>R13L2_ARATH (Q9STE5) Putative disease resistance RPP13-like protein 2|
          Length = 847

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 22/66 (33%), Positives = 41/66 (62%)
 Frame = +3

Query: 105 QEYALIRGVRGDIQYINDELCSMQAFLTNLGTGDEEHDAQIQDWAKQIRDIAYDIEDCVD 284
           +E  ++ GV+ D++ +  EL  +Q +L N+   D+E +   ++W K + DIAYD+ED +D
Sbjct: 19  EEAPMLIGVKDDLEELKTELTCIQVYLKNVEVCDKEDEVS-KEWTKLVLDIAYDVEDVLD 77

Query: 285 DFAHRL 302
            +  +L
Sbjct: 78  TYFLKL 83

>R13L3_ARATH (Q9STE7) Putative disease resistance RPP13-like protein 3|
          Length = 847

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 20/67 (29%), Positives = 38/67 (56%)
 Frame = +3

Query: 108 EYALIRGVRGDIQYINDELCSMQAFLTNLGTGDEEHDAQIQDWAKQIRDIAYDIEDCVDD 287
           E   + GV+ D++ +  EL  +  +L ++   + E +   ++W K + DIAYDIED +D 
Sbjct: 20  EVLALMGVKDDLEELKTELTCIHGYLKDVEAREREDEVS-KEWTKLVLDIAYDIEDVLDT 78

Query: 288 FAHRLPD 308
           +  +L +
Sbjct: 79  YFLKLEE 85

>RPM1_ARATH (Q39214) Disease resistance protein RPM1 (Resistance to Pseudomonas|
           syringae protein 3)
          Length = 926

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
 Frame = +3

Query: 108 EYALIRGVRGDIQYINDELCSMQAFLTNL----GTGDEEHDAQI-QDWAKQIRDIAYDIE 272
           E  L+ GV G+I  +  EL  M++FL +     G G      Q+ Q +    RD+AY IE
Sbjct: 20  ETLLLSGVHGEIDKMKKELLIMKSFLEDTHKHGGNGSTTTTTQLFQTFVANTRDLAYQIE 79

Query: 273 DCVDDFAHRL 302
           D +D+F + +
Sbjct: 80  DILDEFGYHI 89

>RPP13_ARATH (Q9M667) Disease resistance protein RPP13 (Resistance to|
           Peronospora parasitica protein 13)
          Length = 835

 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 17/68 (25%), Positives = 39/68 (57%)
 Frame = +3

Query: 105 QEYALIRGVRGDIQYINDELCSMQAFLTNLGTGDEEHDAQIQDWAKQIRDIAYDIEDCVD 284
           +E ++   V+ D++ +  EL  +  +L ++   + E +   ++W+K + D AYD+ED +D
Sbjct: 19  EEASMFMAVKEDLEELKTELTCIHGYLKDVEAREREDEVS-KEWSKLVLDFAYDVEDVLD 77

Query: 285 DFAHRLPD 308
            +  +L +
Sbjct: 78  TYHLKLEE 85

>DRL13_ARATH (Q9XIF0) Putative disease resistance protein At1g59780|
          Length = 906

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
 Frame = +3

Query: 102 AQEYALIRGVRGDIQYINDELCSMQAFLTNLGTGDEEHDAQIQDWAKQIRDIAYDIEDCV 281
           +QEY   +GV   I  + D+L  + AFL++     ++  A  ++  ++I++I YD ED +
Sbjct: 23  SQEYERFQGVEEQITELRDDLKMLMAFLSD-ADAKKQTRALARNCLEEIKEITYDAEDII 81

Query: 282 DDFAHRLPDDPXXXXXXCCSSVNVLIYGILTWFP--RREIAVKI 407
           + F  +              SVN+     L  FP  RREIA++I
Sbjct: 82  EIFLLK-------------GSVNM---RSLACFPGGRREIALQI 109

>DRL4_ARATH (Q9SX38) Putative disease resistance protein At1g50180|
          Length = 839

 Score = 35.8 bits (81), Expect = 0.025
 Identities = 16/63 (25%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
 Frame = +3

Query: 105 QEYALIRGVRGDIQYINDELCSMQAFLTNLGTGDEEHDAQ-IQDWAKQIRDIAYDIEDCV 281
           +E   + G+   ++ + DEL  +  FL +    +++H+++ +++W   IR+ +YD ED +
Sbjct: 19  EEPLFLFGIGDQVKQLQDELKRLNCFLKD--ADEKQHESERVRNWVAGIREASYDAEDIL 76

Query: 282 DDF 290
           + F
Sbjct: 77  EAF 79

>DRL9_ARATH (Q8W3K0) Probable disease resistance protein At1g58602|
          Length = 1138

 Score = 35.8 bits (81), Expect = 0.025
 Identities = 17/66 (25%), Positives = 35/66 (53%)
 Frame = +3

Query: 102 AQEYALIRGVRGDIQYINDELCSMQAFLTNLGTGDEEHDAQIQDWAKQIRDIAYDIEDCV 281
           + EY L +GV   +  +  +L  +++FL +     +   A ++   ++I+DI YD ED +
Sbjct: 18  SHEYTLFQGVEDQVAELKSDLNLLKSFLKD-ADAKKHTSALVRYCVEEIKDIVYDAEDVL 76

Query: 282 DDFAHR 299
           + F  +
Sbjct: 77  ETFVQK 82

>RX24L_ARATH (Q9C646) Probable disease resistance protein RXW24L|
          Length = 899

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 17/64 (26%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
 Frame = +3

Query: 102 AQEYALIRGVRGDIQYINDELCSMQAFLTNLGTGDEEHDAQ-IQDWAKQIRDIAYDIEDC 278
           +QEY   +GV   +  +   L  +++FL +     ++H ++ ++   ++I+DI YD ED 
Sbjct: 16  SQEYDQFKGVEDQVTELKSNLNLLKSFLKDADA--KKHISEMVRHCVEEIKDIVYDTEDI 73

Query: 279 VDDF 290
           ++ F
Sbjct: 74  IETF 77

>RP8L1_ARATH (O04093) Putative disease resistance protein RPP8-like protein 1|
          Length = 821

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 15/62 (24%), Positives = 34/62 (54%)
 Frame = +3

Query: 105 QEYALIRGVRGDIQYINDELCSMQAFLTNLGTGDEEHDAQIQDWAKQIRDIAYDIEDCVD 284
           +E A + G+   +  +  +L  +Q+ L +      E + +++++ + +RDI YD ED ++
Sbjct: 19  RESARLNGIGEQVDGLKRQLGRLQSLLKDADAKKHESE-RVRNFLEDVRDIVYDAEDIIE 77

Query: 285 DF 290
            F
Sbjct: 78  SF 79

>RP8L2_ARATH (Q9MAG6) Probable disease resistance RPP8-like protein 2|
          Length = 1271

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 13/63 (20%), Positives = 35/63 (55%)
 Frame = +3

Query: 102 AQEYALIRGVRGDIQYINDELCSMQAFLTNLGTGDEEHDAQIQDWAKQIRDIAYDIEDCV 281
           ++E A + G+   +  +  +L  +Q+ L +      E + +++++ + ++DI YD +D +
Sbjct: 18  SRESARLNGIDEQVDGLKRQLGRLQSLLKDADAKKNETE-RVRNFLEDVKDIVYDADDII 76

Query: 282 DDF 290
           + F
Sbjct: 77  ESF 79

>YBOX2_MOUSE (Q9Z2C8) Y-box-binding protein 2 (Germ cell-specific Y-box-binding|
           protein) (FRGY2 homolog)
          Length = 360

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = +2

Query: 92  QPPSPGVRSDPWRPRRHPVHQRRALQHAG 178
           Q P+ G R +P RPR  P  QRR  Q  G
Sbjct: 308 QGPTDGSRPEPQRPRNRPYFQRRRQQPPG 336

>YBOX2_HUMAN (Q9Y2T7) Y-box-binding protein 2 (Germ cell-specific Y-box-binding|
           protein) (Contrin) (MSY2 homolog)
          Length = 364

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = +2

Query: 92  QPPSPGVRSDPWRPRRHPVHQRRALQHAG 178
           Q P+ G R +P RPR  P  QRR  Q  G
Sbjct: 306 QGPADGSRPEPQRPRNRPYFQRRRQQAPG 334

>NHA2_RHORH (P29378) Low-molecular weight cobalt-containing nitrile hydratase|
           subunit alpha (EC 4.2.1.84) (L-nitrilase) (L-NHase)
          Length = 206

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -3

Query: 163 SSSLMYWMSPRTPRIRAYSWARRLPSLLTRDFTVDCEAPTTRS 35
           S+ L YW+ P+ P         +L  L+TRD  +    PTT S
Sbjct: 162 SAELRYWVLPQRPAGTENFTEEQLADLVTRDSLIGVSVPTTPS 204

>RGA1_SOLBU (Q7XA42) Putative disease resistance protein RGA1 (RGA3-blb)|
          Length = 1025

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 12/61 (19%), Positives = 34/61 (55%)
 Frame = +3

Query: 108 EYALIRGVRGDIQYINDELCSMQAFLTNLGTGDEEHDAQIQDWAKQIRDIAYDIEDCVDD 287
           E  L+ G + + Q ++    ++QA L +     + +D  +++W +++    Y+++D +D+
Sbjct: 20  ELVLLFGFQDEFQRLSSMFSTIQAVLED-AQEKQLNDKPLENWLQKLNAATYEVDDILDE 78

Query: 288 F 290
           +
Sbjct: 79  Y 79

>R13L1_ARATH (Q9LRR4) Putative disease resistance RPP13-like protein 1|
          Length = 1054

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +3

Query: 225 IQDWAKQIRDIAYDIEDCVDDFA 293
           ++ W  ++RD+ Y  ED +DD A
Sbjct: 66  VEKWVNELRDVVYHAEDALDDIA 88

>CDT1_MOUSE (Q8R4E9) DNA replication factor Cdt1 (Double parked homolog) (DUP)|
           (Retroviral insertion site 2 protein)
          Length = 557

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = -1

Query: 114 RTPGLGGCPACSPETSRWIAKLPPPDP 34
           R PGL  CP+  PE S      PP DP
Sbjct: 68  RLPGLDSCPSSLPEPSSPAEPSPPADP 94

>RIN3_HUMAN (Q8TB24) Ras and Rab interactor 3 (Ras interaction/interference|
           protein 3)
          Length = 984

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 8/33 (24%)
 Frame = -1

Query: 108 PGLGGCPA--------CSPETSRWIAKLPPPDP 34
           P LG CPA         +  TSRW  + PPP P
Sbjct: 252 PPLGNCPARPLPPTSDATSPTSRWAPRRPPPPP 284

>EDN1_ATEAB (Q5NRP9) Endothelin-1 precursor (ET-1) (Preproendothelin-1) (PPET1)|
          Length = 202

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 13/20 (65%), Positives = 14/20 (70%)
 Frame = +2

Query: 80  EQAGQPPSPGVRSDPWRPRR 139
           EQ G+ PSP   S PWRPRR
Sbjct: 33  EQGGEQPSP---SPPWRPRR 49

>YP01_MOUSE (Q8BQM4) Protein C030036P15Rik|
          Length = 679

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = +3

Query: 144 QYINDELCSMQAFLTNLGTGDEEHDAQIQDWAKQIRDIAYDIEDC 278
           Q+   E C  +A   + GTGDEE D    +  ++++  + ++ +C
Sbjct: 13  QFSPIESCQAEAAAASNGTGDEEDDGPAAELLEKLQHPSAEVREC 57

>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5|
          Length = 388

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -1

Query: 108 PGLGGCPACSPETSRWIAKLPPPDP 34
           PG+GG P   P   R+   +PPP P
Sbjct: 328 PGMGGMPPPPPPGMRYPGGMPPPPP 352

>RGA3_SOLBU (Q7XA40) Putative disease resistance protein RGA3 (RGA1-blb)|
           (Blight resistance protein B149)
          Length = 947

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 14/60 (23%), Positives = 32/60 (53%)
 Frame = +3

Query: 108 EYALIRGVRGDIQYINDELCSMQAFLTNLGTGDEEHDAQIQDWAKQIRDIAYDIEDCVDD 287
           E  L+ G   + + ++     +QA L +      ++ A I++W +++   AY+++D +DD
Sbjct: 20  ELGLVFGFEKEFKKLSSMFSMIQAVLEDAQEKQLKYKA-IKNWLQKLNVAAYEVDDILDD 78

>SRMB_ECOLI (P21507) ATP-dependent RNA helicase srmB (EC 3.6.1.-)|
          Length = 444

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +3

Query: 204 DEEHDAQIQDWAKQIRDIAYDIE-DCVDDFAHRLPDDP 314
           D EH A    W KQ    +  +E D + DFA RL +DP
Sbjct: 170 DIEHIAGETRWRKQTLLFSATLEGDAIQDFAERLLEDP 207

>TOLB_BRAJA (Q89ED5) Protein tolB precursor|
          Length = 454

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
 Frame = +2

Query: 11  GRVVKL--ENGSGGGSFAIHREVSGEQAGQPPSPGVRSDP-WRP 133
           GRV+    + G  GG      ++SG    + P+PG  SDP W P
Sbjct: 403 GRVLMFFRDPGGSGGPSLYSVDISGRNELKVPTPGFASDPAWSP 446

>RGA2_SOLBU (Q7XBQ9) Disease resistance protein RGA2 (RGA2-blb) (Blight|
           resistance protein RPI)
          Length = 970

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 11/61 (18%), Positives = 34/61 (55%)
 Frame = +3

Query: 108 EYALIRGVRGDIQYINDELCSMQAFLTNLGTGDEEHDAQIQDWAKQIRDIAYDIEDCVDD 287
           E  L+ G + + Q ++    ++QA L +     + ++  +++W +++    Y+++D +D+
Sbjct: 20  ELVLLFGFQDEFQRLSSMFSTIQAVLED-AQEKQLNNKPLENWLQKLNAATYEVDDILDE 78

Query: 288 F 290
           +
Sbjct: 79  Y 79

>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)|
          Length = 2716

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 12/31 (38%), Positives = 13/31 (41%)
 Frame = -1

Query: 126 HGSERTPGLGGCPACSPETSRWIAKLPPPDP 34
           HG    P  GG P  +P        LPPP P
Sbjct: 115 HGGPAPPPPGGAPEHAPGVKEEYTHLPPPHP 145

>ATX5_ARATH (Q8GZ42) Histone-lysine N-methyltransferase ATX5 (EC 2.1.1.43)|
           (Trithorax-homolog protein 5) (TRX-homolog protein 5)
           (Protein SET DOMAIN GROUP 29)
          Length = 1043

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -3

Query: 196 PRLVRKACMLQSSSLMYWMSPRTPRIRAYSWARR 95
           P LV ++C+  ++ +M++    T   R Y+W RR
Sbjct: 250 PELVLRSCIPDAACVMFFGHSGTENERDYAWVRR 283

>SYS_VIBF1 (Q5E6E3) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 435

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +3

Query: 153 NDELCSMQAFLTNLGTGDEEHDAQIQDWAKQIRDIAYDIEDCVDD 287
           ++E   + A + NLG+  +E  A + +  +QI DIA  + +  DD
Sbjct: 67  HEEADRIMADVANLGSELDEAKAALAELQQQIEDIALSVPNIPDD 111

>SEN2_NEUCR (Q9P6Y2) Probable tRNA-splicing endonuclease subunit sen-2 (EC|
           3.1.27.9) (tRNA-intron endonuclease sen-2)
          Length = 633

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +2

Query: 74  SGEQAGQPPSPGVRSDPWRPRRHPVHQ 154
           SGE+A    +P   S P RP R P HQ
Sbjct: 20  SGEEAPASTNPAATSAPPRPPRVPYHQ 46

>TMC6_MOUSE (Q7TN60) Transmembrane channel-like protein 6|
          Length = 810

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -1

Query: 123 GSERTPGLGGCPACSPETSRWIAKLP 46
           G +  PGL G PA S  T R +A +P
Sbjct: 60  GDQTLPGLEGAPALSSATLRILASMP 85

>CBP_MOUSE (P45481) CREB-binding protein (EC 2.3.1.48)|
          Length = 2441

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
 Frame = +2

Query: 83   QAGQPPSPGVRSDPWRPRRHPVHQRRALQH-----AGLP 184
            Q G  P PG++S P    +  +HQ+ +LQ+     AG+P
Sbjct: 2113 QPGMQPQPGLQSQPGMQPQPGMHQQPSLQNLNAMQAGVP 2151

>LARP1_HUMAN (Q6PKG0) La-related protein 1 (La ribonucleoprotein domain family|
           member 1)
          Length = 1096

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = -3

Query: 139 SPRTPRIRAYSWARRLPSLLTRDFTVDCEAPTTRSIFEFDDPPRE 5
           +PRTP+++  S   R   ++    T+D + P  R      +PP E
Sbjct: 785 TPRTPQLKDSSQTSRFYPVVKEGRTLDAKMPRKRKTRHSSNPPLE 829

>CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)|
          Length = 2442

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
 Frame = +2

Query: 83   QAGQPPSPGVRSDPWRPRRHPVHQRRALQH-----AGLP 184
            Q G  P PG++S P    +  +HQ+ +LQ+     AG+P
Sbjct: 2112 QPGMQPQPGLQSQPGMQPQPGMHQQPSLQNLNAMQAGVP 2150

>COIA1_HUMAN (P39060) Collagen alpha-1(XVIII) chain precursor [Contains:|
           Endostatin]
          Length = 1516

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +2

Query: 35  GSGGGSFAIHREVSGEQAGQPPSPGVRSDPWRP 133
           GSGG  ++  R   G Q G P  PG++ DP  P
Sbjct: 796 GSGGPFWSTARSADGPQ-GPPGLPGLKGDPGVP 827

>YRU4_CAEEL (Q09350) Hypothetical protein T09B9.4|
          Length = 528

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 32  NGSGGGSFAIHREVSGEQAGQPPSPG 109
           +G G  SF++HR  SG      PSPG
Sbjct: 19  SGRGESSFSVHRSHSGGHEPFAPSPG 44


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,853,571
Number of Sequences: 219361
Number of extensions: 758346
Number of successful extensions: 3294
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 3163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3292
length of database: 80,573,946
effective HSP length: 111
effective length of database: 56,224,875
effective search space used: 1349397000
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)