Clone Information

BLAST Search Result

Clone Name	bastl45f08
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	LRC8E_MOUSE (Q66JT1) Leucine-rich repeat-containing protein 8E	37	0.012
2	LRC8E_RAT (Q3KRC6) Leucine-rich repeat-containing protein 8E	37	0.015
3	LRC8E_HUMAN (Q6NSJ5) Leucine-rich repeat-containing protein 8E	35	0.034
4	SUPT3_HUMAN (O75486) Transcription initiation protein SPT3 homol...	34	0.098
5	IAA1_ORYSA (Q5VRD1) Auxin-responsive protein IAA1 (Indoleacetic ...	33	0.13
6	GLNE_MYCPA (Q73YJ1) Glutamate-ammonia-ligase adenylyltransferase...	32	0.37
7	MET_CALJA (Q2QLG5) Hepatocyte growth factor receptor precursor (...	32	0.49
8	VIV_ORYSA (P37398) Protein viviparous homolog	32	0.49
9	MET_MICMU (Q2QL89) Hepatocyte growth factor receptor precursor (...	31	0.63
10	MET_CALMO (Q2QLC0) Hepatocyte growth factor receptor precursor (...	31	0.63
11	MET_PONPY (Q2IBD8) Hepatocyte growth factor receptor precursor (...	31	0.83
12	MET_PANTR (Q2QLF1) Hepatocyte growth factor receptor precursor (...	31	0.83
13	MET_HUMAN (P08581) Hepatocyte growth factor receptor precursor (...	31	0.83
14	RSU1_MOUSE (Q01730) Ras suppressor protein 1 (Rsu-1) (RSP-1)	30	1.1
15	RSU1_HUMAN (Q15404) Ras suppressor protein 1 (Rsu-1) (RSP-1)	30	1.1
16	MET_RAT (P97523) Hepatocyte growth factor receptor precursor (EC...	30	1.1
17	MET_OTOGA (Q2QLH6) Hepatocyte growth factor receptor precursor (...	30	1.1
18	LAP4_DROME (Q7KRY7) Protein lap4 (Protein scribble) (Protein sme...	30	1.1
19	GLNE_MYCLE (Q9CBT4) Glutamate-ammonia-ligase adenylyltransferase...	30	1.4
20	ASF1_HELAN (P22357) Anther-specific protein SF18 precursor (Frag...	29	2.4
21	YNL5_CAEEL (Q21955) Hypothetical protein R12B2.5	29	2.4
22	VASP_BOVIN (Q2TA49) Vasodilator-stimulated phosphoprotein (VASP)	29	2.4
23	TAP_DROME (O16867) Basic helix-loop-helix neural transcription f...	29	2.4
24	RSSA_DAUCA (O80377) 40S ribosomal protein SA (p40)	29	2.4
25	DNL3_MOUSE (P97386) DNA ligase 3 (EC 6.5.1.1) (DNA ligase III) (...	29	2.4
26	RL10_BDEBA (Q6MJ05) 50S ribosomal protein L10	29	3.2
27	YHL1_EBV (P03181) Hypothetical protein BHLF1	29	3.2
28	GLNE_MYCTU (P69942) Glutamate-ammonia-ligase adenylyltransferase...	29	3.2
29	GLNE_MYCBO (P69941) Glutamate-ammonia-ligase adenylyltransferase...	29	3.2
30	INSM1_HUMAN (Q01101) Insulinoma-associated protein 1 (Zinc finge...	29	3.2
31	LRC57_XENLA (Q6INV3) Leucine-rich repeat-containing protein 57	28	4.1
32	LBXCO_HUMAN (P84550) Ladybird homeobox corepressor 1	28	4.1
33	NIT2_NEUCR (P19212) Nitrogen catabolic enzyme regulatory protein	28	4.1
34	GAS1_HUMAN (P54826) Growth-arrest-specific protein 1 precursor (...	28	4.1
35	UL52_HHV11 (P10236) DNA helicase/primase complex protein (DNA re...	28	5.4
36	COIA1_HUMAN (P39060) Collagen alpha-1(XVIII) chain precursor [Co...	28	7.0
37	LRC8C_RAT (Q498T9) Leucine-rich repeat-containing protein 8C	28	7.0
38	LRC8C_MOUSE (Q8R502) Leucine-rich repeat-containing protein 8C (...	28	7.0
39	MASS1_HUMAN (Q8WXG9) Monogenic audiogenic seizure susceptibility...	28	7.0
40	CYAA_PODAN (Q01513) Adenylate cyclase (EC 4.6.1.1) (ATP pyrophos...	28	7.0
41	ZN185_HUMAN (O15231) Zinc finger protein 185 (LIM-domain protein...	28	7.0
42	CF106_HUMAN (Q9H6K1) Protein C6orf106	28	7.0
43	SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains prote...	28	7.0
44	BAB2_DROME (Q9W0K4) Protein bric-a-brac 2	28	7.0
45	PHSH_ARATH (Q9SD76) Alpha-glucan phosphorylase, H isozyme (EC 2....	27	9.2
46	NIFA_AZOBR (P30667) Nif-specific regulatory protein	27	9.2
47	LRP3_HUMAN (O75074) Low-density lipoprotein receptor-related pro...	27	9.2
48	IE18_PRVIF (P11675) Immediate-early protein IE180	27	9.2
49	MET_CANFA (Q75ZY9) Hepatocyte growth factor receptor precursor (...	27	9.2
50	MAP1A_RAT (P34926) Microtubule-associated protein 1A (MAP 1A) [C...	27	9.2
51	LAP4_MOUSE (Q80U72) LAP4 protein (Scribble homolog protein)	27	9.2
52	CISY2_MYCTU (P63777) Putative citrate synthase 2 (EC 2.3.3.1)	27	9.2
53	CISY2_MYCBO (P63778) Putative citrate synthase 2 (EC 2.3.3.1)	27	9.2
54	YNB3_SCHPO (Q9USS7) Hypothetical protein C4.03c in chromosome II	27	9.2
55	M3K12_RAT (Q63796) Mitogen-activated protein kinase kinase kinas...	27	9.2
56	M3K12_MOUSE (Q60700) Mitogen-activated protein kinase kinase kin...	27	9.2

>LRC8E_MOUSE (Q66JT1) Leucine-rich repeat-containing protein 8E|
          Length = 795

 Score = 37.0 bits (84), Expect = 0.012
 Identities = 20/49 (40%), Positives = 26/49 (53%)
 Frame = +3

Query: 234 ELYIYRNAYNLVPRSIGECRGGLRALKFFGNDVEVLPPEAGDLDGLQSL 380
           +LY+  N    +P  +G+C G LR L    N +  LPPE G L  LQ L
Sbjct: 656 QLYLSHNKLETLPTQLGQCFG-LRLLDLSHNGLRSLPPELGLLQSLQHL 703

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>LRC8E_RAT (Q3KRC6) Leucine-rich repeat-containing protein 8E|
          Length = 795

 Score = 36.6 bits (83), Expect = 0.015
 Identities = 20/49 (40%), Positives = 26/49 (53%)
 Frame = +3

Query: 234 ELYIYRNAYNLVPRSIGECRGGLRALKFFGNDVEVLPPEAGDLDGLQSL 380
           +LY+  N    +P  +G+C G LR L    N +  LPPE G L  LQ L
Sbjct: 656 QLYLSHNKLETLPAQLGQCFG-LRLLDVSHNGLRSLPPELGLLQSLQHL 703

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>LRC8E_HUMAN (Q6NSJ5) Leucine-rich repeat-containing protein 8E|
          Length = 796

 Score = 35.4 bits (80), Expect = 0.034
 Identities = 20/49 (40%), Positives = 25/49 (51%)
 Frame = +3

Query: 234 ELYIYRNAYNLVPRSIGECRGGLRALKFFGNDVEVLPPEAGDLDGLQSL 380
           +LY+  N    +P  +G C  GLR L    N +  LPPE G L  LQ L
Sbjct: 657 QLYLSYNKLETLPSQLGLC-SGLRLLDVSHNGLHSLPPEVGLLQNLQHL 704

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>SUPT3_HUMAN (O75486) Transcription initiation protein SPT3 homolog (SPT3-like|
           protein)
          Length = 399

 Score = 33.9 bits (76), Expect = 0.098
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = +1

Query: 1   LFPVHTLSPPPTPYETLGRAAAGSP 75
           L  +HTLSPPP P+ ++ RAAA  P
Sbjct: 35  LSTLHTLSPPPRPFPSVSRAAAQKP 59

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>IAA1_ORYSA (Q5VRD1) Auxin-responsive protein IAA1 (Indoleacetic acid-induced|
           protein 1)
          Length = 199

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 19/42 (45%), Positives = 22/42 (52%)
 Frame = +3

Query: 96  GARMDPAAPDPDGGVLPPRGSDAADVAGNTWDLAPFSPPPAA 221
           G+    AAPDPD     P  SDAAD A N+  LA  +  P A
Sbjct: 31  GSLAAAAAPDPDRKRSSPSSSDAADAADNSSPLAAAADAPPA 72

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>GLNE_MYCPA (Q73YJ1) Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)|
           ([Glutamate--ammonia-ligase] adenylyltransferase)
           (Glutamine-synthetase adenylyltransferase) (ATase)
          Length = 998

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = +3

Query: 117 APDPDGGVLPPRGSDAADVAGNTWDLAPFSPPPAALR 227
           APDPDGG+L  R    A +AG +W L+     PA  R
Sbjct: 554 APDPDGGLLAYRRLSEA-LAGESWYLSTLRDKPAVAR 589

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>MET_CALJA (Q2QLG5) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
           (HGF receptor) (Scatter factor receptor) (SF receptor)
           (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
           (c-Met)
          Length = 1381

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 14/26 (53%), Positives = 20/26 (76%)
 Frame = -1

Query: 367 PSRSPASGGSTSTSLPKNLSALSPPR 290
           P++S  SGGST T + KNL+++S PR
Sbjct: 749 PTKSFVSGGSTITGIGKNLNSVSVPR 774

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>VIV_ORYSA (P37398) Protein viviparous homolog|
          Length = 728

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 18/54 (33%), Positives = 21/54 (38%), Gaps = 3/54 (5%)
 Frame = +3

Query: 90  DGGARMDPAAPDPD---GGVLPPRGSDAADVAGNTWDLAPFSPPPAALRGGELY 242
           DG A  DP  P P    G   P  G +    A  +W       PPAA  G  +Y
Sbjct: 256 DGAASSDPQLPSPGANPGYEFPSGGQEMGSAAATSWMPYQAFTPPAAYGGDAMY 309

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>MET_MICMU (Q2QL89) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
           (HGF receptor) (Scatter factor receptor) (SF receptor)
           (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
           (c-Met)
          Length = 1382

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 14/26 (53%), Positives = 20/26 (76%)
 Frame = -1

Query: 367 PSRSPASGGSTSTSLPKNLSALSPPR 290
           P++S  SGGST T + KNL+++S PR
Sbjct: 750 PTKSFVSGGSTITGVGKNLNSVSVPR 775

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>MET_CALMO (Q2QLC0) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
           (HGF receptor) (Scatter factor receptor) (SF receptor)
           (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
           (c-Met)
          Length = 1381

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 14/26 (53%), Positives = 20/26 (76%)
 Frame = -1

Query: 367 PSRSPASGGSTSTSLPKNLSALSPPR 290
           P++S  SGGST T + KNL+++S PR
Sbjct: 749 PTKSFISGGSTITGIGKNLNSVSVPR 774

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>MET_PONPY (Q2IBD8) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
           (HGF receptor) (Scatter factor receptor) (SF receptor)
           (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
           (c-Met)
          Length = 1390

 Score = 30.8 bits (68), Expect = 0.83
 Identities = 14/26 (53%), Positives = 20/26 (76%)
 Frame = -1

Query: 367 PSRSPASGGSTSTSLPKNLSALSPPR 290
           P++S  SGGST T + KNL+++S PR
Sbjct: 749 PTKSFISGGSTITGVGKNLNSVSVPR 774

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>MET_PANTR (Q2QLF1) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
           (HGF receptor) (Scatter factor receptor) (SF receptor)
           (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
           (c-Met)
          Length = 1390

 Score = 30.8 bits (68), Expect = 0.83
 Identities = 14/26 (53%), Positives = 20/26 (76%)
 Frame = -1

Query: 367 PSRSPASGGSTSTSLPKNLSALSPPR 290
           P++S  SGGST T + KNL+++S PR
Sbjct: 749 PTKSFISGGSTITGVGKNLNSVSVPR 774

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>MET_HUMAN (P08581) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
           (HGF receptor) (Scatter factor receptor) (SF receptor)
           (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
           (c-Met)
          Length = 1390

 Score = 30.8 bits (68), Expect = 0.83
 Identities = 14/26 (53%), Positives = 20/26 (76%)
 Frame = -1

Query: 367 PSRSPASGGSTSTSLPKNLSALSPPR 290
           P++S  SGGST T + KNL+++S PR
Sbjct: 749 PTKSFISGGSTITGVGKNLNSVSVPR 774

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>RSU1_MOUSE (Q01730) Ras suppressor protein 1 (Rsu-1) (RSP-1)|
          Length = 276

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 15/27 (55%), Positives = 17/27 (62%)
 Frame = +3

Query: 300 LRALKFFGNDVEVLPPEAGDLDGLQSL 380
           LRAL    ND E+LPP+ G L  LQ L
Sbjct: 135 LRALYLSDNDFEILPPDIGKLTKLQIL 161



 Score = 28.9 bits (63), Expect = 3.2
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = +3

Query: 237 LYIYRNAYNLVPRSIGECRGGLRALKFFGNDVEVLPPEAGDLDGLQSL 380
           LY+  N + ++P  IG+    L+ L    ND+  LP E G+L  L+ L
Sbjct: 138 LYLSDNDFEILPPDIGKLTK-LQILSLRDNDLISLPKEIGELTQLKEL 184

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>RSU1_HUMAN (Q15404) Ras suppressor protein 1 (Rsu-1) (RSP-1)|
          Length = 276

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 15/27 (55%), Positives = 17/27 (62%)
 Frame = +3

Query: 300 LRALKFFGNDVEVLPPEAGDLDGLQSL 380
           LRAL    ND E+LPP+ G L  LQ L
Sbjct: 135 LRALYLSDNDFEILPPDIGKLTKLQIL 161



 Score = 28.9 bits (63), Expect = 3.2
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = +3

Query: 237 LYIYRNAYNLVPRSIGECRGGLRALKFFGNDVEVLPPEAGDLDGLQSL 380
           LY+  N + ++P  IG+    L+ L    ND+  LP E G+L  L+ L
Sbjct: 138 LYLSDNDFEILPPDIGKLTK-LQILSLRDNDLISLPKEIGELTQLKEL 184

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>MET_RAT (P97523) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
           (HGF receptor) (Scatter factor receptor) (SF receptor)
           (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
           (c-Met)
          Length = 1382

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 13/26 (50%), Positives = 20/26 (76%)
 Frame = -1

Query: 367 PSRSPASGGSTSTSLPKNLSALSPPR 290
           P++S  SGGST T + KNL+++S P+
Sbjct: 750 PTKSFISGGSTITGIGKNLNSVSTPK 775

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>MET_OTOGA (Q2QLH6) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
           (HGF receptor) (Scatter factor receptor) (SF receptor)
           (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
           (c-Met)
          Length = 1382

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = -1

Query: 367 PSRSPASGGSTSTSLPKNLSALSPPR 290
           P +S  SGGST T + KNL+++S PR
Sbjct: 750 PMKSFVSGGSTITGVGKNLNSVSVPR 775

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>LAP4_DROME (Q7KRY7) Protein lap4 (Protein scribble) (Protein smell-impaired)|
          Length = 1851

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = +3

Query: 237 LYIYRNAYNLVPRSIGECRGGLRALKFFGNDVEVLPPEAGDLDGLQSL 380
           L + RNA   +P  IG+C   L  L    N ++ LPPE G+   L  L
Sbjct: 318 LNVDRNALEYLPLEIGQC-ANLGVLSLRDNKLKKLPPELGNCTVLHVL 364

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>GLNE_MYCLE (Q9CBT4) Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)|
           ([Glutamate--ammonia-ligase] adenylyltransferase)
           (Glutamine-synthetase adenylyltransferase) (ATase)
          Length = 1004

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +3

Query: 117 APDPDGGVLPPRGSDAADVAGNTWDLAPFSPPPAALR 227
           APDPDGG+L  R    A ++  TW L+     PA  R
Sbjct: 564 APDPDGGLLAYRRLSEA-LSAETWYLSTLRDKPAVAR 599

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>ASF1_HELAN (P22357) Anther-specific protein SF18 precursor (Fragment)|
          Length = 161

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 18/47 (38%), Positives = 18/47 (38%)
 Frame = +3

Query: 93  GGARMDPAAPDPDGGVLPPRGSDAADVAGNTWDLAPFSPPPAALRGG 233
           GG    PA  D  GG  PP G D    A          PPPA   GG
Sbjct: 118 GGGSPPPAGGDGGGGAPPPAGGDGGGGA----------PPPAGGDGG 154

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>YNL5_CAEEL (Q21955) Hypothetical protein R12B2.5|
          Length = 780

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +3

Query: 99  ARMDPAAPDPDGGVLPPRGSDAADVAGNTWDLAPFSPPPAALRGG 233
           A   P+AP+P GG+  P  S  A VA     +A F  P  ++R G
Sbjct: 134 ASTTPSAPNPPGGLPAPSASATAAVAA---AVASFPSPDTSIRPG 175

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>VASP_BOVIN (Q2TA49) Vasodilator-stimulated phosphoprotein (VASP)|
          Length = 382

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 18/45 (40%), Positives = 21/45 (46%)
 Frame = +3

Query: 84  AADGGARMDPAAPDPDGGVLPPRGSDAADVAGNTWDLAPFSPPPA 218
           AA  GA   P  P P  G  PP G  ++ V+  T   A   PPPA
Sbjct: 166 AASAGAPPPPPGPPPPPGPPPPPGLSSSGVSAATQG-AGGGPPPA 209

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>TAP_DROME (O16867) Basic helix-loop-helix neural transcription factor TAP|
           (Target of Poxn protein) (Protein biparous)
          Length = 398

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +3

Query: 144 PPRGSDAADVAGNTWDLAPFSPPPAALRG 230
           PP  +     +G TWD  P S PPA   G
Sbjct: 51  PPTPAIPQPYSGGTWDAVPLSSPPAGFVG 79

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>RSSA_DAUCA (O80377) 40S ribosomal protein SA (p40)|
          Length = 297

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 10/54 (18%)
 Frame = +3

Query: 93  GGARMDPAAPDPD--GGVLPPRGS--------DAADVAGNTWDLAPFSPPPAAL 224
           GGA    A PD    G V+ P  S        DA  +AG+ WD A   P P A+
Sbjct: 233 GGADQWNAIPDAQWGGDVVQPANSAVPAGTWTDAGPIAGDGWDAAAAPPVPGAV 286

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>DNL3_MOUSE (P97386) DNA ligase 3 (EC 6.5.1.1) (DNA ligase III)|
           (Polydeoxyribonucleotide synthase [ATP] 3)
          Length = 1015

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = -1

Query: 367 PSRSPASGGSTSTSL--PKNLSALSP-PRHSPMERGTRL 260
           PS+S AS  +T   L  P +   + P P+HSPM+ G +L
Sbjct: 876 PSKSSASAKTTEQKLNSPSSRGGIKPIPKHSPMKPGEKL 914

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>RL10_BDEBA (Q6MJ05) 50S ribosomal protein L10|
          Length = 182

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +3

Query: 261 NLVPRSIGECRGGLRALKFFGNDVEVLPPEAGDLDG 368
           N +  S GE     +AL  F  DVEVL  ++G +DG
Sbjct: 87  NAIVFSYGEVNATAKALADFAKDVEVLQIKSGVMDG 122

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>YHL1_EBV (P03181) Hypothetical protein BHLF1|
          Length = 660

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 17/42 (40%), Positives = 19/42 (45%)
 Frame = +3

Query: 96  GARMDPAAPDPDGGVLPPRGSDAADVAGNTWDLAPFSPPPAA 221
           GA   PAAP P GG   P G+      G+     P  PP AA
Sbjct: 565 GAPGTPAAPGPGGGAAVPSGATPHPERGS----GPADPPAAA 602



 Score = 28.9 bits (63), Expect = 3.2
 Identities = 17/42 (40%), Positives = 19/42 (45%)
 Frame = +3

Query: 96  GARMDPAAPDPDGGVLPPRGSDAADVAGNTWDLAPFSPPPAA 221
           GA   PAAP P GG   P G+      G+     P  PP AA
Sbjct: 440 GAPGTPAAPGPGGGAAVPSGATPHPERGS----GPADPPAAA 477



 Score = 28.9 bits (63), Expect = 3.2
 Identities = 17/42 (40%), Positives = 19/42 (45%)
 Frame = +3

Query: 96  GARMDPAAPDPDGGVLPPRGSDAADVAGNTWDLAPFSPPPAA 221
           GA   PAAP P GG   P G+      G+     P  PP AA
Sbjct: 315 GAPGTPAAPGPGGGAAVPSGATPHPERGS----GPADPPAAA 352



 Score = 28.9 bits (63), Expect = 3.2
 Identities = 17/42 (40%), Positives = 19/42 (45%)
 Frame = +3

Query: 96  GARMDPAAPDPDGGVLPPRGSDAADVAGNTWDLAPFSPPPAA 221
           GA   PAAP P GG   P G+      G+     P  PP AA
Sbjct: 190 GAPGTPAAPGPGGGAAVPSGATPHPERGS----GPADPPAAA 227

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>GLNE_MYCTU (P69942) Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)|
           ([Glutamate--ammonia-ligase] adenylyltransferase)
           (Glutamine-synthetase adenylyltransferase) (ATase)
          Length = 994

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +3

Query: 117 APDPDGGVLPPRGSDAADVAGNTWDLAPFSPPPAALR 227
           APDPDGG+L  R    A +A  +W LA     PA  +
Sbjct: 554 APDPDGGLLAYRRLSEA-LATESWYLATLRDKPAVAK 589

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>GLNE_MYCBO (P69941) Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)|
           ([Glutamate--ammonia-ligase] adenylyltransferase)
           (Glutamine-synthetase adenylyltransferase) (ATase)
          Length = 994

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +3

Query: 117 APDPDGGVLPPRGSDAADVAGNTWDLAPFSPPPAALR 227
           APDPDGG+L  R    A +A  +W LA     PA  +
Sbjct: 554 APDPDGGLLAYRRLSEA-LATESWYLATLRDKPAVAK 589

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>INSM1_HUMAN (Q01101) Insulinoma-associated protein 1 (Zinc finger protein IA-1)|
          Length = 510

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +3

Query: 93  GGARMDPAAPDPDGGVLPP 149
           GGAR +P AP P  G LPP
Sbjct: 37  GGARAEPPAPSPVPGPLPP 55

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>LRC57_XENLA (Q6INV3) Leucine-rich repeat-containing protein 57|
          Length = 238

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 270 PRSIGECRGGLRALKFFGNDVEVLPPEAGDLDGLQSL 380
           P  +    G LR +    N +EV+PP  G    L+SL
Sbjct: 30  PEDLQRLSGNLRTIDLSSNKIEVVPPMMGKFSLLKSL 66

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>LBXCO_HUMAN (P84550) Ladybird homeobox corepressor 1|
          Length = 965

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -1

Query: 364 SRSPASGGSTSTSLPKNLSALSPPRHSPMERGTRLYALR 248
           SR P     T  +LP  L+ L PP   P  +G+ + A R
Sbjct: 558 SRGPLDEDGTDEALPPPLAPLPPPPPPPARKGSYVSAFR 596

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>NIT2_NEUCR (P19212) Nitrogen catabolic enzyme regulatory protein|
          Length = 1036

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 20/55 (36%), Positives = 28/55 (50%)
 Frame = -1

Query: 370  SPSRSPASGGSTSTSLPKNLSALSPPRHSPMERGTRLYALR*M*SSPPRSAAGGG 206
            SP+  PASGG+T+ S P +    S    S    G  +  +    S+PP+SA G G
Sbjct: 856  SPASGPASGGNTAGSTPTSYHG-STGSTSGAVGGKSVIPIA---SAPPKSAPGPG 906

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>GAS1_HUMAN (P54826) Growth-arrest-specific protein 1 precursor (GAS-1)|
          Length = 345

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 19/56 (33%), Positives = 24/56 (42%)
 Frame = +3

Query: 93  GGARMDPAAPDPDGGVLPPRGSDAADVAGNTWDLAPFSPPPAALRGGELYIYRNAY 260
           GGA  +    D DG   PPR    A  +G   DL P+ P   +  GG     R A+
Sbjct: 276 GGAGGEQPLDDDDGVPHPPRPGSGAAASGGRGDL-PYGPGRRSSGGGGRLAPRGAW 330

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>UL52_HHV11 (P10236) DNA helicase/primase complex protein (DNA replication|
           protein UL52)
          Length = 1058

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 17/47 (36%), Positives = 21/47 (44%)
 Frame = +3

Query: 114 AAPDPDGGVLPPRGSDAADVAGNTWDLAPFSPPPAALRGGELYIYRN 254
           AA  PD G L  R +D     G      P  PP     GG++Y+ RN
Sbjct: 573 AAAHPDHGALGRRLTDRIRAQG------PVMPPGGLDAGGQMYVNRN 613

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>COIA1_HUMAN (P39060) Collagen alpha-1(XVIII) chain precursor [Contains:|
           Endostatin]
          Length = 1516

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = -1

Query: 379 RLWS---PSRSPASGGSTSTSLPKNLSALSPPRHSPMERGTRLYALR*M*SSP 230
           +LW+   P+ S A   +     P    AL+ P  +P E GT L+  R + SSP
Sbjct: 126 QLWNDTVPTESLARAETLVLETPVGPLALAGPSSTPQENGTTLWPSRGIPSSP 178

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>LRC8C_RAT (Q498T9) Leucine-rich repeat-containing protein 8C|
          Length = 803

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +3

Query: 237 LYIYRNAYNLVPRSIGECRGGLRALKFFGNDVEVLPPEAGDLDGLQ 374
           L+   N   ++P  +  C   +R L    ND+  +PPE G L  LQ
Sbjct: 665 LFFSHNKVEVLPSHLFLCNK-IRYLDLSYNDIRFIPPEIGVLQSLQ 709



 Score = 27.3 bits (59), Expect = 9.2
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = +3

Query: 237 LYIYRNAYNLVPRSIGECRGGLRALKFFGNDVEVLPPEAGDLDGLQ 374
           L I +N+ +++   IG     L  L   GN  EVLPPE GD   L+
Sbjct: 734 LKIGKNSLSVLSPKIGNLLF-LSYLDIKGNHFEVLPPELGDCRALK 778

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>LRC8C_MOUSE (Q8R502) Leucine-rich repeat-containing protein 8C (Protein AD158)|
          Length = 803

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +3

Query: 237 LYIYRNAYNLVPRSIGECRGGLRALKFFGNDVEVLPPEAGDLDGLQ 374
           L+   N   ++P  +  C   +R L    ND+  +PPE G L  LQ
Sbjct: 665 LFFSHNKVEVLPSHLFLCNK-IRYLDLSYNDIRFIPPEIGVLQSLQ 709



 Score = 27.3 bits (59), Expect = 9.2
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = +3

Query: 237 LYIYRNAYNLVPRSIGECRGGLRALKFFGNDVEVLPPEAGDLDGLQ 374
           L I +N+ +++   IG     L  L   GN  EVLPPE GD   L+
Sbjct: 734 LKIGKNSLSVLSPKIGNLLF-LSYLDIKGNHFEVLPPELGDCRALK 778

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>MASS1_HUMAN (Q8WXG9) Monogenic audiogenic seizure susceptibility protein 1|
            homolog precursor (Very large G-protein coupled receptor
            1) (Usher syndrome type-2C protein) (G-protein coupled
            receptor 98)
          Length = 6307

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 12/83 (14%)
 Frame = +3

Query: 168  DVAGNTWDLAPFSPPPAALRGGE---LYIYRNAYNLV---------PRSIGECRGGLRAL 311
            D  G  ++ +P S  P  ++ GE   L+I R+  +LV         PR   E  G    L
Sbjct: 770  DDPGGVFEFSPASRGPYVIKEGESVELHIIRSRGSLVKQFLHYRVEPRDSNEFYGNTGVL 829

Query: 312  KFFGNDVEVLPPEAGDLDGLQSL 380
            +F   + E++      LDG+  L
Sbjct: 830  EFKPGEREIVITLLARLDGIPEL 852

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>CYAA_PODAN (Q01513) Adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase)|
           (Adenylyl cyclase)
          Length = 2145

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 19/63 (30%), Positives = 25/63 (39%)
 Frame = +3

Query: 168 DVAGNTWDLAPFSPPPAALRGGELYIYRNAYNLVPRSIGECRGGLRALKFFGNDVEVLPP 347
           D++G +    P    P A     L + RN    VPR        LR +KF  N+   LP 
Sbjct: 760 DLSGRSLSAIPVQLYPRANEIISLNLSRNLSLQVPRDFISVCPNLRDIKFNNNEARALPK 819

Query: 348 EAG 356
             G
Sbjct: 820 SFG 822

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>ZN185_HUMAN (O15231) Zinc finger protein 185 (LIM-domain protein ZNF185) (P1-A)|
          Length = 457

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 15/46 (32%), Positives = 19/46 (41%)
 Frame = +3

Query: 99  ARMDPAAPDPDGGVLPPRGSDAADVAGNTWDLAPFSPPPAALRGGE 236
           A  + A  DP G +    G D A   G  W   P +P     RGG+
Sbjct: 160 AAQEDAKADPKGALADYEGKDVATRVGEAWQERPGAP-----RGGQ 200

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>CF106_HUMAN (Q9H6K1) Protein C6orf106|
          Length = 298

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +3

Query: 147 PRGSDAADVAGNTWDLAP--FSPPPAALRGGELYIYRNAYNLVPRS 278
           P GS+   ++ NTW  AP  ++P P      +  + +N+ NL P S
Sbjct: 230 PGGSEFDSISKNTWAPAPDTWAPAPDQTEQDQNRLSQNSVNLSPSS 275

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>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)|
           (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon)
           (Somatostatin receptor-interacting protein)
           (SSTR-interacting protein) (SSTRIP)
          Length = 2167

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 20/59 (33%), Positives = 24/59 (40%)
 Frame = -1

Query: 370 SPSRSPASGGSTSTSLPKNLSALSPPRHSPMERGTRLYALR*M*SSPPRSAAGGGEKGA 194
           +PS   +SG   S S P+   A SP R    E   R    R   S  PR    GG  G+
Sbjct: 476 APSTKLSSGTLRSASSPRGARARSPSRGRHPEDAKRQPRGRPSSSGTPRDGPAGGTGGS 534

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>BAB2_DROME (Q9W0K4) Protein bric-a-brac 2|
          Length = 1067

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
 Frame = -1

Query: 358 SPASGGSTSTSLPKNLSALSPPRHSPMERGTRLYALR-------*M*SSPPRSAAGGGEK 200
           SP  G +  ++LP +++A+ PP  S M    +  A +        M S+   +AAG G  
Sbjct: 468 SPPGGVAVQSALPPHMAAIVPPPPSAMHHHAQQLAAQHQLAHSHAMASALAAAAAGAGAA 527

Query: 199 GA 194
           GA
Sbjct: 528 GA 529

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>PHSH_ARATH (Q9SD76) Alpha-glucan phosphorylase, H isozyme (EC 2.4.1.1) (Starch|
           phosphorylase H)
          Length = 841

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
 Frame = +3

Query: 87  ADGGARMDPAAPDPDGGVLPPRGSDAADVAGNTWDLAPFSPPPAALR-GGELYIYRNAYN 263
           A+   +   + P+       P   DA ++AGN    A +SP  + L+ G E  +Y  A +
Sbjct: 2   ANANGKAATSLPEKISAKANPEADDATEIAGNIVYHAKYSPHFSPLKFGPEQALYATAES 61

Query: 264 LVPRSI 281
           L  R I
Sbjct: 62  LRDRLI 67

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>NIFA_AZOBR (P30667) Nif-specific regulatory protein|
          Length = 625

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 16/45 (35%), Positives = 19/45 (42%)
 Frame = +3

Query: 87  ADGGARMDPAAPDPDGGVLPPRGSDAADVAGNTWDLAPFSPPPAA 221
           A G    DPA P P    LPP+    +  A         +PPPAA
Sbjct: 535 AGGSGPPDPACPCPSRAPLPPQAPPPSPAA---------APPPAA 570

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>LRP3_HUMAN (O75074) Low-density lipoprotein receptor-related protein 3|
           precursor (hLRp105)
          Length = 770

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
 Frame = +3

Query: 96  GARMDPAAPDPDGGVLPPRGSDAADVAGNTWDLAPFSPP-PAALRGGE 236
           GA  DP AP  D G     G       G   ++ P  PP P+ LR  E
Sbjct: 645 GAAPDPPAPLMDTGSTRAAGDRPPSAPGRAPEVGPSGPPLPSGLRDPE 692

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>IE18_PRVIF (P11675) Immediate-early protein IE180|
          Length = 1461

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 15/48 (31%), Positives = 20/48 (41%)
 Frame = +3

Query: 186  WDLAPFSPPPAALRGGELYIYRNAYNLVPRSIGECRGGLRALKFFGND 329
            WD APF     A  GG +  +R +    P   GE    +  + F G D
Sbjct: 1382 WDFAPFETSVRAAAGGAVETHRPSGARGPGEDGEDSAAVEIVGFRGGD 1429

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>MET_CANFA (Q75ZY9) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
           (HGF receptor) (Scatter factor receptor) (SF receptor)
           (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
           (c-Met)
          Length = 1382

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/23 (52%), Positives = 19/23 (82%)
 Frame = -1

Query: 367 PSRSPASGGSTSTSLPKNLSALS 299
           P++S  SGGST T++ KNL+++S
Sbjct: 750 PTKSFISGGSTITAVGKNLNSVS 772

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>MAP1A_RAT (P34926) Microtubule-associated protein 1A (MAP 1A) [Contains: MAP1|
            light chain LC2]
          Length = 2774

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 153  GSDAADVAGNTWDLAPFSPPPAA 221
            GS     A + WDL P SP P+A
Sbjct: 2259 GSGKESAAHSLWDLTPLSPAPSA 2281

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>LAP4_MOUSE (Q80U72) LAP4 protein (Scribble homolog protein)|
          Length = 1612

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 18/49 (36%), Positives = 23/49 (46%)
 Frame = +3

Query: 234 ELYIYRNAYNLVPRSIGECRGGLRALKFFGNDVEVLPPEAGDLDGLQSL 380
           EL +  N    +P S+G+    L  L    N +EVLPPE G    L  L
Sbjct: 293 ELILTENLLTALPHSLGKLTK-LTNLNVDRNHLEVLPPEIGGCVALSVL 340

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>CISY2_MYCTU (P63777) Putative citrate synthase 2 (EC 2.3.3.1)|
          Length = 373

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 16/60 (26%)
 Frame = +3

Query: 114 AAPDPDGGVLPPRGSDAADVA------GNTW----------DLAPFSPPPAALRGGELYI 245
           A PD DGG L  RG D  D+       G+ W           L P  P P  +  G++ +
Sbjct: 23  AEPDKDGGALRYRGVDIEDLVSQRVTFGDVWALLVDGNFGSGLPPAEPFPLPIHSGDVRV 82

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>CISY2_MYCBO (P63778) Putative citrate synthase 2 (EC 2.3.3.1)|
          Length = 373

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 16/60 (26%)
 Frame = +3

Query: 114 AAPDPDGGVLPPRGSDAADVA------GNTW----------DLAPFSPPPAALRGGELYI 245
           A PD DGG L  RG D  D+       G+ W           L P  P P  +  G++ +
Sbjct: 23  AEPDKDGGALRYRGVDIEDLVSQRVTFGDVWALLVDGNFGSGLPPAEPFPLPIHSGDVRV 82

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>YNB3_SCHPO (Q9USS7) Hypothetical protein C4.03c in chromosome II|
          Length = 891

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 22/77 (28%)
 Frame = +3

Query: 216 AALRGGELYIYRN-------------AYNLVPRSIG-------ECRGGLRALKFFGNDVE 335
           A L GG++Y Y N              +  V R  G        C  GLR  K+ GN ++
Sbjct: 496 ATLSGGQIYHYSNFVADRDGSRLKQDLFRSVTREQGYRVMLKTRCSNGLRVSKYLGNFLQ 555

Query: 336 VLPP--EAGDLDGLQSL 380
             P   E G LD  +S+
Sbjct: 556 RTPQDIEFGSLDADKSV 572

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>M3K12_RAT (Q63796) Mitogen-activated protein kinase kinase kinase 12 (EC|
           2.7.11.25) (Mixed lineage kinase) (Leucine-zipper
           protein kinase) (ZPK) (Dual leucine zipper bearing
           kinase) (DLK) (MAPK-upstream kinase) (MUK)
          Length = 888

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 15/43 (34%), Positives = 19/43 (44%)
 Frame = +3

Query: 87  ADGGARMDPAAPDPDGGVLPPRGSDAADVAGNTWDLAPFSPPP 215
           A GGAR   + P P G   P  GS     + ++   A   PPP
Sbjct: 658 ATGGARDPGSPPPPQGDTPPSEGSAPGSTSPDSPGGAKGEPPP 700

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>M3K12_MOUSE (Q60700) Mitogen-activated protein kinase kinase kinase 12 (EC|
           2.7.11.25) (Mixed lineage kinase) (Leucine-zipper
           protein kinase) (ZPK) (Dual leucine zipper bearing
           kinase) (DLK) (MAPK-upstream kinase) (MUK)
          Length = 888

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 15/43 (34%), Positives = 19/43 (44%)
 Frame = +3

Query: 87  ADGGARMDPAAPDPDGGVLPPRGSDAADVAGNTWDLAPFSPPP 215
           A GGAR   + P P G   P  GS     + ++   A   PPP
Sbjct: 658 ATGGARDPGSPPPPQGDTPPSEGSAPGSTSPDSPGGAKGEPPP 700


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.135    0.458 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,936,969
Number of Sequences: 219361
Number of extensions: 678791
Number of successful extensions: 2155
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 2015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2146
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 1396778976
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result