ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl45g10 |
|---|---|
| Clone Library Name | barley_pub |
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 94.4 bits (233), Expect = 7e-20 Identities = 46/65 (70%), Positives = 55/65 (84%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 253 +GGI+ LTG + A LKGS+VLMRKNALD NDFGATV+DG++E LGRGVTCQL+SS+ V Sbjct: 2 LGGIIGGLTGN-KNARLKGSLVLMRKNALDINDFGATVIDGISEFLGRGVTCQLVSSSLV 60 Query: 254 DHNNG 268 D NNG Sbjct: 61 DPNNG 65
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 94.0 bits (232), Expect = 9e-20 Identities = 43/65 (66%), Positives = 53/65 (81%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 253 +GG++ LTG + A LKG+VVLMRKN LD NDFGAT++DG+ E LG+GVTCQLISST V Sbjct: 3 LGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTAV 62 Query: 254 DHNNG 268 D +NG Sbjct: 63 DQDNG 67
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 93.2 bits (230), Expect = 2e-19 Identities = 44/65 (67%), Positives = 53/65 (81%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 253 +GGI+ +TG + + LKG+VVLMRKN LD NDFGATV+DG+ E LG+GVTCQLISST V Sbjct: 2 LGGIIDTITGSSKQSRLKGTVVLMRKNVLDLNDFGATVIDGLGEFLGKGVTCQLISSTAV 61 Query: 254 DHNNG 268 D NNG Sbjct: 62 DPNNG 66
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 58.5 bits (140), Expect = 4e-09 Identities = 32/66 (48%), Positives = 45/66 (68%), Gaps = 1/66 (1%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLIS-STN 250 +GGIV + G +KG V+LM+KN LDF + GA+V+DG+++LLG+ V+ QLIS S N Sbjct: 3 LGGIVDAILGKDDRPKVKGRVILMKKNVLDFINIGASVVDGISDLLGQKVSIQLISGSVN 62 Query: 251 VDHNNG 268 D G Sbjct: 63 YDGLEG 68
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 58.2 bits (139), Expect = 6e-09 Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 5/67 (7%) Frame = +2 Query: 83 IVSDLTGGLRGAH-----LKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISST 247 ++ L GGL G H +KG+VV+M+KNALDF D ++ D + E LG+ V+ QLISS Sbjct: 1 MLGQLVGGLIGGHHDSKKVKGTVVMMKKNALDFTDLAGSLTDKIFEALGQKVSFQLISSV 60 Query: 248 NVDHNNG 268 D NG Sbjct: 61 QSDPANG 67
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 57.8 bits (138), Expect = 7e-09 Identities = 29/64 (45%), Positives = 40/64 (62%) Frame = +2 Query: 74 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 253 +GG+ LTG G +KG VLM + LD DF A+++D V E+ G +TCQL+S+T Sbjct: 2 LGGLKDKLTGK-NGNKIKGLAVLMSRKLLDPRDFTASLLDNVHEVFGNSITCQLVSATVA 60 Query: 254 DHNN 265 D NN Sbjct: 61 DQNN 64
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 57.0 bits (136), Expect = 1e-08 Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 3/61 (4%) Frame = +2 Query: 95 LTGG---LRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVDHNN 265 LTGG +KG+VVLM+KN LDFNDF A+ +D + E LG +T +L+SS D N Sbjct: 9 LTGGGNETTTKKVKGTVVLMKKNVLDFNDFNASFLDRLHEFLGNKITLRLVSSDVTDSEN 68 Query: 266 G 268 G Sbjct: 69 G 69
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 52.8 bits (125), Expect = 2e-07 Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 5/67 (7%) Frame = +2 Query: 83 IVSDLTGGLRGAH-----LKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISST 247 ++ +T GL G H +KG+VV+M KN LDF D ++ + ++LG+ V+ QLISS Sbjct: 1 MIGQITSGLFGGHDDSKKVKGTVVMMNKNVLDFTDLAGSLTGKIFDVLGQKVSFQLISSV 60 Query: 248 NVDHNNG 268 D NG Sbjct: 61 QGDPTNG 67
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 48.5 bits (114), Expect = 4e-06 Identities = 32/76 (42%), Positives = 42/76 (55%), Gaps = 19/76 (25%) Frame = +2 Query: 92 DLTGGLRGAH-LKGSVVLMRKNALDFN--------------DFGATV----MDGVTELLG 214 ++TG L H ++G+VVLMRKN LDFN D G + +DG+T LG Sbjct: 4 NVTGLLNKGHKIRGTVVLMRKNVLDFNTIVSIGGGNVHGVIDSGINIIGSTLDGLTAFLG 63 Query: 215 RGVTCQLISSTNVDHN 262 R V+ QLIS+T D N Sbjct: 64 RSVSLQLISATKSDAN 79
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 47.4 bits (111), Expect = 1e-05 Identities = 31/70 (44%), Positives = 39/70 (55%), Gaps = 14/70 (20%) Frame = +2 Query: 89 SDLTGGL-RGAHLKGSVVLMRKNALDFN-------------DFGATVMDGVTELLGRGVT 226 S +TG L RG +KG+VVLMRKN LD N D + +D +T LGR V+ Sbjct: 3 SGVTGILNRGHKIKGTVVLMRKNVLDINSLTTVGGVIGQGFDILGSTVDNLTAFLGRSVS 62 Query: 227 CQLISSTNVD 256 QLIS+T D Sbjct: 63 LQLISATKPD 72
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 46.2 bits (108), Expect = 2e-05 Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 15/71 (21%) Frame = +2 Query: 95 LTGGL--RGAHLKGSVVLMRKNALDFN-------------DFGATVMDGVTELLGRGVTC 229 + GGL RG +KG+VVLMRKN L N D + +D +T LGR V+ Sbjct: 1 MLGGLLHRGHKIKGTVVLMRKNVLHVNSVTSVGGIIGQGLDLVGSTLDTLTAFLGRPVSL 60 Query: 230 QLISSTNVDHN 262 QLIS+T D N Sbjct: 61 QLISATKADAN 71
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 46.2 bits (108), Expect = 2e-05 Identities = 32/80 (40%), Positives = 39/80 (48%), Gaps = 19/80 (23%) Frame = +2 Query: 65 MFGVGGIVSDLTGGLRGAH-LKGSVVLMRKNALDFNDFG------------------ATV 187 MF V G+ L G G H +KG+VVLMRKN LDFN + Sbjct: 1 MFSVPGVSGILNRG--GGHKIKGTVVLMRKNVLDFNSVADLTKGNVGGLIGTGLNVVGST 58 Query: 188 MDGVTELLGRGVTCQLISST 247 +D +T LGR V QLIS+T Sbjct: 59 LDNLTAFLGRSVALQLISAT 78
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 44.7 bits (104), Expect = 6e-05 Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 6/71 (8%) Frame = +2 Query: 74 VGGIVSDLTGGLRGA----HLKGSVVLMRKNALDFNDFGATVMDGVTELLG--RGVTCQL 235 V G LTG + A ++G+ VL++K+ L DF A+++DGV +LG GV +L Sbjct: 3 VQGFFDRLTGRNKEAWKEGRIRGTAVLVKKDVLGLGDFHASLLDGVHNILGHKEGVAFRL 62 Query: 236 ISSTNVDHNNG 268 +S+T D +NG Sbjct: 63 VSATARDPSNG 73
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 44.7 bits (104), Expect = 6e-05 Identities = 26/53 (49%), Positives = 33/53 (62%), Gaps = 1/53 (1%) Frame = +2 Query: 113 GAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVD-HNNG 268 G +KG+VVLM KN L+ N G+ V D + LGR V+ QLIS+T D H G Sbjct: 5 GHKIKGTVVLMPKNELEVNPDGSAV-DNLNAFLGRSVSLQLISATKADAHGKG 56
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 44.3 bits (103), Expect = 8e-05 Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 22/71 (30%) Frame = +2 Query: 110 RGAHLKGSVVLMRKNALDFNDFGAT----------------------VMDGVTELLGRGV 223 RG +KG+VVLM KN DFN+F +T ++DG T + R + Sbjct: 7 RGHKIKGTVVLMTKNVFDFNEFVSTTRGGIVGAAGGLFGAATDIVGGIVDGATAIFSRNI 66 Query: 224 TCQLISSTNVD 256 QLIS+T D Sbjct: 67 AIQLISATKTD 77
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 40.0 bits (92), Expect = 0.002 Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 22/71 (30%) Frame = +2 Query: 110 RGAHLKGSVVLMRKNALDFNDFGAT----------------------VMDGVTELLGRGV 223 +G +KG+VVLM KN LDFN + V+D T LGR + Sbjct: 7 KGQKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRNI 66 Query: 224 TCQLISSTNVD 256 + QLIS+T D Sbjct: 67 SMQLISATQTD 77
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 39.3 bits (90), Expect = 0.003 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 20/69 (28%) Frame = +2 Query: 110 RGAHLKGSVVLMRKNALDFN--------------------DFGATVMDGVTELLGRGVTC 229 RG LKG+V+LM+KN LD N +++D T LGR V Sbjct: 8 RGQKLKGTVILMQKNVLDINALTAAQSPSGIIGGAFGVVGSIAGSIIDTATAFLGRSVRL 67 Query: 230 QLISSTNVD 256 +LIS+T D Sbjct: 68 RLISATVAD 76
>PKHA4_HUMAN (Q9H4M7) Pleckstrin homology domain-containing family A member 4| (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1) Length = 779 Score = 33.9 bits (76), Expect = 0.11 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 5/55 (9%) Frame = -1 Query: 219 PRPRSSVT-----PSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRSLTMPPTP 70 PRPRS+ PS AP + + R+ PL W P+R ++L+ PPTP Sbjct: 246 PRPRSAPARRPPAPSGDTAPPARPHTPLSRIDVRPPLDWGPQR---QTLSRPPTP 297
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 33.5 bits (75), Expect = 0.15 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 13/68 (19%) Frame = +2 Query: 104 GLRGAHLKGSVVLMRKNALDFND-------------FGATVMDGVTELLGRGVTCQLISS 244 G +G +KG++V+M+KN LD N F + +D +T ++ QLIS+ Sbjct: 5 GQKGQKIKGTMVVMQKNVLDINSITSVGGIVDQGLGFIGSAVDALT-FAATKISIQLISA 63 Query: 245 TNVDHNNG 268 T D G Sbjct: 64 TKADGGKG 71
>UL14_EHV1V (P84404) Hypothetical gene 48 protein| Length = 317 Score = 30.8 bits (68), Expect = 0.94 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = -3 Query: 184 GGAEVVEVERVLAHEDDGAL-EVGAPEAPRQVAHDAADAKHLRSISGECGTLAKLARCGA 8 GG EV + + L HED+ L EAPR AAD RS + ARCGA Sbjct: 132 GGGEVGDPQEWLGHEDEALLMRWMLEEAPRVSTRIAADPHSPRSTCPAPRKAPEDARCGA 191
>UL14_EHV1B (P28949) Hypothetical gene 48 protein| Length = 317 Score = 30.8 bits (68), Expect = 0.94 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = -3 Query: 184 GGAEVVEVERVLAHEDDGAL-EVGAPEAPRQVAHDAADAKHLRSISGECGTLAKLARCGA 8 GG EV + + L HED+ L EAPR AAD RS + ARCGA Sbjct: 132 GGGEVGDPQEWLGHEDEALLMRWMLEEAPRVSTRIAADPHSPRSTCPAPRKAPEDARCGA 191
>USH1C_MOUSE (Q9ES64) Harmonin (Usher syndrome type-1C protein homolog) (PDZ| domain-containing protein) Length = 910 Score = 30.4 bits (67), Expect = 1.2 Identities = 19/54 (35%), Positives = 26/54 (48%) Frame = -1 Query: 225 VTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRSLTMPPTPNI 64 V P P S +PS AP L SS + ++ W R PP + +PP P+I Sbjct: 563 VMPHPPSVNSPSKVPAPPVLPSSGHVSSSSSP---WVQRTPP--PIPIPPPPSI 611
>TRPM2_HUMAN (O94759) Transient receptor potential cation channel subfamily M| member 2 (EC 3.6.1.13) (Long transient receptor potential channel 2) (LTrpC2) (LTrpC-2) (Transient receptor potential channel 7) (TrpC7) (Estrogen-responsive element-associated Length = 1503 Score = 29.6 bits (65), Expect = 2.1 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = +2 Query: 140 LMRKNALDFNDFGATVMDGVTELLGRGVTCQLISST 247 LM+K AL F+DF + G L G+TC+LI +T Sbjct: 856 LMKKAALYFSDFWNKLDVGAILLFVAGLTCRLIPAT 891
>NPAS3_HUMAN (Q8IXF0) Neuronal PAS domain protein 3 (Neuronal PAS3) (Member of| PAS protein 6) (MOP6) Length = 933 Score = 29.6 bits (65), Expect = 2.1 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = -1 Query: 222 TPRPRSSVTPSMTVAPKSLKSSAFLRMRTT 133 TP P S +PS+ +L+ S F+RM++T Sbjct: 241 TPEPVESTSPSLLTTDNTLERSFFIRMKST 270
>IWS1_XENTR (Q505H7) IWS1-like protein| Length = 909 Score = 29.6 bits (65), Expect = 2.1 Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 6/53 (11%) Frame = -3 Query: 187 DGGAEVVEVERVLAHEDDG-----ALEVGAPEAPRQVAH-DAADAKHLRSISG 47 DGGA V+ ER A +D+G E G+PE + H D D KH RS SG Sbjct: 15 DGGATPVQDERDSASDDEGNEREQRSEPGSPERQSEDEHSDIEDNKH-RSDSG 66
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 28.9 bits (63), Expect = 3.6 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Frame = -1 Query: 237 MSWQVTPRPRSSVT--PSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRSLTMPPT 73 M+ +TP P S+ T P+ T +P + ++ T P P PP + T+PPT Sbjct: 1504 MTTPITP-PASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPT 1559
>PYRH_DEIRA (Q9RU81) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate| kinase) (UMP kinase) Length = 245 Score = 28.9 bits (63), Expect = 3.6 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 4/44 (9%) Frame = +2 Query: 44 LPRDRAKMFGVGG----IVSDLTGGLRGAHLKGSVVLMRKNALD 163 L + R +FG G +D T LR + VVLM KNA+D Sbjct: 127 LEKGRVVIFGGGNGAPFFTTDTTSTLRALEIGADVVLMAKNAVD 170
>IWS1A_XENLA (Q6DE96) IWS1-like protein A| Length = 836 Score = 28.9 bits (63), Expect = 3.6 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 4/45 (8%) Frame = -3 Query: 187 DGGAEVVEVERVLAHEDDG---ALEVGAPEAPRQVAH-DAADAKH 65 DGGA V+ ER A +D+G E G+PE + H D D KH Sbjct: 13 DGGATPVQDERDSASDDEGNEQRSEPGSPEHQSEDEHSDVEDHKH 57
>Y091_NPVOP (O10341) Hypothetical 29.3 kDa protein (ORF92)| Length = 279 Score = 28.9 bits (63), Expect = 3.6 Identities = 19/51 (37%), Positives = 20/51 (39%) Frame = -1 Query: 222 TPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRSLTMPPTP 70 TP P S TPS T P S T P P P S T PP+P Sbjct: 136 TPSPTPSPTPSPTPTPSPTPSPTPTPSPTPSP---TPTPSPTPSPTPPPSP 183
>GLTB_MAIZE (P23225) Ferredoxin-dependent glutamate synthase, chloroplast| precursor (EC 1.4.7.1) (Fd-GOGAT) Length = 1616 Score = 28.5 bits (62), Expect = 4.7 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -3 Query: 115 APEAPRQVAHDAADAKHLRSISGECG 38 AP AP++ AAD H+ S G CG Sbjct: 74 APPAPQKPTQQAADLNHILSERGACG 99
>MCM3A_MOUSE (Q9WUU9) 80 kda MCM3-associated protein (GANP protein)| Length = 1971 Score = 28.5 bits (62), Expect = 4.7 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -1 Query: 219 PRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRS 91 P P SS TP++ V P + ++ L +T+P P+ PV S Sbjct: 1026 PPPASSATPALHVQPLAPAAAPSLLQASTQPEVLLPKPAPVYS 1068
>NPAS3_MOUSE (Q9QZQ0) Neuronal PAS domain protein 3 (Neuronal PAS3) (Member of| PAS protein 6) (MOP6) Length = 925 Score = 28.5 bits (62), Expect = 4.7 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = -1 Query: 222 TPRPRSSVTPSMTVAPKSLKSSAFLRMRTT 133 TP P + +PS+ +L+ S F+RM++T Sbjct: 246 TPEPVETTSPSLLTTDNTLERSFFIRMKST 275
>EXTN_SORBI (P24152) Extensin precursor (Proline-rich glycoprotein)| Length = 283 Score = 28.1 bits (61), Expect = 6.1 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = -1 Query: 219 PRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRSLTMPPTPNIF 61 P P++S P+ T +PK T+P + +PP T PPTP ++ Sbjct: 107 PPPKASTPPTYTPSPKP---------PATKPPTYPTPKPPA---TKPPTPPVY 147
>CI079_HUMAN (Q6ZUB1) Protein C9orf79| Length = 1445 Score = 28.1 bits (61), Expect = 6.1 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 3/61 (4%) Frame = -1 Query: 243 ELMSWQVTPRPR-SSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRS--LTMPPT 73 E + W + RP+ V PS+ +++ S + P W+P+ P+ +T P Sbjct: 565 EYLEWPLKKRPKWKRVLPSLLKKSQAVLSQPTAHLPQERPASWSPKSAPILPGVVTSPEL 624 Query: 72 P 70 P Sbjct: 625 P 625
>TBX10_MOUSE (Q810F8) T-box transcription factor TBX10 (T-box protein 10)| Length = 385 Score = 27.7 bits (60), Expect = 8.0 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%) Frame = -1 Query: 234 SWQVTPRPRSSV--TPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRSLTMPPTPNI 64 SW VTPRP S+ +++P LK SA T++ + R P + P P++ Sbjct: 257 SWPVTPRPLLSIPARSRSSLSPCLLKGSAEREKDTSKASASSSRTPTQPHNQLLPAPDV 315 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,207,642 Number of Sequences: 219361 Number of extensions: 398896 Number of successful extensions: 2194 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 2102 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2177 length of database: 80,573,946 effective HSP length: 65 effective length of database: 66,315,481 effective search space used: 1591571544 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
