ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl45f12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-assoc... 31 1.1
2BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-assoc... 31 1.1

>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2157

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 19/41 (46%), Positives = 22/41 (53%)
 Frame = +1

Query: 7    LCPPFLLAPPSQTPSKTLAAGAPFRVQTREALGVRRGRGEG 129
            L PP   APPS  P++  A G   RV T   +  RRGRG G
Sbjct: 1137 LAPPPPGAPPSPAPARFTARGG--RVFTPRGVPSRRGRGGG 1175



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>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2160

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 19/41 (46%), Positives = 22/41 (53%)
 Frame = +1

Query: 7    LCPPFLLAPPSQTPSKTLAAGAPFRVQTREALGVRRGRGEG 129
            L PP   APPS  P++  A G   RV T   +  RRGRG G
Sbjct: 1140 LAPPPPGAPPSPAPARFTARGG--RVFTPRGVPSRRGRGGG 1178


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,087,874
Number of Sequences: 219361
Number of extensions: 128674
Number of successful extensions: 593
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 80,573,946
effective HSP length: 21
effective length of database: 75,967,365
effective search space used: 1823216760
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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