma virus
           E6-associated protein, Angelman syndrome), transcript
           variant 3, mRNA (cDNA clone MGC:2086 IMAGE:3160225),
           complete cds
          Length = 3331

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 227 gccgaaggaggcgccgccgccc 248
           ||||||||||||||||||||||
Sbjct: 211 gccgaaggaggcgccgccgccc 190
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>gb|AC124997.4| Homo sapiens chromosome 15, clone RP11-466L14, complete sequence
          Length = 179810

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 227   gccgaaggaggcgccgccgccc 248
             ||||||||||||||||||||||
Sbjct: 82455 gccgaaggaggcgccgccgccc 82476
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>ref|NM_130839.1| Homo sapiens ubiquitin protein ligase E3A (human papilloma virus
           E6-associated protein, Angelman syndrome) (UBE3A),
           transcript variant 3, mRNA
          Length = 5164

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 227 gccgaaggaggcgccgccgccc 248
           ||||||||||||||||||||||
Sbjct: 211 gccgaaggaggcgccgccgccc 190
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>dbj|AK056239.1| Homo sapiens cDNA FLJ31677 fis, clone NT2RI2005116, highly similar
           to UBIQUITIN-PROTEIN LIGASE E3A (EC 6.3.2.-)
          Length = 1909

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 227 gccgaaggaggcgccgccgccc 248
           ||||||||||||||||||||||
Sbjct: 226 gccgaaggaggcgccgccgccc 205
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>gb|DQ341315.2| Ascochyta lentis strain ATCC 96419 MAT1-2-1 (MAT1-2-1) gene, complete
            cds
          Length = 3638

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 106  aaaccctaccgccagtgctccagttc 131
            |||||||||||||||||||| |||||
Sbjct: 3133 aaaccctaccgccagtgctcgagttc 3108
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>gb|AC124311.7| Homo sapiens chromosome 15, clone RP11-479F18, complete sequence
          Length = 142745

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 227  gccgaaggaggcgccgccgccc 248
            ||||||||||||||||||||||
Sbjct: 8134 gccgaaggaggcgccgccgccc 8155
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>gb|AF009339.1|HSUBE6AP1 Homo sapiens E6-AP ubiquitin-protein ligase (UBE3A) exon 1 sequence
          Length = 539

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 227 gccgaaggaggcgccgccgccc 248
           ||||||||||||||||||||||
Sbjct: 257 gccgaaggaggcgccgccgccc 236
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>gb|AC004600.2|AC004600 Homo sapiens Chromosome 15q11-q13 PAC clone pDJ373b1 containing Angelman
              Syndrome gene (UBE3A), complete sequence
          Length = 133863

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 227    gccgaaggaggcgccgccgccc 248
              ||||||||||||||||||||||
Sbjct: 111398 gccgaaggaggcgccgccgccc 111419
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>gb|AC004259.1|AC004259 Human Chromosome 15q11-q13 PAC clone pDJ14i12 containing Angelman
             Syndrome gene (UBE3A), complete sequence
          Length = 118684

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 227   gccgaaggaggcgccgccgccc 248
             ||||||||||||||||||||||
Sbjct: 90541 gccgaaggaggcgccgccgccc 90562
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>ref|NM_185464.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1533

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 222 gcggcgccgaaggaggcgccg 242
           |||||||||||||||||||||
Sbjct: 148 gcggcgccgaaggaggcgccg 128
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>gb|AC137618.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0090H02,
              complete sequence
          Length = 135231

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 72     cgcgtccaaaccctagctagc 92
              |||||||||||||||||||||
Sbjct: 116379 cgcgtccaaaccctagctagc 116359
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>gb|AC111275.4| Rattus norvegicus 4 BAC CH230-49L22 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 227595

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 238    cgccgccgccccagccacagc 258
              |||||||||||||||||||||
Sbjct: 207217 cgccgccgccccagccacagc 207237
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>gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1393_A07,
             complete sequence
          Length = 159932

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 72    cgcgtccaaaccctagctagc 92
             |||||||||||||||||||||
Sbjct: 18834 cgcgtccaaaccctagctagc 18814
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>gb|AC112030.4| Rattus norvegicus 4 BAC CH230-100K8 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 237374

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 238   cgccgccgccccagccacagc 258
             |||||||||||||||||||||
Sbjct: 17476 cgccgccgccccagccacagc 17496
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>gb|AC093620.3| Homo sapiens BAC clone RP13-901C16 from 7, complete sequence
          Length = 71183

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 233   ggaggcgccgccgccccagcc 253
             |||||||||||||||||||||
Sbjct: 42810 ggaggcgccgccgccccagcc 42830
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>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16
          Length = 348706

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 221   cgcggcgccgaaggaggcgcc 241
             |||||||||||||||||||||
Sbjct: 42186 cgcggcgccgaaggaggcgcc 42206
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>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14
          Length = 348997

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 221    cgcggcgccgaaggaggcgcc 241
              |||||||||||||||||||||
Sbjct: 298873 cgcggcgccgaaggaggcgcc 298893
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>gb|AC092562.4| Papio hamadryas BAC RP41-285I13 (Rosewell Park Cancer Institute BAC
              Library) complete sequence
          Length = 183586

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 228    ccgaaggaggcgccgccgccc 248
              |||||||||||||||||||||
Sbjct: 130835 ccgaaggaggcgccgccgccc 130815
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>ref|XM_938007.1| PREDICTED: Homo sapiens microtubule associated serine/threonine
           kinase 3 (MAST3), mRNA
          Length = 5887

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 214 tggagcccgcggcgccgaaggaggc 238
           ||||||||||||||||| |||||||
Sbjct: 38  tggagcccgcggcgccgcaggaggc 14
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>ref|XM_038150.5| PREDICTED: Homo sapiens microtubule associated serine/threonine
           kinase 3 (MAST3), mRNA
          Length = 5890

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 214 tggagcccgcggcgccgaaggaggc 238
           ||||||||||||||||| |||||||
Sbjct: 38  tggagcccgcggcgccgcaggaggc 14
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>gb|AC020904.7| Homo sapiens chromosome 19 clone CTB-52I2, complete sequence
          Length = 148824

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 214    tggagcccgcggcgccgaaggaggc 238
              ||||||||||||||||| |||||||
Sbjct: 143699 tggagcccgcggcgccgcaggaggc 143675
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 222     gcggcgccgaaggaggcgccg 242
               |||||||||||||||||||||
Sbjct: 1376764 gcggcgccgaaggaggcgccg 1376744
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 72       cgcgtccaaaccctagctagc 92
                |||||||||||||||||||||
Sbjct: 17489029 cgcgtccaaaccctagctagc 17489009
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>ref|NM_021266.2| Rattus norvegicus frizzled homolog 1 (Drosophila) (Fzd1), mRNA
          Length = 4187

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 238 cgccgccgccccagccacagc 258
           |||||||||||||||||||||
Sbjct: 666 cgccgccgccccagccacagc 686
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>dbj|AP001168.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
             clone:P0425F02
          Length = 176979

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 222   gcggcgccgaaggaggcgccg 242
             |||||||||||||||||||||
Sbjct: 85303 gcggcgccgaaggaggcgccg 85283
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>dbj|AK108334.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-A04,
          full insert sequence
          Length = 933

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 72 cgcgtccaaaccctagctagc 92
          |||||||||||||||||||||
Sbjct: 39 cgcgtccaaaccctagctagc 59
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>gb|AC005793.1|AC005793 Homo sapiens chromosome 19, cosmid F23522, complete sequence
          Length = 38968

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 214  tggagcccgcggcgccgaaggaggc 238
            ||||||||||||||||| |||||||
Sbjct: 1051 tggagcccgcggcgccgcaggaggc 1027
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>gb|L02529.1|RATFRZZH Rattus norvegicus Drosophila polarity gene (frizzled) homologue mRNA,
            complete cds
          Length = 4540

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 238  cgccgccgccccagccacagc 258
            |||||||||||||||||||||
Sbjct: 1019 cgccgccgccccagccacagc 1039
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>dbj|AB011133.1| Homo sapiens mRNA for KIAA0561 protein, partial cds
          Length = 5887

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 214 tggagcccgcggcgccgaaggaggc 238
           ||||||||||||||||| |||||||
Sbjct: 36  tggagcccgcggcgccgcaggaggc 12
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>gb|AC153856.23| Mus musculus 10 BAC RP23-468J15 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 188027

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 256   agcccggggcggaggaggacggga 279
             ||||| ||||||||||||||||||
Sbjct: 75147 agcccagggcggaggaggacggga 75170
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>gb|BC052680.1| Mus musculus transformed mouse 3T3 cell double minute 1, mRNA (cDNA
            clone IMAGE:30063481), partial cds
          Length = 3090

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 256  agcccggggcggaggaggacggga 279
            ||||| ||||||||||||||||||
Sbjct: 1481 agcccagggcggaggaggacggga 1504
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>ref|NM_148922.2| Mus musculus transformed mouse 3T3 cell double minute 1 (Mdm1),
            transcript variant 2, mRNA
          Length = 3074

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 256  agcccggggcggaggaggacggga 279
            ||||| ||||||||||||||||||
Sbjct: 1486 agcccagggcggaggaggacggga 1509
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>ref|XM_851492.1| PREDICTED: Canis familiaris hypothetical protein LOC607008
           (LOC607008), mRNA
          Length = 1441

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 225 gcgccgaaggaggcgccgccgccc 248
           ||||||| ||||||||||||||||
Sbjct: 506 gcgccgagggaggcgccgccgccc 483
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>emb|AL670729.19| Human DNA sequence from clone RP11-245P10 on chromosome 1 Contains the
             3' end of the OBSCN gene for obscurin cytoskeletal
             calmodulin and titin-interacting RhoGEF protein, a novel
             protein, the TRIM11 gene for tripartite motif-containing
             11 protein, the 5' end of a novel transcript, the 3' end
             of the TRIM17 gene for tripartite motif-containing 17
             protein and three CpG islands, complete sequence
          Length = 62164

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 92    ccctccccaactccaaaccctacc 115
             ||||||||||||||| ||||||||
Sbjct: 26937 ccctccccaactccataccctacc 26960
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>emb|X54529.1|BMVVP Belladonna mottle virus VP gene for virion protein and ORF
          Length = 615

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 201 aagatctggcggatggagcc 220
           ||||||||||||||||||||
Sbjct: 155 aagatctggcggatggagcc 136
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>emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011F23,
              complete sequence
          Length = 149353

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 237    gcgccgccgccccagccaca 256
              ||||||||||||||||||||
Sbjct: 141384 gcgccgccgccccagccaca 141365
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>emb|AL606608.3|OSJN00056 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0015K02,
             complete sequence
          Length = 153623

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   gcgccgccgccccagccaca 256
             ||||||||||||||||||||
Sbjct: 60767 gcgccgccgccccagccaca 60748
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>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence
          Length = 181577

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 237    gcgccgccgccccagccaca 256
              ||||||||||||||||||||
Sbjct: 141502 gcgccgccgccccagccaca 141483
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>dbj|AK004789.2| Mus musculus adult male lung cDNA, RIKEN full-length enriched
            library, clone:1200015H18 product:transformed mouse 3T3
            cell double minute 1, full insert sequence
          Length = 3074

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 256  agcccggggcggaggaggacggga 279
            ||||| ||||||||||||||||||
Sbjct: 1486 agcccagggcggaggaggacggga 1509
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>dbj|AK011769.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:2610044J23 product:transformed
            mouse 3T3 cell double minute 1, full insert sequence
          Length = 2936

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 256  agcccggggcggaggaggacggga 279
            ||||| ||||||||||||||||||
Sbjct: 1486 agcccagggcggaggaggacggga 1509
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 237      gcgccgccgccccagccaca 256
                ||||||||||||||||||||
Sbjct: 33710324 gcgccgccgccccagccaca 33710305
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 111      ctaccgccagtgctccagtt 130
                ||||||||||||||||||||
Sbjct: 17772492 ctaccgccagtgctccagtt 17772473
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 229     cgaaggaggcgccgccgccc 248
               ||||||||||||||||||||
Sbjct: 7123003 cgaaggaggcgccgccgccc 7123022
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>gb|DQ341314.1| Ascochyta lentis strain ATCC 96420 MAT1-1-1 (MAT1-1-1) gene, complete
            cds
          Length = 3214

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 106  aaaccctaccgccagtgctc 125
            ||||||||||||||||||||
Sbjct: 2729 aaaccctaccgccagtgctc 2710
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>gb|AC158804.3| Mus musculus 10 BAC RP24-354M22 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 151309

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 256    agcccggggcggaggaggacggga 279
              ||||| ||||||||||||||||||
Sbjct: 133227 agcccagggcggaggaggacggga 133250
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>dbj|AP005443.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBb0011E04
          Length = 136767

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   ctaccgccagtgctccagtt 130
             ||||||||||||||||||||
Sbjct: 46886 ctaccgccagtgctccagtt 46867
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>dbj|AK111359.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-H04, full
           insert sequence
          Length = 598

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 237 gcgccgccgccccagccaca 256
           ||||||||||||||||||||
Sbjct: 203 gcgccgccgccccagccaca 184
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>gb|AF035634.1| Dulcamara mottle tymovirus virion protein gene, complete cds
          Length = 682

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 201 aagatctggcggatggagcc 220
           ||||||||||||||||||||
Sbjct: 161 aagatctggcggatggagcc 142
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>emb|AL928560.6| Mouse DNA sequence from clone RP23-353N23 on chromosome 2, complete
             sequence
          Length = 209502

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 91    gccctccccaactccaaaccctac 114
             |||||||||| |||||||||||||
Sbjct: 34257 gccctccccacctccaaaccctac 34234
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>gb|M20823.1|MUSMDM1A Mouse nuclear protein (mdm-1) mRNA, complete cds
          Length = 2934

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 256  agcccggggcggaggaggacggga 279
            ||||| ||||||||||||||||||
Sbjct: 1394 agcccagggcggaggaggacggga 1417


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,565,687
Number of Sequences: 3902068
Number of extensions: 1565687
Number of successful extensions: 33924
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 33631
Number of HSP's gapped (non-prelim): 293
length of query: 317
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 295
effective length of database: 17,147,199,772
effective search space: 5058423932740
effective search space used: 5058423932740
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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