Clone Information

BLAST Search Result

Clone Name	bastl45f09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	HOX1A_MAIZE (P46605) Homeobox protein HOX1A	42	0.001
2	H12_HUMAN (P16403) Histone H1.2 (Histone H1d)	35	0.093
3	MSH6_YEAST (Q03834) MutS protein homolog 6	34	0.16
4	NFH_HUMAN (P12036) Neurofilament triplet H protein (200 kDa neur...	34	0.21
5	H14_MOUSE (P43274) Histone H1.4 (H1 VAR.2) (H1e)	33	0.27
6	H13_MOUSE (P43277) Histone H1.3 (H1 VAR.4) (H1d)	33	0.27
7	H12_MOUSE (P15864) Histone H1.2 (H1 VAR.1) (H1c)	33	0.36
8	MLH_TETTH (P40631) Micronuclear linker histone polyprotein (MIC ...	33	0.36
9	MARCS_CHICK (P16527) Myristoylated alanine-rich C-kinase substra...	33	0.36
10	H1_SALTR (P02254) Histone H1	33	0.36
11	H14_HUMAN (P10412) Histone H1.4 (Histone H1b)	33	0.46
12	H12_RAT (P15865) Histone H1.2 (H1d)	33	0.46
13	YJY1_SCHPO (Q9USN8) Hypothetical protein C132.01c in chromosome III	32	0.61
14	YR871_MIMIV (Q5UP41) Hypothetical protein R871	32	0.61
15	SCW11_YEAST (P53189) Probable family 17 glucosidase SCW11 precur...	32	0.61
16	VE2_HPV38 (Q80910) Regulatory protein E2	32	0.61
17	VAC7_YEAST (P53950) Vacuolar segregation protein 7	32	0.61
18	CCNL2_MOUSE (Q9JJA7) Cyclin-L2 (Cyclin Ania-6b) (Paneth cell-enh...	32	0.79
19	SFRS4_MOUSE (Q8VE97) Splicing factor, arginine/serine-rich 4	32	0.79
20	IF2_BARQU (Q6G0P2) Translation initiation factor IF-2	32	0.79
21	REF2_YEAST (P42073) RNA end formation protein 2	32	1.0
22	VRK3_HUMAN (Q8IV63) Serine/threonine-protein kinase VRK3 (EC 2.7...	32	1.0
23	SON_HUMAN (P18583) SON protein (SON3) (Negative regulatory eleme...	32	1.0
24	KIN4_YEAST (Q01919) Serine/threonine-protein kinase KIN4 (EC 2.7...	32	1.0
25	H1L_MYTTR (Q05831) Sperm-specific protein PHI-2B (PL-II*) (Sperm...	32	1.0
26	H13_RABIT (P02251) Histone H1.3	31	1.3
27	VE2_HPV47 (P22420) Regulatory protein E2	31	1.3
28	SFRS7_HUMAN (Q16629) Splicing factor, arginine/serine-rich 7 (Sp...	31	1.3
29	H12_DROVI (Q94555) Histone H1.2	31	1.3
30	YBL7_YEAST (P38213) Protein YBR007C	31	1.3
31	RED2_HUMAN (Q9NS39) Double-stranded RNA-specific editase B2 (EC ...	31	1.3
32	CSPG2_CHICK (Q90953) Versican core protein precursor (Large fibr...	31	1.8
33	TWST2_RAT (P97831) Twist-related protein 2	31	1.8
34	TWST2_MOUSE (Q9D030) Twist-related protein 2 (Dermis expressed p...	31	1.8
35	TWST2_HUMAN (Q8WVJ9) Twist-related protein 2 (Dermis expressed p...	31	1.8
36	H11_DROVI (Q24704) Histone H1.1	31	1.8
37	EAF7_KLULA (Q6CX31) Chromatin modification-related protein EAF7	31	1.8
38	RSP1_CAEEL (Q23121) Probable splicing factor, arginine/serine-ri...	30	2.3
39	SFRS8_HUMAN (Q12872) Splicing factor, arginine/serine-rich 8 (Su...	30	2.3
40	EFTU1_SOYBN (Q43467) Elongation factor Tu, chloroplast precursor...	30	2.3
41	ATU_DROME (Q94546) Another transcription unit protein	30	2.3
42	H15_HUMAN (P16401) Histone H1.5 (Histone H1a)	30	2.3
43	CJ012_HUMAN (Q8N655) Protein C10orf12	30	2.3
44	CWC27_USTMA (Q4P7H2) Peptidyl-prolyl isomerase CWC27 (EC 5.2.1.8)	30	3.0
45	SWR1_YARLI (Q6CA87) Helicase SWR1 (EC 3.6.1.-)	30	3.0
46	VE2_HPV09 (P36780) Regulatory protein E2	30	3.0
47	ATL_STAAW (Q8NX96) Bifunctional autolysin precursor [Includes: N...	30	3.0
48	ATL_STAAU (P52081) Bifunctional autolysin precursor [Includes: N...	30	3.0
49	ATL_STAAC (Q5HH31) Bifunctional autolysin precursor [Includes: N...	30	3.0
50	PI5PA_RAT (Q9JMC1) Phosphatidylinositol 4,5-bisphosphate 5-phosp...	30	3.0
51	ATL_STAAS (Q6GAG0) Bifunctional autolysin precursor [Includes: N...	30	3.0
52	MAST3_HUMAN (O60307) Microtubule-associated serine/threonine-pro...	30	3.0
53	JHD1B_MOUSE (Q6P1G2) JmjC domain-containing histone demethylatio...	30	3.0
54	UNC89_CAEEL (O01761) Muscle M-line assembly protein unc-89 (Unco...	30	3.0
55	YOJ4_CAEEL (P34627) Hypothetical protein ZK353.4	30	3.9
56	NU124_SCHPO (Q09904) Nucleoporin nup124 (Nuclear pore protein nu...	30	3.9
57	DACH1_MOUSE (Q9QYB2) Dachshund homolog 1 (Dach1)	30	3.9
58	ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog (EC 3...	30	3.9
59	VE2_HPV5B (P26545) Regulatory protein E2	30	3.9
60	ICP0_EHV1V (P84445) Trans-acting transcriptional protein ICP0 (I...	29	5.1
61	ICP0_EHV1B (P28990) Trans-acting transcriptional protein ICP0	29	5.1
62	H15_MOUSE (P43276) Histone H1.5 (H1 VAR.5) (H1b)	29	5.1
63	GYRA_RICPR (P41080) DNA gyrase subunit A (EC 5.99.1.3)	29	5.1
64	PININ_MOUSE (O35691) Pinin	29	5.1
65	H5_CHICK (P02259) Histone H5	29	5.1
66	EAF7_CANAL (Q5A6Q7) Chromatin modification-related protein EAF7	29	5.1
67	NIM1_NEUCR (P48479) G2-specific protein kinase nim-1 (EC 2.7.11.1)	29	6.7
68	H101_CHICK (P08284) Histone H1.01	29	6.7
69	FMT_ENTFA (Q82ZD8) Methionyl-tRNA formyltransferase (EC 2.1.2.9)	29	6.7
70	KC13_YEAST (P39962) Casein kinase I homolog 3 (EC 2.7.11.1)	29	6.7
71	FUSIP_MOUSE (Q9R0U0) FUS-interacting serine-arginine-rich protei...	29	6.7
72	FUSIP_HUMAN (O75494) FUS-interacting serine-arginine-rich protei...	29	6.7
73	IE63_MCMVS (Q69154) Transcriptional regulator IE63 homolog (Prot...	29	6.7
74	PRP4B_MOUSE (Q61136) Serine/threonine-protein kinase PRP4 homolo...	29	6.7
75	DSBB_HAEDU (Q7VKY2) Disulfide bond formation protein B (Disulfid...	29	6.7
76	SON_MOUSE (Q9QX47) SON protein	28	8.7
77	TOP1_ARATH (P30181) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoi...	28	8.7
78	TTKA_DROME (P42282) Protein tramtrack, alpha isoform (Tramtrack ...	28	8.7
79	LEM2_CAEEL (Q9XTB5) LEM protein 2 (Ce-MAN1) (MAN1 homolog)	28	8.7
80	Y157_MYCPN (P75588) Hypothetical protein MG144 homolog (VXpSPT7_...	28	8.7
81	SFRS6_HUMAN (Q13247) Splicing factor, arginine/serine-rich 6 (Pr...	28	8.7
82	DBP2_KLULA (Q6CIV2) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)	28	8.7
83	H12_ARATH (P26569) Histone H1.2	28	8.7

>HOX1A_MAIZE (P46605) Homeobox protein HOX1A|
          Length = 719

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 24/64 (37%), Positives = 37/64 (57%)
 Frame = +3

Query: 204 RGRKGSQITASKKYLRRSAHSSARVLRSTSKDKSKTPNEPVSPLRSAHSSPRVLRSTPKN 383
           RG+KGSQ    + Y   S++S  RVLRSTS  K+ +     +P++ A    ++ R++  N
Sbjct: 57  RGKKGSQGLTGQAYTLMSSNSDVRVLRSTSSSKTTSTEHVQAPVQPAAKRRKMSRAS--N 114

Query: 384 KSQT 395
           KS T
Sbjct: 115 KSST 118

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>H12_HUMAN (P16403) Histone H1.2 (Histone H1d)|
          Length = 212

 Score = 35.0 bits (79), Expect = 0.093
 Identities = 26/92 (28%), Positives = 41/92 (44%)
 Frame = +3

Query: 129 TSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKSK 308
           T ASG  + NKK  +  + P  K   G K  +   + K  +++A  +     +  K   K
Sbjct: 98  TGASGSFKLNKKAASGEAKPKVKKAGGTKPKKPVGAAKKPKKAAGGA-----TPKKSAKK 152

Query: 309 TPNEPVSPLRSAHSSPRVLRSTPKNKSQTPKK 404
           TP +   P  +A  + +V +S  K K   PKK
Sbjct: 153 TPKKAKKP-AAATVTKKVAKSPKKAKVAKPKK 183

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>MSH6_YEAST (Q03834) MutS protein homolog 6|
          Length = 1242

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
 Frame = +3

Query: 219 SQITASKKYLRRSAHSSARVLRSTSKDKSKTPNEP-VSPLRS---AHSSPRVLRSTPKNK 386
           ++ T+ KK+   ++HSS+   R+ S+D SK  + P  +P RS   +HS P     + K  
Sbjct: 211 AETTSKKKFSYNTSHSSSPFTRNISRDNSKKKSRPNQAPSRSYNPSHSQPSATSKSSKFN 270

Query: 387 SQTPKK 404
            Q  ++
Sbjct: 271 KQNEER 276

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>NFH_HUMAN (P12036) Neurofilament triplet H protein (200 kDa neurofilament|
           protein) (Neurofilament heavy polypeptide) (NF-H)
          Length = 1026

 Score = 33.9 bits (76), Expect = 0.21
 Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
 Frame = +3

Query: 150 QENKKVGNDSSSPPTKGKRGRKGSQITASK-KYLRRSAHSSARVLRSTSKDKSKTPNEPV 326
           ++ K    + +  P K K   K    +  K K   ++   S    +S  K+++K+P +  
Sbjct: 656 EKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAK 715

Query: 327 SPLRSAHSSPRVLRSTPKNKSQTPKK 404
           SP++    SP   +S  K +++TP+K
Sbjct: 716 SPVKEEAKSPEKAKSPVKEEAKTPEK 741



 Score = 32.7 bits (73), Expect = 0.46
 Identities = 22/106 (20%), Positives = 46/106 (43%)
 Frame = +3

Query: 87  RREGRSAVIIYMDKTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHS 266
           + E +S   +   + + S   +E K      S    K     +      +K  ++  A S
Sbjct: 623 KEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKS 682

Query: 267 SARVLRSTSKDKSKTPNEPVSPLRSAHSSPRVLRSTPKNKSQTPKK 404
             +  +S  K ++K+P +  SP++    SP   +S  K ++++P+K
Sbjct: 683 PEKA-KSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEK 727



 Score = 31.2 bits (69), Expect = 1.3
 Identities = 25/111 (22%), Positives = 46/111 (41%), Gaps = 5/111 (4%)
 Frame = +3

Query: 87  RREGRSAVIIYMDKTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHS 266
           + E +S   +   + + S   +E K      S    + K   +      +K   +  A S
Sbjct: 535 KEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKS 594

Query: 267 SARV-----LRSTSKDKSKTPNEPVSPLRSAHSSPRVLRSTPKNKSQTPKK 404
            A        +S  K+++K+P E  SP++    SP  ++S  K KS T ++
Sbjct: 595 PAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEE 645



 Score = 29.6 bits (65), Expect = 3.9
 Identities = 23/99 (23%), Positives = 36/99 (36%), Gaps = 7/99 (7%)
 Frame = +3

Query: 135  ASGLVQENKKVGNDSSSP-------PTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTS 293
            A   V+E  K    + SP       P K K   K   +       +  A   AR      
Sbjct: 728  AKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEAR------ 781

Query: 294  KDKSKTPNEPVSPLRSAHSSPRVLRSTPKNKSQTPKKQV 410
                K P +  SP++    SP   +S  K  ++ P+K++
Sbjct: 782  SPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEI 820



 Score = 29.6 bits (65), Expect = 3.9
 Identities = 14/57 (24%), Positives = 33/57 (57%)
 Frame = +3

Query: 234 SKKYLRRSAHSSARVLRSTSKDKSKTPNEPVSPLRSAHSSPRVLRSTPKNKSQTPKK 404
           +K  ++  A S  +  +S  K+++K+P +  SP++    +P   +S  K ++++P+K
Sbjct: 700 AKSPVKEEAKSPEKA-KSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEK 755

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>H14_MOUSE (P43274) Histone H1.4 (H1 VAR.2) (H1e)|
          Length = 218

 Score = 33.5 bits (75), Expect = 0.27
 Identities = 26/115 (22%), Positives = 47/115 (40%), Gaps = 23/115 (20%)
 Frame = +3

Query: 129 TSASGLVQENKKVGNDSSSPPTK-------------GKRGRKGSQITASKKYLRRSAHSS 269
           T ASG  + NKK  +  + P  K              K+ +K +    +KK  +++   +
Sbjct: 98  TGASGSFKLNKKAASGEAKPKAKRAGAAKAKKPAGAAKKPKKAAGTATAKKSTKKTPKKA 157

Query: 270 ARVLRSTSKDKSKTPNE---------PVSPLRSAHSSPRVLR-STPKNKSQTPKK 404
            +   +    K+K+P +         P SP ++    P+  +  T K K+  PKK
Sbjct: 158 KKPAAAAGAKKAKSPKKAKATKAKKAPKSPAKAKTVKPKAAKPKTSKPKAAKPKK 212

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>H13_MOUSE (P43277) Histone H1.3 (H1 VAR.4) (H1d)|
          Length = 220

 Score = 33.5 bits (75), Expect = 0.27
 Identities = 24/92 (26%), Positives = 41/92 (44%)
 Frame = +3

Query: 129 TSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKSK 308
           T ASG  + NKK  +  + P  K     K  +   + K  +++  ++     +  K   K
Sbjct: 99  TGASGSFKLNKKAASGEAKPKAKKAGAAKAKKPAGAAKKPKKATGAA-----TPKKTAKK 153

Query: 309 TPNEPVSPLRSAHSSPRVLRSTPKNKSQTPKK 404
           TP +   P  +A  + +V +S  K K+  PKK
Sbjct: 154 TPKKAKKPAAAA-GAKKVSKSPKKVKAAKPKK 184

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>H12_MOUSE (P15864) Histone H1.2 (H1 VAR.1) (H1c)|
          Length = 211

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 24/99 (24%), Positives = 43/99 (43%)
 Frame = +3

Query: 108 VIIYMDKTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRS 287
           +++    T ASG  + NKK  +  + P  K     K  +   + K  +++  ++     +
Sbjct: 91  ILVQTKGTGASGSFKLNKKAASGEAKPQAKKAGAAKAKKPAGAAKKPKKATGAA-----T 145

Query: 288 TSKDKSKTPNEPVSPLRSAHSSPRVLRSTPKNKSQTPKK 404
             K   KTP +   P  +A  + +V +S  K K   PKK
Sbjct: 146 PKKAAKKTPKKAKKPAAAA-VTKKVAKSPKKAKVTKPKK 183

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>MLH_TETTH (P40631) Micronuclear linker histone polyprotein (MIC LH)|
           [Contains: Micronuclear linker histone-alpha;
           Micronuclear linker histone-beta; Micronuclear linker
           histone-delta; Micronuclear linker histone-gamma]
          Length = 633

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
 Frame = +3

Query: 126 KTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKS 305
           K+S+ G  ++N K    S S      + RK +  + SKK        +    RS SK KS
Sbjct: 493 KSSSKG--KKNSKSNTRSKSKSKSASKSRKNA--SKSKKDTTNHGRQTRSKSRSESKSKS 548

Query: 306 KTPNEPVSPLR-----SAHSSPRVLRSTPKNKSQTPKK 404
           + PN+P + +         SS R  R   +++SQ+ KK
Sbjct: 549 EAPNKPSNKMEVIEQPKEESSDRKRR---ESRSQSAKK 583



 Score = 31.6 bits (70), Expect = 1.0
 Identities = 32/108 (29%), Positives = 48/108 (44%)
 Frame = +3

Query: 81  SSRREGRSAVIIYMDKTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSA 260
           SS  +GRS       + ++S   Q+    G  SSS      +GRK S  T++K   R S+
Sbjct: 212 SSASQGRSQSSSSNRRKASSSKDQK----GTRSSSRKASNSKGRKNS--TSNK---RNSS 262

Query: 261 HSSARVLRSTSKDKSKTPNEPVSPLRSAHSSPRVLRSTPKNKSQTPKK 404
            SS R   S +K  S + N+  S  +   SS    R    +K++   K
Sbjct: 263 SSSKRSSSSKNKKSSSSKNKKSSSSKGRKSSSSRGRKASSSKNRKSSK 310

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>MARCS_CHICK (P16527) Myristoylated alanine-rich C-kinase substrate (MARCKS)|
          Length = 280

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
 Frame = +3

Query: 150 QENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKSKTPN-EPV 326
           QEN  V  +  + P   + G++  Q   S          +A    ++ K+ ++  + EP 
Sbjct: 32  QENGHVKVNGDASPAAAEAGKEEVQANGSAPAEETGKEEAASSEPASEKEAAEAESTEPA 91

Query: 327 SPLRSAHSSPRVLRSTPKNKSQTPKKQ 407
           SP     S      +TP + S+TPKK+
Sbjct: 92  SPAEGEASPKTEEGATPSSSSETPKKK 118

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>H1_SALTR (P02254) Histone H1|
          Length = 194

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 6/98 (6%)
 Frame = +3

Query: 129 TSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKSK 308
           T ASG  + NKK     +  P K     K  ++ A K    +     A      +K   K
Sbjct: 90  TGASGSFKLNKKAVE--AKKPAKKAAAPKAKKVAAKKPAAAKKPKKVAAKKAVAAKKSPK 147

Query: 309 TPNEPVSPLRSAHSSPRVLRST------PKNKSQTPKK 404
              +P +P ++A S  +  ++       PK  +++PKK
Sbjct: 148 KAKKPATPKKAAKSPKKATKAAKPKAAKPKKAAKSPKK 185

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>H14_HUMAN (P10412) Histone H1.4 (Histone H1b)|
          Length = 218

 Score = 32.7 bits (73), Expect = 0.46
 Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 23/115 (20%)
 Frame = +3

Query: 129 TSASGLVQENKKVGNDSSSPPTK-------------GKRGRKGSQITASKKYLRRSAHSS 269
           T ASG  + NKK  +  + P  K              K+ +K +     KK  +++   +
Sbjct: 98  TGASGSFKLNKKAASGEAKPKAKKAGAAKAKKPAGAAKKPKKATGAATPKKSAKKTPKKA 157

Query: 270 ARVLRSTSKDKSKTPNE---------PVSPLRSAHSSPRVLR-STPKNKSQTPKK 404
            +   +    K+K+P +         P SP ++    P+  +  T K K+  PKK
Sbjct: 158 KKPAAAAGAKKAKSPKKAKAAKPKKAPKSPAKAKAVKPKAAKPKTAKPKAAKPKK 212

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>H12_RAT (P15865) Histone H1.2 (H1d)|
          Length = 218

 Score = 32.7 bits (73), Expect = 0.46
 Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 23/115 (20%)
 Frame = +3

Query: 129 TSASGLVQENKKVGNDSSSPPTK-------------GKRGRKGSQITASKKYLRRSAHSS 269
           T ASG  + NKK  +  + P  K              K+ +K +     KK  +++   +
Sbjct: 98  TGASGSFKLNKKAASGEAKPKAKKAGAAKAKKPAGAAKKPKKATGTATPKKSTKKTPKKA 157

Query: 270 ARVLRSTSKDKSKTPNE---------PVSPLRSAHSSPRVLR-STPKNKSQTPKK 404
            +   +    K+K+P +         P SP ++    P+  +  T K K+  PKK
Sbjct: 158 KKPAAAAGAKKAKSPKKAKATKAKKAPKSPAKARAVKPKAAKPKTSKPKAAKPKK 212

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>YJY1_SCHPO (Q9USN8) Hypothetical protein C132.01c in chromosome III|
          Length = 1021

 Score = 32.3 bits (72), Expect = 0.61
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 8/53 (15%)
 Frame = +3

Query: 171 NDSSSPPTKG--------KRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKS 305
           N+ S+P T G        KRG+KGS++  +KK   +    + R  R T+ ++S
Sbjct: 751 NNQSTPDTTGSDIHIVSEKRGKKGSKVITAKKVSAKERREARRARRQTALEES 803

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>YR871_MIMIV (Q5UP41) Hypothetical protein R871|
          Length = 561

 Score = 32.3 bits (72), Expect = 0.61
 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
 Frame = +3

Query: 171 NDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKS----KTPNEPVSPLR 338
           N SSS      RGR   +  +SKK+     H S++  +S+ +DKS    K+  +     +
Sbjct: 122 NKSSSKDKSPSRGRSPKRHKSSKKHKSSKKHKSSKHDKSSKRDKSSKRHKSHKKKDKSHK 181

Query: 339 SAHSSPRVLRSTPKNKSQT 395
             + SP   RS  +++S +
Sbjct: 182 KRYRSPSSDRSLSRDRSSS 200

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>SCW11_YEAST (P53189) Probable family 17 glucosidase SCW11 precursor (EC|
           3.2.1.-) (Soluble cell wall protein 11)
          Length = 542

 Score = 32.3 bits (72), Expect = 0.61
 Identities = 24/91 (26%), Positives = 39/91 (42%)
 Frame = +3

Query: 126 KTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKS 305
           +TS S   QE+     +S++ PT        S  T+S      S+ +S+    STS   S
Sbjct: 202 QTSTSIASQES----TESTNTPTSSSTSSSTSSSTSSSTSSSTSSSTSSSTSSSTSSSTS 257

Query: 306 KTPNEPVSPLRSAHSSPRVLRSTPKNKSQTP 398
            T     +    + SS   + S+PK  + +P
Sbjct: 258 STQETAATTSEGSSSSSAAITSSPKAIAYSP 288

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>VE2_HPV38 (Q80910) Regulatory protein E2|
          Length = 441

 Score = 32.3 bits (72), Expect = 0.61
 Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
 Frame = +3

Query: 54  P*VSQDWPISSRREGRSAVIIYMDKTSASGL---VQENKKVGNDSSSPPTKGKRGRKGSQ 224
           P  S   P+    +  S   +    TS S      Q  ++ G  +SSP T  +R RKG +
Sbjct: 197 PVTSSTPPVGDSTDSASRAALPEPSTSVSPERPPSQTARRYGRKASSPSTTSRRQRKGQR 256

Query: 225 ITASKKYLRRSAHSSARVLRSTSKD--KSKTPNEPVSPLR 338
            T   +  RR + S +R      +D  +S +    VSP R
Sbjct: 257 ETTGTQ-RRRKSRSRSRSTNRGGRDTRRSSSRGSSVSPTR 295

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>VAC7_YEAST (P53950) Vacuolar segregation protein 7|
          Length = 1165

 Score = 32.3 bits (72), Expect = 0.61
 Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
 Frame = +3

Query: 75  PISSRREGRSAVIIYMDKTSASGLVQENKKVGNDSSSPPTKG----KRGRKG-----SQI 227
           P SS R  +S++++  +   AS +    KK    S++ PT      +  R       S  
Sbjct: 143 PSSSLRNKKSSLLVASNPAFASDVELSKKKPAVISNNMPTSNIALYQTARSANIHGPSST 202

Query: 228 TASKKYLRRSAHSSARVLRSTSKDKSKTPNEPVSPL--RSAHSSPRVL 365
           +ASK + + SA S+     +++   S TP  P+ PL   S  + P+++
Sbjct: 203 SASKAFRKASAFSNNTAPSTSNNIGSNTPPAPLLPLPSLSQQNKPKII 250

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>CCNL2_MOUSE (Q9JJA7) Cyclin-L2 (Cyclin Ania-6b) (Paneth cell-enhanced|
           expression protein) (PCEE)
          Length = 518

 Score = 32.0 bits (71), Expect = 0.79
 Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
 Frame = +3

Query: 123 DKTSASGLVQENKKVGNDSSSPPTKGKRGR--KGSQITASKK-----YLRRSAHSSARVL 281
           D  S SG  +   +  + S SPP +  RG   KGS++  S+K     YL +  H S    
Sbjct: 404 DSGSTSGGSKSQSRSRSRSDSPPRQVHRGAPYKGSEVRGSRKSKDCKYLTQKPHKSRS-- 461

Query: 282 RSTSKDKSKT 311
           RS+S+ +S++
Sbjct: 462 RSSSRSRSRS 471

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>SFRS4_MOUSE (Q8VE97) Splicing factor, arginine/serine-rich 4|
          Length = 489

 Score = 32.0 bits (71), Expect = 0.79
 Identities = 31/108 (28%), Positives = 44/108 (40%), Gaps = 20/108 (18%)
 Frame = +3

Query: 126 KTSASGLVQENKKVGNDSSSPP---------TKGKRGRKGSQIT-----------ASKKY 245
           K S+S    + KK  + S SP           K + G++GS+             A  + 
Sbjct: 382 KVSSSSSSSKKKKDTDHSRSPSRSVSKEREHAKAESGQRGSRAEGESEAPNPEPRARSRS 441

Query: 246 LRRSAHSSARVLRSTSKDKSKTPNEPVSPLRSAHSSPRVLRSTPKNKS 389
             +S  +     RS SK  SKT +   SP RSA  SP   RS   ++S
Sbjct: 442 TSKSKPNVPAESRSRSKSASKTRSRSKSPSRSASRSPSRSRSRSHSRS 489

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>IF2_BARQU (Q6G0P2) Translation initiation factor IF-2|
          Length = 845

 Score = 32.0 bits (71), Expect = 0.79
 Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
 Frame = +3

Query: 192 TKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKSKTPNEPVSPLRSAHSS--PRVL 365
           T+ K   +  +I   ++ LR++   +   +    + + K P    SPL SAHSS  P  +
Sbjct: 112 TREKVEEQARRIKEREESLRQAVQETE--IHQEEQKEEKNPPVQTSPLSSAHSSIEPIDI 169

Query: 366 RSTPKNKSQTPKKQVN 413
             TPKN + T K++ +
Sbjct: 170 AITPKNITVTEKRKAD 185

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>REF2_YEAST (P42073) RNA end formation protein 2|
          Length = 533

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 16/63 (25%), Positives = 32/63 (50%)
 Frame = +3

Query: 210 RKGSQITASKKYLRRSAHSSARVLRSTSKDKSKTPNEPVSPLRSAHSSPRVLRSTPKNKS 389
           +KGS  T +K  L++   SS   ++ + K+K K  ++    +++      +L +  KN S
Sbjct: 184 QKGSNSTGTKANLKKKLASSKAKIKDSEKEKEKEKDKSKVKMKTKLKPSPLLNNDDKNSS 243

Query: 390 QTP 398
            +P
Sbjct: 244 PSP 246

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>VRK3_HUMAN (Q8IV63) Serine/threonine-protein kinase VRK3 (EC 2.7.11.1)|
           (Vaccinia-related kinase 3)
          Length = 474

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
 Frame = +3

Query: 177 SSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKSK----TPNEPVSPLRSA 344
           +SS  T  K+ +  S +T+ +  L     SS      +S ++SK     P  P S  +  
Sbjct: 53  NSSFETSPKKVKWSSTVTSPRLSLFSDGDSSESEDTLSSSERSKGSGSRPPTPKSSPQKT 112

Query: 345 HSSPRVLRSTPKNKSQTPKK 404
             SP+V R +P+  S +P+K
Sbjct: 113 RKSPQVTRGSPQKTSCSPQK 132

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>SON_HUMAN (P18583) SON protein (SON3) (Negative regulatory element-binding|
            protein) (NRE-binding protein) (DBP-5) (Bax antagonist
            selected in saccharomyces 1) (BASS1)
          Length = 2426

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
 Frame = +3

Query: 150  QENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRS-TSKDKSKTPNEPV 326
            ++N+K     S  P++  R    S+   S+   RR + S +   RS T   +S+TP+   
Sbjct: 1912 RDNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRS 1971

Query: 327  -SPLRSAHSSPRVLRSTPKNKSQTPKKQ 407
             +P R + +  R  R TP  +S+TP ++
Sbjct: 1972 RTPSRRSRTPSRRSR-TPSRRSRTPSRR 1998

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>KIN4_YEAST (Q01919) Serine/threonine-protein kinase KIN4 (EC 2.7.11.1)|
          Length = 800

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
 Frame = +3

Query: 33  KAVQQGLP*VSQDWPISSRREGRSAVIIYMDKTSASG---LVQENKKVGNDSSSPPTKGK 203
           KA + G P  S D       E  S +++  + T+++    +  + + VG+ S+       
Sbjct: 605 KAAENGFPRESID------PESTSTILVTKEPTNSTDEDHVESQLENVGHSSNKSDASSD 658

Query: 204 RGRKGSQITASKKYLRRSAHSSARVLRSTSKDKSKTPNEPVSPLRSAHSSPRVLRSTPKN 383
           +  K  +I   K++   S +SS    RST + ++   N P  P+ S + S +  RS  K 
Sbjct: 659 KDSK--KIYEKKRFSFMSLYSSLNGSRSTVESRTSKGNAP--PVSSRNPSGQSNRSNIKI 714

Query: 384 KSQTPK 401
             Q P+
Sbjct: 715 TQQQPR 720

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>H1L_MYTTR (Q05831) Sperm-specific protein PHI-2B (PL-II*) (Sperm-specific|
           linker histone H1-like protein) [Contains:
           Sperm-specific protein PHI-3 (Protamine-like protein
           PHI-3) (PL-IV)]
          Length = 202

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 7/112 (6%)
 Frame = +3

Query: 93  EGRSAVIIYMDKTSASGLVQENKKVGNDSSSPPTKGKRGR----KGSQITASKKYLRRSA 260
           +G  + ++   KTSA             + + P K K+ +    K S+  ++    ++S 
Sbjct: 92  KGLKSGVLVRPKTSAGASGATGSFRVGKAPASPKKAKKAKSPKKKSSKNKSNNAKAKKSP 151

Query: 261 HSSARVLRSTSKDKSKTPNEPVSPL--RSAHSSPRV-LRSTPKNKSQTPKKQ 407
              A V +ST K K+K P  P      ++A  SP+   R +PK K+    K+
Sbjct: 152 RKKAAVKKST-KSKAKKPKSPKKKAAKKTARKSPKKKARKSPKKKAAKKSKK 202

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>H13_RABIT (P02251) Histone H1.3|
          Length = 213

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 20/94 (21%), Positives = 39/94 (41%)
 Frame = +3

Query: 120 MDKTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKD 299
           +DK +ASG  +   K    +      G   +K  +   +KK ++++   + +  ++ +K 
Sbjct: 108 LDKKAASGEAKPKPKKAGAAKPKKPAGATPKKPKKAAGAKKAVKKTPKKAPKP-KAAAKP 166

Query: 300 KSKTPNEPVSPLRSAHSSPRVLRSTPKNKSQTPK 401
           K   P  P    +S   +  V     K K+  PK
Sbjct: 167 KVAKPKSPAKVAKSPKKAKAVKPKAAKPKAPKPK 200

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>VE2_HPV47 (P22420) Regulatory protein E2|
          Length = 506

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
 Frame = +3

Query: 63  SQDWPISSRREGRSAVIIYMDKTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKK 242
           S+    +SRR GR +      + S S    +  + GN       +G++GR GS     ++
Sbjct: 311 SRSTSTTSRRGGRGSSTRQRSR-SPSTYTSKRSREGNTRGRG--RGRQGRAGSSGGREQR 367

Query: 243 YLRRS----AHSSARVLRSTSKDKSKTPNEPVSPLRS 341
             RRS      SS RV R + K +  +P+E    LRS
Sbjct: 368 RRRRSFSTSPDSSKRVRRESPKYRGVSPSEVGKQLRS 404

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>SFRS7_HUMAN (Q16629) Splicing factor, arginine/serine-rich 7 (Splicing factor|
           9G8)
          Length = 238

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 22/71 (30%), Positives = 33/71 (46%)
 Frame = +3

Query: 192 TKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKSKTPNEPVSPLRSAHSSPRVLRS 371
           ++G+R R  S   +    LRRS  +S R  RS S   S+    P      + S  R   S
Sbjct: 150 SRGRRSRSASPRRSRSISLRRSRSASLRRSRSGSIKGSRYFQSPSRSRSRSRSISRPRSS 209

Query: 372 TPKNKSQTPKK 404
             K++S +PK+
Sbjct: 210 RSKSRSPSPKR 220

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>H12_DROVI (Q94555) Histone H1.2|
          Length = 250

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
 Frame = +3

Query: 126 KTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITA--SKKYLRRSAHSSA-----RVLR 284
           K  AS + ++ KKV N S++  TK K     ++  A  + K L +SA +       R  +
Sbjct: 125 KPKASAVEKKTKKV-NASAARATKKKSSTSTTKKAAGAADKKLSKSAPTKKSVEKKRADK 183

Query: 285 STSKDKSKTPNEPVSPLRSAHSSPRVLRSTPK--NKSQTPKKQVN 413
           + +KD  KT      P  +   S      TPK   KS  PKK V+
Sbjct: 184 AKAKDAKKTGTIKAKPTTAKAKSSATKPKTPKPKTKSAKPKKVVS 228

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>YBL7_YEAST (P38213) Protein YBR007C|
          Length = 736

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 22/74 (29%), Positives = 35/74 (47%)
 Frame = +3

Query: 132 SASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKSKT 311
           S++  + +   + ND S PPT   +  K      S K L +S        R+ +K+K   
Sbjct: 337 SSTSTITKTNTMTNDISLPPTPPYKAHKKKTSLNSLKKLFKSP-------RTRAKNKKDL 389

Query: 312 PNEPVSPLRSAHSS 353
            +E  SP+RSA +S
Sbjct: 390 ESEGSSPIRSATNS 403

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>RED2_HUMAN (Q9NS39) Double-stranded RNA-specific editase B2 (EC 3.5.-.-)|
           (dsRNA adenosine deaminase B2) (RNA-dependent adenosine
           deaminase 3) (RNA-editing deaminase 2) (RNA-editing
           enzyme 2)
          Length = 739

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +3

Query: 129 TSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYL 248
           +++S  V+EN+ VGN ++ PP  G R R G+     K+ L
Sbjct: 63  STSSAEVKENRNVGNLAARPPPSGDRARGGAPGAKRKRPL 102

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>CSPG2_CHICK (Q90953) Versican core protein precursor (Large fibroblast|
            proteoglycan) (Chondroitin sulfate proteoglycan core
            protein 2) (PG-M)
          Length = 3562

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 32/121 (26%), Positives = 46/121 (38%), Gaps = 11/121 (9%)
 Frame = +3

Query: 60   VSQDWPISSRREGRSAVIIYMDKTSASGLVQENKKVGNDSSSPPTK-----------GKR 206
            +SQ   +SS         +YM   SAS   +E   V  +S S   K            K 
Sbjct: 2917 MSQHATVSSSSSEEKHSTVYMQTKSASTEYEETDSVSLNSVSQNPKSSVTVWLVNGVSKY 2976

Query: 207  GRKGSQITASKKYLRRSAHSSARVLRSTSKDKSKTPNEPVSPLRSAHSSPRVLRSTPKNK 386
                   T+S K   +S HSS    +  S D + T   P + L +  SS  V    P+++
Sbjct: 2977 PEVIIPSTSSAKDSDQSDHSSDGTFKEVSSDMAATYKPPTTDLDTTVSSLLVFSPEPESE 3036

Query: 387  S 389
            S
Sbjct: 3037 S 3037

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>TWST2_RAT (P97831) Twist-related protein 2|
          Length = 160

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
 Frame = +3

Query: 93  EGRSAVIIYMDK--TSASGLVQENKKVG--------NDSSSPPTKGKRGRKGSQITASKK 242
           EG S+ +  +D   TS   L ++ K+ G        +     PT GKRG+KGS    S +
Sbjct: 3   EGSSSPVSPVDSLGTSEEELERQPKRFGRKRRYSKKSSEDGSPTPGKRGKKGSPSAQSFE 62

Query: 243 YLRRSAHSSARVLRST-SKDKSKTPNEPVSPLRSAHSSPRVLRSTPKNK 386
            L+     S R+L +   + ++++ NE  + LR      +++ + P +K
Sbjct: 63  ELQ-----SQRILANVRERQRTQSLNEAFAALR------KIIPTLPSDK 100

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>TWST2_MOUSE (Q9D030) Twist-related protein 2 (Dermis expressed protein 1)|
           (Dermo-1)
          Length = 160

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
 Frame = +3

Query: 93  EGRSAVIIYMDK--TSASGLVQENKKVG--------NDSSSPPTKGKRGRKGSQITASKK 242
           EG S+ +  +D   TS   L ++ K+ G        +     PT GKRG+KGS    S +
Sbjct: 3   EGSSSPVSPVDSLGTSEEELERQPKRFGRKRRYSKKSSEDGSPTPGKRGKKGSPSAQSFE 62

Query: 243 YLRRSAHSSARVLRST-SKDKSKTPNEPVSPLRSAHSSPRVLRSTPKNK 386
            L+     S R+L +   + ++++ NE  + LR      +++ + P +K
Sbjct: 63  ELQ-----SQRILANVRERQRTQSLNEAFAALR------KIIPTLPSDK 100

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>TWST2_HUMAN (Q8WVJ9) Twist-related protein 2 (Dermis expressed protein 1)|
           (Dermo-1)
          Length = 160

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
 Frame = +3

Query: 93  EGRSAVIIYMDK--TSASGLVQENKKVG--------NDSSSPPTKGKRGRKGSQITASKK 242
           EG S+ +  +D   TS   L ++ K+ G        +     PT GKRG+KGS    S +
Sbjct: 3   EGSSSPVSPVDSLGTSEEELERQPKRFGRKRRYSKKSSEDGSPTPGKRGKKGSPSAQSFE 62

Query: 243 YLRRSAHSSARVLRST-SKDKSKTPNEPVSPLRSAHSSPRVLRSTPKNK 386
            L+     S R+L +   + ++++ NE  + LR      +++ + P +K
Sbjct: 63  ELQ-----SQRILANVRERQRTQSLNEAFAALR------KIIPTLPSDK 100

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>H11_DROVI (Q24704) Histone H1.1|
          Length = 250

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 9/105 (8%)
 Frame = +3

Query: 126 KTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITA--SKKYLRRSAHSSARVLRSTS-- 293
           K  AS + ++ KKV N S++  TK K     ++  A  + K L +SA +   V +  +  
Sbjct: 125 KPKASAVEKKTKKV-NASAARATKSKSSTSTTKKAAGAADKKLSKSAAAKKNVEKKKADK 183

Query: 294 ---KDKSKTPNEPVSPLRSAHSSPRVLRSTPKNK--SQTPKKQVN 413
              KD  KT      P  +   S      TPK K  S  PKK V+
Sbjct: 184 EKAKDAKKTGTIKAKPTTAKAKSSATKPKTPKPKTTSAKPKKVVS 228

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>EAF7_KLULA (Q6CX31) Chromatin modification-related protein EAF7|
          Length = 402

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 22/90 (24%), Positives = 36/90 (40%)
 Frame = +3

Query: 123 DKTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDK 302
           DK    G   ++ +V  +S  P    +R +   +    +  ++     +     S  +  
Sbjct: 184 DKAKLKGAESQDTQVEQESEEPR---EREKDIDEKDTEQNNVQAKQEMATTPPVSVGESV 240

Query: 303 SKTPNEPVSPLRSAHSSPRVLRSTPKNKSQ 392
           S+  NEPV     AH  PR  RST   +SQ
Sbjct: 241 SELANEPVDEPVDAHKKPRTRRSTRLTRSQ 270

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>RSP1_CAEEL (Q23121) Probable splicing factor, arginine/serine-rich 1|
           (RNA-binding protein srp-5) (CeSRp75)
          Length = 312

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
 Frame = +3

Query: 177 SSSPPTKGKRGRKGSQITASK------KYLRRSAHSSARVLRSTSKDK-SKTPNEPVSPL 335
           S SPP + +R  K    + S+      +  R  + S  +V RS S  + S++P+E  SP 
Sbjct: 238 SRSPPKRSRRESKSKSRSRSRSRSADNRKSRSPSRSPKKVDRSPSPPRGSRSPSEKGSPR 297

Query: 336 RSAHSSP 356
           RS  +SP
Sbjct: 298 RSRSASP 304

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>SFRS8_HUMAN (Q12872) Splicing factor, arginine/serine-rich 8 (Suppressor of|
           white apricot protein homolog)
          Length = 951

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +3

Query: 231 ASKKYLR-RSAHSSARVLRSTSKDKSKTPNEPVSPLRSAHSSP 356
           AS+K  R RS H   +  RS S+ KSK  ++ VSP + A   P
Sbjct: 837 ASRKRTRSRSPHEKKKKRRSRSRTKSKARSQSVSPSKQAAPRP 879

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>EFTU1_SOYBN (Q43467) Elongation factor Tu, chloroplast precursor (EF-Tu)|
          Length = 479

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = +3

Query: 219 SQITASKKYLRRSAHSSARVLRSTSKDKSKTPNEPVSPLRSAHSSP-RVLRSTPKNKSQT 395
           S  TAS K +     SS+  L ST    S T    ++PL S+   P  VLR TP + + T
Sbjct: 4   SSATASSKLILLPHASSSSSLNSTPFRSSTTNTHKLTPLSSSFLHPTTVLRRTP-SSTTT 62

Query: 396 PKK 404
           P++
Sbjct: 63  PRR 65

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>ATU_DROME (Q94546) Another transcription unit protein|
          Length = 725

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
 Frame = +3

Query: 135 ASGLVQENKKVGNDS--SSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRST---SKD 299
           ASG  QE KK G+DS     PTK K+ R     + S + + + A ++A +       S D
Sbjct: 255 ASGSDQEKKKSGSDSDIEESPTKAKKSRLIDTDSDSNQDVGKKAPAAADIFGDADDISDD 314

Query: 300 KSKT-PNEPVSPLRSAHSSPRVLRSTPKNKSQT 395
           + +  P    SP+RS   S     S  ++ S +
Sbjct: 315 EDEAGPAARKSPVRSKSRSQSKSHSHSRSMSHS 347

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>H15_HUMAN (P16401) Histone H1.5 (Histone H1a)|
          Length = 225

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
 Frame = +3

Query: 129 TSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKSK 308
           T ASG  + NKK  +  + P  K     K  +   +     + A  + + ++ T K K+K
Sbjct: 101 TGASGSFKLNKKAASGEAKPKAKKAGAAKAKKPAGATPKKAKKAAGAKKAVKKTPK-KAK 159

Query: 309 TPNEPVSPLRSAHSSPRVLRST--PKNKSQTPKK 404
            P    + ++    SP+  ++   PK  +++P K
Sbjct: 160 KP--AAAGVKKVAKSPKKAKAAAKPKKATKSPAK 191

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>CJ012_HUMAN (Q8N655) Protein C10orf12|
          Length = 1247

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 8/96 (8%)
 Frame = +3

Query: 147  VQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKSKTPNEPV 326
            VQ  +K    SS P +K K    G  + ASK+     A  +    R  ++D+S  P +  
Sbjct: 1085 VQSKRKRTEGSSPPDSKNK----GPTVKASKEKHADGATKTPAAKRPAARDRSSQPPKKT 1140

Query: 327  S--------PLRSAHSSPRVLRSTPKNKSQTPKKQV 410
            S        P +SA  S    R   +N ++ P + +
Sbjct: 1141 SLKENKVKIPKKSAGKSCPPSRKEKENTNKRPSQSI 1176

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>CWC27_USTMA (Q4P7H2) Peptidyl-prolyl isomerase CWC27 (EC 5.2.1.8)|
          Length = 485

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
 Frame = +3

Query: 132 SASGLVQENKKVGNDS--SSPPTKGKRGRKGSQITAS-KKYLRRSAHSSA--RVLRSTSK 296
           S+  L++++K +   +  +S  TK       + I++  K++L +S+ S+    V +  SK
Sbjct: 236 SSHDLLKDDKHLSRQTIETSKSTKANTPAVSANISSKEKRFLAQSSSSTTPPAVTKQASK 295

Query: 297 DKSKTPNEPVSPLRSAHSSP 356
           D +     P + L+S HS P
Sbjct: 296 DGTSDAPHPTATLKSEHSGP 315

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>SWR1_YARLI (Q6CA87) Helicase SWR1 (EC 3.6.1.-)|
          Length = 1772

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
 Frame = +3

Query: 66  QDWPISSRREGR-SAVIIYMDKTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKK 242
           Q+  ++SRR  R SA      K+  +    ++K   +  S   +KGK   + S+++ S++
Sbjct: 320 QEEEVTSRRGSRRSAPTKAKGKSKTASKTSKSKSKASSKSKSKSKGKGQARASKLSKSRR 379

Query: 243 YLRRSAHSSARVLRSTSKDKSKTPNEP 323
           Y+         V  S+ ++    PN+P
Sbjct: 380 YVN-------AVDSSSEEESDYDPNKP 399

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>VE2_HPV09 (P36780) Regulatory protein E2|
          Length = 461

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
 Frame = +3

Query: 84  SRREGRSAVIIYMDKTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQ--ITASKKYLRRS 257
           SR +GR+       +T   G  +   +  +  S+ PT  +RGR G +   T S+   R  
Sbjct: 279 SRSKGRT-------ETERGGERRRRGRSSSADSTTPTDRRRGRGGGRGPTTRSQSRSRSR 331

Query: 258 AHSSARVLRSTSKDKSKTPNEPVSPLRS 341
           +HS +R    T+     +P+E  + +RS
Sbjct: 332 SHSRSRSRGGTASRVGVSPDEVGTRVRS 359

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>ATL_STAAW (Q8NX96) Bifunctional autolysin precursor [Includes:|
           N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28);
           Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
           (EC 3.2.1.96)]
          Length = 1256

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = +3

Query: 285 STSKDKSKTPNEPVSPLRSAHSSPRVLRSTPKNKSQTPKKQVN 413
           +TS  K+KT   P     SA + PR + +TPK      K QVN
Sbjct: 180 TTSAPKAKTEATPKVTTFSASAQPRSVAATPKTSLPKYKPQVN 222

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>ATL_STAAU (P52081) Bifunctional autolysin precursor [Includes:|
           N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28);
           Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
           (EC 3.2.1.96)]
          Length = 1256

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = +3

Query: 285 STSKDKSKTPNEPVSPLRSAHSSPRVLRSTPKNKSQTPKKQVN 413
           +TS  K+KT   P     SA + PR + +TPK      K QVN
Sbjct: 180 TTSAPKAKTEATPKVTTFSASAQPRSVAATPKTSLPKYKPQVN 222

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>ATL_STAAC (Q5HH31) Bifunctional autolysin precursor [Includes:|
           N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28);
           Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
           (EC 3.2.1.96)]
          Length = 1256

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = +3

Query: 285 STSKDKSKTPNEPVSPLRSAHSSPRVLRSTPKNKSQTPKKQVN 413
           +TS  K+KT   P     SA + PR + +TPK      K QVN
Sbjct: 180 TTSAPKAKTEATPKVTTFSASAQPRSVAATPKTSLPKYKPQVN 222

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>PI5PA_RAT (Q9JMC1) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC|
           3.1.3.56) (Proline-rich inositol polyphosphate
           5-phosphatase)
          Length = 1001

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +3

Query: 303 SKTPNEPVSPLRSAHSSPRVLRSTPKNKSQTPKKQ 407
           S  P+  +SP + +H +P  + STP ++ Q P +Q
Sbjct: 204 SPVPSPVLSPSQESHLAPATVTSTPASERQLPARQ 238

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>ATL_STAAS (Q6GAG0) Bifunctional autolysin precursor [Includes:|
           N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28);
           Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
           (EC 3.2.1.96)]
          Length = 1250

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = +3

Query: 285 STSKDKSKTPNEPVSPLRSAHSSPRVLRSTPKNKSQTPKKQVN 413
           +TS  K+KT   P     SA + PR + +TPK      K QVN
Sbjct: 180 TTSAPKAKTEATPKVTTFSASAQPRSVAATPKTSLPKYKPQVN 222

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>MAST3_HUMAN (O60307) Microtubule-associated serine/threonine-protein kinase 3 (EC|
            2.7.11.1)
          Length = 1309

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 24/82 (29%), Positives = 36/82 (43%)
 Frame = +3

Query: 159  KKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKSKTPNEPVSPLR 338
            +++G      P K +    G     S   + +SA  SA  L  T+ D S  P   +SPL 
Sbjct: 864  RRLGGPRDPAPEKSRASSSGGSGGGSGGRVPKSASVSALSLIITADDGSGGP--LMSPL- 920

Query: 339  SAHSSPRVLRSTPKNKSQTPKK 404
                SPR L S P ++  +P +
Sbjct: 921  ----SPRSLSSNPSSRDSSPSR 938

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>JHD1B_MOUSE (Q6P1G2) JmjC domain-containing histone demethylation protein 1B (EC|
            1.14.11.-) (F-box/LRR-repeat protein 10) (F-box and
            leucine-rich repeat protein 10) (F-box protein FBL10)
          Length = 1309

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
 Frame = +3

Query: 180  SSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKSKTPNEPVSPLRS--AHSS 353
            SS PT G    +G++    KK ++        V +  SK+ SK  N  +    S  AH S
Sbjct: 885  SSSPTAGP-STEGAEGPEEKKKVKMR-RKRRLVNKELSKELSKELNHEIQKTESTLAHES 942

Query: 354  PRVLRSTPKNKSQTPKKQVN 413
             + ++S P++++  PK+ ++
Sbjct: 943  QQPIKSEPESENDEPKRPLS 962

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>UNC89_CAEEL (O01761) Muscle M-line assembly protein unc-89 (Uncoordinated protein|
            89)
          Length = 8081

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
 Frame = +3

Query: 159  KKVGNDSSSPPTKGKRGRKGSQITASK-KYLRRSAHSSARVLRSTSKDKSKTPNEPVSPL 335
            K   ++  SP  K K   K  +  AS  K  +    S+A  L+S +K K K+P+ P    
Sbjct: 1782 KMADDEVKSPTKKEKSPEKVEEKPASPTKKEKTPEKSAAEELKSPTK-KEKSPSSPTKKT 1840

Query: 336  RSAHSSPRVLRSTPKNKSQTPKK 404
                      +   K KS TPKK
Sbjct: 1841 GDESKEKSPEKPEEKPKSPTPKK 1863



 Score = 29.6 bits (65), Expect = 3.9
 Identities = 21/115 (18%), Positives = 51/115 (44%)
 Frame = +3

Query: 63   SQDWPISSRREGRSAVIIYMDKTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKK 242
            +++ P S  ++  S V +  D+  +    +++ +   +  + PTK ++  + S     K 
Sbjct: 1766 AEEKPKSPTKKESSPVKMADDEVKSPTKKEKSPEKVEEKPASPTKKEKTPEKSAAEELKS 1825

Query: 243  YLRRSAHSSARVLRSTSKDKSKTPNEPVSPLRSAHSSPRVLRSTPKNKSQTPKKQ 407
              ++    S+   ++  + K K+P +P    +S         S  K KS++P+ +
Sbjct: 1826 PTKKEKSPSSPTKKTGDESKEKSPEKPEEKPKSPTPKKSPPGSPKKKKSKSPEAE 1880

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>YOJ4_CAEEL (P34627) Hypothetical protein ZK353.4|
          Length = 305

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 21/76 (27%), Positives = 34/76 (44%)
 Frame = +3

Query: 126 KTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKS 305
           K S + L  E  K+ N SSS     + G    +I +  KY +    +   +   T+  ++
Sbjct: 159 KNSLTDLKNEATKMANTSSSA---NRTGEISVEIVSPSKYFQCLLPTHNLIPEPTTAVQA 215

Query: 306 KTPNEPVSPLRSAHSS 353
            TP +P+S   SA  S
Sbjct: 216 STPEKPMSSAESAMES 231

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>NU124_SCHPO (Q09904) Nucleoporin nup124 (Nuclear pore protein nup124)|
          Length = 1159

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = +3

Query: 252 RSAHSSARVLRSTSKDKSKTPNEPVSPLRSAHSSPRVLRSTPKNKSQTPKK 404
           +S  SS+    ST++     P  P   ++S+H S    +  PK ++ T KK
Sbjct: 443 KSQFSSSPTKESTTRKSEVEPPSPSKEIKSSHFSVPEFKFEPKTEATTDKK 493

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>DACH1_MOUSE (Q9QYB2) Dachshund homolog 1 (Dach1)|
          Length = 751

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = +3

Query: 198 GKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKSKTPNEPVSPL--RSAHSSPRVLRS 371
           G  G   + ITAS      S+ SS+    S+S   S + +    PL  +  +S+P  + +
Sbjct: 115 GGGGASSTPITASTGSSSSSSSSSSSSSSSSSSSSSSSSSSSCGPLPGKPVYSTPSPVEN 174

Query: 372 TPKN 383
           TP+N
Sbjct: 175 TPQN 178

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>ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog (EC 3.6.1.-)|
           (ATP-dependent helicase xnp-1) (X-linked nuclear protein
           1)
          Length = 1359

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 21/91 (23%), Positives = 37/91 (40%)
 Frame = +3

Query: 126 KTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKS 305
           K S  GL ++ K      S    + K+ +K S+    K+    S   +    ++  + +S
Sbjct: 194 KKSKKGLKKKAKSESESESEDEKEVKKSKKKSKKVVKKE--SESEDEAPEKKKTEKRKRS 251

Query: 306 KTPNEPVSPLRSAHSSPRVLRSTPKNKSQTP 398
           KT +E  S    +        S+PK K + P
Sbjct: 252 KTSSEESSESEKSDEEEEEKESSPKPKKKKP 282

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>VE2_HPV5B (P26545) Regulatory protein E2|
          Length = 514

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
 Frame = +3

Query: 81  SSRREGRSAVIIYMDKTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSA 260
           S RR  RS        T +S   Q +++    + SP T+G RG +GS+  +    LRR  
Sbjct: 327 SPRRRSRSP------STYSSCTTQRSQRAR--AESPTTRGARGSRGSRGGSRGGRLRRRG 378

Query: 261 HSSA-------RVLRSTSKDKSKTPNEPVSPLRSAHS 350
            SS+       R    ++K +  +P E    LRS  S
Sbjct: 379 RSSSSSSPAHKRSRGGSAKLRGVSPGEVGGSLRSVSS 415

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>ICP0_EHV1V (P84445) Trans-acting transcriptional protein ICP0 (Infected cell|
           protein 0)
          Length = 532

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = +3

Query: 123 DKTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSK 296
           D +SA    QE+ +       PPT+G+  R+G +  A     RRSA    R  R+ S+
Sbjct: 245 DNSSAQAPRQEDSRPARARPGPPTRGR--RRGRRPAAPGPASRRSARLRRRQPRTNSR 300

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>ICP0_EHV1B (P28990) Trans-acting transcriptional protein ICP0|
          Length = 532

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = +3

Query: 123 DKTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSK 296
           D +SA    QE+ +       PPT+G+  R+G +  A     RRSA    R  R+ S+
Sbjct: 245 DNSSAQAPRQEDSRPARARPGPPTRGR--RRGRRPAAPGPASRRSARLRRRQPRTNSR 300

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>H15_MOUSE (P43276) Histone H1.5 (H1 VAR.5) (H1b)|
          Length = 222

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 31/122 (25%), Positives = 50/122 (40%), Gaps = 27/122 (22%)
 Frame = +3

Query: 129 TSASGLVQENKKVGNDSSSPPTK-----------GKRGRKGSQITASKKYLRR------- 254
           T ASG  + NKK  +  + P  K           G   +K  +   +KK +++       
Sbjct: 98  TGASGSFKLNKKAASGEAKPKAKKTGAAKAKKPAGATPKKPKKTAGAKKTVKKTPKKAKK 157

Query: 255 -SAHSSARVLRSTSKDKS-----KTPNEPVSP--LRSAHSSPRVLR-STPKNKSQTPKKQ 407
            +A    +V +S  K K+     K    P  P  ++S  S P+V +  T K K+   KK 
Sbjct: 158 PAAAGVKKVAKSPKKAKAAAKPKKAAKSPAKPKAVKSKASKPKVTKPKTAKPKAAKAKKA 217

Query: 408 VN 413
           V+
Sbjct: 218 VS 219

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>GYRA_RICPR (P41080) DNA gyrase subunit A (EC 5.99.1.3)|
          Length = 905

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 23/88 (26%), Positives = 42/88 (47%)
 Frame = +1

Query: 1   KKVNWVIFPSRKQFNKAYPKSPRTGLSVPAEKVGRRSSFIWTKHLLLVLFRRIKKLGMIH 180
           K+V    + S+K+  K      R+GLS+  E +  +  F+ + H  ++ F  I K+  + 
Sbjct: 541 KRVPLSSYRSQKRGGKG-----RSGLSMRDEDITTQV-FVGSTHTPMLFFSNIGKVYSLK 594

Query: 181 HLLLPRGKGEGKGPRLQQVKSISGDLHI 264
              LP    +GKG  +  + S+  + HI
Sbjct: 595 LYKLPLSNPQGKGRPMVNILSLQENEHI 622

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>PININ_MOUSE (O35691) Pinin|
          Length = 725

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 27/106 (25%), Positives = 40/106 (37%), Gaps = 13/106 (12%)
 Frame = +3

Query: 129 TSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRS------- 287
           +S SG    +      SSS      RGR  ++    ++ + R    ++ + RS       
Sbjct: 619 SSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDRKHRRSMDRKRRDTSGLERSHKSSKGG 678

Query: 288 ------TSKDKSKTPNEPVSPLRSAHSSPRVLRSTPKNKSQTPKKQ 407
                  SKDKS  P+   S   S+ S  R  RS    KS    K+
Sbjct: 679 SSRDRKGSKDKSSRPDRKRSISESSRSGKRSSRSERDRKSDRKDKR 724

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>H5_CHICK (P02259) Histone H5|
          Length = 189

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 21/71 (29%), Positives = 29/71 (40%)
 Frame = +3

Query: 192 TKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKSKTPNEPVSPLRSAHSSPRVLRS 371
           TKG       ++  S K  R        V RSTS  K+  P +  SP +   ++ R  R 
Sbjct: 84  TKGVGASGSFRLAKSDKAKRSPGKKKKAVRRSTSPKKAARPRKARSPAKKPKATARKAR- 142

Query: 372 TPKNKSQTPKK 404
             K    +PKK
Sbjct: 143 --KKSRASPKK 151

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>EAF7_CANAL (Q5A6Q7) Chromatin modification-related protein EAF7|
          Length = 445

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 10/89 (11%)
 Frame = +3

Query: 174 DSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKSK-------TPNEPVSP 332
           ++S+  T  +     + IT   K  + +  +   +      DK K       TP  P   
Sbjct: 89  NTSTEETTNQVSSGSANITKDTKNAKTTLDAKEPIQDKKEMDKEKSESSSLSTPEPPQRR 148

Query: 333 LRSAHS---SPRVLRSTPKNKSQTPKKQV 410
            RSA     S R LR TPK KSQ   +++
Sbjct: 149 TRSARDTTKSKRNLRDTPKEKSQYNDEEI 177

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>NIM1_NEUCR (P48479) G2-specific protein kinase nim-1 (EC 2.7.11.1)|
          Length = 779

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 1/86 (1%)
 Frame = +3

Query: 123 DKTSASGLVQENKKVGNDSSSP-PTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKD 299
           D++ A  LV   K++   S +P  T   R R       +   L      S + L + SK 
Sbjct: 531 DESEAEALVPSPKRITKSSKNPFSTVTTRSRPSLNSQQNSNVLPIHGLRSKQTLATRSKT 590

Query: 300 KSKTPNEPVSPLRSAHSSPRVLRSTP 377
            S   +    PLRSA S+P +    P
Sbjct: 591 VSGVSSIGQHPLRSAPSAPSLRDRKP 616

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>H101_CHICK (P08284) Histone H1.01|
          Length = 218

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 22/92 (23%), Positives = 33/92 (35%)
 Frame = +3

Query: 129 TSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKSK 308
           T ASG  + NKK G      P K     K  +  A K          A  ++ + K K+K
Sbjct: 99  TGASGSFRLNKKPGEVKEKAPRKRATAAKPKKPAAKKPAAAAKKPKKAAAVKKSPK-KAK 157

Query: 309 TPNEPVSPLRSAHSSPRVLRSTPKNKSQTPKK 404
            P    +   +           PK  +++P K
Sbjct: 158 KPAAAATKKAAKSPKKAAKAGRPKKAAKSPAK 189

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>FMT_ENTFA (Q82ZD8) Methionyl-tRNA formyltransferase (EC 2.1.2.9)|
          Length = 313

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = -1

Query: 353 TTMSGSQWTYWLIRCLTLVF*SRAKNPGTTMCRSPEILFTCCNLG 219
           TT  G+ W  W +  LT    +    PGT + RS + L+  C  G
Sbjct: 236 TTYQGTNWKIWAVTPLTE---TTTSAPGTIIQRSKKALWIACGEG 277

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>KC13_YEAST (P39962) Casein kinase I homolog 3 (EC 2.7.11.1)|
          Length = 524

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 20/97 (20%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
 Frame = +3

Query: 78  ISSRREGRSAVIIYMDKTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRS 257
           +++  + R+   +   K  A     ++      SS+P +  K+     +I  + KY+  +
Sbjct: 370 VNTNSKTRNTTPVATPKQQAQNSYNKDNSKSRISSNPQSFTKQQHVLKKIEPNSKYIPET 429

Query: 258 AHSSARVLRSTSK---DKSKTPNEPVSPLRSAHSSPR 359
             +  R ++S S+     S T N P  P  S+ ++P+
Sbjct: 430 HSNLQRPIKSQSQTYDSISHTQNSPFVPYSSSKANPK 466

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>FUSIP_MOUSE (Q9R0U0) FUS-interacting serine-arginine-rich protein 1|
           (TLS-associated protein with Ser-Arg repeats)
           (TLS-associated protein with SR repeats) (TASR)
           (TLS-associated serine-arginine protein) (TLS-associated
           SR protein) (Neural-specific SR pro
          Length = 262

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 31/107 (28%), Positives = 40/107 (37%)
 Frame = +3

Query: 75  PISSRREGRSAVIIYMDKTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRR 254
           P +SR  GR        + S S    +  K  N S S      R R  SQ     K   R
Sbjct: 144 PRNSRPTGRP-------RRSRSHSDNDRFKHRNRSFSRSKSNSRSRSKSQPKKEMKAKSR 196

Query: 255 SAHSSARVLRSTSKDKSKTPNEPVSPLRSAHSSPRVLRSTPKNKSQT 395
           S  +S    R TSK  SKT  +  S            RS  +++SQ+
Sbjct: 197 SRSASHTKTRGTSKTDSKTHYKSGSRYEKESRKKEPPRSKSQSRSQS 243

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>FUSIP_HUMAN (O75494) FUS-interacting serine-arginine-rich protein 1|
           (TLS-associated protein with Ser-Arg repeats)
           (TLS-associated protein with SR repeats) (TASR)
           (TLS-associated serine-arginine protein) (TLS-associated
           SR protein) (40 kDa SR-repressor pr
          Length = 262

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 31/107 (28%), Positives = 40/107 (37%)
 Frame = +3

Query: 75  PISSRREGRSAVIIYMDKTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRR 254
           P +SR  GR        + S S    +  K  N S S      R R  SQ     K   R
Sbjct: 144 PRNSRPTGRP-------RRSRSHSDNDRFKHRNRSFSRSKSNSRSRSKSQPKKEMKAKSR 196

Query: 255 SAHSSARVLRSTSKDKSKTPNEPVSPLRSAHSSPRVLRSTPKNKSQT 395
           S  +S    R TSK  SKT  +  S            RS  +++SQ+
Sbjct: 197 SRSASHTKTRGTSKTDSKTHYKSGSRYEKESRKKEPPRSKSQSRSQS 243

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>IE63_MCMVS (Q69154) Transcriptional regulator IE63 homolog (Protein UL69)|
          Length = 841

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 27/107 (25%), Positives = 39/107 (36%)
 Frame = +3

Query: 81  SSRREGRSAVIIYMDKTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSA 260
           SS  +GR +      + S  G  Q      + S SP T       G           R +
Sbjct: 540 SSATDGRRS-----RRGSRRGEAQRESNGHHSSKSPSTVSSTTVHGQNGARGDSAPSRKS 594

Query: 261 HSSARVLRSTSKDKSKTPNEPVSPLRSAHSSPRVLRSTPKNKSQTPK 401
             S +   +TSK+ SKT   P  P   + S     R   K+ S +P+
Sbjct: 595 QQSQQQPETTSKESSKTAAMPPPPSPCSPSPASRERRPSKSPSSSPR 641

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>PRP4B_MOUSE (Q61136) Serine/threonine-protein kinase PRP4 homolog (EC 2.7.11.1)|
           (PRP4 pre-mRNA-processing factor 4 homolog) (Pre-mRNA
           protein kinase)
          Length = 1007

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 10/119 (8%)
 Frame = +3

Query: 75  PISSRREGRSAVIIYMDKTSASGLVQENKKVGNDSSSPPTKGKR--------GRKGSQIT 230
           P+  R + +       ++ S    + + KK     S   + GK         GR   + +
Sbjct: 295 PVDLRDKSKDRRSRSKERKSKRSEIDKEKKPIKSPSKDASSGKENRSPSRRPGRSPKRRS 354

Query: 231 ASKKYLRRSAHSSARVLRSTSKDKSKTPNEPVSPLRSA--HSSPRVLRSTPKNKSQTPK 401
            S K   +S  S + +L      +SK+P+  +SP R A   S  R  R   + +  +P+
Sbjct: 355 LSPKLRDKSRRSRSPLLNDRRSKQSKSPSRTLSPGRRAKSRSLERKRREPERRRLSSPR 413

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>DSBB_HAEDU (Q7VKY2) Disulfide bond formation protein B (Disulfide|
           oxidoreductase)
          Length = 179

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -1

Query: 410 YLLFRCLALVFWGRSKHPGTTMSGSQWTY 324
           + LFR LALV WG S   G ++S   + Y
Sbjct: 67  FFLFRWLALVLWGFSAFKGLSLSIKHYDY 95

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>SON_MOUSE (Q9QX47) SON protein|
          Length = 2404

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
 Frame = +3

Query: 150  QENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRS-TSKDKSKTPNEPV 326
            ++N+K     S  P++  R    S+   S    RR + S +   RS T   +S+TP+   
Sbjct: 1897 RDNRKAARARSRTPSRRSRSHTPSRRRRSISVGRRRSFSISPSRRSRTPSRRSRTPSR-- 1954

Query: 327  SPLRSAHSSPRVLRSTPKNKSQTPKKQ 407
               RS   S R    TP  +S+TP ++
Sbjct: 1955 ---RSRTPSRR--SRTPSRRSRTPSRR 1976

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>TOP1_ARATH (P30181) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
          Length = 916

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +3

Query: 264 SSARVLRSTSKDKSKTPNEPVSPLRSAHSSPRVLRSTPKNKSQTPKKQV 410
           S++   +S S+     P   VSP+RS  +SP    +TP NK+   K  +
Sbjct: 34  SNSNQSKSNSQRSKAVPTTKVSPMRSPVTSPN--GTTPSNKTSIVKSSM 80

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>TTKA_DROME (P42282) Protein tramtrack, alpha isoform (Tramtrack p88)|
           (Repressor protein fushi tarazu)
          Length = 813

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 12/51 (23%), Positives = 26/51 (50%)
 Frame = +3

Query: 117 YMDKTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSS 269
           Y    + +   QE+      +++PP   + G+KG++    ++ +RR A S+
Sbjct: 531 YQGNEAEATPAQEDSPAAETATAPPPAPRSGKKGAKRPIQRRRVRRKAQST 581

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>LEM2_CAEEL (Q9XTB5) LEM protein 2 (Ce-MAN1) (MAN1 homolog)|
          Length = 500

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 19/60 (31%), Positives = 32/60 (53%)
 Frame = +3

Query: 234 SKKYLRRSAHSSARVLRSTSKDKSKTPNEPVSPLRSAHSSPRVLRSTPKNKSQTPKKQVN 413
           SK+   RSA+S+A  +    +  S TPN+ +SP+      P   ++TP+  S + K  +N
Sbjct: 127 SKQSSFRSANSTASSV-GRGRPVSSTPNKRLSPVYKPSPVP---KNTPRTTSSSSKTTIN 182

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>Y157_MYCPN (P75588) Hypothetical protein MG144 homolog (VXpSPT7_orf402)|
          Length = 402

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +3

Query: 282 RSTSKDKSKTPNEPVSPLRSAHSSPRVLRSTPKNKSQTPKKQV 410
           +  +KD  K P +P +P+++  +SP+V  +  K     P K V
Sbjct: 137 KDKNKDVKKEPAKPATPVKTEPTSPKVEPTKVKPPGGVPTKPV 179

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>SFRS6_HUMAN (Q13247) Splicing factor, arginine/serine-rich 6 (Pre-mRNA-splicing|
           factor SRP55)
          Length = 344

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 31/136 (22%), Positives = 55/136 (40%), Gaps = 29/136 (21%)
 Frame = +3

Query: 84  SRREGRSAVIIYMDKTSASGLVQENKKVGNDSSSPPTKGK-RGRKGSQITASKKYLRRSA 260
           SRR  RS         S S  + +++      S   ++ + +GRK    + SK    R +
Sbjct: 200 SRRRSRSRS--RRSSRSRSRSISKSRSRSRSRSKGRSRSRSKGRKSRSKSKSKPKSDRGS 257

Query: 261 HSSAR------VLRSTSKDKSKTPNE----------------------PVSPLRSAHSSP 356
           HS +R        +S S+ +S++P E                      PV P ++   SP
Sbjct: 258 HSHSRSRSKDEYEKSRSRSRSRSPKENGKGDIKSKSRSRSQSRSNSPLPVPPSKARSVSP 317

Query: 357 RVLRSTPKNKSQTPKK 404
              R+T +++S++  K
Sbjct: 318 PPKRATSRSRSRSRSK 333

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>DBP2_KLULA (Q6CIV2) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)|
          Length = 554

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 7/92 (7%)
 Frame = +3

Query: 66  QDWPISSRREGRSAVIIYMDKTSASGL-------VQENKKVGNDSSSPPTKGKRGRKGSQ 224
           +DW ++  R GRS +++  D  +A G+       V      GN        G+ GR GS 
Sbjct: 399 RDWVLAEFRSGRSPIMVATD-VAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGST 457

Query: 225 ITASKKYLRRSAHSSARVLRSTSKDKSKTPNE 320
            TA   +   +    A +++   + K   P E
Sbjct: 458 GTAISFFTEGNKSLGAALIKIMREAKQDIPEE 489

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>H12_ARATH (P26569) Histone H1.2|
          Length = 273

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 10/84 (11%)
 Frame = +3

Query: 189 PTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKSKT----------PNEPVSPLR 338
           P K K   KG++  A+K   +    +  +   + +K KSK+            +P +  R
Sbjct: 163 PAKAKAAAKGTKKPAAKVVAKAKVTAKPKAKVTAAKPKSKSVAAVSKTKAVAAKPKAKER 222

Query: 339 SAHSSPRVLRSTPKNKSQTPKKQV 410
            A +S    R++P  K   P K+V
Sbjct: 223 PAKASRTSTRTSPGKKVAAPAKKV 246


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,049,500
Number of Sequences: 219361
Number of extensions: 1520803
Number of successful extensions: 4285
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 4056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4261
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result