>VCOM_ADE02 (P03267) Minor core protein (Protein V) (pV)|
          Length = 369

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 9/61 (14%)
 Frame = +3

Query: 27  SHPRNPRR-----TVPRLLPS----PTRQANPRFRGGRTRWI*RGSSRRPSTTACSSLRR 179
           S PR PRR     T   LLP     P+    P +RG   R   R ++RR +TT     RR
Sbjct: 276 SAPRRPRRSRKYGTASALLPEYALHPSIAPTPGYRGYTYRPRRRATTRRRTTTGTRRRRR 335

Query: 180 R 182
           R
Sbjct: 336 R 336

>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 20/58 (34%), Positives = 26/58 (44%)
 Frame = +3

Query: 15  PVLQSHPRNPRRTVPRLLPSPTRQANPRFRGGRTRWI*RGSSRRPSTTACSSLRRRPS 188
           P  +  P   RRT PR +P P R    R  G R R   R S+    +++ SS  R  S
Sbjct: 313 PSPRRRPSPRRRTPPRRMPPPPRHRRSRSPGRRRR---RSSASLSGSSSSSSSSRSRS 367

>UXAC_MANSM (Q65V59) Uronate isomerase (EC 5.3.1.12) (Glucuronate isomerase)|
           (Uronic isomerase)
          Length = 467

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +2

Query: 68  SFPDATGESKVSRRSHALDLTRQLPAAVYYCL 163
           S  D T   ++SR   A+D   QLP  + YCL
Sbjct: 321 SIADRTFAEQLSRLLDAMDQNNQLPKTILYCL 352

>LEU1_STRCO (O31046) 2-isopropylmalate synthase (EC 2.3.3.13)|
           (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase)
          Length = 573

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +3

Query: 9   CNPVLQSHPRNPRRTVPRLLPSPTRQANPRFRGGRTRWI*RGSSRR 146
           C  V+ ++   P R +   LP+   ++ P     R  W+ R  SRR
Sbjct: 200 CEAVMDTYQPGPGREIILNLPATVERSTPSTHADRFEWMGRNLSRR 245

>PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) (ClaPEX6)|
          Length = 1388

 Score = 28.1 bits (61), Expect = 6.7
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 84   VASGKEAGEGRSV*GFWDGTGGPD 13
            V +GK  G+G++V GF DGT   D
Sbjct: 1361 VVNGKGKGKGKAVAGFQDGTASDD 1384

>PKNA_MYCTU (P65726) Probable serine/threonine-protein kinase pknA (EC|
           2.7.11.1)
          Length = 431

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 9/40 (22%)
 Frame = +2

Query: 20  PPVPSQKP*TDRPSPASFPDAT---------GESKVSRRS 112
           PP PSQ P   R +PA+ P  T         G +  SRRS
Sbjct: 280 PPRPSQTPPPGRAAPAAIPSGTTARVAANSAGRTAASRRS 319

>PKNA_MYCBO (P65727) Probable serine/threonine-protein kinase pknA (EC|
           2.7.11.1)
          Length = 431

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 9/40 (22%)
 Frame = +2

Query: 20  PPVPSQKP*TDRPSPASFPDAT---------GESKVSRRS 112
           PP PSQ P   R +PA+ P  T         G +  SRRS
Sbjct: 280 PPRPSQTPPPGRAAPAAIPSGTTARVAANSAGRTAASRRS 319

>SURE_HALSA (Q9HQB2) 5'-nucleotidase surE (EC 3.1.3.5) (Nucleoside|
           5'-monophosphate phosphohydrolase)
          Length = 258

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +2

Query: 59  SPASFPDATGESKVSRRSHALDLT 130
           +P    DATGE  V+R SHA D+T
Sbjct: 172 APHPDADATGEMVVTRPSHAYDMT 195


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,628,364
Number of Sequences: 219361
Number of extensions: 451336
Number of successful extensions: 1821
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1820
length of database: 80,573,946
effective HSP length: 39
effective length of database: 72,018,867
effective search space used: 1728452808
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)