ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl45g11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK121389.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 7e-29
2gb|AF088901.1|AF088901 Lilium longiflorum actin bundling protein... 113 2e-22
3gb|AC151537.1| Oryza sativa (japonica cultivar-group) chromosome... 103 2e-19
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 103 2e-19
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 103 2e-19
6gb|AC137076.1| Genomic sequence for Oryza sativa, Nipponbare str... 103 2e-19
7ref|NM_115601.2| Arabidopsis thaliana VLN3 (VILLIN 3); actin bin... 101 9e-19
8gb|AY128932.1| Arabidopsis thaliana unknown protein (At3g57410) ... 101 9e-19
9gb|AY093052.1| Arabidopsis thaliana unknown protein (At3g57410) ... 101 9e-19
10gb|AF081203.1|AF081203 Arabidopsis thaliana villin 3 (VLN3) mRNA... 101 9e-19
11emb|AL133248.1|ATT8H10 Arabidopsis thaliana DNA chromosome 3, BA... 86 5e-14
12ref|NM_129738.3| Arabidopsis thaliana VLN2 (VILLIN 2); actin bin... 68 1e-08
13gb|AY133782.1| Arabidopsis thaliana clone U11765 putative villin... 68 1e-08
14gb|AY080601.1| Arabidopsis thaliana putative villin 2 protein (A... 68 1e-08
15gb|AC155282.1| Medicago truncatula chromosome 2 BAC clone mth2-6... 54 2e-04
16gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome... 52 8e-04
17dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 52 8e-04
18dbj|AK073497.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 8e-04
19dbj|AK072095.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 8e-04
20gb|AC125477.13| Medicago truncatula clone mth2-12j8, complete se... 46 0.047
21gb|AC125475.11| Medicago truncatula clone mth2-5j2, complete seq... 46 0.047
22gb|AC002339.3| Arabidopsis thaliana chromosome 2 clone T11A7 map... 46 0.047
23gb|AF081202.1|AF081202 Arabidopsis thaliana villin 2 (VLN2) mRNA... 46 0.047
24ref|NM_128543.2| Arabidopsis thaliana VLN1 (VILLIN 1); actin bin... 42 0.73
25ref|NM_001036367.1| Arabidopsis thaliana VLN1 (VILLIN 1); actin ... 42 0.73
26ref|XM_599021.2| PREDICTED: Bos taurus similar to advillin (LOC5... 42 0.73
27gb|AC007113.7| Arabidopsis thaliana chromosome 2 clone F6K5 map ... 42 0.73
28gb|AC005496.3| Arabidopsis thaliana chromosome 2 clone T27A16 ma... 42 0.73
29dbj|AK118185.1| Arabidopsis thaliana At2g29890 mRNA for putative... 42 0.73
30gb|AF081201.1|AF081201 Arabidopsis thaliana villin 1 (VLN1) mRNA... 42 0.73
31ref|NM_125114.1| Arabidopsis thaliana actin binding AT5G57320 mR... 40 2.9
32gb|AC112949.9| Mus musculus chromosome 17, clone RP23-294D3, com... 40 2.9
33gb|AC107792.10| Mus musculus chromosome 17, clone RP23-83F8, com... 40 2.9
34ref|XM_787208.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 2.9
35dbj|AB019233.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 2.9
36gb|J03515.1|DDISEV Slime mold (D.discoideum) severin mRNA, compl... 40 2.9 
>dbj|AK121389.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023128M19, full
           insert sequence
          Length = 3343

 Score =  135 bits (68), Expect = 7e-29
 Identities = 152/180 (84%)
 Strand = Plus / Plus

                                                                       
Query: 46  tccacttctggattgggaaagactcaagccaagatgaagctggcactgcagcaatcaaga 105
           ||||||| |||||||||||||| || || |||||||||||||| ||||||||||| ||||
Sbjct: 369 tccacttttggattgggaaagattctagtcaagatgaagctgggactgcagcaattaaga 428

                                                                       
Query: 106 cggttgaacttgattctgtacttgggggtcgtgcagtccagtatagggaactccaaggtt 165
           | |||||||||||  |  | || || ||||||||||| ||| | || ||||| ||||| |
Sbjct: 429 cagttgaacttgacaccatgctcggaggtcgtgcagtgcagcacagagaacttcaaggct 488

                                                                       
Query: 166 atgaatctgacaagttcctgtcatacttcaaaccttgcattatacctatggagggtggtt 225
           |||||||||| |||||||| || ||||| ||||| |||||||||||  ||||||| ||||
Sbjct: 489 atgaatctgataagttcctatcgtactttaaaccatgcattatacccttggagggaggtt 548
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>gb|AF088901.1|AF088901 Lilium longiflorum actin bundling protein ABP135 (Y5-7) mRNA,
           complete cds
          Length = 3295

 Score =  113 bits (57), Expect = 2e-22
 Identities = 135/161 (83%)
 Strand = Plus / Plus

                                                                       
Query: 48  cacttctggattgggaaagactcaagccaagatgaagctggcactgcagcaatcaagacg 107
           ||||| |||||||| || ||  |||||||||| |||||||| ||||| ||||||||||| 
Sbjct: 318 cacttttggattggcaaggatacaagccaagacgaagctggaactgctgcaatcaagact 377

                                                                       
Query: 108 gttgaacttgattctgtacttgggggtcgtgcagtccagtatagggaactccaaggttat 167
           |||||||||||| |||| ||||| || ||||| || ||| | || ||||| || ||| ||
Sbjct: 378 gttgaacttgatgctgtccttggaggacgtgctgttcagcacagagaacttcagggtcat 437

                                                    
Query: 168 gaatctgacaagttcctgtcatacttcaaaccttgcattat 208
           |||||||| ||||| || |||||||||| ||| ||||||||
Sbjct: 438 gaatctgataagtttctatcatacttcagaccctgcattat 478
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>gb|AC151537.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0087D01, complete sequence
          Length = 83225

 Score =  103 bits (52), Expect = 2e-19
 Identities = 124/148 (83%)
 Strand = Plus / Plus

                                                                         
Query: 78    gatgaagctggcactgcagcaatcaagacggttgaacttgattctgtacttgggggtcgt 137
             ||||||||||| ||||||||||| ||||| |||||||||||  |  | || || ||||||
Sbjct: 79938 gatgaagctgggactgcagcaattaagacagttgaacttgacaccatgctcggaggtcgt 79997

                                                                         
Query: 138   gcagtccagtatagggaactccaaggttatgaatctgacaagttcctgtcatacttcaaa 197
             ||||| ||| | || ||||| ||||| ||||||||||| |||||||| || ||||| |||
Sbjct: 79998 gcagtgcagcacagagaacttcaaggctatgaatctgataagttcctatcgtactttaaa 80057

                                         
Query: 198   ccttgcattatacctatggagggtggtt 225
             || |||||||||||  ||||||| ||||
Sbjct: 80058 ccatgcattatacccttggagggaggtt 80085
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  103 bits (52), Expect = 2e-19
 Identities = 124/148 (83%)
 Strand = Plus / Plus

                                                                            
Query: 78       gatgaagctggcactgcagcaatcaagacggttgaacttgattctgtacttgggggtcgt 137
                ||||||||||| ||||||||||| ||||| |||||||||||  |  | || || ||||||
Sbjct: 13617183 gatgaagctgggactgcagcaattaagacagttgaacttgacaccatgctcggaggtcgt 13617242

                                                                            
Query: 138      gcagtccagtatagggaactccaaggttatgaatctgacaagttcctgtcatacttcaaa 197
                ||||| ||| | || ||||| ||||| ||||||||||| |||||||| || ||||| |||
Sbjct: 13617243 gcagtgcagcacagagaacttcaaggctatgaatctgataagttcctatcgtactttaaa 13617302

                                            
Query: 198      ccttgcattatacctatggagggtggtt 225
                || |||||||||||  ||||||| ||||
Sbjct: 13617303 ccatgcattatacccttggagggaggtt 13617330
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  103 bits (52), Expect = 2e-19
 Identities = 124/148 (83%)
 Strand = Plus / Plus

                                                                            
Query: 78       gatgaagctggcactgcagcaatcaagacggttgaacttgattctgtacttgggggtcgt 137
                ||||||||||| ||||||||||| ||||| |||||||||||  |  | || || ||||||
Sbjct: 13612158 gatgaagctgggactgcagcaattaagacagttgaacttgacaccatgctcggaggtcgt 13612217

                                                                            
Query: 138      gcagtccagtatagggaactccaaggttatgaatctgacaagttcctgtcatacttcaaa 197
                ||||| ||| | || ||||| ||||| ||||||||||| |||||||| || ||||| |||
Sbjct: 13612218 gcagtgcagcacagagaacttcaaggctatgaatctgataagttcctatcgtactttaaa 13612277

                                            
Query: 198      ccttgcattatacctatggagggtggtt 225
                || |||||||||||  ||||||| ||||
Sbjct: 13612278 ccatgcattatacccttggagggaggtt 13612305
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>gb|AC137076.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
            OSJNBb0033D20, from chromosome 3, complete sequence
          Length = 128707

 Score =  103 bits (52), Expect = 2e-19
 Identities = 124/148 (83%)
 Strand = Plus / Plus

                                                                        
Query: 78   gatgaagctggcactgcagcaatcaagacggttgaacttgattctgtacttgggggtcgt 137
            ||||||||||| ||||||||||| ||||| |||||||||||  |  | || || ||||||
Sbjct: 7855 gatgaagctgggactgcagcaattaagacagttgaacttgacaccatgctcggaggtcgt 7914

                                                                        
Query: 138  gcagtccagtatagggaactccaaggttatgaatctgacaagttcctgtcatacttcaaa 197
            ||||| ||| | || ||||| ||||| ||||||||||| |||||||| || ||||| |||
Sbjct: 7915 gcagtgcagcacagagaacttcaaggctatgaatctgataagttcctatcgtactttaaa 7974

                                        
Query: 198  ccttgcattatacctatggagggtggtt 225
            || |||||||||||  ||||||| ||||
Sbjct: 7975 ccatgcattatacccttggagggaggtt 8002
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>ref|NM_115601.2| Arabidopsis thaliana VLN3 (VILLIN 3); actin binding AT3G57410
           (VLN3) mRNA, complete cds
          Length = 3479

 Score =  101 bits (51), Expect = 9e-19
 Identities = 141/171 (82%)
 Strand = Plus / Plus

                                                                       
Query: 54  tggattgggaaagactcaagccaagatgaagctggcactgcagcaatcaagacggttgaa 113
           |||||||| |||||  ||||||| ||||||||||| || |||||  ||||||| ||||||
Sbjct: 396 tggattggtaaagatacaagccaggatgaagctggaacagcagctgtcaagacagttgaa 455

                                                                       
Query: 114 cttgattctgtacttgggggtcgtgcagtccagtatagggaactccaaggttatgaatct 173
           |||||| | |  ||||| || || || ||||| ||| | ||| | |||||| ||||||||
Sbjct: 456 cttgatgcagctcttggaggccgagctgtccaatatcgtgaaattcaaggtcatgaatct 515

                                                              
Query: 174 gacaagttcctgtcatacttcaaaccttgcattatacctatggagggtggt 224
           ||||| ||| |||| |||||||| ||||||||||||||  | |||||||||
Sbjct: 516 gacaaattcttgtcttacttcaagccttgcattataccactagagggtggt 566
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>gb|AY128932.1| Arabidopsis thaliana unknown protein (At3g57410) mRNA, complete cds
          Length = 2999

 Score =  101 bits (51), Expect = 9e-19
 Identities = 141/171 (82%)
 Strand = Plus / Plus

                                                                       
Query: 54  tggattgggaaagactcaagccaagatgaagctggcactgcagcaatcaagacggttgaa 113
           |||||||| |||||  ||||||| ||||||||||| || |||||  ||||||| ||||||
Sbjct: 202 tggattggtaaagatacaagccaggatgaagctggaacagcagctgtcaagacagttgaa 261

                                                                       
Query: 114 cttgattctgtacttgggggtcgtgcagtccagtatagggaactccaaggttatgaatct 173
           |||||| | |  ||||| || || || ||||| ||| | ||| | |||||| ||||||||
Sbjct: 262 cttgatgcagctcttggaggccgagctgtccaatatcgtgaaattcaaggtcatgaatct 321

                                                              
Query: 174 gacaagttcctgtcatacttcaaaccttgcattatacctatggagggtggt 224
           ||||| ||| |||| |||||||| ||||||||||||||  | |||||||||
Sbjct: 322 gacaaattcttgtcttacttcaagccttgcattataccactagagggtggt 372
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>gb|AY093052.1| Arabidopsis thaliana unknown protein (At3g57410) mRNA, complete cds
          Length = 3548

 Score =  101 bits (51), Expect = 9e-19
 Identities = 141/171 (82%)
 Strand = Plus / Plus

                                                                       
Query: 54  tggattgggaaagactcaagccaagatgaagctggcactgcagcaatcaagacggttgaa 113
           |||||||| |||||  ||||||| ||||||||||| || |||||  ||||||| ||||||
Sbjct: 397 tggattggtaaagatacaagccaggatgaagctggaacagcagctgtcaagacagttgaa 456

                                                                       
Query: 114 cttgattctgtacttgggggtcgtgcagtccagtatagggaactccaaggttatgaatct 173
           |||||| | |  ||||| || || || ||||| ||| | ||| | |||||| ||||||||
Sbjct: 457 cttgatgcagctcttggaggccgagctgtccaatatcgtgaaattcaaggtcatgaatct 516

                                                              
Query: 174 gacaagttcctgtcatacttcaaaccttgcattatacctatggagggtggt 224
           ||||| ||| |||| |||||||| ||||||||||||||  | |||||||||
Sbjct: 517 gacaaattcttgtcttacttcaagccttgcattataccactagagggtggt 567
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>gb|AF081203.1|AF081203 Arabidopsis thaliana villin 3 (VLN3) mRNA, complete cds
          Length = 3335

 Score =  101 bits (51), Expect = 9e-19
 Identities = 141/171 (82%)
 Strand = Plus / Plus

                                                                       
Query: 54  tggattgggaaagactcaagccaagatgaagctggcactgcagcaatcaagacggttgaa 113
           |||||||| |||||  ||||||| ||||||||||| || |||||  ||||||| ||||||
Sbjct: 276 tggattggtaaagatacaagccaggatgaagctggaacagcagctgtcaagacagttgaa 335

                                                                       
Query: 114 cttgattctgtacttgggggtcgtgcagtccagtatagggaactccaaggttatgaatct 173
           |||||| | |  ||||| || || || ||||| ||| | ||| | |||||| ||||||||
Sbjct: 336 cttgatgcagctcttggaggccgagctgtccaatatcgtgaaattcaaggtcatgaatct 395

                                                              
Query: 174 gacaagttcctgtcatacttcaaaccttgcattatacctatggagggtggt 224
           ||||| ||| |||| |||||||| ||||||||||||||  | |||||||||
Sbjct: 396 gacaaattcttgtcttacttcaagccttgcattataccactagagggtggt 446
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>emb|AL133248.1|ATT8H10 Arabidopsis thaliana DNA chromosome 3, BAC clone T8H10
          Length = 87503

 Score = 85.7 bits (43), Expect = 5e-14
 Identities = 121/147 (82%)
 Strand = Plus / Minus

                                                                        
Query: 78   gatgaagctggcactgcagcaatcaagacggttgaacttgattctgtacttgggggtcgt 137
            ||||||||||| || |||||  ||||||| |||||||||||| | |  ||||| || || 
Sbjct: 3000 gatgaagctggaacagcagctgtcaagacagttgaacttgatgcagctcttggaggccga 2941

                                                                        
Query: 138  gcagtccagtatagggaactccaaggttatgaatctgacaagttcctgtcatacttcaaa 197
            || ||||| ||| | ||| | |||||| ||||||||||||| ||| |||| |||||||| 
Sbjct: 2940 gctgtccaatatcgtgaaattcaaggtcatgaatctgacaaattcttgtcttacttcaag 2881

                                       
Query: 198  ccttgcattatacctatggagggtggt 224
            ||||||||||||||  | |||||||||
Sbjct: 2880 ccttgcattataccactagagggtggt 2854
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>ref|NM_129738.3| Arabidopsis thaliana VLN2 (VILLIN 2); actin binding AT2G41740
           (VLN2) mRNA, complete cds
          Length = 3390

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 139/174 (79%)
 Strand = Plus / Plus

                                                                       
Query: 51  ttctggattgggaaagactcaagccaagatgaagctggcactgcagcaatcaagacggtt 110
           ||||||||||| |||||  ||||||| ||||||||||| || |||||  | || || |||
Sbjct: 405 ttctggattggtaaagatacaagccaggatgaagctggaacagcagctgttaaaacagtt 464

                                                                       
Query: 111 gaacttgattctgtacttgggggtcgtgcagtccagtatagggaactccaaggttatgaa 170
           ||||| ||| | || ||||| || ||||| |||||  |  ||||| | || ||| |||||
Sbjct: 465 gaactcgatgcagttcttggaggccgtgctgtccaacaccgggaaattcagggtcatgaa 524

                                                                 
Query: 171 tctgacaagttcctgtcatacttcaaaccttgcattatacctatggagggtggt 224
           |||||||| ||| |||| |||||||| || || ||||||||  | |||||||||
Sbjct: 525 tctgacaaattcttgtcttacttcaagccatgtattatacccttagagggtggt 578
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>gb|AY133782.1| Arabidopsis thaliana clone U11765 putative villin 2 protein
           (At2g41740) mRNA, complete cds
          Length = 2962

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 139/174 (79%)
 Strand = Plus / Plus

                                                                       
Query: 51  ttctggattgggaaagactcaagccaagatgaagctggcactgcagcaatcaagacggtt 110
           ||||||||||| |||||  ||||||| ||||||||||| || |||||  | || || |||
Sbjct: 193 ttctggattggtaaagatacaagccaggatgaagctggaacagcagctgttaaaacagtt 252

                                                                       
Query: 111 gaacttgattctgtacttgggggtcgtgcagtccagtatagggaactccaaggttatgaa 170
           ||||| ||| | || ||||| || ||||| |||||  |  ||||| | || ||| |||||
Sbjct: 253 gaactcgatgcagttcttggaggccgtgctgtccaacaccgggaaattcagggtcatgaa 312

                                                                 
Query: 171 tctgacaagttcctgtcatacttcaaaccttgcattatacctatggagggtggt 224
           |||||||| ||| |||| |||||||| || || ||||||||  | |||||||||
Sbjct: 313 tctgacaaattcttgtcttacttcaagccatgtattatacccttagagggtggt 366
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>gb|AY080601.1| Arabidopsis thaliana putative villin 2 protein (At2g41740) mRNA,
           complete cds
          Length = 3383

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 139/174 (79%)
 Strand = Plus / Plus

                                                                       
Query: 51  ttctggattgggaaagactcaagccaagatgaagctggcactgcagcaatcaagacggtt 110
           ||||||||||| |||||  ||||||| ||||||||||| || |||||  | || || |||
Sbjct: 396 ttctggattggtaaagatacaagccaggatgaagctggaacagcagctgttaaaacagtt 455

                                                                       
Query: 111 gaacttgattctgtacttgggggtcgtgcagtccagtatagggaactccaaggttatgaa 170
           ||||| ||| | || ||||| || ||||| |||||  |  ||||| | || ||| |||||
Sbjct: 456 gaactcgatgcagttcttggaggccgtgctgtccaacaccgggaaattcagggtcatgaa 515

                                                                 
Query: 171 tctgacaagttcctgtcatacttcaaaccttgcattatacctatggagggtggt 224
           |||||||| ||| |||| |||||||| || || ||||||||  | |||||||||
Sbjct: 516 tctgacaaattcttgtcttacttcaagccatgtattatacccttagagggtggt 569
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>gb|AC155282.1| Medicago truncatula chromosome 2 BAC clone mth2-63e12, complete sequence
          Length = 251117

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 108/135 (80%)
 Strand = Plus / Plus

                                                                          
Query: 78     gatgaagctggcactgcagcaatcaagacggttgaacttgattctgtacttgggggtcgt 137
              |||||||||||  ||||||| |||||||| ||||| || ||| | |  || || || |||
Sbjct: 134179 gatgaagctggtgctgcagccatcaagacagttgagctggatgcagctctcggaggacgt 134238

                                                                          
Query: 138    gcagtccagtatagggaactccaaggttatgaatctgacaagttcctgtcatacttcaaa 197
              || || |||||| ||||| | || ||  ||||| |||| |||||||| || || ||||||
Sbjct: 134239 gctgttcagtatcgggaagtacagggccatgaaactgaaaagttcctttcttatttcaaa 134298

                             
Query: 198    ccttgcattatacct 212
              ||||| |||||||||
Sbjct: 134299 ccttgtattatacct 134313
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>gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0072C16, complete sequence
          Length = 159525

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 168   gaatctgacaagttcctgtcatacttcaaaccttgcat 205
             ||||| ||||||||| |||||||||||||||| |||||
Sbjct: 85830 gaatccgacaagttcttgtcatacttcaaaccatgcat 85867
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                     
Query: 168     gaatctgacaagttcctgtcatacttcaaaccttgcat 205
               ||||| ||||||||| |||||||||||||||| |||||
Sbjct: 2991814 gaatccgacaagttcttgtcatacttcaaaccatgcat 2991851
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>dbj|AK073497.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045E20, full
           insert sequence
          Length = 3074

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 168 gaatctgacaagttcctgtcatacttcaaaccttgcat 205
           ||||| ||||||||| |||||||||||||||| |||||
Sbjct: 581 gaatccgacaagttcttgtcatacttcaaaccatgcat 618
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>dbj|AK072095.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116C18, full
           insert sequence
          Length = 2781

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 168 gaatctgacaagttcctgtcatacttcaaaccttgcat 205
           ||||| ||||||||| |||||||||||||||| |||||
Sbjct: 443 gaatccgacaagttcttgtcatacttcaaaccatgcat 480
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>gb|AC125477.13| Medicago truncatula clone mth2-12j8, complete sequence
          Length = 127843

 Score = 46.1 bits (23), Expect = 0.047
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 177   aagttcctgtcatacttcaaaccttgcattatacc 211
             |||||||||||||| |||||||| || ||||||||
Sbjct: 74128 aagttcctgtcatatttcaaaccatgtattatacc 74094
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>gb|AC125475.11| Medicago truncatula clone mth2-5j2, complete sequence
          Length = 165679

 Score = 46.1 bits (23), Expect = 0.047
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 177   aagttcctgtcatacttcaaaccttgcattatacc 211
             |||||||||||||| |||||||| || ||||||||
Sbjct: 13824 aagttcctgtcatatttcaaaccatgtattatacc 13858
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>gb|AC002339.3| Arabidopsis thaliana chromosome 2 clone T11A7 map CIC11C08, complete
             sequence
          Length = 91071

 Score = 46.1 bits (23), Expect = 0.047
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                        
Query: 166   atgaatctgacaagttcctgtcatacttcaaaccttgcattatacctatggagggtggt 224
             ||||||||||||| ||| |||| |||||||| || || ||||||||  | |||||||||
Sbjct: 64312 atgaatctgacaaattcttgtcttacttcaagccatgtattatacccttagagggtggt 64370
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>gb|AF081202.1|AF081202 Arabidopsis thaliana villin 2 (VLN2) mRNA, complete cds
          Length = 3107

 Score = 46.1 bits (23), Expect = 0.047
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                      
Query: 166 atgaatctgacaagttcctgtcatacttcaaaccttgcattatacctatggagggtggt 224
           ||||||||||||| ||| |||| |||||||| || || ||||||||  | |||||||||
Sbjct: 308 atgaatctgacaaattcttgtcttacttcaagccatgtattatacccttagagggtggt 366
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>ref|NM_128543.2| Arabidopsis thaliana VLN1 (VILLIN 1); actin binding AT2G29890
           (VLN1) transcript variant AT2G29890.1 mRNA, complete cds
          Length = 2828

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 172 ctgacaagttcctgtcatacttcaaaccttgcattatacct 212
           |||| ||||| || || |||||||||||||| |||||||||
Sbjct: 320 ctgagaagtttctctcttacttcaaaccttgtattatacct 360
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>ref|NM_001036367.1| Arabidopsis thaliana VLN1 (VILLIN 1); actin binding AT2G29890
           (VLN1) transcript variant AT2G29890.2 mRNA, complete cds
          Length = 3074

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 172 ctgacaagttcctgtcatacttcaaaccttgcattatacct 212
           |||| ||||| || || |||||||||||||| |||||||||
Sbjct: 470 ctgagaagtttctctcttacttcaaaccttgtattatacct 510
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>ref|XM_599021.2| PREDICTED: Bos taurus similar to advillin (LOC520771), mRNA
          Length = 2919

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 46  tccacttctggattgggaaagactc 70
           ||||||||||||||||||| |||||
Sbjct: 176 tccacttctggattgggaaggactc 200
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>gb|AC007113.7| Arabidopsis thaliana chromosome 2 clone F6K5 map m283, complete
            sequence
          Length = 18372

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 172  ctgacaagttcctgtcatacttcaaaccttgcattatacct 212
            |||| ||||| || || |||||||||||||| |||||||||
Sbjct: 3026 ctgagaagtttctctcttacttcaaaccttgtattatacct 3066
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>gb|AC005496.3| Arabidopsis thaliana chromosome 2 clone T27A16 map mi54, complete
            sequence
          Length = 90665

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 172  ctgacaagttcctgtcatacttcaaaccttgcattatacct 212
            |||| ||||| || || |||||||||||||| |||||||||
Sbjct: 3435 ctgagaagtttctctcttacttcaaaccttgtattatacct 3395
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>dbj|AK118185.1| Arabidopsis thaliana At2g29890 mRNA for putative villin 1 (VLN1),
           complete cds, clone: RAFL19-50-M09
          Length = 2986

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 172 ctgacaagttcctgtcatacttcaaaccttgcattatacct 212
           |||| ||||| || || |||||||||||||| |||||||||
Sbjct: 469 ctgagaagtttctctcttacttcaaaccttgtattatacct 509
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>gb|AF081201.1|AF081201 Arabidopsis thaliana villin 1 (VLN1) mRNA, complete cds
          Length = 2806

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 172 ctgacaagttcctgtcatacttcaaaccttgcattatacct 212
           |||| ||||| || || |||||||||||||| |||||||||
Sbjct: 320 ctgagaagtttctctcttacttcaaaccttgtattatacct 360
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>ref|NM_125114.1| Arabidopsis thaliana actin binding AT5G57320 mRNA, complete cds
          Length = 2889

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 189 tacttcaaaccttgcattatacct 212
           ||||||||||||||||| ||||||
Sbjct: 337 tacttcaaaccttgcataatacct 360
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>gb|AC112949.9| Mus musculus chromosome 17, clone RP23-294D3, complete sequence
          Length = 169739

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 145   agtatagggaactccaaggt 164
             ||||||||||||||||||||
Sbjct: 24801 agtatagggaactccaaggt 24820
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>gb|AC107792.10| Mus musculus chromosome 17, clone RP23-83F8, complete sequence
          Length = 253013

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 145 agtatagggaactccaaggt 164
           ||||||||||||||||||||
Sbjct: 378 agtatagggaactccaaggt 359
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>ref|XM_787208.1| PREDICTED: Strongylocentrotus purpuratus similar to CG1106-PB,
           isoform B (LOC587480), partial mRNA
          Length = 685

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 42  gacgtccacttctggattgg 61
           ||||||||||||||||||||
Sbjct: 410 gacgtccacttctggattgg 429
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>dbj|AB019233.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJB24
          Length = 58589

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 189   tacttcaaaccttgcattatacct 212
             ||||||||||||||||| ||||||
Sbjct: 37350 tacttcaaaccttgcataatacct 37373
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>gb|J03515.1|DDISEV Slime mold (D.discoideum) severin mRNA, complete cds
          Length = 1233

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 75  caagatgaagctggcactgc 94
           ||||||||||||||||||||
Sbjct: 353 caagatgaagctggcactgc 372


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,610,160
Number of Sequences: 3902068
Number of extensions: 1610160
Number of successful extensions: 104777
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104606
Number of HSP's gapped (non-prelim): 157
length of query: 226
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 204
effective length of database: 17,147,199,772
effective search space: 3498028753488
effective search space used: 3498028753488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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