ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bastl45h05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_450999.1| Oryza sativa (japonica cultivar-group), mRNA Length = 783 Score = 244 bits (123), Expect = 2e-61 Identities = 262/308 (85%), Gaps = 9/308 (2%) Strand = Plus / Plus Query: 97 gcgctgtcccagtcggagctcgtggcgctcgcggccgcgtcgccctacgccgtcgacccc 156 ||||||||||||||||| ||||||||||| ||||| | |||||||||| ||| ||||||| Sbjct: 37 gcgctgtcccagtcggatctcgtggcgctggcggcggggtcgccctactccgccgacccc 96 Query: 157 cgccgcgggcgccgcgacgccgacctcctcccgccccctaagatcgatcgggccgtcttc 216 |||||||| ||||||||||||| |||||||||| || ||||||||||| ||||||||| Sbjct: 97 cgccgcgg---ccgcgacgccgacgtcctcccgccaccgaagatcgatcgcgccgtcttc 153 Query: 217 aacgagagtgccggctcccgcaagcagaccttctcccgccgccgcgccgccaccaatctc 276 || ||||| ||||||||||| ||||||||||||||||||| ||||| ||||||||| ||| Sbjct: 154 aatgagagcgccggctcccgtaagcagaccttctcccgccaccgcgtcgccaccaacctc 213 Query: 277 tcccacaatctcacccctagcaccgcctcctcctccgccatcgccgc------ccccacc 330 ||||||| || ||||| |||||| ||| || ||||| | |||| |||| || Sbjct: 214 tcccacagcctgaccccggccaccgcttccgccgccgccgcccccgcccccgcccccgcc 273 Query: 331 gaggaggattccgagaaccgcctcatcgtgttccacctccagcagctctttgcgcgcgac 390 || ||||| ||||||||||||||||||| |||||||||||||| ||||| ||| |||| Sbjct: 274 gacgaggactccgagaaccgcctcatcgcgttccacctccagcgcctcttcgcgggcgag 333 Query: 391 gacccctc 398 |||||||| Sbjct: 334 gacccctc 341
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 244 bits (123), Expect = 2e-61 Identities = 262/308 (85%), Gaps = 9/308 (2%) Strand = Plus / Minus Query: 97 gcgctgtcccagtcggagctcgtggcgctcgcggccgcgtcgccctacgccgtcgacccc 156 ||||||||||||||||| ||||||||||| ||||| | |||||||||| ||| ||||||| Sbjct: 18036072 gcgctgtcccagtcggatctcgtggcgctggcggcggggtcgccctactccgccgacccc 18036013 Query: 157 cgccgcgggcgccgcgacgccgacctcctcccgccccctaagatcgatcgggccgtcttc 216 |||||||| ||||||||||||| |||||||||| || ||||||||||| ||||||||| Sbjct: 18036012 cgccgcgg---ccgcgacgccgacgtcctcccgccaccgaagatcgatcgcgccgtcttc 18035956 Query: 217 aacgagagtgccggctcccgcaagcagaccttctcccgccgccgcgccgccaccaatctc 276 || ||||| ||||||||||| ||||||||||||||||||| ||||| ||||||||| ||| Sbjct: 18035955 aatgagagcgccggctcccgtaagcagaccttctcccgccaccgcgtcgccaccaacctc 18035896 Query: 277 tcccacaatctcacccctagcaccgcctcctcctccgccatcgccgc------ccccacc 330 ||||||| || ||||| |||||| ||| || ||||| | |||| |||| || Sbjct: 18035895 tcccacagcctgaccccggccaccgcttccgccgccgccgcccccgcccccgcccccgcc 18035836 Query: 331 gaggaggattccgagaaccgcctcatcgtgttccacctccagcagctctttgcgcgcgac 390 || ||||| ||||||||||||||||||| |||||||||||||| ||||| ||| |||| Sbjct: 18035835 gacgaggactccgagaaccgcctcatcgcgttccacctccagcgcctcttcgcgggcgag 18035776 Query: 391 gacccctc 398 |||||||| Sbjct: 18035775 gacccctc 18035768 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 caccgcctcctcctccgcca 316 |||||||||||||||||||| Sbjct: 21624513 caccgcctcctcctccgcca 21624494
>dbj|AP006169.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0026C08 Length = 155316 Score = 244 bits (123), Expect = 2e-61 Identities = 262/308 (85%), Gaps = 9/308 (2%) Strand = Plus / Minus Query: 97 gcgctgtcccagtcggagctcgtggcgctcgcggccgcgtcgccctacgccgtcgacccc 156 ||||||||||||||||| ||||||||||| ||||| | |||||||||| ||| ||||||| Sbjct: 29194 gcgctgtcccagtcggatctcgtggcgctggcggcggggtcgccctactccgccgacccc 29135 Query: 157 cgccgcgggcgccgcgacgccgacctcctcccgccccctaagatcgatcgggccgtcttc 216 |||||||| ||||||||||||| |||||||||| || ||||||||||| ||||||||| Sbjct: 29134 cgccgcgg---ccgcgacgccgacgtcctcccgccaccgaagatcgatcgcgccgtcttc 29078 Query: 217 aacgagagtgccggctcccgcaagcagaccttctcccgccgccgcgccgccaccaatctc 276 || ||||| ||||||||||| ||||||||||||||||||| ||||| ||||||||| ||| Sbjct: 29077 aatgagagcgccggctcccgtaagcagaccttctcccgccaccgcgtcgccaccaacctc 29018 Query: 277 tcccacaatctcacccctagcaccgcctcctcctccgccatcgccgc------ccccacc 330 ||||||| || ||||| |||||| ||| || ||||| | |||| |||| || Sbjct: 29017 tcccacagcctgaccccggccaccgcttccgccgccgccgcccccgcccccgcccccgcc 28958 Query: 331 gaggaggattccgagaaccgcctcatcgtgttccacctccagcagctctttgcgcgcgac 390 || ||||| ||||||||||||||||||| |||||||||||||| ||||| ||| |||| Sbjct: 28957 gacgaggactccgagaaccgcctcatcgcgttccacctccagcgcctcttcgcgggcgag 28898 Query: 391 gacccctc 398 |||||||| Sbjct: 28897 gacccctc 28890
>dbj|AP005573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1509_C06 Length = 113436 Score = 244 bits (123), Expect = 2e-61 Identities = 262/308 (85%), Gaps = 9/308 (2%) Strand = Plus / Minus Query: 97 gcgctgtcccagtcggagctcgtggcgctcgcggccgcgtcgccctacgccgtcgacccc 156 ||||||||||||||||| ||||||||||| ||||| | |||||||||| ||| ||||||| Sbjct: 87726 gcgctgtcccagtcggatctcgtggcgctggcggcggggtcgccctactccgccgacccc 87667 Query: 157 cgccgcgggcgccgcgacgccgacctcctcccgccccctaagatcgatcgggccgtcttc 216 |||||||| ||||||||||||| |||||||||| || ||||||||||| ||||||||| Sbjct: 87666 cgccgcgg---ccgcgacgccgacgtcctcccgccaccgaagatcgatcgcgccgtcttc 87610 Query: 217 aacgagagtgccggctcccgcaagcagaccttctcccgccgccgcgccgccaccaatctc 276 || ||||| ||||||||||| ||||||||||||||||||| ||||| ||||||||| ||| Sbjct: 87609 aatgagagcgccggctcccgtaagcagaccttctcccgccaccgcgtcgccaccaacctc 87550 Query: 277 tcccacaatctcacccctagcaccgcctcctcctccgccatcgccgc------ccccacc 330 ||||||| || ||||| |||||| ||| || ||||| | |||| |||| || Sbjct: 87549 tcccacagcctgaccccggccaccgcttccgccgccgccgcccccgcccccgcccccgcc 87490 Query: 331 gaggaggattccgagaaccgcctcatcgtgttccacctccagcagctctttgcgcgcgac 390 || ||||| ||||||||||||||||||| |||||||||||||| ||||| ||| |||| Sbjct: 87489 gacgaggactccgagaaccgcctcatcgcgttccacctccagcgcctcttcgcgggcgag 87430 Query: 391 gacccctc 398 |||||||| Sbjct: 87429 gacccctc 87422
>ref|XM_483044.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3161 Score = 97.6 bits (49), Expect = 3e-17 Identities = 76/85 (89%) Strand = Plus / Plus Query: 171 cgacgccgacctcctcccgccccctaagatcgatcgggccgtcttcaacgagagtgccgg 230 ||||||||||| |||||||| | |||||||| || ||||||||||||||||| ||||| Sbjct: 241 cgacgccgaccaactcccgccgctgaagatcgaccgcgccgtcttcaacgagagcgccgg 300 Query: 231 ctcccgcaagcagaccttctcccgc 255 ||| ||||||||||||||||||||| Sbjct: 301 ctcgcgcaagcagaccttctcccgc 325
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 97.6 bits (49), Expect = 3e-17 Identities = 76/85 (89%) Strand = Plus / Plus Query: 171 cgacgccgacctcctcccgccccctaagatcgatcgggccgtcttcaacgagagtgccgg 230 ||||||||||| |||||||| | |||||||| || ||||||||||||||||| ||||| Sbjct: 24008090 cgacgccgaccaactcccgccgctgaagatcgaccgcgccgtcttcaacgagagcgccgg 24008149 Query: 231 ctcccgcaagcagaccttctcccgc 255 ||| ||||||||||||||||||||| Sbjct: 24008150 ctcgcgcaagcagaccttctcccgc 24008174 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 208 gccgtcttcaacgagagtgccggctcccgcaagcagaccttctcccgc 255 ||||||||||||||||| |||||||| || |||||||||||||||||| Sbjct: 23995899 gccgtcttcaacgagagcgccggctcgcgtaagcagaccttctcccgc 23995946 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 300 cgcctcctcctccgccatcgccgcc 324 ||||||||||||||||| ||||||| Sbjct: 1608225 cgcctcctcctccgccaccgccgcc 1608249
>dbj|AP004376.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0481F05 Length = 139739 Score = 97.6 bits (49), Expect = 3e-17 Identities = 76/85 (89%) Strand = Plus / Plus Query: 171 cgacgccgacctcctcccgccccctaagatcgatcgggccgtcttcaacgagagtgccgg 230 ||||||||||| |||||||| | |||||||| || ||||||||||||||||| ||||| Sbjct: 35490 cgacgccgaccaactcccgccgctgaagatcgaccgcgccgtcttcaacgagagcgccgg 35549 Query: 231 ctcccgcaagcagaccttctcccgc 255 ||| ||||||||||||||||||||| Sbjct: 35550 ctcgcgcaagcagaccttctcccgc 35574 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 208 gccgtcttcaacgagagtgccggctcccgcaagcagaccttctcccgc 255 ||||||||||||||||| |||||||| || |||||||||||||||||| Sbjct: 23299 gccgtcttcaacgagagcgccggctcgcgtaagcagaccttctcccgc 23346
>dbj|AP005918.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0419H09 Length = 143533 Score = 97.6 bits (49), Expect = 3e-17 Identities = 76/85 (89%) Strand = Plus / Plus Query: 171 cgacgccgacctcctcccgccccctaagatcgatcgggccgtcttcaacgagagtgccgg 230 ||||||||||| |||||||| | |||||||| || ||||||||||||||||| ||||| Sbjct: 141241 cgacgccgaccaactcccgccgctgaagatcgaccgcgccgtcttcaacgagagcgccgg 141300 Query: 231 ctcccgcaagcagaccttctcccgc 255 ||| ||||||||||||||||||||| Sbjct: 141301 ctcgcgcaagcagaccttctcccgc 141325 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 208 gccgtcttcaacgagagtgccggctcccgcaagcagaccttctcccgc 255 ||||||||||||||||| |||||||| || |||||||||||||||||| Sbjct: 129050 gccgtcttcaacgagagcgccggctcgcgtaagcagaccttctcccgc 129097
>dbj|AK069097.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004M17, full insert sequence Length = 3192 Score = 97.6 bits (49), Expect = 3e-17 Identities = 76/85 (89%) Strand = Plus / Plus Query: 171 cgacgccgacctcctcccgccccctaagatcgatcgggccgtcttcaacgagagtgccgg 230 ||||||||||| |||||||| | |||||||| || ||||||||||||||||| ||||| Sbjct: 272 cgacgccgaccaactcccgccgctgaagatcgaccgcgccgtcttcaacgagagcgccgg 331 Query: 231 ctcccgcaagcagaccttctcccgc 255 ||| ||||||||||||||||||||| Sbjct: 332 ctcgcgcaagcagaccttctcccgc 356
>ref|XM_483040.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2678 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 208 gccgtcttcaacgagagtgccggctcccgcaagcagaccttctcccgc 255 ||||||||||||||||| |||||||| || |||||||||||||||||| Sbjct: 270 gccgtcttcaacgagagcgccggctcgcgtaagcagaccttctcccgc 317
>ref|XM_507273.1| PREDICTED Oryza sativa (japonica cultivar-group), P0419H09.37-1 mRNA Length = 3973 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 208 gccgtcttcaacgagagtgccggctcccgcaagcagaccttctcccgc 255 ||||||||||||||||| |||||||| || |||||||||||||||||| Sbjct: 270 gccgtcttcaacgagagcgccggctcgcgtaagcagaccttctcccgc 317
>dbj|AK068243.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149G12, full insert sequence Length = 3974 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 208 gccgtcttcaacgagagtgccggctcccgcaagcagaccttctcccgc 255 ||||||||||||||||| |||||||| || |||||||||||||||||| Sbjct: 271 gccgtcttcaacgagagcgccggctcgcgtaagcagaccttctcccgc 318
>dbj|AK064883.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000K02, full insert sequence Length = 2677 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 208 gccgtcttcaacgagagtgccggctcccgcaagcagaccttctcccgc 255 ||||||||||||||||| |||||||| || |||||||||||||||||| Sbjct: 269 gccgtcttcaacgagagcgccggctcgcgtaagcagaccttctcccgc 316
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 314 ccatcgccgcccccaccgaggagga 338 ||||||||||||||||||||||||| Sbjct: 4379418 ccatcgccgcccccaccgaggagga 4379442
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 297 caccgcctcctcctccgccatcgccgcc 324 |||| ||||||||||||||||||||||| Sbjct: 25839447 cacctcctcctcctccgccatcgccgcc 25839474 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 251 cccgccgccgcgccgccacca 271 ||||||||||||||||||||| Sbjct: 889775 cccgccgccgcgccgccacca 889755
>dbj|AK071464.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023097O13, full insert sequence Length = 1486 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 297 caccgcctcctcctccgccatcgccgcc 324 |||| ||||||||||||||||||||||| Sbjct: 871 cacctcctcctcctccgccatcgccgcc 898
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 297 caccgcctcctcctccgccatcgccgcc 324 |||| ||||||||||||||||||||||| Sbjct: 25767623 cacctcctcctcctccgccatcgccgcc 25767650 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 251 cccgccgccgcgccgccacca 271 ||||||||||||||||||||| Sbjct: 889775 cccgccgccgcgccgccacca 889755
>emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa0018C20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137492 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 297 caccgcctcctcctccgccatcgccgcc 324 |||| ||||||||||||||||||||||| Sbjct: 60898 cacctcctcctcctccgccatcgccgcc 60925
>gb|DQ397560.1| Cenarchaeum symbiosum clone C01A04, complete sequence Length = 40230 Score = 46.1 bits (23), Expect = 0.091 Identities = 32/35 (91%) Strand = Plus / Plus Query: 297 caccgcctcctcctccgccatcgccgcccccaccg 331 ||||||| |||||||||||| ||||||| |||||| Sbjct: 5482 caccgccccctcctccgccaccgccgccgccaccg 5516
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 302 cctcctcctccgccatcgccgcc 324 ||||||||||||||||||||||| Sbjct: 29846937 cctcctcctccgccatcgccgcc 29846959 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 299 ccgcctcctcctccgccatcgccgcc 324 |||||||||||||||||| ||||||| Sbjct: 29598485 ccgcctcctcctccgccaccgccgcc 29598510 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 cctcctccgccatcgccgcc 324 |||||||||||||||||||| Sbjct: 29607165 cctcctccgccatcgccgcc 29607146 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 311 ccgccatcgccgcccccaccgaggagga 338 |||||||||||||| ||||||| ||||| Sbjct: 4350215 ccgccatcgccgccgccaccgacgagga 4350188
>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481E08 Length = 171965 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 302 cctcctcctccgccatcgccgcc 324 ||||||||||||||||||||||| Sbjct: 42450 cctcctcctccgccatcgccgcc 42472
>dbj|AK066293.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063D09, full insert sequence Length = 845 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 302 cctcctcctccgccatcgccgcc 324 ||||||||||||||||||||||| Sbjct: 91 cctcctcctccgccatcgccgcc 113
>gb|AC120984.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0026G02, complete sequence Length = 123472 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 302 cctcctcctccgccatcgccgccccc 327 |||||||| ||||||||||||||||| Sbjct: 118271 cctcctccgccgccatcgccgccccc 118246
>gb|AC120887.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0088K21, complete sequence Length = 153239 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 302 cctcctcctccgccatcgccgccccc 327 |||||||| ||||||||||||||||| Sbjct: 17188 cctcctccgccgccatcgccgccccc 17163
>gb|AC010020.7| Drosophila melanogaster 3L BAC RP98-26I3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 166857 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Minus Query: 297 caccgcctcctcctccgccatcgccgcccccacc 330 ||||||||||||| |||||| ||||||| ||||| Sbjct: 45958 caccgcctcctccaccgccaccgccgccaccacc 45925
>gb|AC010709.4| Drosophila melanogaster 3L BAC RPCI98-18D24 (Roswell Park Cancer Institute Drosophila BAC library) complete sequence Length = 166520 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 297 caccgcctcctcctccgccatcgccgcccccacc 330 ||||||||||||| |||||| ||||||| ||||| Sbjct: 19082 caccgcctcctccaccgccaccgccgccaccacc 19115
>ref|NM_168294.1| Drosophila melanogaster CG32030-RB, transcript variant B (CG32030), mRNA Length = 4346 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 297 caccgcctcctcctccgccatcgccgcccccacc 330 ||||||||||||| |||||| ||||||| ||||| Sbjct: 2294 caccgcctcctccaccgccaccgccgccaccacc 2327
>ref|NM_168293.1| Drosophila melanogaster CG32030-RA, transcript variant A (CG32030), mRNA Length = 5031 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 297 caccgcctcctcctccgccatcgccgcccccacc 330 ||||||||||||| |||||| ||||||| ||||| Sbjct: 2294 caccgcctcctccaccgccaccgccgccaccacc 2327
>gb|AY084212.1| Drosophila melanogaster SD08909 full insert cDNA Length = 4709 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 297 caccgcctcctcctccgccatcgccgcccccacc 330 ||||||||||||| |||||| ||||||| ||||| Sbjct: 1961 caccgcctcctccaccgccaccgccgccaccacc 1994
>gb|AY075386.1| Drosophila melanogaster LD24110 full length cDNA Length = 4325 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 297 caccgcctcctcctccgccatcgccgcccccacc 330 ||||||||||||| |||||| ||||||| ||||| Sbjct: 2262 caccgcctcctccaccgccaccgccgccaccacc 2295
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 302 cctcctcctccgccatcgccgccccc 327 |||||||| ||||||||||||||||| Sbjct: 22757471 cctcctccgccgccatcgccgccccc 22757446
>dbj|AP004329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1663_H12 Length = 125422 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 299 ccgcctcctcctccgccatcgccgcc 324 |||||||||||||||||| ||||||| Sbjct: 42070 ccgcctcctcctccgccaccgccgcc 42095 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 cctcctccgccatcgccgcc 324 |||||||||||||||||||| Sbjct: 50750 cctcctccgccatcgccgcc 50731
>dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0655A07 Length = 172473 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 299 ccgcctcctcctccgccatcgccgcc 324 |||||||||||||||||| ||||||| Sbjct: 162991 ccgcctcctcctccgccaccgccgcc 163016 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 cctcctccgccatcgccgcc 324 |||||||||||||||||||| Sbjct: 171671 cctcctccgccatcgccgcc 171652
>dbj|AK105838.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F04, full insert sequence Length = 1548 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 299 ccgcctcctcctccgccatcgccgcc 324 |||||||||||||||||| ||||||| Sbjct: 447 ccgcctcctcctccgccaccgccgcc 472
>gb|AE003554.3| Drosophila melanogaster chromosome 3L, section 31 of 83 of the complete sequence Length = 285158 Score = 44.1 bits (22), Expect = 0.36 Identities = 31/34 (91%) Strand = Plus / Plus Query: 297 caccgcctcctcctccgccatcgccgcccccacc 330 ||||||||||||| |||||| ||||||| ||||| Sbjct: 170093 caccgcctcctccaccgccaccgccgccaccacc 170126
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 302 cctcctcctccgccatcgccgccccc 327 |||||||| ||||||||||||||||| Sbjct: 23067381 cctcctccgccgccatcgccgccccc 23067356
>gb|BC084304.1| Xenopus laevis cDNA clone IMAGE:6863324, partial cds Length = 1626 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 297 caccgcctcctcctccgccat 317 ||||||||||||||||||||| Sbjct: 763 caccgcctcctcctccgccat 743
>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08, complete sequence Length = 142196 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 300 cgcctcctcctccgccatcgccgcc 324 ||||||||||||||||| ||||||| Sbjct: 128522 cgcctcctcctccgccagcgccgcc 128498
>gb|BC042237.1| Xenopus laevis hypothetical protein LOC398481, mRNA (cDNA clone IMAGE:5570892), partial cds Length = 1802 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 297 caccgcctcctcctccgccat 317 ||||||||||||||||||||| Sbjct: 775 caccgcctcctcctccgccat 755
>emb|AJ410870.2|SSC410870 Sus scrofa COX7A1 gene, CAPNS1 gene, CKAP1 gene, POLR2I gene and CLIPR-59 gene (partial) Length = 147663 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 299 ccgcctcctcctccgccatcgccgcccccaccg 331 ||||| |||||||||||| ||||||| |||||| Sbjct: 36840 ccgccgcctcctccgccaccgccgccgccaccg 36872
>gb|AC123675.7| Mus musculus chromosome 15, clone RP23-271I6, complete sequence Length = 233422 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 270 caatctctcccacaatctcac 290 ||||||||||||||||||||| Sbjct: 38673 caatctctcccacaatctcac 38693
>gb|AC130727.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560F03, complete sequence Length = 45160 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 300 cgcctcctcctccgccatcgccgcc 324 ||||||||||||||||| ||||||| Sbjct: 43407 cgcctcctcctccgccagcgccgcc 43431
>gb|DQ397597.1| Cenarchaeum symbiosum clone C05G09, complete sequence Length = 38349 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 299 ccgcctcctcctccgccatcgccgcccccaccg 331 ||||||||||||||||| ||||||| |||||| Sbjct: 34733 ccgcctcctcctccgcccccgccgccgccaccg 34701
>gb|BC097580.1| Xenopus laevis cDNA clone IMAGE:4031733 Length = 1901 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 297 caccgcctcctcctccgccat 317 ||||||||||||||||||||| Sbjct: 874 caccgcctcctcctccgccat 854
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 300 cgcctcctcctccgccatcgccgcc 324 ||||||||||||||||| ||||||| Sbjct: 29349865 cgcctcctcctccgccagcgccgcc 29349841 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 gcaccgcctcctcctccgcc 315 |||||||||||||||||||| Sbjct: 24153123 gcaccgcctcctcctccgcc 24153104
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 299 ccgcctcctcctccgccatcgccgcccccaccg 331 |||||||||||||||||| |||| || |||||| Sbjct: 40324410 ccgcctcctcctccgccaccgccaccgccaccg 40324378 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 cccgccgccgcgccgccacc 270 |||||||||||||||||||| Sbjct: 11428889 cccgccgccgcgccgccacc 11428870 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 300 cgcctcctcctccgccatcgccgc 323 |||| ||||||||||||||||||| Sbjct: 10776243 cgccgcctcctccgccatcgccgc 10776220 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 302 cctcctcctccgccatcgccgcccccaccgag 333 |||||||||||||| ||||||| |||||||| Sbjct: 8403759 cctcctcctccgccgccgccgccgccaccgag 8403728 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gtcgacccccgccgcgggcg 167 |||||||||||||||||||| Sbjct: 7669211 gtcgacccccgccgcgggcg 7669230 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 ctcccgccgccgcgccgcca 268 |||||||||||||||||||| Sbjct: 4274895 ctcccgccgccgcgccgcca 4274914 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 cccgccgccgcgccgccacc 270 |||||||||||||||||||| Sbjct: 3835131 cccgccgccgcgccgccacc 3835150
>gb|AC154122.7| Mus musculus chromosome 15, clone RP24-62G16, complete sequence Length = 215079 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 caatctctcccacaatctcac 290 ||||||||||||||||||||| Sbjct: 18160 caatctctcccacaatctcac 18140
>dbj|AP006167.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1455F06 Length = 140848 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 299 ccgcctcctcctccgccatcgccgcccccaccg 331 |||||||||||||||||| |||| || |||||| Sbjct: 33374 ccgcctcctcctccgccaccgccaccgccaccg 33342
>ref|NM_214318.1| Sus scrofa calpain I light subunit (CAPNS1), mRNA Length = 1929 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 299 ccgcctcctcctccgccatcgccgcccccaccg 331 ||||| |||||||||||| ||||||| |||||| Sbjct: 239 ccgccgcctcctccgccaccgccgccgccaccg 207
>gb|AF263457.1|AF263457 Zea mays SCARECROW (SCR) gene, complete cds Length = 3100 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 249 ctcccgccgccgcgccgccac 269 ||||||||||||||||||||| Sbjct: 184 ctcccgccgccgcgccgccac 204
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 246 cttctcccgccgccgcgccgccacc 270 ||||||||||| ||||||||||||| Sbjct: 429816 cttctcccgcccccgcgccgccacc 429840
>dbj|AP003886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1163_G08 Length = 150676 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 300 cgcctcctcctccgccatcgccgcc 324 ||||||||||||||||| ||||||| Sbjct: 135713 cgcctcctcctccgccaccgccgcc 135737
>dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0582D05 Length = 150483 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 300 cgcctcctcctccgccatcgccgcc 324 ||||||||||||||||| ||||||| Sbjct: 7725 cgcctcctcctccgccaccgccgcc 7749
>dbj|AK103383.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033127G06, full insert sequence Length = 1855 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 300 cgcctcctcctccgccatcgccgcc 324 ||||||||||||||||| ||||||| Sbjct: 239 cgcctcctcctccgccaccgccgcc 215
>dbj|AK066991.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090M19, full insert sequence Length = 2511 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 251 cccgccgccgcgccgccacca 271 ||||||||||||||||||||| Sbjct: 44 cccgccgccgcgccgccacca 64
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 ggcgctcgcggccgcgtcgcc 140 ||||||||||||||||||||| Sbjct: 993725 ggcgctcgcggccgcgtcgcc 993705
>emb|BX000505.1|CNS08CDV Oryza sativa chromosome 12, . BAC OJ1126_F08 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 134217 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 251 cccgccgccgcgccgccacca 271 ||||||||||||||||||||| Sbjct: 27360 cccgccgccgcgccgccacca 27340
>gb|AF010496.1|AF010496 Rhodobacter capsulatus strain SB1003, partial genome Length = 189370 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 cccgccgcgggcgccgcgacg 175 ||||||||||||||||||||| Sbjct: 157665 cccgccgcgggcgccgcgacg 157645
>gb|M11779.1|PIGCALPB Pig calpain I light subunit mRNA, complete cds Length = 1375 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 299 ccgcctcctcctccgccatcgccgcccccaccg 331 ||||| |||||||||||| ||||||| |||||| Sbjct: 239 ccgccgcctcctccgccaccgccgccgccaccg 207
>gb|M11778.1|PIGCALPA Pig calpain I light subunit mRNA, complete cds Length = 1929 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 299 ccgcctcctcctccgccatcgccgcccccaccg 331 ||||| |||||||||||| ||||||| |||||| Sbjct: 239 ccgccgcctcctccgccaccgccgccgccaccg 207
>ref|NM_113355.1| Arabidopsis thaliana protein binding AT3G24480 mRNA, complete cds Length = 1485 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 298 accgcctcctcctccgccatcgcc 321 |||||| ||||||||||||||||| Sbjct: 1230 accgccgcctcctccgccatcgcc 1253
>ref|XM_550399.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1788 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 ctcccgccgccgcgccgcca 268 |||||||||||||||||||| Sbjct: 405 ctcccgccgccgcgccgcca 386
>ref|XM_550300.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1389 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 cccgccgccgcgccgccacc 270 |||||||||||||||||||| Sbjct: 679 cccgccgccgcgccgccacc 660
>ref|NM_187882.1| Oryza sativa (japonica cultivar-group), Ozsa8324 predicted mRNA Length = 1320 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 302 cctcctcctccgccatcgccgcccccaccgag 333 |||||||||||||| ||||||| |||||||| Sbjct: 176 cctcctcctccgccgccgccgccgccaccgag 145
>ref|NM_188693.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 426 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gtcgacccccgccgcgggcg 167 |||||||||||||||||||| Sbjct: 3 gtcgacccccgccgcgggcg 22
>ref|NM_191592.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1677 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 cccgccgccgcgccgccacc 270 |||||||||||||||||||| Sbjct: 969 cccgccgccgcgccgccacc 950
>ref|XM_471683.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3195 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 301 gcctcctcctccgccatcgccgcc 324 |||||||||||||||| ||||||| Sbjct: 477 gcctcctcctccgccaccgccgcc 500
>ref|XM_470609.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 423 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tcctcctccgccatcgccgc 323 |||||||||||||||||||| Sbjct: 233 tcctcctccgccatcgccgc 214
>ref|XM_464101.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3420 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 301 gcctcctcctccgccatcgccgcc 324 |||||||||||||||| ||||||| Sbjct: 52 gcctcctcctccgccaccgccgcc 75
>ref|NM_196578.1| Oryza sativa (japonica cultivar-group) putative speckle-type protein (OSJNBa0072A12.18), mRNA Length = 939 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 301 gcctcctcctccgccatcgccgcc 324 ||||||||||||||||||| |||| Sbjct: 43 gcctcctcctccgccatcgtcgcc 66
>ref|XM_470725.1| Oryza sativa (japonica cultivar-group), mRNA Length = 654 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 299 ccgcctcctcctccgccatcgccgcccccacc 330 ||||||||||||||||| ||||||| ||||| Sbjct: 95 ccgcctcctcctccgccgccgccgccgccacc 64
>ref|NM_189312.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1068 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 cccgccgccgcgccgccacc 270 |||||||||||||||||||| Sbjct: 48 cccgccgccgcgccgccacc 67
>gb|AY022761.1| Oryza sativa microsatellite MRG5086 containing (CCT)X9, closest to marker R618, genomic sequence Length = 227 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 302 cctcctcctccgccatcgccgcccccaccgag 333 |||||||||||||| ||||||| |||||||| Sbjct: 119 cctcctcctccgccgccgccgccgccaccgag 150
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 147 cgtcgacccccgccgcgggcgccg 170 ||||||| |||||||||||||||| Sbjct: 3121098 cgtcgacgcccgccgcgggcgccg 3121121
>gb|AC112160.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1579_G03, complete sequence Length = 121466 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 gcaccgcctcctcctccgcc 315 |||||||||||||||||||| Sbjct: 39361 gcaccgcctcctcctccgcc 39342
>gb|AE017197.1| Rickettsia typhi str. Wilmington complete genome Length = 1111496 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 caccgcctcctcctccgcca 316 |||||||||||||||||||| Sbjct: 355253 caccgcctcctcctccgcca 355272
>gb|AC005711.2| Drosophila melanogaster clone BACR48M09, complete sequence Length = 165267 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 caccgcctcctcctccgcca 316 |||||||||||||||||||| Sbjct: 132169 caccgcctcctcctccgcca 132188
>gb|AC009214.8| Drosophila melanogaster clone BACR05E09, complete sequence Length = 154772 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 caccgcctcctcctccgcca 316 |||||||||||||||||||| Sbjct: 151352 caccgcctcctcctccgcca 151333
>ref|XM_365996.1| Magnaporthe grisea 70-15 hypothetical protein (MG10216.4) partial mRNA Length = 1551 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 304 tcctcctccgccatcgccgccccc 327 |||||| ||||||||||||||||| Sbjct: 1226 tcctccaccgccatcgccgccccc 1203
>ref|XM_368161.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG01083.4) partial mRNA Length = 1911 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccgcgccgccacca 271 |||||||||||||||||||| Sbjct: 175 ccgccgccgcgccgccacca 194
>gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0031H05, complete sequence Length = 141200 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 caccgcctcctcctccgcca 316 |||||||||||||||||||| Sbjct: 81139 caccgcctcctcctccgcca 81120
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 147 cgtcgacccccgccgcgggcgccg 170 ||||||| |||||||||||||||| Sbjct: 1317936 cgtcgacgcccgccgcgggcgccg 1317959
>gb|AC123683.6| Mus musculus chromosome 9, clone RP23-296I6, complete sequence Length = 189100 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 153 cccccgccgcgggcgccgcgacgc 176 |||||||||||||| ||||||||| Sbjct: 124540 cccccgccgcgggccccgcgacgc 124563
>gb|AC102492.8| Mus musculus chromosome 18, clone RP24-546B7, complete sequence Length = 149705 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 aaaccgaaaccccaaattgccctc 24 ||||| |||||||||||||||||| Sbjct: 79721 aaaccaaaaccccaaattgccctc 79744
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 303 ctcctcctccgccatcgccgcccccacc 330 |||||||||| ||||||||||| ||||| Sbjct: 34229409 ctcctcctcctccatcgccgccgccacc 34229382 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 299 ccgcctcctcctccgccatcgccgcccccacc 330 ||||||||||||||||| ||||||| ||||| Sbjct: 14774953 ccgcctcctcctccgccgccgccgccgccacc 14774922 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tcctcctccgccatcgccgc 323 |||||||||||||||||||| Sbjct: 6878540 tcctcctccgccatcgccgc 6878521 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 299 ccgcctcctcctccgccatcgccg 322 ||||||||||||||||| |||||| Sbjct: 5477032 ccgcctcctcctccgccgtcgccg 5477009
>emb|CR388124.15| Zebrafish DNA sequence from clone CH211-72C8 in linkage group 15, complete sequence Length = 173535 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 ttccacctccagcagctctt 380 |||||||||||||||||||| Sbjct: 134260 ttccacctccagcagctctt 134241
>emb|CR665821.2|CNS0FCPV Tetraodon nigroviridis full-length cDNA Length = 1701 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 cgccgcccccaccgaggagg 337 |||||||||||||||||||| Sbjct: 989 cgccgcccccaccgaggagg 1008
>gb|AY051632.1| Drosophila melanogaster GH28308 full insert cDNA Length = 2118 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 297 caccgcctcctcctccgccatcgccgcc 324 |||| |||||||||||||||| |||||| Sbjct: 750 caccacctcctcctccgccattgccgcc 723
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 ggcgctcgcggccgcgtcgc 139 |||||||||||||||||||| Sbjct: 3563288 ggcgctcgcggccgcgtcgc 3563269
>gb|AY152827.1| Felis catus clone BAC 186b21 major histocompatiblity complex extended class II region, partial sequence Length = 146453 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ccgccgccgcgccgccacca 271 |||||||||||||||||||| Sbjct: 25889 ccgccgccgcgccgccacca 25908
>emb|BX063234.1|CNS09KYE Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC44DG08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 799 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 302 cctcctcctccgccatcgccgcccccac 329 ||||||||||||||| ||||||| |||| Sbjct: 300 cctcctcctccgccaccgccgccaccac 327
>emb|BX063233.1|CNS09KYD Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC44DG08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 931 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 302 cctcctcctccgccatcgccgcccccac 329 ||||||||||||||| ||||||| |||| Sbjct: 813 cctcctcctccgccaccgccgccaccac 786
>emb|BX040795.1|CNS093N3 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC11DC07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 771 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 302 cctcctcctccgccatcgccgcccccac 329 ||||||||||||||| ||||||| |||| Sbjct: 300 cctcctcctccgccaccgccgccaccac 327
>emb|BX040794.1|CNS093N2 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC11DC07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 923 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 302 cctcctcctccgccatcgccgcccccac 329 ||||||||||||||| ||||||| |||| Sbjct: 828 cctcctcctccgccaccgccgccaccac 801
>gb|AY124986.1| Rickettsia typhi putative VirB10 protein (virB10) gene, complete cds Length = 1551 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 caccgcctcctcctccgcca 316 |||||||||||||||||||| Sbjct: 390 caccgcctcctcctccgcca 409
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 147 cgtcgacccccgccgcgggcgccg 170 ||||||| |||||||||||||||| Sbjct: 1222159 cgtcgacgcccgccgcgggcgccg 1222182
>gb|AC132214.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0040M05, from chromosome 3, complete sequence Length = 153126 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 299 ccgcctcctcctccgccatcgccg 322 ||||||||||||||||| |||||| Sbjct: 20563 ccgcctcctcctccgccgtcgccg 20540
>gb|AC091221.3| Drosophila melanogaster 3L BAC RP98-9I19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 185790 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 297 caccgcctcctcctccgccatcgccgcc 324 |||| |||||||||||||||| |||||| Sbjct: 34228 caccacctcctcctccgccattgccgcc 34201
>gb|AC163712.3| Gallus gallus BAC clone CH261-29M9 from chromosome ul, complete sequence Length = 236367 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 cccccgccgcgggcgccgcg 172 |||||||||||||||||||| Sbjct: 189406 cccccgccgcgggcgccgcg 189425
>gb|DQ397617.1| Cenarchaeum symbiosum clone C21G04, complete sequence Length = 36742 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 297 caccgcctcctcctccgccatcgccgcc 324 ||||||||||||| |||||| ||||||| Sbjct: 16880 caccgcctcctccgccgccaccgccgcc 16907
>gb|DQ397616.1| Cenarchaeum symbiosum clone C20C07, complete sequence Length = 42246 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 297 caccgcctcctcctccgccatcgccgcc 324 ||||||||||||| |||||| ||||||| Sbjct: 14601 caccgcctcctccgccgccaccgccgcc 14628
>gb|DQ397591.1| Cenarchaeum symbiosum clone C01G08, complete sequence Length = 41923 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 297 caccgcctcctcctccgccatcgccgcc 324 ||||||||||||| |||||| ||||||| Sbjct: 27049 caccgcctcctccgccgccaccgccgcc 27076
>gb|AC010037.7| Drosophila melanogaster 3L BAC RP98-6E4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 187555 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 297 caccgcctcctcctccgccatcgccgcc 324 |||| |||||||||||||||| |||||| Sbjct: 88833 caccacctcctcctccgccattgccgcc 88806
>gb|AY118440.1| Drosophila melanogaster RH66493 full insert cDNA Length = 1749 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 caccgcctcctcctccgcca 316 |||||||||||||||||||| Sbjct: 1065 caccgcctcctcctccgcca 1084
>gb|AC123568.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1345H02, from chromosome 3, complete sequence Length = 145290 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 299 ccgcctcctcctccgccatcgccg 322 ||||||||||||||||| |||||| Sbjct: 73626 ccgcctcctcctccgccgtcgccg 73603
>gb|AC073392.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0072A12, complete sequence Length = 149347 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 301 gcctcctcctccgccatcgccgcc 324 ||||||||||||||||||| |||| Sbjct: 82724 gcctcctcctccgccatcgtcgcc 82747
>ref|NM_205967.1| Drosophila melanogaster SC35 CG5442-RA, transcript variant A (SC35), mRNA Length = 1002 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 caccgcctcctcctccgcca 316 |||||||||||||||||||| Sbjct: 393 caccgcctcctcctccgcca 374
>ref|NM_168258.1| Drosophila melanogaster estrogen-related receptor CG7404-RA, transcript variant A (ERR), mRNA Length = 2529 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 297 caccgcctcctcctccgccatcgccgcc 324 |||| |||||||||||||||| |||||| Sbjct: 750 caccacctcctcctccgccattgccgcc 723
>ref|NM_144355.2| Drosophila melanogaster SC35 CG5442-RB, transcript variant B (SC35), mRNA Length = 1094 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 caccgcctcctcctccgcca 316 |||||||||||||||||||| Sbjct: 497 caccgcctcctcctccgcca 478
>ref|NM_139926.1| Drosophila melanogaster estrogen-related receptor CG7404-RB, transcript variant B (ERR), mRNA Length = 2157 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 297 caccgcctcctcctccgccatcgccgcc 324 |||| |||||||||||||||| |||||| Sbjct: 378 caccacctcctcctccgccattgccgcc 351
>ref|NM_136895.2| Drosophila melanogaster CG13176-RA (CG13176), mRNA Length = 1740 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 caccgcctcctcctccgcca 316 |||||||||||||||||||| Sbjct: 1065 caccgcctcctcctccgcca 1084
>gb|AC084766.8| Oryza sativa chromosome 3 BAC OSJNBb0048D20 genomic sequence, complete sequence Length = 130306 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 299 ccgcctcctcctccgccatcgccgcccccacc 330 ||||||||||||||||| ||||||| ||||| Sbjct: 113865 ccgcctcctcctccgccgccgccgccgccacc 113834
>gb|AC165369.3| Gallus gallus BAC clone CH261-58G18 from chromosome ul, complete sequence Length = 208903 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 cccccgccgcgggcgccgcg 172 |||||||||||||||||||| Sbjct: 65702 cccccgccgcgggcgccgcg 65721
>gb|AY069584.1| Drosophila melanogaster LD32469 full length cDNA Length = 1055 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 caccgcctcctcctccgcca 316 |||||||||||||||||||| Sbjct: 428 caccgcctcctcctccgcca 409
>gb|AF359421.1|AF359421 Drosophila melanogaster estrogen-related receptor splice variant mRNA, complete cds, alternatively spliced Length = 1938 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 297 caccgcctcctcctccgccatcgccgcc 324 |||| |||||||||||||||| |||||| Sbjct: 378 caccacctcctcctccgccattgccgcc 351
>gb|AF359420.1|AF359420 Drosophila melanogaster estrogen-related receptor mRNA, complete cds, alternatively spliced Length = 2310 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 297 caccgcctcctcctccgccatcgccgcc 324 |||| |||||||||||||||| |||||| Sbjct: 750 caccacctcctcctccgccattgccgcc 723
>ref|XM_688038.1| PREDICTED: Danio rerio similar to Thyroid hormone receptor-associated protein complex 240 kDa component (Trap240) (Thyroid hormone receptor associated protein 1) (Vitamin D3 receptor-interacting protein complex component DRIP250) (DRIP 250) (Activator-recruited cofactor ... (LOC564707), mRNA Length = 5292 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 ttccacctccagcagctctt 380 |||||||||||||||||||| Sbjct: 2724 ttccacctccagcagctctt 2743
>gb|AF188480.1|AF188480 Macropodid herpesvirus 1 ICP0 (RL-2), ICP34.5 (RL-1), thymidylate synthase, and ICP4 (RS-1) genes, complete cds Length = 13610 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 gcctcctcctccgccatcgc 320 |||||||||||||||||||| Sbjct: 8964 gcctcctcctccgccatcgc 8983
>dbj|AB179121.1| Macaca fascicularis testis cDNA clone: QtsA-13154, similar to human regulatory factor X, 2 (influences HLA class IIexpression) (RFX2), transcript variant 1, mRNA, RefSeq: NM_000635.2 Length = 3688 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 cccctcctacctgccaccac 412 |||||||||||||||||||| Sbjct: 2809 cccctcctacctgccaccac 2828
>gb|AF319040.1|AF319040 Leishmania donovani ATP-dependent zinc metallopeptidase-like protein gene, complete cds Length = 1797 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 ccgcctcctcctccgccatc 318 |||||||||||||||||||| Sbjct: 1525 ccgcctcctcctccgccatc 1506
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 301 gcctcctcctccgccatcgccgcc 324 |||||||||||||||| ||||||| Sbjct: 13275591 gcctcctcctccgccaccgccgcc 13275568
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 301 gcctcctcctccgccatcgccgcc 324 ||||||||||||||||||| |||| Sbjct: 14610262 gcctcctcctccgccatcgtcgcc 14610285
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 303 ctcctcctccgccatcgccgcccccacc 330 |||||||||| ||||||||||| ||||| Sbjct: 34319881 ctcctcctcctccatcgccgccgccacc 34319854 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 299 ccgcctcctcctccgccatcgccgcccccacc 330 ||||||||||||||||| ||||||| ||||| Sbjct: 14769487 ccgcctcctcctccgccgccgccgccgccacc 14769456 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tcctcctccgccatcgccgc 323 |||||||||||||||||||| Sbjct: 6876435 tcctcctccgccatcgccgc 6876416 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 299 ccgcctcctcctccgccatcgccg 322 ||||||||||||||||| |||||| Sbjct: 5476247 ccgcctcctcctccgccgtcgccg 5476224
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 301 gcctcctcctccgccatcgccgcc 324 |||||||||||||||| ||||||| Sbjct: 2214581 gcctcctcctccgccaccgccgcc 2214558
>ref|XM_392158.2| PREDICTED: Apis mellifera similar to CG4013-PA, isoform A (LOC408617), mRNA Length = 2712 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 297 caccgcctcctcctccgccatcgccgcc 324 ||||||| |||||||||||| ||||||| Sbjct: 400 caccgccacctcctccgccaccgccgcc 373
>gb|AC007440.6|AC007440 Drosophila melanogaster, chromosome 2R, region 49A-49B, BAC clone BACR37I09, complete sequence Length = 184621 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 caccgcctcctcctccgcca 316 |||||||||||||||||||| Sbjct: 24643 caccgcctcctcctccgcca 24662
>gb|AF232775.1|AF232775 Drosophila melanogaster SR family splicing factor SC35 (SC35) mRNA, complete cds Length = 1030 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 caccgcctcctcctccgcca 316 |||||||||||||||||||| Sbjct: 428 caccgcctcctcctccgcca 409
>dbj|AP002820.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0702D12 Length = 137332 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 300 cgcctcctcctccgccatcgccgc 323 |||| ||||||||||||||||||| Sbjct: 99057 cgccgcctcctccgccatcgccgc 99034
>gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genomic sequence, complete sequence Length = 143205 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 303 ctcctcctccgccatcgccgcccccacc 330 |||||||||| ||||||||||| ||||| Sbjct: 105589 ctcctcctcctccatcgccgccgccacc 105616
>gb|AC105927.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1781E12, complete sequence Length = 120392 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tcctcctccgccatcgccgc 323 |||||||||||||||||||| Sbjct: 74473 tcctcctccgccatcgccgc 74454
>gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1017C11, complete sequence Length = 166072 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tcctcctccgccatcgccgc 323 |||||||||||||||||||| Sbjct: 45137 tcctcctccgccatcgccgc 45118
>dbj|AP002855.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0086P08 Length = 145312 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gtcgacccccgccgcgggcg 167 |||||||||||||||||||| Sbjct: 79787 gtcgacccccgccgcgggcg 79806
>dbj|AP000492.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0705D01 Length = 147174 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 302 cctcctcctccgccatcgccgcccccaccgag 333 |||||||||||||| ||||||| |||||||| Sbjct: 18714 cctcctcctccgccgccgccgccgccaccgag 18683
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 caccgcctcctcctccgcca 316 |||||||||||||||||||| Sbjct: 634635 caccgcctcctcctccgcca 634616
>dbj|AP003489.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0568D10 Length = 63101 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 311 ccgccatcgccgcccccaccgaggagga 338 |||||||||||||| ||||||| ||||| Sbjct: 41795 ccgccatcgccgccgccaccgacgagga 41768
>dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0089K24 Length = 154137 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 cccgccgccgcgccgccacc 270 |||||||||||||||||||| Sbjct: 108673 cccgccgccgcgccgccacc 108692
>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1174_D05 Length = 128525 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 ctcccgccgccgcgccgcca 268 |||||||||||||||||||| Sbjct: 112862 ctcccgccgccgcgccgcca 112881
>dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0666G04 Length = 141983 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 ctcccgccgccgcgccgcca 268 |||||||||||||||||||| Sbjct: 54665 ctcccgccgccgcgccgcca 54684
>dbj|AP003567.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0022N24 Length = 124062 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 cccgccgccgcgccgccacc 270 |||||||||||||||||||| Sbjct: 66087 cccgccgccgcgccgccacc 66068
>gb|AE005097.1| Halobacterium sp. NRC-1 section 128 of 170 of the complete genome Length = 16069 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gagctcgtggcgctcgcggc 131 |||||||||||||||||||| Sbjct: 2179 gagctcgtggcgctcgcggc 2160
>dbj|AP002048.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MXP5 Length = 35471 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 298 accgcctcctcctccgccatcgcc 321 |||||| ||||||||||||||||| Sbjct: 28256 accgccgcctcctccgccatcgcc 28233
>dbj|AP005721.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1123_E07 Length = 113187 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 301 gcctcctcctccgccatcgccgcc 324 |||||||||||||||| ||||||| Sbjct: 1530 gcctcctcctccgccaccgccgcc 1507
>dbj|AP005294.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1679_B08 Length = 142529 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 301 gcctcctcctccgccatcgccgcc 324 |||||||||||||||| ||||||| Sbjct: 129274 gcctcctcctccgccaccgccgcc 129251
>emb|AJ002974.1|CPAJ2974 Craterostigma plantigineum CDet11-24 gene Length = 3413 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 tctcccacaatctcacccct 294 |||||||||||||||||||| Sbjct: 2358 tctcccacaatctcacccct 2377
>dbj|AK109549.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-G08, full insert sequence Length = 1237 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 caccgcctcctcctccgcca 316 |||||||||||||||||||| Sbjct: 153 caccgcctcctcctccgcca 172
>dbj|AK107306.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-D02, full insert sequence Length = 1591 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 cccgccgccgcgccgccacc 270 |||||||||||||||||||| Sbjct: 184 cccgccgccgcgccgccacc 203
>dbj|AK102425.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093F08, full insert sequence Length = 647 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 303 ctcctcctccgccatcgccgcccccacc 330 |||||||||| ||||||||||| ||||| Sbjct: 115 ctcctcctcctccatcgccgccgccacc 88
>dbj|AK101660.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033057J01, full insert sequence Length = 1975 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 cccgccgccgcgccgccacc 270 |||||||||||||||||||| Sbjct: 973 cccgccgccgcgccgccacc 954
>dbj|AK073776.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067D04, full insert sequence Length = 854 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gtcgacccccgccgcgggcg 167 |||||||||||||||||||| Sbjct: 142 gtcgacccccgccgcgggcg 161
>dbj|AK073313.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027F03, full insert sequence Length = 1389 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 cccgccgccgcgccgccacc 270 |||||||||||||||||||| Sbjct: 679 cccgccgccgcgccgccacc 660
>dbj|AK072113.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123H08, full insert sequence Length = 2711 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 302 cctcctcctccgccatcgccgcccccaccgag 333 |||||||||||||| ||||||| |||||||| Sbjct: 513 cctcctcctccgccgccgccgccgccaccgag 482
>dbj|AK070744.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063J22, full insert sequence Length = 1924 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 cctcctccgccatcgccgcc 324 |||||||||||||||||||| Sbjct: 204 cctcctccgccatcgccgcc 185
>dbj|AK070075.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044P22, full insert sequence Length = 650 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 303 ctcctcctccgccatcgccgcccccacc 330 |||||||||| ||||||||||| ||||| Sbjct: 109 ctcctcctcctccatcgccgccgccacc 82
>dbj|AK062282.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-C06, full insert sequence Length = 1677 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 cccgccgccgcgccgccacc 270 |||||||||||||||||||| Sbjct: 969 cccgccgccgcgccgccacc 950
>gb|AE003636.4| Drosophila melanogaster chromosome 2L, section 45 of 83 of the complete sequence Length = 246231 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 caccgcctcctcctccgcca 316 |||||||||||||||||||| Sbjct: 34995 caccgcctcctcctccgcca 35014
>gb|AE003823.3| Drosophila melanogaster chromosome 2R, section 27 of 73 of the complete sequence Length = 292919 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 caccgcctcctcctccgcca 316 |||||||||||||||||||| Sbjct: 185993 caccgcctcctcctccgcca 186012
>gb|AE003556.3| Drosophila melanogaster chromosome 3L, section 29 of 83 of the complete sequence Length = 281917 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 297 caccgcctcctcctccgccatcgccgcc 324 |||| |||||||||||||||| |||||| Sbjct: 133234 caccacctcctcctccgccattgccgcc 133261
>gb|AC163101.9| Mus musculus chromosome 18, clone RP24-177G6, complete sequence Length = 154555 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 aaaccgaaaccccaaattgccctc 24 ||||| |||||||||||||||||| Sbjct: 25906 aaaccaaaaccccaaattgccctc 25929
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 301 gcctcctcctccgccatcgccgcc 324 ||||||||||||||||||| |||| Sbjct: 14618503 gcctcctcctccgccatcgtcgcc 14618526
>emb|AL662966.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035B13, complete sequence Length = 145234 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 301 gcctcctcctccgccatcgccgcc 324 |||||||||||||||| ||||||| Sbjct: 47690 gcctcctcctccgccaccgccgcc 47667
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 caccgcctcctcctccgcca 316 |||||||||||||||||||| Sbjct: 296796 caccgcctcctcctccgcca 296777 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,591,812 Number of Sequences: 3902068 Number of extensions: 3591812 Number of successful extensions: 102142 Number of sequences better than 10.0: 161 Number of HSP's better than 10.0 without gapping: 174 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 96219 Number of HSP's gapped (non-prelim): 5919 length of query: 417 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 395 effective length of database: 17,147,199,772 effective search space: 6773143909940 effective search space used: 6773143909940 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
