ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl45d12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_506148.1| PREDICTED Oryza sativa (japonica cultivar-group), P0474G09.102 mRNA Length = 3214 Score = 87.7 bits (44), Expect = 3e-14 Identities = 83/96 (86%) Strand = Plus / Plus Query: 231 agcagcagccatggcgtctcgtttttggggacagggagacagtgactctgaggaggatgt 290 ||||||||||||||| || ||||||||||||||||||||||| ||||| |||||||| | Sbjct: 155 agcagcagccatggcatcccgtttttggggacagggagacagcgactccgaggaggagga 214 Query: 291 ggacgagatcgagtcagaacaagggagtgatagcga 326 | | ||||| ||||||||| ||| ||||| ||||| Sbjct: 215 gcaggagattgagtcagaagcaggaagtgaaagcga 250
>ref|XM_476451.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3207 Score = 87.7 bits (44), Expect = 3e-14 Identities = 83/96 (86%) Strand = Plus / Plus Query: 231 agcagcagccatggcgtctcgtttttggggacagggagacagtgactctgaggaggatgt 290 ||||||||||||||| || ||||||||||||||||||||||| ||||| |||||||| | Sbjct: 148 agcagcagccatggcatcccgtttttggggacagggagacagcgactccgaggaggagga 207 Query: 291 ggacgagatcgagtcagaacaagggagtgatagcga 326 | | ||||| ||||||||| ||| ||||| ||||| Sbjct: 208 gcaggagattgagtcagaagcaggaagtgaaagcga 243
>dbj|AK101000.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023147D18, full insert sequence Length = 3206 Score = 87.7 bits (44), Expect = 3e-14 Identities = 83/96 (86%) Strand = Plus / Plus Query: 231 agcagcagccatggcgtctcgtttttggggacagggagacagtgactctgaggaggatgt 290 ||||||||||||||| || ||||||||||||||||||||||| ||||| |||||||| | Sbjct: 147 agcagcagccatggcatcccgtttttggggacagggagacagcgactccgaggaggagga 206 Query: 291 ggacgagatcgagtcagaacaagggagtgatagcga 326 | | ||||| ||||||||| ||| ||||| ||||| Sbjct: 207 gcaggagattgagtcagaagcaggaagtgaaagcga 242
>dbj|AK070529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060K11, full insert sequence Length = 3214 Score = 87.7 bits (44), Expect = 3e-14 Identities = 83/96 (86%) Strand = Plus / Plus Query: 231 agcagcagccatggcgtctcgtttttggggacagggagacagtgactctgaggaggatgt 290 ||||||||||||||| || ||||||||||||||||||||||| ||||| |||||||| | Sbjct: 155 agcagcagccatggcatcccgtttttggggacagggagacagcgactccgaggaggagga 214 Query: 291 ggacgagatcgagtcagaacaagggagtgatagcga 326 | | ||||| ||||||||| ||| ||||| ||||| Sbjct: 215 gcaggagattgagtcagaagcaggaagtgaaagcga 250
>ref|XM_463934.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2784 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 241 atggcgtctcgtttttggggacagggagacagtgactctgaggaggatgtggacgagatc 300 ||||| |||||||| ||||||||||||||||| |||||||||||||| | | | ||||| Sbjct: 1 atggcatctcgtttctggggacagggagacagcgactctgaggaggaggagcaggagatt 60 Query: 301 gagtcagaa 309 ||||||||| Sbjct: 61 gagtcagaa 69 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 431 ttcgctcgttgaaggacaagcgcaatgatgagatgaa 467 ||||||| |||||||| ||||||||||| ||| |||| Sbjct: 191 ttcgctctttgaaggataagcgcaatgaagagttgaa 227
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 231 agcagcagccatggcgtctcgtttttggggacagg 265 ||||||||||||||| || |||||||||||||||| Sbjct: 1274167 agcagcagccatggcatcccgtttttggggacagg 1274201 Score = 42.1 bits (21), Expect = 1.6 Identities = 54/65 (83%) Strand = Plus / Plus Query: 262 cagggagacagtgactctgaggaggatgtggacgagatcgagtcagaacaagggagtgat 321 ||||||||||| ||||| |||||||| | | | ||||| ||||||||| ||| ||||| Sbjct: 1274332 cagggagacagcgactccgaggaggaggagcaggagattgagtcagaagcaggaagtgaa 1274391 Query: 322 agcga 326 ||||| Sbjct: 1274392 agcga 1274396 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 catctccacctccacctcca 39 |||||||||||||||||||| Sbjct: 23631857 catctccacctccacctcca 23631838 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 tctccatctccacctccacctcca 39 |||||| ||||||||||||||||| Sbjct: 23631855 tctccacctccacctccacctcca 23631832 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 ctctccatctccacctccacctcc 38 ||||||||||||||| |||||||| Sbjct: 22460015 ctctccatctccaccaccacctcc 22459992
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 231 agcagcagccatggcgtctcgtttttggggacagg 265 ||||||||||||||| |||||||| |||||||||| Sbjct: 1219296 agcagcagccatggcatctcgtttctggggacagg 1219330 Score = 48.1 bits (24), Expect = 0.026 Identities = 42/48 (87%) Strand = Plus / Plus Query: 262 cagggagacagtgactctgaggaggatgtggacgagatcgagtcagaa 309 ||||||||||| |||||||||||||| | | | ||||| ||||||||| Sbjct: 1219453 cagggagacagcgactctgaggaggaggagcaggagattgagtcagaa 1219500 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 431 ttcgctcgttgaaggacaagcgcaatgatgagatgaa 467 ||||||| |||||||| ||||||||||| ||| |||| Sbjct: 1219622 ttcgctctttgaaggataagcgcaatgaagagttgaa 1219658 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ctccacctccacctccagcc 42 |||||||||||||||||||| Sbjct: 3173812 ctccacctccacctccagcc 3173831
>dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0575F10 Length = 150462 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 231 agcagcagccatggcgtctcgtttttggggacagg 265 ||||||||||||||| |||||||| |||||||||| Sbjct: 50387 agcagcagccatggcatctcgtttctggggacagg 50421 Score = 48.1 bits (24), Expect = 0.026 Identities = 42/48 (87%) Strand = Plus / Plus Query: 262 cagggagacagtgactctgaggaggatgtggacgagatcgagtcagaa 309 ||||||||||| |||||||||||||| | | | ||||| ||||||||| Sbjct: 50544 cagggagacagcgactctgaggaggaggagcaggagattgagtcagaa 50591 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 431 ttcgctcgttgaaggacaagcgcaatgatgagatgaa 467 ||||||| |||||||| ||||||||||| ||| |||| Sbjct: 50713 ttcgctctttgaaggataagcgcaatgaagagttgaa 50749
>dbj|AP005309.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0474G09 Length = 169511 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 231 agcagcagccatggcgtctcgtttttggggacagg 265 ||||||||||||||| || |||||||||||||||| Sbjct: 39002 agcagcagccatggcatcccgtttttggggacagg 39036 Score = 42.1 bits (21), Expect = 1.6 Identities = 54/65 (83%) Strand = Plus / Plus Query: 262 cagggagacagtgactctgaggaggatgtggacgagatcgagtcagaacaagggagtgat 321 ||||||||||| ||||| |||||||| | | | ||||| ||||||||| ||| ||||| Sbjct: 39167 cagggagacagcgactccgaggaggaggagcaggagattgagtcagaagcaggaagtgaa 39226 Query: 322 agcga 326 ||||| Sbjct: 39227 agcga 39231
>gb|AC132189.13| Mus musculus chromosome 12, clone RP24-95M20, complete sequence Length = 203534 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 10 ctagcctctccatctccacctccacctccagcc 42 |||||||||||||| ||||||||||| |||||| Sbjct: 55343 ctagcctctccatccccacctccacccccagcc 55375
>gb|AC126685.5| Mus musculus BAC clone RP23-103I23 from chromosome 12, complete sequence Length = 193708 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 10 ctagcctctccatctccacctccacctccagcc 42 |||||||||||||| ||||||||||| |||||| Sbjct: 24359 ctagcctctccatccccacctccacccccagcc 24327
>gb|AC118646.23| Mus musculus chromosome 15, clone RP24-116A18, complete sequence Length = 205272 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||||||||||||||||||||| Sbjct: 165035 tctccatctccacctccacctcca 165058 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||| ||||||||||||||||| Sbjct: 165041 tctccacctccacctccacctcca 165064
>gb|AC152952.1| Mus musculus 6 BAC RP23-86B3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 187484 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 16 tctccatctccacctccacctcca 39 |||||||||||||||||||||||| Sbjct: 102656 tctccatctccacctccacctcca 102633
>gb|AC184714.1| Macaca mulatta clone CH250-396P23 map human ortholog 8p23.1, complete sequence Length = 174987 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||||||||||||||||||||| Sbjct: 81680 tctccatctccacctccacctcca 81703 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||||||||||||||||||||| Sbjct: 81580 tctccatctccacctccacctcca 81603 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 17 ctccatctccacctccacctcca 39 ||||||||||||||||||||||| Sbjct: 81657 ctccatctccacctccacctcca 81679 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||| ||||||||||||||||| Sbjct: 81686 tctccacctccacctccacctcca 81709 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||| ||||||||||||||||| Sbjct: 81586 tctccacctccacctccacctcca 81609
>gb|AC184713.1| Macaca mulatta clone CH250-569D9 map human ortholog 8p23.1, complete sequence Length = 153308 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||||||||||||||||||||| Sbjct: 67114 tctccatctccacctccacctcca 67137 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||||||||||||||||||||| Sbjct: 67014 tctccatctccacctccacctcca 67037 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 17 ctccatctccacctccacctcca 39 ||||||||||||||||||||||| Sbjct: 67091 ctccatctccacctccacctcca 67113 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||| ||||||||||||||||| Sbjct: 67120 tctccacctccacctccacctcca 67143 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||| ||||||||||||||||| Sbjct: 67020 tctccacctccacctccacctcca 67043
>gb|AC184712.1| Macaca mulatta clone CH250-14G4 map human ortholog 8p23.1, complete sequence Length = 190509 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||||||||||||||||||||| Sbjct: 99925 tctccatctccacctccacctcca 99948 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||||||||||||||||||||| Sbjct: 99825 tctccatctccacctccacctcca 99848 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 17 ctccatctccacctccacctcca 39 ||||||||||||||||||||||| Sbjct: 99902 ctccatctccacctccacctcca 99924 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||| ||||||||||||||||| Sbjct: 99931 tctccacctccacctccacctcca 99954 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||| ||||||||||||||||| Sbjct: 99831 tctccacctccacctccacctcca 99854
>gb|AC184711.1| Macaca mulatta clone CH250-63N16 map human ortholog 8p23.1, complete sequence Length = 200536 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||||||||||||||||||||| Sbjct: 114431 tctccatctccacctccacctcca 114454 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||||||||||||||||||||| Sbjct: 114331 tctccatctccacctccacctcca 114354 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 17 ctccatctccacctccacctcca 39 ||||||||||||||||||||||| Sbjct: 114408 ctccatctccacctccacctcca 114430 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||| ||||||||||||||||| Sbjct: 114437 tctccacctccacctccacctcca 114460 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||| ||||||||||||||||| Sbjct: 114337 tctccacctccacctccacctcca 114360
>gb|AC122110.4| Mus Musculus Strain C57BL6/J Chromosome 2 BAC, RP23-319K8, Complete Sequence, complete sequence Length = 179550 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 16 tctccatctccacctccacctcca 39 |||||||||||||||||||||||| Sbjct: 68927 tctccatctccacctccacctcca 68904 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 tctccatctccacctccacctcca 39 |||||| ||||||||||||||||| Sbjct: 68921 tctccacctccacctccacctcca 68898
>gb|AC091226.3| Drosophila melanogaster 3L BAC RP98-3I13 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 165518 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 16 tctccatctccacctccacctcca 39 |||||||||||||||||||||||| Sbjct: 67523 tctccatctccacctccacctcca 67500
>gb|AC142281.2| Homo sapiens fosmid clone XXFOS-86667F1 from 4, complete sequence Length = 5084 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||||||||||||||||||||| Sbjct: 4705 tctccatctccacctccacctcca 4728 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||||||||||||||| ||||| Sbjct: 4873 tctccatctccacctccatctcca 4896 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 ||||||||||||||||||| |||| Sbjct: 4765 tctccatctccacctccacttcca 4788 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||||||||||||||| ||||| Sbjct: 4379 tctccatctccacctccatctcca 4402
>gb|AC104020.10| Homo sapiens chromosome 15, clone RP11-369K8, complete sequence Length = 171307 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||||||||||||||||||||| Sbjct: 126128 tctccatctccacctccacctcca 126151 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 17 ctccatctccacctccacctcca 39 ||||||||||||||||||||||| Sbjct: 126177 ctccatctccacctccacctcca 126199 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ctccatctccacctccacct 36 |||||||||||||||||||| Sbjct: 125868 ctccatctccacctccacct 125887
>gb|AE003537.3| Drosophila melanogaster chromosome 3L, section 48 of 83 of the complete sequence Length = 282116 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 16 tctccatctccacctccacctcca 39 |||||||||||||||||||||||| Sbjct: 131346 tctccatctccacctccacctcca 131323
>emb|AL772152.16| Mouse DNA sequence from clone RP23-157O1 on chromosome 4, complete sequence Length = 195937 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||||||||||||||||||||| Sbjct: 52721 tctccatctccacctccacctcca 52744 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||| ||||||||||||||||| Sbjct: 52727 tctccacctccacctccacctcca 52750
>ref|XM_534039.2| PREDICTED: Canis familiaris similar to T07A9.8 (LOC476835), mRNA Length = 1845 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 270 cagtgactctgaggaggatgtgg 292 ||||||||||||||||||||||| Sbjct: 627 cagtgactctgaggaggatgtgg 649
>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17, complete sequence Length = 160484 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 17 ctccatctccacctccacctcca 39 ||||||||||||||||||||||| Sbjct: 20 ctccatctccacctccacctcca 42 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||| ||||||||||||||||| Sbjct: 25 tctccacctccacctccacctcca 48
>emb|AL606684.3|OSJN00088 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0085I10, complete sequence Length = 150551 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 17 ctccatctccacctccacctcca 39 ||||||||||||||||||||||| Sbjct: 115313 ctccatctccacctccacctcca 115335 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||| ||||||||||||||||| Sbjct: 115318 tctccacctccacctccacctcca 115341
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 17 ctccatctccacctccacctcca 39 ||||||||||||||||||||||| Sbjct: 31017940 ctccatctccacctccacctcca 31017962 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||| ||||||||||||||||| Sbjct: 31017945 tctccacctccacctccacctcca 31017968 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 tctccacctccacctccagc 41 |||||||||||||||||||| Sbjct: 19373613 tctccacctccacctccagc 19373632
>gb|AC007853.4|AC007853 Drosophila melanogaster, chromosome 3R, region 96B-96C, BAC clone BACR03L02, complete sequence Length = 162921 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 17 ctccatctccacctccacctcca 39 ||||||||||||||||||||||| Sbjct: 48335 ctccatctccacctccacctcca 48313
>gb|AC008206.10|AC008206 Drosophila melanogaster, chromosome 3R, region 96B-96B, BAC clone BACR03I15, complete sequence Length = 181132 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 17 ctccatctccacctccacctcca 39 ||||||||||||||||||||||| Sbjct: 111667 ctccatctccacctccacctcca 111645
>gb|AC079949.45| Homo sapiens 12 BAC RP11-575F12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 141775 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 17 ctccatctccacctccacctcca 39 ||||||||||||||||||||||| Sbjct: 80364 ctccatctccacctccacctcca 80342 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 tctccatctccacctccacctcca 39 |||||| ||||||||||||||||| Sbjct: 80359 tctccacctccacctccacctcca 80336
>gb|AE003750.2| Drosophila melanogaster chromosome 3R, section 88 of 118 of the complete sequence Length = 227219 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 17 ctccatctccacctccacctcca 39 ||||||||||||||||||||||| Sbjct: 70854 ctccatctccacctccacctcca 70832
>ref|XM_479791.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1196 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 14 cctctccatctccacctccacctcca 39 |||||||| ||||||||||||||||| Sbjct: 153 cctctccacctccacctccacctcca 178
>ref|NM_192546.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3243 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 25 ccacctccacctccagcctccgcgcc 50 ||||||||||| |||||||||||||| Sbjct: 94 ccacctccaccgccagcctccgcgcc 69
>gb|AC097175.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1119_H02, complete sequence Length = 138584 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 ctccatctccacctccacctcc 38 |||||||||||||||||||||| Sbjct: 99777 ctccatctccacctccacctcc 99798
>emb|Z49197.1|STGRRBP S.tuberosum mRNA for putative glycine-rich RNA binding protein Length = 726 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 30 tccacctccagcctccgcgcctccgc 55 |||||||||||||||| ||||||||| Sbjct: 286 tccacctccagcctccacgcctccgc 261
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence Length = 168794 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 18 tccatctccacctccacctcca 39 |||||||||||||||||||||| Sbjct: 112630 tccatctccacctccacctcca 112609
>gb|AY517643.1| Chlamydomonas reinhardtii phosphoenolpyruvate carboxylase (Ppc2) mRNA, complete cds Length = 4776 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 18 tccatctccacctccacctcca 39 |||||||||||||||||||||| Sbjct: 3713 tccatctccacctccacctcca 3692
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 14 cctctccatctccacctccacctcca 39 |||||||| ||||||||||||||||| Sbjct: 947493 cctctccacctccacctccacctcca 947518
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 ctccatctccacctccacctcc 38 |||||||||||||||||||||| Sbjct: 23895942 ctccatctccacctccacctcc 23895963
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 25 ccacctccacctccagcctccgcgcc 50 ||||||||||| |||||||||||||| Sbjct: 22867806 ccacctccaccgccagcctccgcgcc 22867831 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 17 ctccatctccacctccacctccagc 41 ||||| ||||||||||||||||||| Sbjct: 3322966 ctccacctccacctccacctccagc 3322942
>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0700A11 Length = 136321 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 25 ccacctccacctccagcctccgcgcc 50 ||||||||||| |||||||||||||| Sbjct: 71363 ccacctccaccgccagcctccgcgcc 71388
>dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470F10 Length = 185294 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 14 cctctccatctccacctccacctcca 39 |||||||| ||||||||||||||||| Sbjct: 110231 cctctccacctccacctccacctcca 110256
>dbj|AK103739.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138K17, full insert sequence Length = 1650 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 ctccatctccacctccacctcc 38 |||||||||||||||||||||| Sbjct: 112 ctccatctccacctccacctcc 133
>dbj|AK099630.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058B07, full insert sequence Length = 1197 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 14 cctctccatctccacctccacctcca 39 |||||||| ||||||||||||||||| Sbjct: 153 cctctccacctccacctccacctcca 178
>gb|DP000022.1| Microcebus murinus target 1 genomic scaffold Length = 1595145 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 18 tccatctccacctccacctcca 39 |||||||||||||||||||||| Sbjct: 369701 tccatctccacctccacctcca 369680 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 catctccacctccacctcca 39 |||||||||||||||||||| Sbjct: 369852 catctccacctccacctcca 369833 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 tctccatctccacctccacctcca 39 |||||| ||||||||||||||||| Sbjct: 369850 tctccacctccacctccacctcca 369827
>gb|AC145439.4| Microcebus murinus clone CH257-441K3, complete sequence Length = 215533 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 18 tccatctccacctccacctcca 39 |||||||||||||||||||||| Sbjct: 11742 tccatctccacctccacctcca 11721 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 catctccacctccacctcca 39 |||||||||||||||||||| Sbjct: 11893 catctccacctccacctcca 11874 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 tctccatctccacctccacctcca 39 |||||| ||||||||||||||||| Sbjct: 11891 tctccacctccacctccacctcca 11868
>gb|AY739096.1| Takifugu rubripes frRHCE, frSMP1, frNPD014, and frP29 genes, complete sequence; frRUNX3 (frRUNX3) gene, complete cds; and frCLIC4, frSRRM1, frMTMR9L, frLCK, frHD, and frKCP3 genes, complete sequence Length = 271832 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 17 ctccatctccacctccacctccagcctcc 45 ||||| ||||||||||||||||| ||||| Sbjct: 215445 ctccacctccacctccacctccaccctcc 215473
>ref|NM_194629.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0079B05.10), mRNA Length = 3810 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 ccatctccacctccacctcca 39 ||||||||||||||||||||| Sbjct: 1798 ccatctccacctccacctcca 1818
>gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence Length = 1590432 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 ctctccatctccacctccacctcca 39 ||||||| ||||||||||||||||| Sbjct: 401775 ctctccacctccacctccacctcca 401799
>gb|AC091702.3| Trypanosoma brucei chromosome 4 clone RPCI93-2L9, complete sequence Length = 161383 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 ctctccatctccacctccacctcca 39 ||||||| ||||||||||||||||| Sbjct: 103091 ctctccacctccacctccacctcca 103115
>gb|AC116601.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0079B05, complete sequence Length = 159382 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 ccatctccacctccacctcca 39 ||||||||||||||||||||| Sbjct: 11135 ccatctccacctccacctcca 11155
>gb|AC120003.6| Mus musculus chromosome 8, clone RP24-148H22, complete sequence Length = 210466 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 328 aaatcagaagctggtgatggg 348 ||||||||||||||||||||| Sbjct: 65576 aaatcagaagctggtgatggg 65556
>gb|AC018491.9| Drosophila melanogaster clone BACR11H15, complete sequence Length = 177953 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 tctccatctccacctccacct 36 ||||||||||||||||||||| Sbjct: 41889 tctccatctccacctccacct 41909 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||||||||| ||||||||||| Sbjct: 41883 tctccatctccatctccacctcca 41906
>gb|AC185537.1| Drosophila melanogaster clone BACR39I01, complete sequence Length = 161147 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 tctccatctccacctccacct 36 ||||||||||||||||||||| Sbjct: 143795 tctccatctccacctccacct 143815 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||||||||| ||||||||||| Sbjct: 143789 tctccatctccatctccacctcca 143812
>gb|AC122305.4| Mus musculus BAC clone RP23-284E19 from 9, complete sequence Length = 192434 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 tccatctccacctccacctcc 38 ||||||||||||||||||||| Sbjct: 153443 tccatctccacctccacctcc 153423
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 ccatctccacctccacctcca 39 ||||||||||||||||||||| Sbjct: 1212423 ccatctccacctccacctcca 1212443
>emb|AL683819.19| Mouse DNA sequence from clone RP23-126J10 on chromosome 11 Contains part of the Car10 gene for carbonic anhydrase 10, complete sequence Length = 134741 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 ctctccatctccacctccacctcca 39 ||||||| ||||||||||||||||| Sbjct: 39062 ctctccacctccacctccacctcca 39086
>emb|AL603707.5| Mouse DNA sequence from clone RP23-422L16 on chromosome 11 Contains the 3' end of the Sat2 gene for spermidine/spermine N1-acetyl transferase 2, a ribosomal potein S15A (Rps15a) pseudogene, a ubiquitin-like 5 (Ubl5) pseudogene, the Fxr2h gene for autosomal homolog of fragile X mental retardation gene 2, the Sox15 gene for SRY-box containing gene 15, the Mpdu1 gene for mannose-P-dolichol utilization defect 1, the Cd68 gene for CD68 antigen, the Eif4a1 gene for eukaryotic translation initiation factor 4A1, the gene for sentrin/SUMO-specific protease Smt3ip1, the Tnfsf13 and Tnfsf12 genes for tumor necrosis factor (ligand) superfamily members 13 and 12, three novel genes, a ribosomal protein L13 (Rpl13) pseudogene, the Polr2a gene for polymerase (RNA) II (DNA directed) polypeptide A, the Amac1 gene for acyl-malonyl condensing enzyme, the gene for a novel BTB/POZ domain containing C2H2 type zinc finger protein, the Chrnb1 gene for nicotinic cholinergic receptor beta polypeptide 1 (muscle), the Fgf11 gene for fibroblast growth factor 11, a novel pseudogene, the gene for the ortholog of human and rat neuroligin 2 NLGN2, the gene for a novel protein of unknown function (DUF423) family member, the Plscr3 gene for phospholipid scramblase 3, the 3' end of the Tnk1 gene for non-receptor tyrosine kinase 1 and nine CpG islands, complete sequence Length = 234182 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 17 ctccatctccacctccacctccagc 41 ||||| ||||||||||||||||||| Sbjct: 61072 ctccacctccacctccacctccagc 61096
>gb|AC079179.5| Oryza sativa chromosome 10 clone OSJNBa0079B05, complete sequence Length = 145526 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 ccatctccacctccacctcca 39 ||||||||||||||||||||| Sbjct: 96661 ccatctccacctccacctcca 96681
>gb|AC159259.2| Mus musculus BAC clone RP24-83G17 from chromosome 3, complete sequence Length = 191517 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 ctctccatctccacctccacctcca 39 |||||||||||||||||| |||||| Sbjct: 133324 ctctccatctccacctcctcctcca 133300
>gb|AC010842.5|AC010842 Drosophila melanogaster, chromosome 2R, region 59F5-59F8, BAC clone BACR02E09, complete sequence Length = 175118 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 17 ctccatctccacctccacctccagc 41 ||||| ||||||||||||||||||| Sbjct: 83350 ctccacctccacctccacctccagc 83374
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 ccatctccacctccacctcca 39 ||||||||||||||||||||| Sbjct: 1212423 ccatctccacctccacctcca 1212443
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 cctctccatctccacctccacctcc 38 |||||||| |||||||||||||||| Sbjct: 17305533 cctctccacctccacctccacctcc 17305509
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 17 ctccatctccacctccacctccagc 41 ||||| ||||||||||||||||||| Sbjct: 25304290 ctccacctccacctccacctccagc 25304266 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 cctctccatctccacctccacctcc 38 |||||||| |||||||||||||||| Sbjct: 5046116 cctctccacctccacctccacctcc 5046092 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||| ||||||||||||||||| Sbjct: 19096208 tctccacctccacctccacctcca 19096231
>gb|DP000024.1| Eulemur macaco macaco target 1 genomic scaffold Length = 1570569 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 ccatctccacctccacctcca 39 ||||||||||||||||||||| Sbjct: 352358 ccatctccacctccacctcca 352338 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 tctccatctccacctccacctcca 39 ||||||| |||||||||||||||| Sbjct: 352409 tctccatttccacctccacctcca 352386
>gb|AF369906.1| Sorghum bicolor clone BAC10J22 Sbb3766 sequence Length = 152439 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 catctccacctccacctccag 40 ||||||||||||||||||||| Sbjct: 85154 catctccacctccacctccag 85174 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 caagcagcagcagccatggc 245 |||||||||||||||||||| Sbjct: 80985 caagcagcagcagccatggc 81004
>dbj|AP003946.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1147_D11 Length = 138444 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 cctctccatctccacctccacctcc 38 |||||||| |||||||||||||||| Sbjct: 5154 cctctccacctccacctccacctcc 5130
>dbj|AP003301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0701D05 Length = 172161 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 17 ctccatctccacctccacctccagc 41 ||||| ||||||||||||||||||| Sbjct: 1336 ctccacctccacctccacctccagc 1312
>dbj|AP003209.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1189A09 Length = 167761 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 17 ctccatctccacctccacctccagc 41 ||||| ||||||||||||||||||| Sbjct: 140595 ctccacctccacctccacctccagc 140571
>dbj|AP004792.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0505A04 Length = 159241 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 17 ctccatctccacctccacctccagc 41 ||||| ||||||||||||||||||| Sbjct: 122898 ctccacctccacctccacctccagc 122874
>dbj|AP005891.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1045B05 Length = 140992 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 cctctccatctccacctccacctcc 38 |||||||| |||||||||||||||| Sbjct: 92405 cctctccacctccacctccacctcc 92381
>dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0054F02 Length = 180651 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 cctctccatctccacctccacctcc 38 |||||||| |||||||||||||||| Sbjct: 29446 cctctccacctccacctccacctcc 29422
>dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1172G12 Length = 171974 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 cctctccatctccacctccacctcc 38 |||||||| |||||||||||||||| Sbjct: 88230 cctctccacctccacctccacctcc 88206
>dbj|AK120323.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057K06, full insert sequence Length = 4535 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 14 cctctccatctccacctccacctcc 38 |||||||| |||||||||||||||| Sbjct: 60 cctctccacctccacctccacctcc 84
>gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69 of 73 of the complete sequence Length = 598988 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 17 ctccatctccacctccacctccagc 41 ||||| ||||||||||||||||||| Sbjct: 260948 ctccacctccacctccacctccagc 260972
>gb|AE002611.5| Drosophila melanogaster chromosome X, section 66 of 74 of the complete sequence Length = 297848 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 tctccatctccacctccacct 36 ||||||||||||||||||||| Sbjct: 132751 tctccatctccacctccacct 132771 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||||||||| ||||||||||| Sbjct: 132745 tctccatctccatctccacctcca 132768
>dbj|AP006240.1| Homo sapiens genomic DNA, chromosome 3, clone:RP11-359D8, complete sequence Length = 193414 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 ctccatctccacctccacctc 37 ||||||||||||||||||||| Sbjct: 129236 ctccatctccacctccacctc 129256
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 ccatctccacctccacctcca 39 ||||||||||||||||||||| Sbjct: 1212420 ccatctccacctccacctcca 1212440
>gb|AC122504.4| Mus musculus BAC clone RP24-419J13 from 9, complete sequence Length = 178896 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 tccatctccacctccacctcc 38 ||||||||||||||||||||| Sbjct: 143273 tccatctccacctccacctcc 143293
>emb|AL645586.9| Mouse DNA sequence from clone RP23-302O5 on chromosome X, complete sequence Length = 202500 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 15 ctctccatctccacctccacctcca 39 ||||||| ||||||||||||||||| Sbjct: 4323 ctctccacctccacctccacctcca 4347
>dbj|AP000494.1| Homo sapiens genomic DNA, chromosome 3p21.3, clone:301 to 308, anti-oncogene region, section 2/5 Length = 200000 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 ctccatctccacctccacctc 37 ||||||||||||||||||||| Sbjct: 126371 ctccatctccacctccacctc 126391
>ref|NM_001037031.1| Arabidopsis thaliana ATSIZ1; DNA binding / protein binding / zinc ion binding AT5G60410 (ATSIZ1) transcript variant AT5G60410.3 mRNA, complete cds Length = 3013 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 catctccacctccacctcca 39 |||||||||||||||||||| Sbjct: 1262 catctccacctccacctcca 1243
>ref|NM_203240.1| Arabidopsis thaliana ATSIZ1; DNA binding / protein binding / zinc ion binding AT5G60410 (ATSIZ1) transcript variant AT5G60410.2 mRNA, complete cds Length = 3195 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 catctccacctccacctcca 39 |||||||||||||||||||| Sbjct: 1262 catctccacctccacctcca 1243
>ref|NM_001037032.1| Arabidopsis thaliana ATSIZ1; DNA binding / protein binding / zinc ion binding AT5G60410 (ATSIZ1) transcript variant AT5G60410.4 mRNA, complete cds Length = 3145 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 catctccacctccacctcca 39 |||||||||||||||||||| Sbjct: 1262 catctccacctccacctcca 1243
>ref|NM_125434.2| Arabidopsis thaliana ATSIZ1; DNA binding / protein binding / zinc ion binding AT5G60410 (ATSIZ1) transcript variant AT5G60410.1 mRNA, complete cds Length = 3335 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 catctccacctccacctcca 39 |||||||||||||||||||| Sbjct: 1262 catctccacctccacctcca 1243
>ref|NM_105360.1| Arabidopsis thaliana unknown protein AT1G66890 mRNA, complete cds Length = 557 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 cctctccatctccacctcca 33 |||||||||||||||||||| Sbjct: 365 cctctccatctccacctcca 346
>gb|AC152925.1| Tribolium castaneum BAC T.cast_C17P12 (Clemson University Genomics Institute Tribolium castaneum BAC Library (Red Flour Beetle)) complete sequence Length = 50240 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 tccatctccacctccacctccagc 41 |||| ||||||||||||||||||| Sbjct: 28177 tccacctccacctccacctccagc 28200
>ref|NM_187568.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 582 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 tctccatctccacctccacctcca 39 |||||||||||| ||||||||||| Sbjct: 301 tctccatctccaactccacctcca 278
>ref|XM_478912.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2237 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 catctccacctccacctcca 39 |||||||||||||||||||| Sbjct: 28 catctccacctccacctcca 9 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 tctccatctccacctccacctcca 39 |||||| ||||||||||||||||| Sbjct: 26 tctccacctccacctccacctcca 3
>ref|NM_185813.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1443 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 ctctccatctccacctccacctcc 38 ||||||||||||||| |||||||| Sbjct: 329 ctctccatctccaccaccacctcc 306
>ref|NM_024147.1| Rattus norvegicus Ena-vasodilator stimulated phosphoprotein (Evl), mRNA Length = 1854 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 ctccatctccacctccacctccag 40 ||||| |||||||||||||||||| Sbjct: 757 ctccacctccacctccacctccag 780
>ref|NM_139129.1| Mus musculus coronin, actin binding protein 6 (Coro6), transcript variant C, mRNA Length = 1296 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cacctccacctccagcctcc 45 |||||||||||||||||||| Sbjct: 172 cacctccacctccagcctcc 153
>ref|NM_139130.1| Mus musculus coronin, actin binding protein 6 (Coro6), transcript variant B, mRNA Length = 1416 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cacctccacctccagcctcc 45 |||||||||||||||||||| Sbjct: 172 cacctccacctccagcctcc 153
>ref|NM_139128.1| Mus musculus coronin, actin binding protein 6 (Coro6), transcript variant A, mRNA Length = 1416 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cacctccacctccagcctcc 45 |||||||||||||||||||| Sbjct: 172 cacctccacctccagcctcc 153
>gb|AY700572.1| Arabidopsis thaliana SUMO E3 ligase (SIZ1) mRNA, complete cds Length = 3347 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 catctccacctccacctcca 39 |||||||||||||||||||| Sbjct: 1263 catctccacctccacctcca 1244
>gb|AC005714.11| Drosophila melanogaster clone BACR48M13, complete sequence Length = 177736 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 tccatctccacctccacctccagc 41 |||||||||||||||| ||||||| Sbjct: 123674 tccatctccacctccatctccagc 123697
>gb|AC012164.12| Drosophila melanogaster clone BACR14D22, complete sequence Length = 169385 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 catctccacctccacctcca 39 |||||||||||||||||||| Sbjct: 92599 catctccacctccacctcca 92618
>gb|AC115722.12| Mus musculus chromosome 5, clone RP23-16N23, complete sequence Length = 194380 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 cctctccatctccacctccacctc 37 ||||||||||||||||||| |||| Sbjct: 147809 cctctccatctccacctccccctc 147832
>gb|AC131728.4| Mus musculus BAC clone RP23-122G5 from chromosome 5, complete sequence Length = 211796 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 ctccacctccacctccagcc 42 |||||||||||||||||||| Sbjct: 63845 ctccacctccacctccagcc 63826
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||||||||| ||||||||||| Sbjct: 1105288 tctccatctccaactccacctcca 1105311
>gb|AC004851.2| Homo sapiens PAC clone RP4-665P5 from 7, complete sequence Length = 71627 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cacctccacctccagcctcc 45 |||||||||||||||||||| Sbjct: 45010 cacctccacctccagcctcc 44991
>ref|XM_989321.1| PREDICTED: Mus musculus transformation/transcription domain-associated protein, transcript variant 7 (Trrap), mRNA Length = 12476 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ctccacctccacctccagcc 42 |||||||||||||||||||| Sbjct: 1643 ctccacctccacctccagcc 1662
>ref|XM_989265.1| PREDICTED: Mus musculus transformation/transcription domain-associated protein, transcript variant 6 (Trrap), mRNA Length = 12883 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ctccacctccacctccagcc 42 |||||||||||||||||||| Sbjct: 2101 ctccacctccacctccagcc 2120
>ref|XM_899741.2| PREDICTED: Mus musculus transformation/transcription domain-associated protein, transcript variant 3 (Trrap), mRNA Length = 12476 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ctccacctccacctccagcc 42 |||||||||||||||||||| Sbjct: 1643 ctccacctccacctccagcc 1662
>ref|XM_891798.2| PREDICTED: Mus musculus transformation/transcription domain-associated protein, transcript variant 1 (Trrap), mRNA Length = 12883 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ctccacctccacctccagcc 42 |||||||||||||||||||| Sbjct: 2101 ctccacctccacctccagcc 2120
>ref|XM_918275.2| PREDICTED: Mus musculus transformation/transcription domain-associated protein, transcript variant 8 (Trrap), mRNA Length = 12441 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ctccacctccacctccagcc 42 |||||||||||||||||||| Sbjct: 1640 ctccacctccacctccagcc 1659
>ref|XM_754930.1| Ustilago maydis 521 hypothetical protein (UM03876.1) partial mRNA Length = 3294 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 aaccctagcctctccatctc 25 |||||||||||||||||||| Sbjct: 43 aaccctagcctctccatctc 62
>ref|XM_743251.1| Aspergillus fumigatus Af293 hexose transporter protein (Afu3g00220) partial mRNA Length = 1605 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 gacaagcgcaatgatgagat 464 |||||||||||||||||||| Sbjct: 1462 gacaagcgcaatgatgagat 1481
>ref|XM_387563.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07387.1) partial mRNA Length = 3177 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 aagcagcagcagccatggcgtctc 250 ||||||||||||||||||| |||| Sbjct: 2980 aagcagcagcagccatggcatctc 2957
>gb|AC126021.3| Mus musculus BAC clone RP24-386D8 from chromosome 18, complete sequence Length = 137484 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||| ||||||||||||||||| Sbjct: 100735 tctccacctccacctccacctcca 100758
>gb|AC091296.3| Pan troglodytes clone RP43-109G19, complete sequence Length = 185979 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 cacctccacctccagcctcc 45 |||||||||||||||||||| Sbjct: 82044 cacctccacctccagcctcc 82063
>gb|AC116996.3| Mus musculus BAC clone RP23-6B22 from 15, complete sequence Length = 229669 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 tctccatctccacctccacctcca 39 ||||| |||||||||||||||||| Sbjct: 187817 tctccttctccacctccacctcca 187794 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 tctccatctccacctccacctcca 39 |||||| ||||||||||||||||| Sbjct: 187811 tctccacctccacctccacctcca 187788
>gb|AC114916.5| Mus musculus BAC clone RP23-68E10 from 15, complete sequence Length = 207411 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||| ||||||||||||||||| Sbjct: 157565 tctccacctccacctccacctcca 157588 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 ||||| |||||||||||||||||| Sbjct: 157559 tctccttctccacctccacctcca 157582
>gb|AC115737.9| Mus musculus chromosome 3, clone RP23-473G18, complete sequence Length = 179034 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 17 ctccatctccacctccacctccagcctc 44 ||||| ||||||||||||||||| |||| Sbjct: 88889 ctccacctccacctccacctccaccctc 88916
>gb|AC147434.12| Medicago truncatula clone mth2-28h7, complete sequence Length = 127300 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 accctagcctctccatctcc 26 |||||||||||||||||||| Sbjct: 101735 accctagcctctccatctcc 101754
>gb|BC100532.1| Mus musculus cDNA clone IMAGE:30292778, **** WARNING: chimeric clone **** Length = 1113 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cacctccacctccagcctcc 45 |||||||||||||||||||| Sbjct: 545 cacctccacctccagcctcc 526
>emb|AL449363.12| Human DNA sequence from clone CTA-444M12 on chromosome 6 Contains the 5' part of the SLC2A12 gene for solute carrier family 2 (facilitated glucose transporter) member 12 and a high-mobility group (nonhistone chromosomal) protein variants I and Y (HMGIY) pseudogene, complete sequence Length = 141289 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 17 ctccatctccacctccacctccag 40 ||||| |||||||||||||||||| Sbjct: 7212 ctccacctccacctccacctccag 7189
>emb|AL035406.25|HS233K16 Human DNA sequence from clone RP1-233K16 on chromosome 1p36.21-36.33 Contains the 5' end of the NPHP4 gene for nephronophthisis 4, the KCNAB2 gene for potassium voltage-gated channel, shaker-related subfamily, beta member 2, the 3' end of the CHD5 gene for chromodomain helicase DNA binding protein 5 and a CpG island, complete sequence Length = 161651 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ctccatctccacctccacct 36 |||||||||||||||||||| Sbjct: 130762 ctccatctccacctccacct 130781
>emb|AL021392.5|HS439F8 Human DNA sequence from clone RP3-439F8 on chromosome 22q13.31-33, complete sequence Length = 120206 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 17 ctccatctccacctccacctccag 40 ||||| |||||||||||||||||| Sbjct: 16983 ctccacctccacctccacctccag 16960
>ref|XM_789719.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC590102 (LOC590102), partial mRNA Length = 3638 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 280 gaggaggatgtggacgagatcgag 303 |||||||||| ||||||||||||| Sbjct: 739 gaggaggatgaggacgagatcgag 762
>emb|X82257.1|DMH33A D.melanogaster mRNA for histone H3.3 variant Length = 772 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 tctccacctccacctccagc 41 |||||||||||||||||||| Sbjct: 614 tctccacctccacctccagc 595
>emb|X59995.1|PTGWIN62B P.trichocarpa chitinase gene gwin6.2b, chiX pseudogene and gwin6.2c gene 5'-region Length = 7305 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tctccatctccacctccacc 35 |||||||||||||||||||| Sbjct: 7175 tctccatctccacctccacc 7156
>emb|AL607072.15| Mouse DNA sequence from clone RP23-81E16 on chromosome 11 Contains the 3' end of the Ssh2 gene for slingshot homolog 2 (Drosophila), the Coro6 gene for coronin actin binding protein 6, a novel gene, the Git1 gene for G protein-coupled receptor kinase-interactor 1 and the 3' end of a novel gene, complete sequence Length = 90029 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cacctccacctccagcctcc 45 |||||||||||||||||||| Sbjct: 45701 cacctccacctccagcctcc 45682
>emb|AL606621.3|OSJN00054 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072K14, complete sequence Length = 139855 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 tctccacctccacctccagc 41 |||||||||||||||||||| Sbjct: 24866 tctccacctccacctccagc 24885
>gb|AY139752.1| Arabidopsis thaliana AT5g60420/muf9_70 mRNA, complete cds Length = 3325 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 catctccacctccacctcca 39 |||||||||||||||||||| Sbjct: 1261 catctccacctccacctcca 1242
>gb|AC104054.6| Drosophila melanogaster X BAC RP98-21G11 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170347 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 tctccatctccacctccacctcca 39 |||||||| ||||||||||||||| Sbjct: 40851 tctccatccccacctccacctcca 40828
>gb|AC022780.19| Mus musculus chromosome 11, clone RP23-179C3, complete sequence Length = 237498 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 cacctccacctccagcctcc 45 |||||||||||||||||||| Sbjct: 64982 cacctccacctccagcctcc 65001
>gb|AC105363.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1705B08, complete sequence Length = 100986 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||||||||| ||||||||||| Sbjct: 8992 tctccatctccaactccacctcca 9015
>tpg|BK002975.1| TPA: TPA_inf: Drosophila melanogaster HDC17108 (HDC17108) gene, complete cds Length = 3949 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 tctccatctccacctccacctcca 39 |||||||| ||||||||||||||| Sbjct: 3803 tctccatccccacctccacctcca 3780
>tpg|BK003620.1| TPA: TPA_inf: Drosophila melanogaster HDC04083 (HDC04083) gene, complete cds Length = 510 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 tccatctccacctccacctccagc 41 |||||||||||||||| ||||||| Sbjct: 104 tccatctccacctccatctccagc 127
>dbj|AK023790.1| Homo sapiens cDNA FLJ13728 fis, clone PLACE3000119 Length = 3877 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 6 aaccctagcctctccatctccacc 29 ||||| |||||||||||||||||| Sbjct: 2626 aacccaagcctctccatctccacc 2603
>gb|AC084880.12| Homo sapiens 12 BAC RP11-64B16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 110001 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cctctccatctccacctcca 33 |||||||||||||||||||| Sbjct: 94843 cctctccatctccacctcca 94862
>gb|AC079845.31| Mus musculus clone rp23-461a12, complete sequence Length = 206117 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 ccatctccacctccacctcc 38 |||||||||||||||||||| Sbjct: 41791 ccatctccacctccacctcc 41772
>dbj|AK147241.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:M5C1001G13 product:Transformation/transcription domain-associated protein (Tra1 homolog) homolog [Mus musculus], full insert sequence Length = 12480 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ctccacctccacctccagcc 42 |||||||||||||||||||| Sbjct: 1643 ctccacctccacctccagcc 1662
>dbj|AK158179.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched library, clone:F930038G16 product:coronin, actin binding protein 6, full insert sequence Length = 884 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cacctccacctccagcctcc 45 |||||||||||||||||||| Sbjct: 364 cacctccacctccagcctcc 345
>gb|AC093575.2| Homo sapiens chromosome 1 clone RP11-40C18, complete sequence Length = 159238 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 ccatctccacctccacctcc 38 |||||||||||||||||||| Sbjct: 73135 ccatctccacctccacctcc 73154
>dbj|AK220973.1| Arabidopsis thaliana mRNA for putative protein, complete cds, clone: RAFL22-57-E16 Length = 3022 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 catctccacctccacctcca 39 |||||||||||||||||||| Sbjct: 1262 catctccacctccacctcca 1243
>dbj|AK220890.1| Arabidopsis thaliana mRNA for putative protein, complete cds, clone: RAFL22-45-I11 Length = 3230 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 catctccacctccacctcca 39 |||||||||||||||||||| Sbjct: 1262 catctccacctccacctcca 1243
>dbj|AK221292.1| Arabidopsis thaliana mRNA for putative protein, complete cds, clone: RAFL24-23-F18 Length = 3347 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 catctccacctccacctcca 39 |||||||||||||||||||| Sbjct: 1262 catctccacctccacctcca 1243
>dbj|AK221249.1| Arabidopsis thaliana mRNA for putative protein, complete cds, clone: RAFL24-04-M04 Length = 3164 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 catctccacctccacctcca 39 |||||||||||||||||||| Sbjct: 1262 catctccacctccacctcca 1243
>dbj|AK221190.1| Arabidopsis thaliana mRNA for putative protein, complete cds, clone: RAFL22-99-L04 Length = 3022 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 catctccacctccacctcca 39 |||||||||||||||||||| Sbjct: 1262 catctccacctccacctcca 1243
>gb|AC152060.3| Mus musculus BAC clone RP23-430C3 from chromosome 18, complete sequence Length = 198600 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||| ||||||||||||||||| Sbjct: 12303 tctccacctccacctccacctcca 12326
>gb|AC159192.2| Mus musculus BAC clone RP24-121M18 from chromosome 13, complete sequence Length = 180418 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 ccatctccacctccacctcc 38 |||||||||||||||||||| Sbjct: 74791 ccatctccacctccacctcc 74772
>gb|AC008093.4|AC008093 Drosophila melanogaster, chromosome 3R, region 84F-84F, BAC clone BACR07M14, complete sequence Length = 181950 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||||||||||||||| ||||| Sbjct: 898 tctccatctccacctccaactcca 921
>gb|AC008349.2|AC008349 Drosophila melanogaster, chromosome 2R, region 58E-58E, BAC clone BACR01E01, complete sequence Length = 173373 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 tccatctccacctccacctccagc 41 |||||||||||||||| ||||||| Sbjct: 733 tccatctccacctccatctccagc 756
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||||||||| ||||||||||| Sbjct: 1105286 tctccatctccaactccacctcca 1105309
>gb|AC026951.5|AC026951 Homo sapiens chromosome 15, clone RP11-456J20, complete sequence Length = 206590 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tctccatctccacctccacc 35 |||||||||||||||||||| Sbjct: 81215 tctccatctccacctccacc 81196
>gb|AC007755.6|AC007755 Drosophila melanogaster, chromosome 3R, region 89A-89B, BAC clone BACR04C07, complete sequence Length = 173660 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 tctccatctccacctccacctcca 39 |||||||||||| ||||||||||| Sbjct: 54397 tctccatctccatctccacctcca 54374
>gb|AC007726.7|AC007726 Drosophila melanogaster, chromosome 3R, region 89B-89B, BAC clone BACR05C20, complete sequence Length = 177278 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||||||||| ||||||||||| Sbjct: 27336 tctccatctccatctccacctcca 27359
>gb|AC008313.3|AC008313 Drosophila melanogaster, chromosome 3R, region 84D-84E, BAC clone BACR11D12, complete sequence Length = 189596 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||||||||||||||| ||||| Sbjct: 170301 tctccatctccacctccaactcca 170324
>gb|AC072062.3| Homo sapiens BAC clone RP11-548N17 from 2, complete sequence Length = 219399 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 ctccatctccacctccacctccag 40 ||||| |||||||||||||||||| Sbjct: 154891 ctccaactccacctccacctccag 154914
>gb|AC083891.4|AC083891 Arabidopsis thaliana chromosome 1 BAC T4O24 genomic sequence, complete sequence Length = 35116 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cctctccatctccacctcca 33 |||||||||||||||||||| Sbjct: 28296 cctctccatctccacctcca 28315
>gb|AC010886.10| Homo sapiens BAC clone RP11-370K6 from 2, complete sequence Length = 158787 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 tctccatctccacctccacctcca 39 ||||||||||||||||| |||||| Sbjct: 61981 tctccatctccacctccccctcca 61958
>gb|AC116553.2| Homo sapiens chromosome 16 clone RP11-43P5, complete sequence Length = 173692 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ctctccatctccacctccac 34 |||||||||||||||||||| Sbjct: 71841 ctctccatctccacctccac 71860
>gb|BT004542.1| Arabidopsis thaliana AT5g60420/muf9_70 gene, complete cds Length = 2622 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 catctccacctccacctcca 39 |||||||||||||||||||| Sbjct: 1024 catctccacctccacctcca 1005
>gb|AC090695.14| Homo sapiens chromosome 15, clone RP11-192M23, complete sequence Length = 173632 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 catctccacctccacctcca 39 |||||||||||||||||||| Sbjct: 155281 catctccacctccacctcca 155262 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 tctccatctccacctccacctcca 39 |||||| ||||||||||||||||| Sbjct: 155279 tctccacctccacctccacctcca 155256
>gb|AY088507.1| Arabidopsis thaliana clone 7343 mRNA, complete sequence Length = 550 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 cctctccatctccacctcca 33 |||||||||||||||||||| Sbjct: 358 cctctccatctccacctcca 339
>gb|AC015936.14| Homo sapiens chromosome 17, clone CTD-2534I21, complete sequence Length = 203401 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 6 aaccctagcctctccatctccacc 29 ||||| |||||||||||||||||| Sbjct: 42890 aacccaagcctctccatctccacc 42913
>ref|XM_579484.1| PREDICTED: Rattus norvegicus Ena-vasodilator stimulated phosphoprotein (Evl), mRNA Length = 1618 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 ctccatctccacctccacctccag 40 ||||| |||||||||||||||||| Sbjct: 536 ctccacctccacctccacctccag 559
>gb|AC118980.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1263H11, complete sequence Length = 126827 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||||||||| ||||||||||| Sbjct: 125503 tctccatctccaactccacctcca 125526
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cacctccacctccagcctcc 45 |||||||||||||||||||| Sbjct: 8773 cacctccacctccagcctcc 8754
>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0406F06 Length = 144533 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 ctctccatctccacctccacctcc 38 ||||||||||||||| |||||||| Sbjct: 121082 ctctccatctccaccaccacctcc 121059
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 24 tccacctccacctccagcctccgcgcctccgc 55 ||||||||| |||||||||||| |||| |||| Sbjct: 534708 tccacctccccctccagcctccccgcccccgc 534677
>dbj|AP004328.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1616_B03 Length = 96081 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||| ||||||||||||||||| Sbjct: 93692 tctccacctccacctccacctcca 93715
>dbj|AK176104.1| Arabidopsis thaliana mRNA for putative protein, complete cds, clone: RAFL22-88-O13 Length = 3230 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 catctccacctccacctcca 39 |||||||||||||||||||| Sbjct: 1262 catctccacctccacctcca 1243
>dbj|AK175813.1| Arabidopsis thaliana mRNA for putative protein, complete cds, clone: RAFL22-41-D11 Length = 3022 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 catctccacctccacctcca 39 |||||||||||||||||||| Sbjct: 1262 catctccacctccacctcca 1243
>dbj|AP004871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0419H03 Length = 129020 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ctccacctccacctccagcc 42 |||||||||||||||||||| Sbjct: 101966 ctccacctccacctccagcc 101985
>dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1103G11 Length = 182931 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 ctccacctccacctccagcc 42 |||||||||||||||||||| Sbjct: 45999 ctccacctccacctccagcc 46018
>dbj|AP005296.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1720_F04 Length = 105227 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 ctctccatctccacctccacctcc 38 ||||||||||||||| |||||||| Sbjct: 3503 ctctccatctccaccaccacctcc 3480
>dbj|AP003747.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1127_E01 Length = 123787 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 catctccacctccacctcca 39 |||||||||||||||||||| Sbjct: 84298 catctccacctccacctcca 84279 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 tctccatctccacctccacctcca 39 |||||| ||||||||||||||||| Sbjct: 84296 tctccacctccacctccacctcca 84273
>dbj|AB011483.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUF9 Length = 77298 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 catctccacctccacctcca 39 |||||||||||||||||||| Sbjct: 19055 catctccacctccacctcca 19036
>dbj|AK026020.1| Homo sapiens cDNA: FLJ22367 fis, clone HRC06627 Length = 2630 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 cacctccacctccagcctcc 45 |||||||||||||||||||| Sbjct: 1314 cacctccacctccagcctcc 1333
>dbj|AK102803.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108G13, full insert sequence Length = 2237 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 catctccacctccacctcca 39 |||||||||||||||||||| Sbjct: 28 catctccacctccacctcca 9 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 tctccatctccacctccacctcca 39 |||||| ||||||||||||||||| Sbjct: 26 tctccacctccacctccacctcca 3
>dbj|AK070517.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056A13, full insert sequence Length = 1131 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 tctccatctccacctccacctcca 39 |||||||||||| ||||||||||| Sbjct: 510 tctccatctccaactccacctcca 487
>ref|NM_001039145.1| Homo sapiens Williams-Beuren syndrome chromosome region 23 (WBSCR23), mRNA Length = 2630 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 cacctccacctccagcctcc 45 |||||||||||||||||||| Sbjct: 1314 cacctccacctccagcctcc 1333
>gb|AY110301.1| Zea mays CL15090_1 mRNA sequence Length = 861 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 ||||||||||||| |||||||||| Sbjct: 385 tctccatctccacgtccacctcca 408
>gb|AY106384.1| Zea mays PCO086002 mRNA sequence Length = 924 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||| ||||||||||||||||| Sbjct: 146 tctccacctccacctccacctcca 169
>gb|AE003711.3| Drosophila melanogaster chromosome 3R, section 49 of 118 of the complete sequence Length = 236475 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||||||||| ||||||||||| Sbjct: 118810 tctccatctccatctccacctcca 118833
>gb|AE003676.4| Drosophila melanogaster chromosome 3R, section 14 of 118 of the complete sequence Length = 267607 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tctccatctccacctccacctcca 39 |||||||||||||||||| ||||| Sbjct: 246840 tctccatctccacctccaactcca 246863
>gb|AE003509.5| Drosophila melanogaster chromosome X, section 61 of 74 of the complete sequence Length = 315109 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 catctccacctccacctcca 39 |||||||||||||||||||| Sbjct: 294621 catctccacctccacctcca 294602
>gb|AE003457.4| Drosophila melanogaster chromosome 2R, section 65 of 73 of the complete sequence Length = 307324 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 tccatctccacctccacctccagc 41 |||||||||||||||| ||||||| Sbjct: 158677 tccatctccacctccatctccagc 158700
>gb|AE003424.2| Drosophila melanogaster chromosome X, section 8 of 74 of the complete sequence Length = 274777 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 tctccatctccacctccacctcca 39 |||||||| ||||||||||||||| Sbjct: 76181 tctccatccccacctccacctcca 76158
>gb|AC079832.18| Mus musculus strain C57BL/6J chromosome 3 clone rp23-393j8, complete sequence Length = 194354 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 ccatctccacctccacctcc 38 |||||||||||||||||||| Sbjct: 41784 ccatctccacctccacctcc 41765
>gb|U55787.1|BVU55787 Bluetongue virus strain 11UC8 VP6 (S3) gene, complete cds Length = 1049 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 20 catctccacctccacctccagcct 43 ||||||||||||| |||||||||| Sbjct: 367 catctccacctcctcctccagcct 344
>gb|U70211.1|RNU70211 Rattus norvegicus RNB6 mRNA, complete cds Length = 1854 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 ctccatctccacctccacctccag 40 ||||| |||||||||||||||||| Sbjct: 757 ctccacctccacctccacctccag 780
>emb|AL929577.9| Mouse DNA sequence from clone RP23-455B1 on chromosome 4, complete sequence Length = 152910 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 caagcagcagcagccatggc 245 |||||||||||||||||||| Sbjct: 145042 caagcagcagcagccatggc 145061
>emb|CT573216.1| Medicago truncatula chromosome 5 clone mte1-79f1, COMPLETE SEQUENCE Length = 117869 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 catctccacctccacctcca 39 |||||||||||||||||||| Sbjct: 10983 catctccacctccacctcca 11002
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 24 tccacctccacctccagcctccgcgcctccgc 55 ||||||||| |||||||||||| |||| |||| Sbjct: 185214 tccacctccccctccagcctccccgcccccgc 185183
>gb|AC149591.5| Mus musculus BAC clone RP23-332I9 from 18, complete sequence Length = 231381 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 tctccatctccacctccacctcca 39 |||||| ||||||||||||||||| Sbjct: 27828 tctccacctccacctccacctcca 27805
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 agcctctccatctccacctc 31 |||||||||||||||||||| Sbjct: 331428 agcctctccatctccacctc 331447
>emb|AL133505.2|DMBH59J11 Drosophila melanogaster BAC clone BACH59J11 Length = 19365 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 tctccatctccacctccacctcca 39 |||||||| ||||||||||||||| Sbjct: 3778 tctccatccccacctccacctcca 3755
>gb|M18093.1|PHVHRGPA P.vulgaris hydroxyproline-rich glycoprotein (HRGP) mRNA, exon 2 Length = 1113 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 tctccatctccacctccacc 35 |||||||||||||||||||| Sbjct: 592 tctccatctccacctccacc 611
>dbj|AB036921.1| Chrysophrys major MIP mRNA for maturation-inducing protein, partial cds Length = 2662 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 18 tccatctccacctccacctccagc 41 |||| ||||||||||||||||||| Sbjct: 430 tccacctccacctccacctccagc 407
>dbj|AB070896.1| Mus musculus mRNA for clipin E/coronin 6 type C, complete cds Length = 1296 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cacctccacctccagcctcc 45 |||||||||||||||||||| Sbjct: 172 cacctccacctccagcctcc 153
>dbj|AB070895.1| Mus musculus mRNA for clipin E/coronin 6 type B, complete cds Length = 1416 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cacctccacctccagcctcc 45 |||||||||||||||||||| Sbjct: 172 cacctccacctccagcctcc 153
>dbj|AB070894.1| Mus musculus mRNA for clipin E/coronin 6 type A, complete cds Length = 1416 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cacctccacctccagcctcc 45 |||||||||||||||||||| Sbjct: 172 cacctccacctccagcctcc 153
>dbj|AB025195.1| Brevibacterium fuscum var. dextranlyticum dexG gene, dexT gene for isomaltotrio-dextranase precusor and tnpA gene, partial and complete cds Length = 4506 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 ggatctgaacctcatccgct 182 |||||||||||||||||||| Sbjct: 1829 ggatctgaacctcatccgct 1810 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,681,140 Number of Sequences: 3902068 Number of extensions: 4681140 Number of successful extensions: 118182 Number of sequences better than 10.0: 197 Number of HSP's better than 10.0 without gapping: 202 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 116157 Number of HSP's gapped (non-prelim): 1962 length of query: 478 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 456 effective length of database: 17,147,199,772 effective search space: 7819123096032 effective search space used: 7819123096032 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
