ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl45d11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|M55604.1|WHTUBA1 T.aestivum ubiquitin activating enzyme E1 (U... 188 4e-45
2gb|M90663.1|WHTE1A Wheat ubiquitin activating enzyme (E1) mRNA, ... 127 1e-26
3dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.61
4dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.61
5dbj|AK111781.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.61
6gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 0.61
7gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 0.61
8emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa... 42 0.61
9emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa... 42 0.61
10emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa... 42 0.61
11gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 2.4
12ref|NM_020964.2| Homo sapiens KIAA1632 (KIAA1632), mRNA 40 2.4
13gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 2.4
14gb|AC154402.2| Mus musculus BAC clone RP24-235N24 from chromosom... 40 2.4
15gb|AC087685.9| Homo sapiens chromosome 18, clone RP11-618K16, co... 40 2.4
16emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 2.4
17dbj|AK094080.1| Homo sapiens cDNA FLJ36761 fis, clone UTERU2018884 40 2.4
18gb|AC090355.9| Homo sapiens chromosome 18, clone RP11-745C22, co... 40 2.4
19dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 2.4
20gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 2.4
21emb|CT009762.8| Mouse DNA sequence from clone RP23-211O9 on chro... 40 2.4
22dbj|AB028740.1| Mus musculus drba gene for drebrin A, partial cds 40 2.4
23gb|AY834397.1| Schistosoma mansoni IGF-I precursor-like gene, in... 38 9.5
24ref|XM_606988.2| PREDICTED: Bos taurus similar to Platelet glyco... 38 9.5
25gb|AY550488.1| Salmo salar clone Hae395 microsatellite sequence 38 9.5
26gb|AC132222.3| Mus musculus BAC clone RP24-549C2 from chromosome... 38 9.5
27ref|XM_538390.2| PREDICTED: Canis familiaris similar to Platelet... 38 9.5
28emb|AL591783.1|SME591783 Sinorhizobium meliloti 1021 complete ch... 38 9.5
29ref|XM_547014.1| PREDICTED: Canis familiaris similar to slit hom... 38 9.5
30gb|AC074389.8| Homo sapiens BAC clone RP11-510K8 from 7, complet... 38 9.5
31emb|BX640515.3| Human DNA sequence from clone WI2-8325B5 on chro... 38 9.5
32emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genom... 38 9.5
33emb|BX470161.8| Zebrafish DNA sequence from clone RP71-84I2, com... 38 9.5
34dbj|AK139462.1| Mus musculus 10 days neonate cortex cDNA, RIKEN ... 38 9.5
35gb|AC009335.10| Homo sapiens chromosome 17, clone RP11-20O2, com... 38 9.5
36gb|CP000264.1| Jannaschia sp. CCS1, complete genome 38 9.5
37ref|XM_689489.1| PREDICTED: Danio rerio similar to Tub-prov prot... 38 9.5
38dbj|AK002967.1| Mus musculus adult male brain cDNA, RIKEN full-l... 38 9.5
39dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.5
40gb|AC171016.2| Gallus gallus BAC clone CH261-29C12 from chromoso... 38 9.5
41dbj|AP005755.2| Oryza sativa (japonica cultivar-group) genomic D... 38 9.5
42gb|AC153962.3| Mus musculus 10 BAC RP24-347C6 (Roswell Park Canc... 38 9.5
43gb|AF065429.1|AF065429 Aeromonas punctata subsp. punctata prolyl... 38 9.5
44gb|AF143951.1|AF143951 Aeromonas punctata subsp. punctata prolyl... 38 9.5
45dbj|AB007125.1| Serratia marcescens slaA gene for surface layer ... 38 9.5 
>gb|M55604.1|WHTUBA1 T.aestivum ubiquitin activating enzyme E1 (UBA1) gene, complete cds
          Length = 3586

 Score =  188 bits (95), Expect = 4e-45
 Identities = 136/151 (90%), Gaps = 9/151 (5%)
 Strand = Plus / Plus

                                                                       
Query: 50  gaccgtccctcgcctgcttccttccccgacgcgacaggcgaatccaaggtttcgcggcgg 109
           ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 6   gaccgtcgctcgcctgcttccttcaccgacgcgacaggcgaatccaaggtttcgcggcgg 65

                                                                       
Query: 110 ---------tcgcacgcgctggatctgacgcggcagctcccggcggccgtctactactgc 160
                    | ||||||||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 66  ttgcggccctagcacgcgctggatctgacgcggcagctcccggcggccgcgtactactgc 125

                                          
Query: 161 ctgctcttcgctgcgtcggcggccgtcctcg 191
           ||||||||||||||||||||||| |||||||
Sbjct: 126 ctgctcttcgctgcgtcggcggctgtcctcg 156
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>gb|M90663.1|WHTE1A Wheat ubiquitin activating enzyme (E1) mRNA, complete cds
          Length = 3695

 Score =  127 bits (64), Expect = 1e-26
 Identities = 77/80 (96%), Gaps = 1/80 (1%)
 Strand = Plus / Plus

                                                                       
Query: 112 gcacgcgctggatctgacgcggcagctcccggcggccgtctactactgcctgctcttcgc 171
           ||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||
Sbjct: 174 gcacgcgctggatctgacgcg-cagctcccggcggccgcgtactactgcctgctcttcgc 232

                               
Query: 172 tgcgtcggcggccgtcctcg 191
           ||||||||||||||||||||
Sbjct: 233 tgcgtcggcggccgtcctcg 252



 Score = 79.8 bits (40), Expect = 3e-12
 Identities = 66/73 (90%), Gaps = 5/73 (6%)
 Strand = Plus / Plus

                                                                      
Query: 28 cccatcccagaaaccctagacggaccgtccctcgcctgctt-ccttccccgacgcgacag 86
          |||| ||||||||||||||||    |||| ||||||||||| ||||||||||||||||||
Sbjct: 8  cccagcccagaaaccctagac----cgtcgctcgcctgctttccttccccgacgcgacag 63

                       
Query: 87 gcgaatccaaggt 99
          |||||||||||||
Sbjct: 64 gcgaatccaaggt 76
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 0.61
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 119    ctggatctgacgcggcagctc 139
              |||||||||||||||||||||
Sbjct: 317350 ctggatctgacgcggcagctc 317330
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 0.61
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 119    ctggatctgacgcggcagctc 139
              |||||||||||||||||||||
Sbjct: 300382 ctggatctgacgcggcagctc 300362
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>dbj|AK111781.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083B12, full
           insert sequence
          Length = 3724

 Score = 42.1 bits (21), Expect = 0.61
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 119 ctggatctgacgcggcagctc 139
           |||||||||||||||||||||
Sbjct: 225 ctggatctgacgcggcagctc 245
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 0.61
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 119    ctggatctgacgcggcagctc 139
              |||||||||||||||||||||
Sbjct: 300382 ctggatctgacgcggcagctc 300362
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 0.61
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 119    ctggatctgacgcggcagctc 139
              |||||||||||||||||||||
Sbjct: 317350 ctggatctgacgcggcagctc 317330
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>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa
            from chromosome 11 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 160673

 Score = 42.1 bits (21), Expect = 0.61
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 119  ctggatctgacgcggcagctc 139
            |||||||||||||||||||||
Sbjct: 4611 ctggatctgacgcggcagctc 4631
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>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 152222

 Score = 42.1 bits (21), Expect = 0.61
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 119   ctggatctgacgcggcagctc 139
             |||||||||||||||||||||
Sbjct: 50401 ctggatctgacgcggcagctc 50381
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>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa
            from chromosome 11 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 164143

 Score = 42.1 bits (21), Expect = 0.61
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 119  ctggatctgacgcggcagctc 139
            |||||||||||||||||||||
Sbjct: 7700 ctggatctgacgcggcagctc 7680
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 94      caaggtttcgcggcggtcgc 113
               ||||||||||||||||||||
Sbjct: 1950645 caaggtttcgcggcggtcgc 1950626
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>ref|NM_020964.2| Homo sapiens KIAA1632 (KIAA1632), mRNA
          Length = 12715

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 150   tctactactgcctgctcttc 169
             ||||||||||||||||||||
Sbjct: 11976 tctactactgcctgctcttc 11995
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 94      caaggtttcgcggcggtcgc 113
               ||||||||||||||||||||
Sbjct: 1480472 caaggtttcgcggcggtcgc 1480491
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>gb|AC154402.2| Mus musculus BAC clone RP24-235N24 from chromosome 13, complete sequence
          Length = 145213

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     cctccagtcccatcccagaa 39
              ||||||||||||||||||||
Sbjct: 106545 cctccagtcccatcccagaa 106564
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>gb|AC087685.9| Homo sapiens chromosome 18, clone RP11-618K16, complete sequence
          Length = 155807

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 150   tctactactgcctgctcttc 169
             ||||||||||||||||||||
Sbjct: 39017 tctactactgcctgctcttc 39036
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 94      caaggtttcgcggcggtcgc 113
               ||||||||||||||||||||
Sbjct: 1367581 caaggtttcgcggcggtcgc 1367600
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>dbj|AK094080.1| Homo sapiens cDNA FLJ36761 fis, clone UTERU2018884
          Length = 3017

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 150  tctactactgcctgctcttc 169
            ||||||||||||||||||||
Sbjct: 2296 tctactactgcctgctcttc 2315
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>gb|AC090355.9| Homo sapiens chromosome 18, clone RP11-745C22, complete sequence
          Length = 186783

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 150   tctactactgcctgctcttc 169
             ||||||||||||||||||||
Sbjct: 17512 tctactactgcctgctcttc 17493
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 46    gacggaccgtccctcgcctg 65
             ||||||||||||||||||||
Sbjct: 86184 gacggaccgtccctcgcctg 86203
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 131     cggcagctcccggcggccgt 150
               ||||||||||||||||||||
Sbjct: 2129561 cggcagctcccggcggccgt 2129542
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>emb|CT009762.8| Mouse DNA sequence from clone RP23-211O9 on chromosome 13, complete
             sequence
          Length = 229171

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    cctccagtcccatcccagaa 39
             ||||||||||||||||||||
Sbjct: 58389 cctccagtcccatcccagaa 58370
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>dbj|AB028740.1| Mus musculus drba gene for drebrin A, partial cds
          Length = 20387

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    cctccagtcccatcccagaa 39
             ||||||||||||||||||||
Sbjct: 20315 cctccagtcccatcccagaa 20296
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>gb|AY834397.1| Schistosoma mansoni IGF-I precursor-like gene, intron 2
          Length = 265

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 30 catcccagaaaccctagac 48
          |||||||||||||||||||
Sbjct: 50 catcccagaaaccctagac 68
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>ref|XM_606988.2| PREDICTED: Bos taurus similar to Platelet glycoprotein V precursor
            (GPV) (CD42D) (LOC528562), mRNA
          Length = 2475

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  gccgtctactactgcctgc 164
            |||||||||||||||||||
Sbjct: 1240 gccgtctactactgcctgc 1258
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>gb|AY550488.1| Salmo salar clone Hae395 microsatellite sequence
          Length = 659

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 30  catcccagaaaccctagac 48
           |||||||||||||||||||
Sbjct: 145 catcccagaaaccctagac 127
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>gb|AC132222.3| Mus musculus BAC clone RP24-549C2 from chromosome 5, complete sequence
          Length = 173603

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 154   ctactgcctgctcttcgct 172
             |||||||||||||||||||
Sbjct: 88884 ctactgcctgctcttcgct 88866
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>ref|XM_538390.2| PREDICTED: Canis familiaris similar to Platelet glycoprotein V
            precursor (GPV) (CD42D) (LOC481269), mRNA
          Length = 2322

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  gccgtctactactgcctgc 164
            |||||||||||||||||||
Sbjct: 1108 gccgtctactactgcctgc 1126
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>emb|AL591783.1|SME591783 Sinorhizobium meliloti 1021 complete chromosome; segment 2/12
          Length = 306650

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 121  ggatctgacgcggcagctcccgg 143
            |||||||| ||||||||||||||
Sbjct: 9590 ggatctgaagcggcagctcccgg 9612
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>ref|XM_547014.1| PREDICTED: Canis familiaris similar to slit homolog 3 (LOC489895),
            mRNA
          Length = 2475

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 146  gccgtctactactgcctgc 164
            |||||||||||||||||||
Sbjct: 1300 gccgtctactactgcctgc 1318
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>gb|AC074389.8| Homo sapiens BAC clone RP11-510K8 from 7, complete sequence
          Length = 195782

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 146    gccgtctactactgcctgc 164
              |||||||||||||||||||
Sbjct: 140234 gccgtctactactgcctgc 140252
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>emb|BX640515.3| Human DNA sequence from clone WI2-8325B5 on chromosome 20, complete
            sequence
          Length = 18482

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 28   cccatcccagaaaccctag 46
            |||||||||||||||||||
Sbjct: 7517 cccatcccagaaaccctag 7499
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>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16
          Length = 345012

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 109    gtcgcacgcgctggatctg 127
              |||||||||||||||||||
Sbjct: 325832 gtcgcacgcgctggatctg 325814
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>emb|BX470161.8| Zebrafish DNA sequence from clone RP71-84I2, complete sequence
          Length = 197615

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 116    gcgctggatctgacgcggc 134
              |||||||||||||||||||
Sbjct: 169840 gcgctggatctgacgcggc 169822
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>dbj|AK139462.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length
           enriched library, clone:A830091P20 product:hypothetical
           protein, full insert sequence
          Length = 1828

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 58  ctcgcctgcttccttcccc 76
           |||||||||||||||||||
Sbjct: 355 ctcgcctgcttccttcccc 337
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>gb|AC009335.10| Homo sapiens chromosome 17, clone RP11-20O2, complete sequence
          Length = 159611

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 29    ccatcccagaaaccctaga 47
             |||||||||||||||||||
Sbjct: 42606 ccatcccagaaaccctaga 42624
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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 115     cgcgctggatctgacgcgg 133
               |||||||||||||||||||
Sbjct: 1383225 cgcgctggatctgacgcgg 1383243
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>ref|XM_689489.1| PREDICTED: Danio rerio similar to Tub-prov protein (LOC566221),
           mRNA
          Length = 942

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 159 gcctgctcttcgctgcgtc 177
           |||||||||||||||||||
Sbjct: 167 gcctgctcttcgctgcgtc 149
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>dbj|AK002967.1| Mus musculus adult male brain cDNA, RIKEN full-length enriched
           library, clone:0710001K08 product:unclassifiable, full
           insert sequence
          Length = 1707

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 58  ctcgcctgcttccttcccc 76
           |||||||||||||||||||
Sbjct: 471 ctcgcctgcttccttcccc 453
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 154      ctactgcctgctcttcgct 172
                |||||||||||||||||||
Sbjct: 17534901 ctactgcctgctcttcgct 17534883
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>gb|AC171016.2| Gallus gallus BAC clone CH261-29C12 from chromosome ul, complete sequence
          Length = 168140

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 19     tcctccagtcccatcccag 37
              |||||||||||||||||||
Sbjct: 109712 tcctccagtcccatcccag 109730
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>dbj|AP005755.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBb0019B14
          Length = 127570

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 154   ctactgcctgctcttcgct 172
             |||||||||||||||||||
Sbjct: 99079 ctactgcctgctcttcgct 99061
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>gb|AC153962.3| Mus musculus 10 BAC RP24-347C6 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 147491

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 58    ctcgcctgcttccttcccc 76
             |||||||||||||||||||
Sbjct: 35180 ctcgcctgcttccttcccc 35198
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>gb|AF065429.1|AF065429 Aeromonas punctata subsp. punctata prolyl endopeptidase gene,
            complete cds
          Length = 2349

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 125  ctgacgcggcagctcccgg 143
            |||||||||||||||||||
Sbjct: 2085 ctgacgcggcagctcccgg 2067
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>gb|AF143951.1|AF143951 Aeromonas punctata subsp. punctata prolyl endopeptidase gene,
            complete cds
          Length = 3294

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 125  ctgacgcggcagctcccgg 143
            |||||||||||||||||||
Sbjct: 2086 ctgacgcggcagctcccgg 2068
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>dbj|AB007125.1| Serratia marcescens slaA gene for surface layer protein, complete
            cds, isolate 8000
          Length = 4078

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 113  cacgcgctggatctgacgc 131
            |||||||||||||||||||
Sbjct: 2999 cacgcgctggatctgacgc 3017


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,046,481
Number of Sequences: 3902068
Number of extensions: 1046481
Number of successful extensions: 70375
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69417
Number of HSP's gapped (non-prelim): 955
length of query: 191
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 169
effective length of database: 17,147,199,772
effective search space: 2897876761468
effective search space used: 2897876761468
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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