ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl45f10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_477047.1| Oryza sativa (japonica cultivar-group), mRNA 200 2e-48
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 127 3e-26
3dbj|AP005171.3| Oryza sativa (japonica cultivar-group) genomic D... 127 3e-26
4dbj|AP004273.2| Oryza sativa (japonica cultivar-group) genomic D... 127 3e-26
5gb|AC113291.16| Mus musculus chromosome 9, clone RP23-417K23, co... 42 1.3
6ref|XM_949043.1| Theileria annulata strain Ankara hypothetical p... 42 1.3
7gb|AC121813.3| Mus musculus BAC clone RP23-457E5 from 9, complet... 42 1.3
8gb|AC159470.17| Mus musculus 10 BAC RP24-462C5 (Roswell Park Can... 42 1.3
9gb|AC167231.12| Mus musculus BAC RP23-416P12 (Roswell Park Canc... 42 1.3
10gb|AC108429.11| Mus musculus chromosome 7, clone RP23-161B5, com... 40 5.3
11gb|AC129981.9| Mus musculus chromosome 5, clone RP23-114I13, com... 40 5.3
12ref|NM_117976.3| Arabidopsis thaliana wave5 AT4G18600 (wave5) mR... 40 5.3
13gb|AY743923.1| Arabidopsis thaliana SCAR-like domain-containing ... 40 5.3
14gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 40 5.3
15gb|AC133950.4| Mus musculus BAC clone RP24-243C16 from chromosom... 40 5.3
16gb|AC140210.2| Mus musculus BAC clone RP24-472L9 from chromosome... 40 5.3
17emb|BX324199.7| Zebrafish DNA sequence from clone DKEYP-7D4 in l... 40 5.3
18gb|AC087237.14| Homo sapiens 12p BAC RP11-405A12 (Roswell Park C... 40 5.3
19emb|AL161549.2|ATCHRIV49 Arabidopsis thaliana DNA chromosome 4, ... 40 5.3
20emb|AL035526.1|ATF28A21 Arabidopsis thaliana DNA chromosome 4, B... 40 5.3
21emb|AL021710.1|ATF28J12 Arabidopsis thaliana DNA chromosome 4, B... 40 5.3
22gb|AC097533.2| Homo sapiens BAC clone RP11-770K15 from 4, comple... 40 5.3
23gb|DQ174205.1| Campylobacter lari strain NZ3663-96 RpoB (rpoB) g... 40 5.3
24gb|DQ174204.1| Campylobacter lari strain NZ3541-96 RpoB (rpoB) g... 40 5.3
25dbj|AB213664.1| Glycine max gene for hypothetical protein, parti... 40 5.3
26emb|AL805945.5| Zebrafish DNA sequence from clone CH211-195M7, c... 40 5.3
27gb|AC154822.2| Mus musculus BAC clone RP24-537L18 from 13, compl... 40 5.3
28emb|AL606918.9| Mouse DNA sequence from clone RP23-327O13 on chr... 40 5.3 
>ref|XM_477047.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 5025

 Score =  200 bits (101), Expect = 2e-48
 Identities = 236/281 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1    tgttagcagatctgaacttggactagagccaggtaccaaagctgaaagtgtttatcatgt 60
            ||||||||||||||| |||||| |||||||||||||  ||||||||| |||||| || ||
Sbjct: 1221 tgttagcagatctgagcttggattagagccaggtactgaagctgaaaatgtttaccacgt 1280

                                                                        
Query: 61   tggacaagttgtcaaatgtagaattgtaagcgttgtccccacttcaaggaaactatatgt 120
            ||| ||||| |||||||| ||| |||| || || |||||  ||||||||||| || ||||
Sbjct: 1281 tggtcaagtggtcaaatgcagagttgtgagtgtagtccctgcttcaaggaaaataaatgt 1340

                                                                        
Query: 121  tagttttacaatgtcttctcatagggtcagtcaagctgatactgcaaaggtgggcaccat 180
            || ||||   || ||| |  ||||||| | ||||||||| ||  |||||||||| |  ||
Sbjct: 1341 tacttttctgatatctacaaatagggttattcaagctgacaccccaaaggtgggaagtat 1400

                                                                        
Query: 181  tgtctctggtgttgttgaacgacttactcctgcaactgttgttgtcagtgtcaatggctt 240
            ||| ||||||||||| || ||||||||||||||| | |||||||||||||| ||||||||
Sbjct: 1401 tgtatctggtgttgtggagcgacttactcctgcagcagttgttgtcagtgtaaatggctt 1460

                                                     
Query: 241  ctccaagggatctatacttaatgaacagctggcagatcatc 281
            || ||||||||| |||||||||||||| || ||||| ||||
Sbjct: 1461 ctgcaagggatcaatacttaatgaacatctagcagaccatc 1501



 Score = 46.1 bits (23), Expect = 0.086
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                   
Query: 355  tgaaggccaaaatttagttctttccgctaagcactcact 393
            |||||| ||||||||||||||||| || ||||| |||||
Sbjct: 1509 tgaagggcaaaatttagttctttcagccaagcaatcact 1547
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  127 bits (64), Expect = 3e-26
 Identities = 121/140 (86%)
 Strand = Plus / Plus

                                                                           
Query: 142     tagggtcagtcaagctgatactgcaaaggtgggcaccattgtctctggtgttgttgaacg 201
               |||||| | ||||||||| ||  |||||||||| |  ||||| ||||||||||| || ||
Sbjct: 5579026 tagggttattcaagctgacaccccaaaggtgggaagtattgtatctggtgttgtggagcg 5579085

                                                                           
Query: 202     acttactcctgcaactgttgttgtcagtgtcaatggcttctccaagggatctatacttaa 261
               ||||||||||||| | |||||||||||||| |||||||||| ||||||||| ||||||||
Sbjct: 5579086 acttactcctgcagcagttgttgtcagtgtaaatggcttctgcaagggatcaatacttaa 5579145

                                   
Query: 262     tgaacagctggcagatcatc 281
               |||||| || ||||| ||||
Sbjct: 5579146 tgaacatctagcagaccatc 5579165



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 101/120 (84%)
 Strand = Plus / Plus

                                                                           
Query: 8       agatctgaacttggactagagccaggtaccaaagctgaaagtgtttatcatgttggacaa 67
               |||||||| |||||| |||||||||||||  ||||||||| |||||| || ||||| |||
Sbjct: 5577717 agatctgagcttggattagagccaggtactgaagctgaaaatgtttaccacgttggtcaa 5577776

                                                                           
Query: 68      gttgtcaaatgtagaattgtaagcgttgtccccacttcaaggaaactatatgttagtttt 127
               || |||||||| ||| |||| || || |||||  ||||||||||| || |||||| ||||
Sbjct: 5577777 gtggtcaaatgcagagttgtgagtgtagtccctgcttcaaggaaaataaatgttactttt 5577836



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                           
Query: 287     caagctgctcagttgaagaatttgttgaagcctggccatgagttcaaccagcttttagtt 346
               |||||||||||  ||||||||||||||||||||||||||||||||| | |||| ||||||
Sbjct: 5579336 caagctgctcaactgaagaatttgttgaagcctggccatgagttcagcgagctcttagtt 5579395

                 
Query: 347     ct 348
               ||
Sbjct: 5579396 ct 5579397



 Score = 46.1 bits (23), Expect = 0.086
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                      
Query: 355     tgaaggccaaaatttagttctttccgctaagcactcact 393
               |||||| ||||||||||||||||| || ||||| |||||
Sbjct: 5579736 tgaagggcaaaatttagttctttcagccaagcaatcact 5579774
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>dbj|AP005171.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0081K20
          Length = 117287

 Score =  127 bits (64), Expect = 3e-26
 Identities = 121/140 (86%)
 Strand = Plus / Plus

                                                                         
Query: 142   tagggtcagtcaagctgatactgcaaaggtgggcaccattgtctctggtgttgttgaacg 201
             |||||| | ||||||||| ||  |||||||||| |  ||||| ||||||||||| || ||
Sbjct: 92111 tagggttattcaagctgacaccccaaaggtgggaagtattgtatctggtgttgtggagcg 92170

                                                                         
Query: 202   acttactcctgcaactgttgttgtcagtgtcaatggcttctccaagggatctatacttaa 261
             ||||||||||||| | |||||||||||||| |||||||||| ||||||||| ||||||||
Sbjct: 92171 acttactcctgcagcagttgttgtcagtgtaaatggcttctgcaagggatcaatacttaa 92230

                                 
Query: 262   tgaacagctggcagatcatc 281
             |||||| || ||||| ||||
Sbjct: 92231 tgaacatctagcagaccatc 92250



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 101/120 (84%)
 Strand = Plus / Plus

                                                                         
Query: 8     agatctgaacttggactagagccaggtaccaaagctgaaagtgtttatcatgttggacaa 67
             |||||||| |||||| |||||||||||||  ||||||||| |||||| || ||||| |||
Sbjct: 90802 agatctgagcttggattagagccaggtactgaagctgaaaatgtttaccacgttggtcaa 90861

                                                                         
Query: 68    gttgtcaaatgtagaattgtaagcgttgtccccacttcaaggaaactatatgttagtttt 127
             || |||||||| ||| |||| || || |||||  ||||||||||| || |||||| ||||
Sbjct: 90862 gtggtcaaatgcagagttgtgagtgtagtccctgcttcaaggaaaataaatgttactttt 90921



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                         
Query: 287   caagctgctcagttgaagaatttgttgaagcctggccatgagttcaaccagcttttagtt 346
             |||||||||||  ||||||||||||||||||||||||||||||||| | |||| ||||||
Sbjct: 92421 caagctgctcaactgaagaatttgttgaagcctggccatgagttcagcgagctcttagtt 92480

               
Query: 347   ct 348
             ||
Sbjct: 92481 ct 92482



 Score = 46.1 bits (23), Expect = 0.086
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                    
Query: 355   tgaaggccaaaatttagttctttccgctaagcactcact 393
             |||||| ||||||||||||||||| || ||||| |||||
Sbjct: 92821 tgaagggcaaaatttagttctttcagccaagcaatcact 92859
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>dbj|AP004273.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0431A02
          Length = 165038

 Score =  127 bits (64), Expect = 3e-26
 Identities = 121/140 (86%)
 Strand = Plus / Plus

                                                                         
Query: 142   tagggtcagtcaagctgatactgcaaaggtgggcaccattgtctctggtgttgttgaacg 201
             |||||| | ||||||||| ||  |||||||||| |  ||||| ||||||||||| || ||
Sbjct: 40718 tagggttattcaagctgacaccccaaaggtgggaagtattgtatctggtgttgtggagcg 40777

                                                                         
Query: 202   acttactcctgcaactgttgttgtcagtgtcaatggcttctccaagggatctatacttaa 261
             ||||||||||||| | |||||||||||||| |||||||||| ||||||||| ||||||||
Sbjct: 40778 acttactcctgcagcagttgttgtcagtgtaaatggcttctgcaagggatcaatacttaa 40837

                                 
Query: 262   tgaacagctggcagatcatc 281
             |||||| || ||||| ||||
Sbjct: 40838 tgaacatctagcagaccatc 40857



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 101/120 (84%)
 Strand = Plus / Plus

                                                                         
Query: 8     agatctgaacttggactagagccaggtaccaaagctgaaagtgtttatcatgttggacaa 67
             |||||||| |||||| |||||||||||||  ||||||||| |||||| || ||||| |||
Sbjct: 39409 agatctgagcttggattagagccaggtactgaagctgaaaatgtttaccacgttggtcaa 39468

                                                                         
Query: 68    gttgtcaaatgtagaattgtaagcgttgtccccacttcaaggaaactatatgttagtttt 127
             || |||||||| ||| |||| || || |||||  ||||||||||| || |||||| ||||
Sbjct: 39469 gtggtcaaatgcagagttgtgagtgtagtccctgcttcaaggaaaataaatgttactttt 39528



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                         
Query: 287   caagctgctcagttgaagaatttgttgaagcctggccatgagttcaaccagcttttagtt 346
             |||||||||||  ||||||||||||||||||||||||||||||||| | |||| ||||||
Sbjct: 41028 caagctgctcaactgaagaatttgttgaagcctggccatgagttcagcgagctcttagtt 41087

               
Query: 347   ct 348
             ||
Sbjct: 41088 ct 41089



 Score = 46.1 bits (23), Expect = 0.086
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                    
Query: 355   tgaaggccaaaatttagttctttccgctaagcactcact 393
             |||||| ||||||||||||||||| || ||||| |||||
Sbjct: 41428 tgaagggcaaaatttagttctttcagccaagcaatcact 41466
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>gb|AC113291.16| Mus musculus chromosome 9, clone RP23-417K23, complete sequence
          Length = 200428

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 14     gaacttggactagagccaggt 34
              |||||||||||||||||||||
Sbjct: 194451 gaacttggactagagccaggt 194471
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>ref|XM_949043.1| Theileria annulata strain Ankara hypothetical protein (TA02975)
           partial mRNA
          Length = 1248

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 65  caagttgtcaaatgtagaatt 85
           |||||||||||||||||||||
Sbjct: 489 caagttgtcaaatgtagaatt 469
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>gb|AC121813.3| Mus musculus BAC clone RP23-457E5 from 9, complete sequence
          Length = 178176

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 14     gaacttggactagagccaggt 34
              |||||||||||||||||||||
Sbjct: 119547 gaacttggactagagccaggt 119527
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>gb|AC159470.17| Mus musculus 10 BAC RP24-462C5 (Roswell Park Cancer Institute
           (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 175513

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 25  agagccaggtaccaaagctga 45
           |||||||||||||||||||||
Sbjct: 551 agagccaggtaccaaagctga 571
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>gb|AC167231.12| Mus musculus  BAC RP23-416P12 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 205781

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 25    agagccaggtaccaaagctga 45
             |||||||||||||||||||||
Sbjct: 86180 agagccaggtaccaaagctga 86200
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>gb|AC108429.11| Mus musculus chromosome 7, clone RP23-161B5, complete sequence
          Length = 186903

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    gctgaaagtgtttatcatgt 60
             ||||||||||||||||||||
Sbjct: 31791 gctgaaagtgtttatcatgt 31772
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>gb|AC129981.9| Mus musculus chromosome 5, clone RP23-114I13, complete sequence
          Length = 198469

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 273    cagatcatcatggccaagctgctcagtt 300
              ||||||| ||||||||||||||| ||||
Sbjct: 132689 cagatcaacatggccaagctgctgagtt 132662
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>ref|NM_117976.3| Arabidopsis thaliana wave5 AT4G18600 (wave5) mRNA, complete cds
          Length = 6153

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 294  ctcagttgaagaatttgttg 313
            ||||||||||||||||||||
Sbjct: 3051 ctcagttgaagaatttgttg 3070
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>gb|AY743923.1| Arabidopsis thaliana SCAR-like domain-containing protein (At4g18600)
            mRNA, complete cds
          Length = 6087

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 294  ctcagttgaagaatttgttg 313
            ||||||||||||||||||||
Sbjct: 3051 ctcagttgaagaatttgttg 3070
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>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 289     agctgctcagttgaagaatttgtt 312
               ||||||| ||||||||||||||||
Sbjct: 3066971 agctgcttagttgaagaatttgtt 3066948
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>gb|AC133950.4| Mus musculus BAC clone RP24-243C16 from chromosome 7, complete sequence
          Length = 176244

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     gctgaaagtgtttatcatgt 60
              ||||||||||||||||||||
Sbjct: 148396 gctgaaagtgtttatcatgt 148377
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>gb|AC140210.2| Mus musculus BAC clone RP24-472L9 from chromosome 13, complete sequence
          Length = 147418

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 297   agttgaagaatttgttgaag 316
             ||||||||||||||||||||
Sbjct: 41321 agttgaagaatttgttgaag 41340
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>emb|BX324199.7| Zebrafish DNA sequence from clone DKEYP-7D4 in linkage group 17,
             complete sequence
          Length = 69782

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   ctatatgttagttttacaat 132
             ||||||||||||||||||||
Sbjct: 53440 ctatatgttagttttacaat 53459
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>gb|AC087237.14| Homo sapiens 12p BAC RP11-405A12 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 166380

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 302   aagaatttgttgaagcctgg 321
             ||||||||||||||||||||
Sbjct: 43273 aagaatttgttgaagcctgg 43292
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>emb|AL161549.2|ATCHRIV49 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 49
          Length = 199075

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 294   ctcagttgaagaatttgttg 313
             ||||||||||||||||||||
Sbjct: 21215 ctcagttgaagaatttgttg 21196
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>emb|AL035526.1|ATF28A21 Arabidopsis thaliana DNA chromosome 4, BAC clone F28A21 (ESSA
            project)
          Length = 94301

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 294  ctcagttgaagaatttgttg 313
            ||||||||||||||||||||
Sbjct: 1935 ctcagttgaagaatttgttg 1916
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>emb|AL021710.1|ATF28J12 Arabidopsis thaliana DNA chromosome 4, BAC clone F28J12 (ESSAII project)
          Length = 110102

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 294    ctcagttgaagaatttgttg 313
              ||||||||||||||||||||
Sbjct: 102393 ctcagttgaagaatttgttg 102374
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>gb|AC097533.2| Homo sapiens BAC clone RP11-770K15 from 4, complete sequence
          Length = 174696

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 38     aaagctgaaagtgtttatca 57
              ||||||||||||||||||||
Sbjct: 132464 aaagctgaaagtgtttatca 132483
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>gb|DQ174205.1| Campylobacter lari strain NZ3663-96 RpoB (rpoB) gene, partial cds
          Length = 487

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 298 gttgaagaatttgttgaagc 317
           ||||||||||||||||||||
Sbjct: 335 gttgaagaatttgttgaagc 354
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>gb|DQ174204.1| Campylobacter lari strain NZ3541-96 RpoB (rpoB) gene, partial cds
          Length = 487

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 298 gttgaagaatttgttgaagc 317
           ||||||||||||||||||||
Sbjct: 335 gttgaagaatttgttgaagc 354
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>dbj|AB213664.1| Glycine max gene for hypothetical protein, partial cds, clone: AFLP
           Eact/Mctt-157
          Length = 157

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 47  agtgtttatcatgttggacaagtt 70
           ||||||||||||| ||||||||||
Sbjct: 132 agtgtttatcatgctggacaagtt 155
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>emb|AL805945.5| Zebrafish DNA sequence from clone CH211-195M7, complete sequence
          Length = 212604

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 113    ctatatgttagttttacaat 132
              ||||||||||||||||||||
Sbjct: 182382 ctatatgttagttttacaat 182363
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>gb|AC154822.2| Mus musculus BAC clone RP24-537L18 from 13, complete sequence
          Length = 167628

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 297    agttgaagaatttgttgaag 316
              ||||||||||||||||||||
Sbjct: 133595 agttgaagaatttgttgaag 133614
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>emb|AL606918.9| Mouse DNA sequence from clone RP23-327O13 on chromosome 4, complete
             sequence
          Length = 192787

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 220   tgttgtcagtgtcaatggct 239
             ||||||||||||||||||||
Sbjct: 63939 tgttgtcagtgtcaatggct 63920


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,855,819
Number of Sequences: 3902068
Number of extensions: 3855819
Number of successful extensions: 90558
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90437
Number of HSP's gapped (non-prelim): 120
length of query: 398
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 376
effective length of database: 17,147,199,772
effective search space: 6447347114272
effective search space used: 6447347114272
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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