ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl45f07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 155 1e-34
2gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare str... 155 1e-34
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 155 1e-34
4dbj|AK102205.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 1e-34
5dbj|AB046401.1| Oryza sativa (indica cultivar-group) OsNAS1, OsN... 155 1e-34
6dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 44 0.38
7gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
8gb|AC138232.10| Mus musculus chromosome 1, clone RP23-39C19, com... 42 1.5
9gb|AC130729.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
10gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
11gb|AC160132.2| Mus musculus BAC clone RP23-197I12 from chromosom... 42 1.5
12dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
13gb|AC157586.2| Mus musculus BAC clone RP24-406D13 from chromosom... 42 1.5
14gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 42 1.5
15gb|AC113507.12| Mus musculus chromosome 3, clone RP23-376O10, co... 42 1.5
16ref|XM_476726.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.9
17gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 5.9
18gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome 40 5.9
19gb|AC132335.3| Mus musculus BAC clone RP24-230C24 from chromosom... 40 5.9
20gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 40 5.9
21ref|NM_194449.1| Homo sapiens PH domain and leucine rich repeat ... 40 5.9
22ref|XM_538506.2| PREDICTED: Canis familiaris hypothetical LOC481... 40 5.9
23gb|BC014927.2| Homo sapiens pleckstrin homology domain containin... 40 5.9
24emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome... 40 5.9
25gb|BC047653.1| Homo sapiens PH domain and leucine rich repeat pr... 40 5.9
26emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 5.9
27emb|AL731635.3|OSJN00277 Oryza sativa genomic DNA, chromosome 4,... 40 5.9
28emb|AL731627.3|OSJN00272 Oryza sativa genomic DNA, chromosome 4,... 40 5.9
29dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 40 5.9
30gb|AC027553.6| Homo sapiens, clone RP11-53O13, complete sequence 40 5.9
31dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
32gb|AF533985.1| Streptomyces sp. EN27 plasmid pEN2701, complete s... 40 5.9
33dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
34dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
35gb|BC063519.1| Homo sapiens PH domain and leucine rich repeat pr... 40 5.9
36gb|BC010706.1| Homo sapiens PH domain and leucine rich repeat pr... 40 5.9
37gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.9
38gb|AC021299.17| Homo sapiens chromosome 18, clone RP11-159K14, c... 40 5.9
39dbj|AP002485.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
40dbj|AP003842.5| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
41dbj|AP004267.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
42gb|AC166165.3| Mus musculus BAC clone RP23-381I17 from chromosom... 40 5.9
43emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chro... 40 5.9
44emb|AL953859.7| Zebrafish DNA sequence from clone DKEY-53P21, co... 40 5.9
45gb|BC050272.1| Homo sapiens zinc finger, DHHC-type containing 2,... 40 5.9
46gb|U19817.1|AGU19817 Arthrobacter globiformis 3,4-dihydroxypheny... 40 5.9
47emb|AL772145.9| Mouse DNA sequence from clone RP23-212H4 on chro... 40 5.9
48dbj|AB011178.2| Homo sapiens mRNA for KIAA0606 protein, partial cds 40 5.9 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  155 bits (78), Expect = 1e-34
 Identities = 164/193 (84%)
 Strand = Plus / Plus

                                                                            
Query: 246      tgggctaccgccttccccccaaagaaatacaggacattgttgatgcaccaccacttcctg 305
                |||||||||||||||| || ||||||||||| ||||| |||||||||||||| || || |
Sbjct: 10890928 tgggctaccgccttcctccaaaagaaatacaagacatcgttgatgcaccaccgctacccg 10890987

                                                                            
Query: 306      ttttgtcgttctcaccaagcaaagacaagattctgtttctcaaacgtcgagcgcttccac 365
                |  | || ||||| |||||||| ||||||||| | || || || || ||||| || ||||
Sbjct: 10890988 tgctatcattctcgccaagcaaggacaagattttattcctgaagcgccgagcactgccac 10891047

                                                                            
Query: 366      cactatctgatctcgcanagcctgaggagaaacttgctggtgtgaggattgatggccatt 425
                || | || ||||||||| ||||||| |||||||||||||||||||| ||||||||| |||
Sbjct: 10891048 cattgtcggatctcgcaaagcctgaagagaaacttgctggtgtgagaattgatggctatt 10891107

                             
Query: 426      ctaacactagaag 438
                |||| ||||||||
Sbjct: 10891108 ctaatactagaag 10891120
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>gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1145F05,
             from chromosome 3, complete sequence
          Length = 127348

 Score =  155 bits (78), Expect = 1e-34
 Identities = 164/193 (84%)
 Strand = Plus / Minus

                                                                         
Query: 246   tgggctaccgccttccccccaaagaaatacaggacattgttgatgcaccaccacttcctg 305
             |||||||||||||||| || ||||||||||| ||||| |||||||||||||| || || |
Sbjct: 90101 tgggctaccgccttcctccaaaagaaatacaagacatcgttgatgcaccaccgctacccg 90042

                                                                         
Query: 306   ttttgtcgttctcaccaagcaaagacaagattctgtttctcaaacgtcgagcgcttccac 365
             |  | || ||||| |||||||| ||||||||| | || || || || ||||| || ||||
Sbjct: 90041 tgctatcattctcgccaagcaaggacaagattttattcctgaagcgccgagcactgccac 89982

                                                                         
Query: 366   cactatctgatctcgcanagcctgaggagaaacttgctggtgtgaggattgatggccatt 425
             || | || ||||||||| ||||||| |||||||||||||||||||| ||||||||| |||
Sbjct: 89981 cattgtcggatctcgcaaagcctgaagagaaacttgctggtgtgagaattgatggctatt 89922

                          
Query: 426   ctaacactagaag 438
             |||| ||||||||
Sbjct: 89921 ctaatactagaag 89909
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  155 bits (78), Expect = 1e-34
 Identities = 164/193 (84%)
 Strand = Plus / Plus

                                                                            
Query: 246      tgggctaccgccttccccccaaagaaatacaggacattgttgatgcaccaccacttcctg 305
                |||||||||||||||| || ||||||||||| ||||| |||||||||||||| || || |
Sbjct: 10889029 tgggctaccgccttcctccaaaagaaatacaagacatcgttgatgcaccaccgctacccg 10889088

                                                                            
Query: 306      ttttgtcgttctcaccaagcaaagacaagattctgtttctcaaacgtcgagcgcttccac 365
                |  | || ||||| |||||||| ||||||||| | || || || || ||||| || ||||
Sbjct: 10889089 tgctatcattctcgccaagcaaggacaagattttattcctgaagcgccgagcactgccac 10889148

                                                                            
Query: 366      cactatctgatctcgcanagcctgaggagaaacttgctggtgtgaggattgatggccatt 425
                || | || ||||||||| ||||||| |||||||||||||||||||| ||||||||| |||
Sbjct: 10889149 cattgtcggatctcgcaaagcctgaagagaaacttgctggtgtgagaattgatggctatt 10889208

                             
Query: 426      ctaacactagaag 438
                |||| ||||||||
Sbjct: 10889209 ctaatactagaag 10889221
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>dbj|AK102205.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087G11, full
           insert sequence
          Length = 3287

 Score =  155 bits (78), Expect = 1e-34
 Identities = 164/193 (84%)
 Strand = Plus / Plus

                                                                       
Query: 246 tgggctaccgccttccccccaaagaaatacaggacattgttgatgcaccaccacttcctg 305
           |||||||||||||||| || ||||||||||| ||||| |||||||||||||| || || |
Sbjct: 282 tgggctaccgccttcctccaaaagaaatacaagacatcgttgatgcaccaccgctacccg 341

                                                                       
Query: 306 ttttgtcgttctcaccaagcaaagacaagattctgtttctcaaacgtcgagcgcttccac 365
           |  | || ||||| |||||||| ||||||||| | || || || || ||||| || ||||
Sbjct: 342 tgctatcattctcgccaagcaaggacaagattttattcctgaagcgccgagcactgccac 401

                                                                       
Query: 366 cactatctgatctcgcanagcctgaggagaaacttgctggtgtgaggattgatggccatt 425
           || | || ||||||||| ||||||| |||||||||||||||||||| ||||||||| |||
Sbjct: 402 cattgtcggatctcgcaaagcctgaagagaaacttgctggtgtgagaattgatggctatt 461

                        
Query: 426 ctaacactagaag 438
           |||| ||||||||
Sbjct: 462 ctaatactagaag 474
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>dbj|AB046401.1| Oryza sativa (indica cultivar-group) OsNAS1, OsNAS2 genes for
             nicotianamine synthase 1 and 2, complete cds
          Length = 13555

 Score =  155 bits (78), Expect = 1e-34
 Identities = 164/193 (84%)
 Strand = Plus / Minus

                                                                         
Query: 246   tgggctaccgccttccccccaaagaaatacaggacattgttgatgcaccaccacttcctg 305
             |||||||||||||||| || ||||||||||| ||||| |||||||||||||| || || |
Sbjct: 13284 tgggctaccgccttcctccaaaagaaatacaagacatcgttgatgcaccaccgctacccg 13225

                                                                         
Query: 306   ttttgtcgttctcaccaagcaaagacaagattctgtttctcaaacgtcgagcgcttccac 365
             |  | || ||||| |||||||| ||||||||| | || || || || ||||| || ||||
Sbjct: 13224 tgctatcattctcgccaagcaaggacaagattttattcctgaagcgccgagcactgccac 13165

                                                                         
Query: 366   cactatctgatctcgcanagcctgaggagaaacttgctggtgtgaggattgatggccatt 425
             || | || ||||||||| ||||||| |||||||||||||||||||| ||||||||| |||
Sbjct: 13164 cattgtcggatctcgcaaagcctgaagagaaacttgctggtgtgagaattgatggctatt 13105

                          
Query: 426   ctaacactagaag 438
             |||| ||||||||
Sbjct: 13104 ctaatactagaag 13092
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 97      cggccgctccgccggcctcgcc 118
               ||||||||||||||||||||||
Sbjct: 2969088 cggccgctccgccggcctcgcc 2969067
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>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0044P19, complete sequence
          Length = 176917

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 362   ccaccactatctgatctcgca 382
             |||||||||||||||||||||
Sbjct: 73998 ccaccactatctgatctcgca 73978
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>gb|AC138232.10| Mus musculus chromosome 1, clone RP23-39C19, complete sequence
          Length = 199733

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 316   ctcaccaagcaaagacaagat 336
             |||||||||||||||||||||
Sbjct: 65909 ctcaccaagcaaagacaagat 65929
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>gb|AC130729.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668F02,
             complete sequence
          Length = 178061

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 106   cgccggcctcgccgggtcgcc 126
             |||||||||||||||||||||
Sbjct: 96703 cgccggcctcgccgggtcgcc 96683
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>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09,
             complete sequence
          Length = 177374

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 362   ccaccactatctgatctcgca 382
             |||||||||||||||||||||
Sbjct: 16579 ccaccactatctgatctcgca 16559
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>gb|AC160132.2| Mus musculus BAC clone RP23-197I12 from chromosome 9, complete
            sequence
          Length = 202786

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 52   ccgctcgcgcccctgcgcgctcccc 76
            ||||||||||||| |||||||||||
Sbjct: 2103 ccgctcgcgcccccgcgcgctcccc 2127
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 362      ccaccactatctgatctcgca 382
                |||||||||||||||||||||
Sbjct: 20760774 ccaccactatctgatctcgca 20760754



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 106      cgccggcctcgccgggtcgcc 126
                |||||||||||||||||||||
Sbjct: 19955539 cgccggcctcgccgggtcgcc 19955519
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>gb|AC157586.2| Mus musculus BAC clone RP24-406D13 from chromosome 9, complete sequence
          Length = 218664

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 52    ccgctcgcgcccctgcgcgctcccc 76
             ||||||||||||| |||||||||||
Sbjct: 88330 ccgctcgcgcccccgcgcgctcccc 88354
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 90     tcttccgcggccgctccgccggcctcgcc 118
              ||||||||||| ||| |||||||||||||
Sbjct: 386589 tcttccgcggcggctgcgccggcctcgcc 386561
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>gb|AC113507.12| Mus musculus chromosome 3, clone RP23-376O10, complete sequence
          Length = 210262

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 288   atgcaccaccacttcctgttt 308
             |||||||||||||||||||||
Sbjct: 94602 atgcaccaccacttcctgttt 94582
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>ref|XM_476726.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 297

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 155 acatcgccgccgtcgcagcc 174
           ||||||||||||||||||||
Sbjct: 273 acatcgccgccgtcgcagcc 292
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 97      cggccgctccgccggcctcgccgg 120
               ||||||||||||||||| ||||||
Sbjct: 3941664 cggccgctccgccggccccgccgg 3941641



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 97      cggccgctccgccggcctcgccgg 120
               ||||||||||||||||| ||||||
Sbjct: 3941304 cggccgctccgccggccccgccgg 3941281



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 97      cggccgctccgccggcctcgccgg 120
               ||||||||||||||||| ||||||
Sbjct: 3940878 cggccgctccgccggccccgccgg 3940855
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>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome
          Length = 2560265

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 108     ccggcctcgccgggtcgcca 127
               ||||||||||||||||||||
Sbjct: 1779668 ccggcctcgccgggtcgcca 1779649
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>gb|AC132335.3| Mus musculus BAC clone RP24-230C24 from chromosome 10, complete
            sequence
          Length = 180642

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 360  ttccaccactatctgatctc 379
            ||||||||||||||||||||
Sbjct: 4385 ttccaccactatctgatctc 4404
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>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 40     ctcgccctgctcccgctcgcgcccctgc 67
              |||||||| |||| ||||||||||||||
Sbjct: 842475 ctcgccctcctcctgctcgcgcccctgc 842502
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>ref|NM_194449.1| Homo sapiens PH domain and leucine rich repeat protein phosphatase
            (PHLPP), mRNA
          Length = 4798

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 258  ttccccccaaagaaatacag 277
            ||||||||||||||||||||
Sbjct: 4206 ttccccccaaagaaatacag 4187
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>ref|XM_538506.2| PREDICTED: Canis familiaris hypothetical LOC481385 (LOC481385),
           mRNA
          Length = 2442

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 159 cgccgccgtcgcagcctccg 178
           ||||||||||||||||||||
Sbjct: 411 cgccgccgtcgcagcctccg 392
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>gb|BC014927.2| Homo sapiens pleckstrin homology domain containing, family E (with
            leucine rich repeats) member 1, mRNA (cDNA clone
            IMAGE:3916044), partial cds
          Length = 4704

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 258  ttccccccaaagaaatacag 277
            ||||||||||||||||||||
Sbjct: 4096 ttccccccaaagaaatacag 4077
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>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13
          Length = 349606

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 97     cggccgctccgccggcctcgccgg 120
              ||||||||||||||||| ||||||
Sbjct: 131003 cggccgctccgccggccccgccgg 130980



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 97     cggccgctccgccggcctcgccgg 120
              ||||||||||||||||| ||||||
Sbjct: 130763 cggccgctccgccggccccgccgg 130740



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 97     cggccgctccgccggcctcgccgg 120
              ||||||||||||||||| ||||||
Sbjct: 130412 cggccgctccgccggccccgccgg 130389



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 97     cggccgctccgccggcctcgccgg 120
              ||||||||||||||||| ||||||
Sbjct: 130061 cggccgctccgccggccccgccgg 130038
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>gb|BC047653.1| Homo sapiens PH domain and leucine rich repeat protein phosphatase,
            mRNA (cDNA clone IMAGE:5259974), partial cds
          Length = 2989

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 258  ttccccccaaagaaatacag 277
            ||||||||||||||||||||
Sbjct: 2383 ttccccccaaagaaatacag 2364
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>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 13/14
          Length = 316050

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 97     cggccgctccgccggcctcgccgg 120
              ||||||||||||||||| ||||||
Sbjct: 141604 cggccgctccgccggccccgccgg 141581



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 97     cggccgctccgccggcctcgccgg 120
              ||||||||||||||||| ||||||
Sbjct: 141319 cggccgctccgccggccccgccgg 141296



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 97     cggccgctccgccggcctcgccgg 120
              ||||||||||||||||| ||||||
Sbjct: 140968 cggccgctccgccggccccgccgg 140945
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>emb|AL731635.3|OSJN00277 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0016B03,
              complete sequence
          Length = 125780

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 155    acatcgccgccgtcgcagcc 174
              ||||||||||||||||||||
Sbjct: 110863 acatcgccgccgtcgcagcc 110882
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>emb|AL731627.3|OSJN00272 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0095E20,
            complete sequence
          Length = 138572

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 155  acatcgccgccgtcgcagcc 174
            ||||||||||||||||||||
Sbjct: 1439 acatcgccgccgtcgcagcc 1458
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>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111
          Length = 2356219

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 254     cgccttccccccaaagaaat 273
               ||||||||||||||||||||
Sbjct: 1034942 cgccttccccccaaagaaat 1034923
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>gb|AC027553.6| Homo sapiens, clone RP11-53O13, complete sequence
          Length = 159914

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 258   ttccccccaaagaaatacag 277
             ||||||||||||||||||||
Sbjct: 51924 ttccccccaaagaaatacag 51943
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 155     acatcgccgccgtcgcagcc 174
               ||||||||||||||||||||
Sbjct: 2385544 acatcgccgccgtcgcagcc 2385563
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>gb|AF533985.1| Streptomyces sp. EN27 plasmid pEN2701, complete sequence
          Length = 12855

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 160  gccgccgtcgcagcctccgg 179
            ||||||||||||||||||||
Sbjct: 9649 gccgccgtcgcagcctccgg 9630
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 155     acatcgccgccgtcgcagcc 174
               ||||||||||||||||||||
Sbjct: 3601987 acatcgccgccgtcgcagcc 3602006
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 158      tcgccgccgtcgcagcctcc 177
                ||||||||||||||||||||
Sbjct: 26355704 tcgccgccgtcgcagcctcc 26355723
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>gb|BC063519.1| Homo sapiens PH domain and leucine rich repeat protein phosphatase,
            mRNA (cDNA clone IMAGE:4341956), partial cds
          Length = 2860

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 258  ttccccccaaagaaatacag 277
            ||||||||||||||||||||
Sbjct: 2254 ttccccccaaagaaatacag 2235
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>gb|BC010706.1| Homo sapiens PH domain and leucine rich repeat protein phosphatase,
            mRNA (cDNA clone IMAGE:3874711), partial cds
          Length = 2661

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 258  ttccccccaaagaaatacag 277
            ||||||||||||||||||||
Sbjct: 2044 ttccccccaaagaaatacag 2025
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 97      cggccgctccgccggcctcgccgg 120
               |||||||||||||||| |||||||
Sbjct: 3894682 cggccgctccgccggcatcgccgg 3894659
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>gb|AC021299.17| Homo sapiens chromosome 18, clone RP11-159K14, complete sequence
          Length = 168716

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 258   ttccccccaaagaaatacag 277
             ||||||||||||||||||||
Sbjct: 36622 ttccccccaaagaaatacag 36603
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>dbj|AP002485.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:P0491E01
          Length = 136150

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 158   tcgccgccgtcgcagcctcc 177
             ||||||||||||||||||||
Sbjct: 88056 tcgccgccgtcgcagcctcc 88075
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>dbj|AP003842.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1641_C04
          Length = 134367

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 155   acatcgccgccgtcgcagcc 174
             ||||||||||||||||||||
Sbjct: 71304 acatcgccgccgtcgcagcc 71323
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>dbj|AP004267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0039H02
          Length = 169162

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 155    acatcgccgccgtcgcagcc 174
              ||||||||||||||||||||
Sbjct: 139937 acatcgccgccgtcgcagcc 139956
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>gb|AC166165.3| Mus musculus BAC clone RP23-381I17 from chromosome 10, complete
             sequence
          Length = 217425

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 360   ttccaccactatctgatctc 379
             ||||||||||||||||||||
Sbjct: 72933 ttccaccactatctgatctc 72952
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>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2
          Length = 339972

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 158   tcgccgccgtcgcagcctcc 177
             ||||||||||||||||||||
Sbjct: 78847 tcgccgccgtcgcagcctcc 78866
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>emb|AL953859.7| Zebrafish DNA sequence from clone DKEY-53P21, complete sequence
          Length = 203360

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 265   caaagaaatacaggacattg 284
             ||||||||||||||||||||
Sbjct: 22760 caaagaaatacaggacattg 22741
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>gb|BC050272.1| Homo sapiens zinc finger, DHHC-type containing 2, mRNA (cDNA clone
           MGC:21181 IMAGE:4398300), complete cds
          Length = 2096

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 99  gccgctccgccggcctcgcc 118
           ||||||||||||||||||||
Sbjct: 112 gccgctccgccggcctcgcc 131
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>gb|U19817.1|AGU19817 Arthrobacter globiformis 3,4-dihydroxyphenylacetate 2,3-dioxygenase
           (mndD) gene, complete cds, and putative semialdehyde
           dehydrogenase (mndC') and putative
           2-hydroxy-pent-2,4-dienoate hydratase (mndE') genes,
           partial cds
          Length = 2028

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 156 catcgccgccgtcgcagcct 175
           ||||||||||||||||||||
Sbjct: 796 catcgccgccgtcgcagcct 815
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>emb|AL772145.9| Mouse DNA sequence from clone RP23-212H4 on chromosome 3, complete
              sequence
          Length = 228623

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 140    cctccaggatgtcccacatc 159
              ||||||||||||||||||||
Sbjct: 219296 cctccaggatgtcccacatc 219277
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>dbj|AB011178.2| Homo sapiens mRNA for KIAA0606 protein, partial cds
          Length = 5113

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 258  ttccccccaaagaaatacag 277
            ||||||||||||||||||||
Sbjct: 4522 ttccccccaaagaaatacag 4503


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,528,522
Number of Sequences: 3902068
Number of extensions: 3528522
Number of successful extensions: 100923
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100191
Number of HSP's gapped (non-prelim): 727
length of query: 439
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 417
effective length of database: 17,147,199,772
effective search space: 7150382304924
effective search space used: 7150382304924
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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