Clone Name | bastl45f07 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | MERA_SHIFL (P08332) Mercuric reductase (EC 1.16.1.1) (Hg(II) red... | 32 | 0.68 | 2 | STAG1_XENLA (Q9DGN1) Cohesin subunit SA-1 (xSA-1) (Stromal antig... | 28 | 9.9 | 3 | ODO2_MOUSE (Q9D2G2) Dihydrolipoyllysine-residue succinyltransfer... | 28 | 9.9 |
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>MERA_SHIFL (P08332) Mercuric reductase (EC 1.16.1.1) (Hg(II) reductase)| Length = 564 Score = 32.0 bits (71), Expect = 0.68 Identities = 15/30 (50%), Positives = 20/30 (66%) Frame = -2 Query: 348 LRNRILSLLGENDKTGSGGASTMSCISLGG 259 L +++ LLG NDKTGS GA ++ I GG Sbjct: 78 LLDKMRDLLGRNDKTGSSGALHIAVIGSGG 107
>STAG1_XENLA (Q9DGN1) Cohesin subunit SA-1 (xSA-1) (Stromal antigen 1 homolog)| (SCC3 homolog 1) Length = 1265 Score = 28.1 bits (61), Expect = 9.9 Identities = 11/33 (33%), Positives = 20/33 (60%) Frame = -2 Query: 105 ERPRKTRGAKGSAQGREREQGESEASPVEDGKG 7 ++PRKT G + A+ R +G + P ++G+G Sbjct: 57 KKPRKTPGDRSRAEPGSRGRGRANGHPQQNGEG 89
>ODO2_MOUSE (Q9D2G2) Dihydrolipoyllysine-residue succinyltransferase component| of 2-oxoglutarate dehydrogenase complex, mitochondrial precursor (EC 2.3.1.61) (Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex) (E2) (E2 Length = 454 Score = 28.1 bits (61), Expect = 9.9 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = +2 Query: 260 PPKEIQDIVDAPPLPVLSFSPSKDKILFLKRRALPPLSD 376 PP + PP+P S PS + +K A PPL++ Sbjct: 175 PPPAAPVLTQMPPVPSPSQPPSSKPVSAIKPTAAPPLAE 213 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,460,490 Number of Sequences: 219361 Number of extensions: 686254 Number of successful extensions: 2416 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2334 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2414 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)