ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl45f05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MYST4_MOUSE (Q8BRB7) Histone acetyltransferase MYST4 (EC 2.3.1.4... 28 4.2
2MYST4_HUMAN (Q8WYB5) Histone acetyltransferase MYST4 (EC 2.3.1.4... 28 4.2
3MYST4_MACFA (Q8WML3) Histone acetyltransferase MYST4 (EC 2.3.1.4... 28 4.2
4TOP2A_PIG (O46374) DNA topoisomerase 2-alpha (EC 5.99.1.3) (DNA ... 27 9.3
5STTP1_MOUSE (Q91WG4) Stat3-interacting protein (StIP1) 27 9.3
6OXAA_STRCO (O54569) Membrane protein oxaA 27 9.3

>MYST4_MOUSE (Q8BRB7) Histone acetyltransferase MYST4 (EC 2.3.1.48) (EC 2.3.1.-)|
           (MYST protein 4) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein
           4) (Querkopf protein)
          Length = 1872

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +3

Query: 84  IPLCSFPMEISASASTPQALTLLTCPPCFPSLHPS 188
           IP+CSF +    S    +   LL+C  C  S HPS
Sbjct: 214 IPICSFCLGTKESNREKKPEELLSCADCGSSGHPS 248



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>MYST4_HUMAN (Q8WYB5) Histone acetyltransferase MYST4 (EC 2.3.1.48) (EC 2.3.1.-)|
           (MYST protein 4) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein
           4) (Histone acetyltransferase MOZ2) (Monocytic leukemia
           zinc finger protein-related factor) (Histone
           acetyltransferas
          Length = 2073

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +3

Query: 84  IPLCSFPMEISASASTPQALTLLTCPPCFPSLHPS 188
           IP+CSF +    S    +   LL+C  C  S HPS
Sbjct: 213 IPICSFCLGTKESNREKKPEELLSCADCGSSGHPS 247



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>MYST4_MACFA (Q8WML3) Histone acetyltransferase MYST4 (EC 2.3.1.48) (EC 2.3.1.-)|
           (MYST protein 4) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein
           4)
          Length = 1784

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +3

Query: 84  IPLCSFPMEISASASTPQALTLLTCPPCFPSLHPS 188
           IP+CSF +    S    +   LL+C  C  S HPS
Sbjct: 213 IPICSFCLGTKESNREKKPEELLSCADCGSSGHPS 247



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>TOP2A_PIG (O46374) DNA topoisomerase 2-alpha (EC 5.99.1.3) (DNA topoisomerase|
            II, alpha isozyme)
          Length = 1533

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -3

Query: 361  RSAAXATTEPPKTSSEVEDEPLREHPTGRRARYPSSN 251
            R+A     + P   S+V  +P    P GRR R PS++
Sbjct: 1437 RAAPKGAKKDPDLDSDVSKKPNPPKPKGRRKRKPSTS 1473



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>STTP1_MOUSE (Q91WG4) Stat3-interacting protein (StIP1)|
          Length = 831

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +1

Query: 226 CCGLRLNGGLSWGTVPAG 279
           CC  R+ G LSW T P G
Sbjct: 13  CCPNRVRGALSWNTGPGG 30



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>OXAA_STRCO (O54569) Membrane protein oxaA|
          Length = 431

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -3

Query: 370 KAARSAAXATTEPPKTSSEVEDEPLREHPTGRRARYPSS 254
           K+ R A  A    PKTS    DEP    P G++   P++
Sbjct: 359 KSQRQAKPAGETEPKTSLTKSDEPQDAEPAGKQDAKPAA 397


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,729,984
Number of Sequences: 219361
Number of extensions: 427992
Number of successful extensions: 1507
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1507
length of database: 80,573,946
effective HSP length: 99
effective length of database: 58,857,207
effective search space used: 1412572968
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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