>gb|AC092173.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0095J15,
              complete sequence
          Length = 156023

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                    
Query: 27     cctcgcaaactctggataaaactcatcatctcatcatc 64
              |||||||||||| ||||||| |||||||||||||||||
Sbjct: 109119 cctcgcaaactccggataaacctcatcatctcatcatc 109082

>gb|AC091238.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone
           OSJNBb0022I16, complete sequence
          Length = 127068

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                 
Query: 27  cctcgcaaactctggataaaactcatcatctcatcatc 64
           |||||||||||| ||||||| |||||||||||||||||
Sbjct: 546 cctcgcaaactccggataaacctcatcatctcatcatc 509

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                     
Query: 27      cctcgcaaactctggataaaactcatcatctcatcatc 64
               |||||||||||| ||||||| |||||||||||||||||
Sbjct: 5237348 cctcgcaaactccggataaacctcatcatctcatcatc 5237311

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                     
Query: 27      cctcgcaaactctggataaaactcatcatctcatcatc 64
               |||||||||||| ||||||| |||||||||||||||||
Sbjct: 5238135 cctcgcaaactccggataaacctcatcatctcatcatc 5238098

>gb|AY107864.1| Zea mays PCO073660 mRNA sequence
          Length = 981

 Score = 46.1 bits (23), Expect = 0.080
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 102 cccatggagatctccgcctccgc 124
           |||||||||||||||||||||||
Sbjct: 87  cccatggagatctccgcctccgc 109

>emb|AL031120.1|HS459L4 Human DNA sequence from clone RP3-459L4 on chromosome 6p22.3-24.1
              Contains part of the SCA1 gene for spinocerebellar ataxia 1
              (olivopontocerebellar ataxia 1, autosomal dominant, ataxin
              1), complete sequence
          Length = 165363

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 159    cccccttgctttccctctcttc 180
              ||||||||||||||||||||||
Sbjct: 111345 cccccttgctttccctctcttc 111366

>gb|AC103419.6| Rattus norvegicus 9 BAC CH230-145A24 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 217001

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 167   ctttccctctcttcacccttcc 188
             ||||||||||||||||||||||
Sbjct: 72156 ctttccctctcttcacccttcc 72177

>ref|XM_465944.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1262

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 190 cccgccggcacggccgcgccg 210
           |||||||||||||||||||||
Sbjct: 526 cccgccggcacggccgcgccg 506

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 101      ccccatggagatctccgcctccgcc 125
                ||||||||||| |||||||||||||
Sbjct: 22271036 ccccatggagacctccgcctccgcc 22271012

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 190      cccgccggcacggccgcgccg 210
                |||||||||||||||||||||
Sbjct: 18471974 cccgccggcacggccgcgccg 18471994

>dbj|AP006171.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0070E11
          Length = 142855

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 101   ccccatggagatctccgcctccgcc 125
             ||||||||||| |||||||||||||
Sbjct: 90934 ccccatggagacctccgcctccgcc 90910

>dbj|AP005558.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1155_H10
          Length = 140475

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 101   ccccatggagatctccgcctccgcc 125
             ||||||||||| |||||||||||||
Sbjct: 33044 ccccatggagacctccgcctccgcc 33020

>dbj|AP005299.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1789_D08
          Length = 128673

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 190   cccgccggcacggccgcgccg 210
             |||||||||||||||||||||
Sbjct: 13113 cccgccggcacggccgcgccg 13133

>dbj|AP004861.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0001A11
          Length = 153252

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 190    cccgccggcacggccgcgccg 210
              |||||||||||||||||||||
Sbjct: 134898 cccgccggcacggccgcgccg 134918

>dbj|AK108786.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-B01, full
           insert sequence
          Length = 1262

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 190 cccgccggcacggccgcgccg 210
           |||||||||||||||||||||
Sbjct: 526 cccgccggcacggccgcgccg 506

>dbj|AK065725.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013035O15, full
           insert sequence
          Length = 4175

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 101 ccccatggagatctccgcctccgcc 125
           ||||||||||| |||||||||||||
Sbjct: 254 ccccatggagacctccgcctccgcc 278

>dbj|AP002987.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-428C14, complete
              sequence
          Length = 166893

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 75     aaccccgccattcccctctgc 95
              |||||||||||||||||||||
Sbjct: 126195 aaccccgccattcccctctgc 126215

>gb|AC101684.13| Mus musculus chromosome 1, clone RP23-187I13, complete sequence
          Length = 227440

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    ttcccctctgctccttcccc 104
             ||||||||||||||||||||
Sbjct: 80816 ttcccctctgctccttcccc 80797

>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 198     cacggccgcgccggcggggg 217
               ||||||||||||||||||||
Sbjct: 2213189 cacggccgcgccggcggggg 2213208

>gb|AC123834.4| Mus musculus BAC clone RP24-132N9 from chromosome 13, complete sequence
          Length = 153028

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    ttcccctctgctccttcccc 104
             ||||||||||||||||||||
Sbjct: 48510 ttcccctctgctccttcccc 48491

>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 188     cgcccgccggcacggccgcgccgg 211
               |||||||||||||| |||||||||
Sbjct: 1254500 cgcccgccggcacgcccgcgccgg 1254523

>gb|AC106716.3| Homo sapiens 3 BAC RP11-202P1 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 152883

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 161    cccttgctttccctctcttcaccc 184
              |||||||||||||||| |||||||
Sbjct: 136962 cccttgctttccctcttttcaccc 136985

>gb|AC117424.6| Homo sapiens 3 BAC RP11-172I10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 136511

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 161   cccttgctttccctctcttcaccc 184
             |||||||||||||||| |||||||
Sbjct: 65704 cccttgctttccctcttttcaccc 65681

>dbj|AP006116.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT40C04, TM0199,
             complete sequence
          Length = 123325

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 205   gcgccggcgggggagggctc 224
             ||||||||||||||||||||
Sbjct: 62901 gcgccggcgggggagggctc 62920

>emb|AL611986.15| Mouse DNA sequence from clone RP23-74I9 on chromosome 15, complete
             sequence
          Length = 191808

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 159   cccccttgctttccctctct 178
             ||||||||||||||||||||
Sbjct: 32940 cccccttgctttccctctct 32921


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,558,478
Number of Sequences: 3902068
Number of extensions: 2558478
Number of successful extensions: 63127
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62819
Number of HSP's gapped (non-prelim): 308
length of query: 372
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 350
effective length of database: 17,147,199,772
effective search space: 6001519920200
effective search space used: 6001519920200
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)