ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl45g08 |
|---|---|
| Clone Library Name | barley_pub |
>AEX3_CAEEL (O02626) Regulator of presynaptic activity aex-3 (Aboc, expulsion| defective protein 3) Length = 1409 Score = 36.2 bits (82), Expect = 0.035 Identities = 38/111 (34%), Positives = 46/111 (41%), Gaps = 4/111 (3%) Frame = +3 Query: 105 PVTPRELGFTPFRNPPPQEGALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTPISLVKSI 284 PV PRE P RNPPP GA EG P L P V T TP +LV + Sbjct: 967 PVPPREAPPIPKRNPPPL-GAPPKVPEGARAPPPLPP---RPKVKTTAVDETPQNLVPNN 1022 Query: 285 HARLDAQIPVNADL-SQRKP---PAKATMLPKRDPPPLEGALPNSSEEIQN 425 + AD Q KP PA T LP P + LP +E +++ Sbjct: 1023 QPAQPSSPSFLADADEQTKPLLKPAPPTTLPVGKQEPCK-VLPTPNEPVRH 1072 Score = 30.4 bits (67), Expect = 1.9 Identities = 15/30 (50%), Positives = 19/30 (63%) Frame = +3 Query: 339 PPAKATMLPKRDPPPLEGALPNSSEEIQNP 428 PP +A +PKR+PPPL GA P E + P Sbjct: 969 PPREAPPIPKRNPPPL-GAPPKVPEGARAP 997
>VRP1_YEAST (P37370) Verprolin| Length = 817 Score = 35.0 bits (79), Expect = 0.079 Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 14/104 (13%) Frame = +3 Query: 114 PRELGFTPFRNPPPQEGALQNSSEGKIQAPELKP-----LAGSQAVPKTEGVSTPI---- 266 P++ P PPP A+ ++S ++A + P L + +VP + S P Sbjct: 342 PKKATSAPAPPPPPLPAAMSSASTNSVKATPVPPTLAPPLPNTTSVPPNKASSMPAPPPP 401 Query: 267 -----SLVKSIHARLDAQIPVNADLSQRKPPAKATMLPKRDPPP 383 + A + IP+ A L PP+ AT +P PPP Sbjct: 402 PPPPPGAFSTSSALSASSIPL-APLPPPPPPSVATSVPSAPPPP 444
>MINT_MOUSE (Q62504) Msx2-interacting protein (SPEN homolog)| (SMART/HDAC1-associated repressor protein) Length = 3644 Score = 33.9 bits (76), Expect = 0.18 Identities = 30/117 (25%), Positives = 47/117 (40%), Gaps = 7/117 (5%) Frame = +3 Query: 105 PVTPRELGFTPFRNPPPQEGALQNSSEGKIQA-----PELKPLAGSQAVPKTEGVSTPIS 269 P P E F P + PP + + +NS+ K P L PL SQ +G Sbjct: 2390 PSPPAECTFDPSKTPPAESLSQENSAAEKTPCKAPVLPALPPL--SQPALMDDGPQARF- 2446 Query: 270 LVKSIHARLDAQIPVNADLSQRKPPAKATM--LPKRDPPPLEGALPNSSEEIQNPEW 434 +H+ +++ PV PP + + K PP + G +P+ S + EW Sbjct: 2447 ---KVHSIIESD-PVTPPSDSGIPPPTIPLVTIAKLPPPVIPGGVPHQSPPPKVTEW 2499
>RCOR2_XENLA (Q6NRZ0) REST corepressor 2| Length = 503 Score = 33.1 bits (74), Expect = 0.30 Identities = 25/97 (25%), Positives = 37/97 (38%), Gaps = 8/97 (8%) Frame = +3 Query: 144 NPPPQEGALQNSSEGKIQAPELKP--------LAGSQAVPKTEGVSTPISLVKSIHARLD 299 +PPP + N + G Q P + + SQ P + +SL + L Sbjct: 393 SPPPASTDMSNKTSGSSQTPNEEDDEVQITSVSSSSQPAPPAAAAAASLSLPPPL---LR 449 Query: 300 AQIPVNADLSQRKPPAKATMLPKRDPPPLEGALPNSS 410 IP L ++ PP + L + PPPL P S Sbjct: 450 PAIPCAPTLHRQPPPLQPGRLLQPRPPPLVRPAPRQS 486
>TEGU_EBV (P03186) Large tegument protein| Length = 3149 Score = 32.7 bits (73), Expect = 0.39 Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 5/103 (4%) Frame = +3 Query: 135 PFRNPPPQEGALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTPISLVKSIHARLDAQIPV 314 P + P P A ++ + + P P A A P T +S P + + + A P+ Sbjct: 499 PLQIPIPLPQAAPSNPKIPLTTPSPSPTAA--AAPTTTTLSPPPTQQQPPQSAAPAPSPL 556 Query: 315 NADLSQRKP-----PAKATMLPKRDPPPLEGALPNSSEEIQNP 428 L Q++P PA + +LP++ PPP P+ Q P Sbjct: 557 ---LPQQQPTPSAAPAPSPLLPQQQPPPSAARAPSPLPPQQQP 596
>MKL2_HUMAN (Q9ULH7) MKL/myocardin-like protein 2 (Myocardin-related| transcription factor B) (MRTF-B) (Megakaryoblastic leukemia 2) Length = 1088 Score = 32.7 bits (73), Expect = 0.39 Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 21/124 (16%) Frame = +3 Query: 105 PVTPRELGFTPFRNPPPQEGALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTPISLVKSI 284 P TP + P PPPQ+ +Q+S G A P +A+ +T P+ + + Sbjct: 839 PNTPNK----PSSPPPPQQFVVQHSLFGSPVAKTKDPPRYEEAIKQTRSTQAPLPEISNA 894 Query: 285 HARL------------DAQIPVNAD---LSQRKP-PAKATMLP-----KRDPPPLEGALP 401 H++ + +P+ + +S+ +P A T +P R PP ++ A P Sbjct: 895 HSQQMDDLFDILIKSGEISLPIKEEPSPISKMRPVTASITTMPVNTVVSRPPPQVQMAPP 954 Query: 402 NSSE 413 S E Sbjct: 955 VSLE 958
>APA_MYCAV (Q48919) Alanine and proline-rich secreted protein apa precursor| (45/47 kDa antigen) (Fibronectin attachment protein) (FAP-A) Length = 381 Score = 32.3 bits (72), Expect = 0.51 Identities = 16/37 (43%), Positives = 21/37 (56%) Frame = +3 Query: 300 AQIPVNADLSQRKPPAKATMLPKRDPPPLEGALPNSS 410 A P A Q++PP + M+P R PPP GA PN + Sbjct: 72 AGAPAPAPNGQQRPPRRRRMIPTRAPPP-AGAPPNGA 107
>YLPM1_HUMAN (P49750) YLP motif-containing protein 1 (Nuclear protein ZAP3)| (ZAP113) Length = 1951 Score = 32.0 bits (71), Expect = 0.67 Identities = 26/79 (32%), Positives = 33/79 (41%) Frame = +3 Query: 150 PPQEGALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTPISLVKSIHARLDAQIPVNADLS 329 PPQE LQN+S P + P GS P G P S+V+ + +PV Sbjct: 1295 PPQESRLQNTS----SRPGMYPPPGSYRPPPPMG-KPPGSIVRPSAPPARSSVPVTRPPV 1349 Query: 330 QRKPPAKATMLPKRDPPPL 386 PP LP PPP+ Sbjct: 1350 PIPPPPPPPPLP--PPPPV 1366
>MLL3_HUMAN (Q8NEZ4) Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog| (Histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3) (EC 2.1.1.43) (Homologous to ALR protein) Length = 4911 Score = 31.6 bits (70), Expect = 0.87 Identities = 24/91 (26%), Positives = 38/91 (41%) Frame = +3 Query: 150 PPQEGALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTPISLVKSIHARLDAQIPVNADLS 329 PP G + +S + P P Q + G STP + L+ ++P N+D S Sbjct: 3632 PPTPGISETTSTPAVSTPSELPQQADQESVEPVGPSTPNMAAGQLCTELENKLP-NSDFS 3690 Query: 330 QRKPPAKATMLPKRDPPPLEGALPNSSEEIQ 422 Q P + + D +E P +EEI+ Sbjct: 3691 QATPNQQTYANSEVDKLSME--TPAKTEEIK 3719
>POLR_TYMVA (P20128) RNA replicase polyprotein (EC 2.7.7.48)| Length = 1844 Score = 30.8 bits (68), Expect = 1.5 Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 5/97 (5%) Frame = +3 Query: 102 LPVTPRELGFTPFRN--PPPQEGALQNSSEGKIQAPELKPLA---GSQAVPKTEGVSTPI 266 +P T L FTP + PP A + P P+A G+Q T TPI Sbjct: 567 IPRTTAFLPFTPTTSTAPPDHSEASLPPAFASTSVPRPPPVASSLGAQPPTTTAAPPTPI 626 Query: 267 SLVKSIHARLDAQIPVNADLSQRKPPAKATMLPKRDP 377 + H D + + + PP +++ +P P Sbjct: 627 EPTQRAHQNSDLTLESSTPIEPPPPPIQSSDIPPSAP 663
>SYNJ1_RAT (Q62910) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1574 Score = 30.8 bits (68), Expect = 1.5 Identities = 33/108 (30%), Positives = 47/108 (43%) Frame = +3 Query: 105 PVTPRELGFTPFRNPPPQEGALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTPISLVKSI 284 P + LG +P + P+ Q+ + + AP L P+ S+A +T G P+S S Sbjct: 1032 PSSSSGLGTSP--SSSPRTSPCQSPTAPEYSAPSL-PIRPSRAPSRTPG---PLS---SQ 1082 Query: 285 HARLDAQIPVNADLSQRKPPAKATMLPKRDPPPLEGALPNSSEEIQNP 428 A +D Q + SQ T+ PKR PPP A P Q P Sbjct: 1083 GAPVDTQPAAQKESSQ-------TIEPKRPPPPRPVAPPARPAPPQRP 1123
>SPAA_STRDO (P21979) Cell surface antigen I/II precursor| Length = 1528 Score = 30.4 bits (67), Expect = 1.9 Identities = 24/112 (21%), Positives = 50/112 (44%), Gaps = 9/112 (8%) Frame = +3 Query: 111 TPRELGFTPFRNPPPQEGALQNSSEGKIQAPELKPLAGSQAV---PKTEGVSTPISLVKS 281 +P+E G T ++ +G ++ S E + PE+K QA TE ++ ++ Sbjct: 117 SPQEAGVTVSQDATVNKGTVEPSDEANQKEPEIKDDYSKQAADIQKATEDYKASVAANQA 176 Query: 282 IHARLDAQIPV-----NADLSQRKPPAKATMLPKRDPPPL-EGALPNSSEEI 419 R++ +I DL+ K + +++ R P P+ E L + +++ Sbjct: 177 ETDRINQEIAAKKAQYEQDLAANKAEVERSLMRMRKPRPIYEAKLAQNQKDL 228
>RUSC1_MOUSE (Q8BG26) RUN and SH3 domain-containing protein 1| Length = 893 Score = 30.4 bits (67), Expect = 1.9 Identities = 20/63 (31%), Positives = 29/63 (46%) Frame = +3 Query: 195 QAPELKPLAGSQAVPKTEGVSTPISLVKSIHARLDAQIPVNADLSQRKPPAKATMLPKRD 374 + P L GS A P+ ++ K + +R AQ P + R PPA ++P R Sbjct: 343 ELPPTGSLGGSLAPPRE------VTTFKELRSRSRAQPP---PVPPRDPPAGWALVPPRP 393 Query: 375 PPP 383 PPP Sbjct: 394 PPP 396
>PI5PA_RAT (Q9JMC1) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC| 3.1.3.56) (Proline-rich inositol polyphosphate 5-phosphatase) Length = 1001 Score = 30.4 bits (67), Expect = 1.9 Identities = 33/117 (28%), Positives = 45/117 (38%), Gaps = 5/117 (4%) Frame = +3 Query: 96 RRLPVTPRELGFTPFRNPPPQEGALQNSS---EGKIQAPELKPLAGSQAVPKTEGVSTPI 266 R P PR P PPPQ L SS E ++P L +P + V P+ Sbjct: 283 RARPEAPRHSPEDPVLPPPPQTLPLDVSSGLPESGTRSPGLLSPTFRPGIPSNQTVPPPL 342 Query: 267 SLVKSIHARLDAQIPVNADLSQRKPPAKATMLPKRDPPPLEGALPNS--SEEIQNPE 431 +R ++ P + S PPA LP+ P +GA P S +Q E Sbjct: 343 PKPPRSPSRSPSRSP---NRSPCVPPAPEVALPR---PVTQGAGPGKCPSPNLQTQE 393
>PRP5_GIBZE (Q4IP34) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1227 Score = 30.0 bits (66), Expect = 2.5 Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 13/124 (10%) Frame = +3 Query: 99 RLPVTPRELGFTPFRNPPPQEGALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTPISLVK 278 +LP P E TP+ + E N +E + +A A + + + T K Sbjct: 387 KLPALPIEADDTPYADQDDDESDGDNFAENEEEAAAAARAAHERRLQAENQMDTAEEETK 446 Query: 279 SIHARLDAQIPVNADLSQRKPPAKATMLPKRDPPPLEGAL-------------PNSSEEI 419 + + +N + SQ +P + + + D PL+ + +++++I Sbjct: 447 PTDVETNGDVAMNNNASQPEPATQMEVDEEDDVDPLDAFMADLKQTDVRQPTKTSTTQKI 506 Query: 420 QNPE 431 Q PE Sbjct: 507 QEPE 510
>CT151_HUMAN (Q8NC74) Protein C20orf151| Length = 664 Score = 30.0 bits (66), Expect = 2.5 Identities = 26/99 (26%), Positives = 38/99 (38%), Gaps = 4/99 (4%) Frame = +3 Query: 147 PPPQEGALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTPISLVKSIH-ARLDAQIPVNA- 320 PP Q G L S + + VP+ E STP+ + + ++L P + Sbjct: 477 PPTQSGPLTRSPQALSNGTK------GTRVPEQEEASTPMDPSRPLPGSQLSLSSPGSTE 530 Query: 321 --DLSQRKPPAKATMLPKRDPPPLEGALPNSSEEIQNPE 431 D + PP P PP L+G S E+ PE Sbjct: 531 DEDTGRPLPPPHPQPPPHPQPPDLDGHPEPSKAEVLRPE 569
>SYNJ1_MOUSE (Q8CHC4) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1574 Score = 29.6 bits (65), Expect = 3.3 Identities = 31/108 (28%), Positives = 45/108 (41%) Frame = +3 Query: 105 PVTPRELGFTPFRNPPPQEGALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTPISLVKSI 284 P + LG +P + P+ Q+ + + AP L P+ S+A +T G + S Sbjct: 1032 PSSSSGLGTSP--SSSPRTSPCQSPTVPEYSAPSL-PIRPSRAPSRTPGPPS------SQ 1082 Query: 285 HARLDAQIPVNADLSQRKPPAKATMLPKRDPPPLEGALPNSSEEIQNP 428 + +D Q D SQ T+ PKR PPP A P Q P Sbjct: 1083 GSPVDTQPAAQKDSSQ-------TLEPKRPPPPRPVAPPARPAPPQRP 1123
>SYNJ1_HUMAN (O43426) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1575 Score = 29.6 bits (65), Expect = 3.3 Identities = 30/108 (27%), Positives = 45/108 (41%) Frame = +3 Query: 105 PVTPRELGFTPFRNPPPQEGALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTPISLVKSI 284 P + LG +P +P SEG + + ++P S+A +T G P + I Sbjct: 1032 PSSSSGLGTSPSSSPRTSPCQSPTISEGPVPSLPIRP---SRAPSRTPG--PPSAQSSPI 1086 Query: 285 HARLDAQIPVNADLSQRKPPAKATMLPKRDPPPLEGALPNSSEEIQNP 428 A+ +P +K PA+ + PKR PPP A P Q P Sbjct: 1087 DAQPATPLP-------QKDPAQP-LEPKRPPPPRPVAPPTRPAPPQRP 1126
>PSC_DROME (P35820) Polycomb group protein Psc (Protein posterior sex combs)| Length = 1601 Score = 29.6 bits (65), Expect = 3.3 Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 6/106 (5%) Frame = +3 Query: 87 DLARRLPVTPRELGFTPFRNP------PPQEGALQNSSEGKIQAPELKPLAGSQAVPKTE 248 +LA +LP +GF P +NP PP + + N+ Q+ + K + G Q+ P + Sbjct: 1311 ELAPKLPTLAPFVGFNPLQNPAAGKKVPPSKKS-PNAGAAAHQSGQQKLVNGGQSQPAQQ 1369 Query: 249 GVSTPISLVKSIHARLDAQIPVNADLSQRKPPAKATMLPKRDPPPL 386 S P A+ + Q + PP + K P P+ Sbjct: 1370 KTSPP--------AQKNQQQVKKVSKNPTPPPPSLPAVGKMMPHPV 1407
>IL16_SAISC (O62677) Interleukin-16 precursor (IL-16) (Lymphocyte| chemoattractant factor) (LCF) Length = 627 Score = 29.6 bits (65), Expect = 3.3 Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 1/82 (1%) Frame = +3 Query: 186 GKIQAPELKPLAGSQAVPKTEGVSTPISLVKSIHARLDAQIP-VNADLSQRKPPAKATML 362 GK + L L G AVP T L A +A P V+ + P++ T+ Sbjct: 171 GKHEGGRLPGLLGRGAVPTLAPQETEQVLPSGSPAASEATDPGVSESPPPGRQPSEKTLP 230 Query: 363 PKRDPPPLEGALPNSSEEIQNP 428 P P PL LP +EE Q P Sbjct: 231 PS--PDPLLRLLPTQTEESQGP 250
>EP400_HUMAN (Q96L91) E1A-binding protein p400 (EC 3.6.1.-) (p400 kDa| SWI2/SNF2-related protein) (Domino homolog) (hDomino) (CAG repeat protein 32) (Trinucleotide repeat-containing gene 12 protein) Length = 3160 Score = 29.3 bits (64), Expect = 4.3 Identities = 20/82 (24%), Positives = 34/82 (41%) Frame = +3 Query: 156 QEGALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTPISLVKSIHARLDAQIPVNADLSQR 335 Q+ Q ++ ++Q P+++ A S A K G TP L+K +L +Q Sbjct: 2780 QQQQQQTTTTSQVQVPQIQGQAQSPAQIKAVGKLTPEHLIKMQKQKLQMPPQPPPPQAQS 2839 Query: 336 KPPAKATMLPKRDPPPLEGALP 401 PP A + + P + P Sbjct: 2840 APPQPAAQVQVQTSQPPQQQSP 2861
>ERFB_ASPFU (Q4WWN2) Palmitoyltransferase erf2 (EC 2.3.1.-) (DHHC cysteine-rich| domain-containing protein erf2) (Ras protein acyltransferase) Length = 607 Score = 29.3 bits (64), Expect = 4.3 Identities = 20/73 (27%), Positives = 30/73 (41%) Frame = +3 Query: 210 KPLAGSQAVPKTEGVSTPISLVKSIHARLDAQIPVNADLSQRKPPAKATMLPKRDPPPLE 389 +P G P G+S+ ++ V S Q N +S R PP L +R PPP Sbjct: 17 QPALGIPRPPSVGGISSRMTDVASEDGE---QSQANTGISSR-PPQSQRSLSRRGPPPAR 72 Query: 390 GALPNSSEEIQNP 428 ++ S+ P Sbjct: 73 SSITAHSQMTSRP 85
>H1_ASCIM (Q9UV33) Histone H1| Length = 213 Score = 29.3 bits (64), Expect = 4.3 Identities = 23/92 (25%), Positives = 33/92 (35%), Gaps = 4/92 (4%) Frame = +3 Query: 138 FRNPPPQEGALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTPISLVKSIHARLDAQIPVN 317 F P G ++ + + K A KP A A PK + + K A A Sbjct: 83 FVQPKGPSGTVKLAKKEKAAAAPKKPAAKKAAAPKKDAAPKKAAAPKKAAAPKSAAAKKK 142 Query: 318 A----DLSQRKPPAKATMLPKRDPPPLEGALP 401 + +KP AK PK+ P+E P Sbjct: 143 LLDAKKAAAKKPAAKKAAAPKKVAAPVEKPAP 174
>CF170_HUMAN (Q96NH3) Protein C6orf170| Length = 1247 Score = 29.3 bits (64), Expect = 4.3 Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 5/84 (5%) Frame = +3 Query: 189 KIQAPELKPLAGSQAVPKTEGVSTPISLVKSIHAR---LDAQIPVNADLSQRKPPAKATM 359 K+ ++ +GS+ +P +G IS+ + I++ L I N S K K ++ Sbjct: 581 KLLDEDISIFSGSEMLPVVKGAF--ISVCRHIYSTCEGLQVLITYNLHESIAKAWKKTSL 638 Query: 360 LPKRDPPPLEG--ALPNSSEEIQN 425 L +R P P+EG ++ + S+E QN Sbjct: 639 LSERIPTPVEGSDSVSSVSQESQN 662
>X3CL1_HUMAN (P78423) Fractalkine precursor (CX3CL1) (Neurotactin) (CX3C| membrane-anchored chemokine) (Small inducible cytokine D1) Length = 397 Score = 28.9 bits (63), Expect = 5.7 Identities = 22/66 (33%), Positives = 26/66 (39%), Gaps = 5/66 (7%) Frame = +3 Query: 99 RLPVTPRE-----LGFTPFRNPPPQEGALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTP 263 RLP TP+ +G FR PP A SS P L A + P T+ ST Sbjct: 168 RLPPTPKAQDGGPVGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQ 227 Query: 264 ISLVKS 281 S S Sbjct: 228 ASTASS 233
>RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein| Length = 2480 Score = 28.9 bits (63), Expect = 5.7 Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 12/50 (24%) Frame = +3 Query: 150 PPQEGALQNSSEGKIQAPELK------------PLAGSQAVPKTEGVSTP 263 P EG Q SEG I+APE + P A +A P+ EGV TP Sbjct: 2263 PEAEGEAQPESEG-IEAPEAEGEAQPELEGVEAPEAEEEAQPEPEGVETP 2311
>EP400_MOUSE (Q8CHI8) E1A-binding protein p400 (EC 3.6.1.-) (p400 kDa| SWI2/SNF2-related protein) (Domino homolog) (mDomino) Length = 3072 Score = 28.9 bits (63), Expect = 5.7 Identities = 20/92 (21%), Positives = 38/92 (41%) Frame = +3 Query: 156 QEGALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTPISLVKSIHARLDAQIPVNADLSQR 335 Q+ Q ++Q P+L+ A S A K P ++K ++ L + Sbjct: 2690 QQQQQQQQQTSQVQVPQLQSQAQSPAQIKAVSKLGPEHIIKMQKQKMQ--------LPPQ 2741 Query: 336 KPPAKATMLPKRDPPPLEGALPNSSEEIQNPE 431 PP +A P + P ++ P ++ Q+P+ Sbjct: 2742 PPPPQAQPGPPQQPAQVQVQTPQPPQQQQSPQ 2773
>ISPH_THET2 (Q72G65) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC| 1.17.1.2) Length = 340 Score = 28.9 bits (63), Expect = 5.7 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%) Frame = +3 Query: 204 ELKP--LAGSQAVPKTEGVSTPISLVKSIHARLDAQIP 311 EL+P L G +++ T STP LV+ + ARL AQ P Sbjct: 273 ELRPEWLEGVESLGITSAASTPEDLVQGVVARLKAQNP 310
>Y046_UREPA (Q9PR99) Hypothetical protein UU046| Length = 791 Score = 28.5 bits (62), Expect = 7.4 Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Frame = +3 Query: 132 TPFRNPPPQEGALQNSSEGKIQA-----PELKPLAGSQAVPKTEGVSTPISLVKSIHARL 296 TPF +P P + + +I+ PE+KP + PK + + P V++ Sbjct: 88 TPFPDPIPTPPKKEELKKPEIKPEEPKKPEIKPEPIPK--PKPQPIPQPTPPVETK---- 141 Query: 297 DAQIPVNADLSQRKPPAKATMLPKRDPPPLEGALPNSS 410 P L PP K P+ DP P +PN S Sbjct: 142 ----PKEELLPPSPPPPKEEPKPEPDPQPQPQQIPNQS 175
>SF3A1_MOUSE (Q8K4Z5) Splicing factor 3 subunit 1 (SF3a120)| Length = 791 Score = 28.5 bits (62), Expect = 7.4 Identities = 27/101 (26%), Positives = 37/101 (36%) Frame = +3 Query: 102 LPVTPRELGFTPFRNPPPQEGALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTPISLVKS 281 +PV PR + R PP G++ I AP + + A P P +V + Sbjct: 592 VPVMPRPPMASVVRLPP---GSVIAPMPPIIHAPRINVVPMPPAAPPIMAPRPPPMIVPT 648 Query: 282 IHARLDAQIPVNADLSQRKPPAKATMLPKRDPPPLEGALPN 404 PV PA A M P PPP+E P+ Sbjct: 649 AFVPAPPVAPV---------PAPAPMPPVHPPPPMEDEPPS 680
>Y044_UREPA (Q9PRA1) Hypothetical protein UU044| Length = 782 Score = 28.5 bits (62), Expect = 7.4 Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 5/98 (5%) Frame = +3 Query: 132 TPFRNP---PPQEGALQNSS--EGKIQAPELKPLAGSQAVPKTEGVSTPISLVKSIHARL 296 TPF +P PP++ L+ + + PE+KP PK E + P +++ Sbjct: 88 TPFPDPIPTPPKKEELKKPDIKPEEPKKPEIKP------EPKPEPIPQPAPPIETK---- 137 Query: 297 DAQIPVNADLSQRKPPAKATMLPKRDPPPLEGALPNSS 410 P L PP K P+ +P P +PN+S Sbjct: 138 ----PKEELLPPNPPPPKEEPKPEPNPQPQPQQVPNNS 171
>MSH5_YEAST (Q12175) MutS protein homolog 5| Length = 901 Score = 28.5 bits (62), Expect = 7.4 Identities = 12/16 (75%), Positives = 12/16 (75%) Frame = -3 Query: 263 RCADALGFWNSLRSGK 216 RC DA GF N LRSGK Sbjct: 337 RCPDAFGFINQLRSGK 352
>KTNB1_STRPU (O61585) Katanin p80 WD40-containing subunit B1 (Katanin p80| subunit B1) (p80 katanin) Length = 690 Score = 28.5 bits (62), Expect = 7.4 Identities = 22/95 (23%), Positives = 35/95 (36%), Gaps = 13/95 (13%) Frame = +3 Query: 135 PFRNPPPQEGALQNSSEGKIQAPELKPLAGSQAVP---KTEGVSTPISLVKSIHARL--- 296 PF++PP A + + AP +QA P + + P+ + +R Sbjct: 419 PFKHPPKPAAAAAVAPVSRAPAPSASDWQPAQANPAPNRVPAATKPVPAQEVAPSRKPDP 478 Query: 297 -------DAQIPVNADLSQRKPPAKATMLPKRDPP 380 D P N D+ PPA A P+ + P Sbjct: 479 ISTIIPSDRNKPANLDMDAFLPPAHAQQAPRVNAP 513
>LAD1_MOUSE (P57016) Ladinin 1 (Lad-1) (Linear IgA disease autoantigen)| Length = 528 Score = 28.5 bits (62), Expect = 7.4 Identities = 19/64 (29%), Positives = 28/64 (43%) Frame = +3 Query: 237 PKTEGVSTPISLVKSIHARLDAQIPVNADLSQRKPPAKATMLPKRDPPPLEGALPNSSEE 416 P+T G S + A D P +A+ S PP KA+ P P L+ +P+ E+ Sbjct: 306 PQTTGGSQATTREPRGRALPDKSPPSSAEQSTPAPPTKASRFP---PITLQVKIPSKDED 362 Query: 417 IQNP 428 P Sbjct: 363 ADTP 366
>MAP1A_HUMAN (P78559) Microtubule-associated protein 1A (MAP 1A)| (Proliferation-related protein p80) [Contains: MAP1 light chain LC2] Length = 2805 Score = 28.5 bits (62), Expect = 7.4 Identities = 29/103 (28%), Positives = 37/103 (35%), Gaps = 8/103 (7%) Frame = +3 Query: 117 RELGFTPFRNPPPQEGALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTPISLVKSI-HAR 293 R L +P PP +E L S I P P Q VP G +PI K + H + Sbjct: 1771 RWLAESPVGLPPEEEDKLTRSPFEIISPPASPPEMVGQRVPSAPGQESPIPDPKLMPHMK 1830 Query: 294 LD-------AQIPVNADLSQRKPPAKATMLPKRDPPPLEGALP 401 + A IP + PPA + P P E P Sbjct: 1831 NEPTTPSWLADIPPWVPKDRPLPPAPLSPAPGPPTPAPESHTP 1873
>FATH_HUMAN (Q14517) Cadherin-related tumor suppressor homolog precursor (Protein| fat homolog) Length = 4590 Score = 28.5 bits (62), Expect = 7.4 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = +3 Query: 333 RKPPAKATMLPKRDPPPLEGALPNSSEEIQNPEW 434 RK A ++ P PPP + P+ S+ IQ P W Sbjct: 4298 RKAVAVCSVAPNLPPPPPSNS-PSDSDSIQKPSW 4330
>BAGS_BOMMO (Q9BLJ6) BAG domain-containing protein Samui| Length = 677 Score = 28.5 bits (62), Expect = 7.4 Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 3/98 (3%) Frame = +3 Query: 144 NPPPQEGALQNSSEGKIQAPELKPLAGSQAVPKT---EGVSTPISLVKSIHARLDAQIPV 314 +PPP + K +P +A P+T G S S ++PV Sbjct: 257 HPPPNFSRSFGTPFNKTYRQGPQPFVQQKAYPQTAFARGASPQRSQSPKPTDEHFVKVPV 316 Query: 315 NADLSQRKPPAKATMLPKRDPPPLEGALPNSSEEIQNP 428 + + + +PP++A P++ PP P S ++ Q P Sbjct: 317 HHETPKAEPPSRAQKSPQQHQPP----PPKSPQQHQPP 350
>ZADH1_HUMAN (Q8N8N7) Zinc-binding alcohol dehydrogenase domain-containing| protein 1 (EC 1.-.-.-) Length = 351 Score = 28.5 bits (62), Expect = 7.4 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = -1 Query: 382 GGGSRLGSMVAFAGGFLWLRSALTGICASNRACMLLTKLIG 260 G GS+ G FL S + GIC ++ C+LLT +G Sbjct: 162 GAAGACGSVAGQIGHFLGC-SRVVGICGTHEKCILLTSELG 201
>ZN366_HUMAN (Q8N895) Zinc finger protein 366| Length = 744 Score = 28.1 bits (61), Expect = 9.7 Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 2/86 (2%) Frame = +3 Query: 165 ALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTPISLVKSIHARLDAQIPVNADLSQRKPP 344 +L++ ++ +KP A T + TP +H L P S P Sbjct: 141 SLEHFGGKPVKQEPIKPSAVWPQPTPTPFLPTPYPYYPKVHPGL--MFPFFVPSSSPFPF 198 Query: 345 AKATMLPKRDPPPL--EGALPNSSEE 416 ++ T LPK+ P PL A P SEE Sbjct: 199 SRHTFLPKQPPEPLLPRKAEPQESEE 224
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2| (ALL1-related protein) Length = 5262 Score = 28.1 bits (61), Expect = 9.7 Identities = 31/127 (24%), Positives = 47/127 (37%), Gaps = 19/127 (14%) Frame = +3 Query: 93 ARRLPVTPRELGFTPFR--------------NPPPQEGALQNSSEGKIQAP-ELKPLAGS 227 A RL P EL +P +PPP+E L E +P E PL+ Sbjct: 464 ASRLSPPPEELPASPLPEALHLSRPLEESPLSPPPEESPLSPPPESSPFSPLEESPLSPP 523 Query: 228 QAVPKTEGVSTPISLVKSIHARL----DAQIPVNADLSQRKPPAKATMLPKRDPPPLEGA 395 + P + + TP+S ++ + + PP +A+ L PPP E Sbjct: 524 EESPPSPALETPLSPPPEASPLSPPFEESPLSPPPEELPTSPPPEASRL---SPPPEESP 580 Query: 396 LPNSSEE 416 + EE Sbjct: 581 MSPPPEE 587
>LNK_HUMAN (Q9UQQ2) Lymphocyte-specific adapter protein Lnk (Signal| transduction protein Lnk) (Lymphocyte adapter protein) Length = 575 Score = 28.1 bits (61), Expect = 9.7 Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 2/34 (5%) Frame = +3 Query: 333 RKPPAKATMLPKRDPPPLEGALP--NSSEEIQNP 428 R PPAKA P+ P P LP SSEE+ P Sbjct: 94 RGPPAKAEASPEPGPGPAAPGLPKARSSEELAPP 127
>I12R2_HUMAN (Q99665) Interleukin-12 receptor beta-2 chain precursor (IL-12| receptor beta-2) (IL-12R-beta2) Length = 862 Score = 28.1 bits (61), Expect = 9.7 Identities = 20/98 (20%), Positives = 41/98 (41%) Frame = +3 Query: 138 FRNPPPQEGALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTPISLVKSIHARLDAQIPVN 317 FR+PP + QA E + + + P + + ++ L+++ Sbjct: 718 FRHPPCSNWPQREKGIQGHQASEKDMMHSASSPPPPRALQAESRQLVDLYKVLESR---G 774 Query: 318 ADLSQRKPPAKATMLPKRDPPPLEGALPNSSEEIQNPE 431 +D P T+LP D P +G LP++ +++ + E Sbjct: 775 SDPKPENPACPWTVLPAGDLPTHDGYLPSNIDDLPSHE 812
>KRH2_DROME (Q9V447) Protein Kr-h2| Length = 276 Score = 28.1 bits (61), Expect = 9.7 Identities = 16/35 (45%), Positives = 17/35 (48%) Frame = +3 Query: 135 PFRNPPPQEGALQNSSEGKIQAPELKPLAGSQAVP 239 P PP EGA NSSE Q E + SQ VP Sbjct: 4 PTDQPPRSEGAQTNSSERSSQQQEQPQQSQSQNVP 38
>CXCC1_MOUSE (Q9CWW7) CpG-binding protein (PHD finger and CXXC domain-containing| protein 1) (CXXC finger protein 1) Length = 660 Score = 28.1 bits (61), Expect = 9.7 Identities = 19/53 (35%), Positives = 25/53 (47%) Frame = +3 Query: 105 PVTPRELGFTPFRNPPPQEGALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTP 263 PVTP E P R PP Q+ Q+ G+I+ E L+ P E +TP Sbjct: 229 PVTPSEALPRPRRPPPTQQQPQQSQKLGRIREDEGTVLSSVVKEP-PEATATP 280
>SYH_SYNPX (Q7U9Q6) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA| ligase) (HisRS) Length = 430 Score = 28.1 bits (61), Expect = 9.7 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = -1 Query: 433 HSGF*ISSDEFGSAPSRGGGSRLGSMVAFAGG 338 H+ F I+SD+ G+ + GG R ++A GG Sbjct: 264 HTAFEITSDQLGAQATVCGGGRYNGLIAQLGG 295
>ISPE_SYNJB (Q2JLP6) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC| 2.7.1.148) (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) Length = 311 Score = 28.1 bits (61), Expect = 9.7 Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 8/84 (9%) Frame = +3 Query: 207 LKPLAGSQAVP------KTEGVSTP--ISLVKSIHARLDAQIPVNADLSQRKPPAKATML 362 L+PLA + +P K GVST +S L A P L P L Sbjct: 155 LEPLADWEGIPVLLAKPKHLGVSTAWAYQAFRSRREILGATAPSEPALPTL--PQALAAL 212 Query: 363 PKRDPPPLEGALPNSSEEIQNPEW 434 ++DPP L +L N E++ PE+ Sbjct: 213 SRQDPPALARSLRNDLEQVVLPEY 236
>SCW1_SCHPO (O74452) Cell wall integrity protein scw1 (Strong cell wall protein| 1) Length = 561 Score = 28.1 bits (61), Expect = 9.7 Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 6/81 (7%) Frame = +3 Query: 174 NSSEGKIQAPELKPLAGSQAVP---KTEGVSTPISLVKS---IHARLDAQIPVNADLSQR 335 NS+ P L P + S+ P T STP S S IH R+ A P N + + + Sbjct: 363 NSAFSTTSPPPLTP-STSRDYPFSASTISPSTPFSAYSSSHGIHQRIPASTPTNTNPADQ 421 Query: 336 KPPAKATMLPKRDPPPLEGAL 398 PP + P E L Sbjct: 422 NPPCNTIYVGNLPPSTSEEEL 442
>HUTH_BACSK (Q5WAZ6) Histidine ammonia-lyase (EC 4.3.1.3) (Histidase)| Length = 500 Score = 28.1 bits (61), Expect = 9.7 Identities = 21/61 (34%), Positives = 27/61 (44%) Frame = -1 Query: 379 GGSRLGSMVAFAGGFLWLRSALTGICASNRACMLLTKLIGVLTPSVFGTA*DPARGFNSG 200 GG+ G +AFA FL + A G A R L+ + L P + PA G SG Sbjct: 323 GGNFHGEPIAFAMDFLCIAMAELGNIAERRVERLVNPQLNDLPPFL-----SPAPGLQSG 377 Query: 199 A 197 A Sbjct: 378 A 378
>EHMT2_HUMAN (Q96KQ7) Histone-lysine N-methyltransferase, H3 lysine-9 specific 3| (EC 2.1.1.43) (Histone H3-K9 methyltransferase 3) (H3-K9-HMTase 3) (Euchromatic histone-lysine N-methyltransferase 2) (HLA-B-associated transcript 8) (Protein G9a) Length = 1210 Score = 28.1 bits (61), Expect = 9.7 Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 1/66 (1%) Frame = +3 Query: 234 VPKTEGVSTPISLVKSIHARLDAQIPVNADLSQRKPPAKATMLPKRDP-PPLEGALPNSS 410 +P+ +GV+ P L +P AD SQ + P+R P PL + +S Sbjct: 548 IPRGDGVTPPAGTAAPAPPPLSQDVPGRADTSQPSARMRGHGEPRRPPCDPLADTIDSSG 607 Query: 411 EEIQNP 428 + P Sbjct: 608 PSLTLP 613
>NFH_MOUSE (P19246) Neurofilament triplet H protein (200 kDa neurofilament| protein) (Neurofilament heavy polypeptide) (NF-H) Length = 1090 Score = 28.1 bits (61), Expect = 9.7 Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 3/100 (3%) Frame = +3 Query: 141 RNPPPQEGALQNSSEGKIQAPELKPLAGSQAVPKTEGVSTPISLVKSIHARLDAQIPVNA 320 ++P + + S ++++PE P EG +P KS A+ PV Sbjct: 750 KSPAEAKSPAEAKSPIEVKSPE------KAKTPVKEGAKSPAE-AKSPEK---AKSPVKE 799 Query: 321 DLSQRKPPAKATMLPKRDPPPLEGALPNSSE---EIQNPE 431 D+ KPPA+A K P EGA P ++++PE Sbjct: 800 DI---KPPAEAKSPEKAKSPVKEGAKPPEKAKPLDVKSPE 836 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,052,991 Number of Sequences: 219361 Number of extensions: 1178142 Number of successful extensions: 4412 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 4120 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4396 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2511994855 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
