ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl45d09 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 155 bits (78), Expect = 2e-34 Identities = 97/102 (95%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 353 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcgccgcgtcgccaccatgctg 412 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 644700 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 644759 Query: 413 ccgtggctcgtcct-ccgctcatcctcctctgggcgctctcc 453 || ||||| || || ||||||||||||||||||||||||||| Sbjct: 644760 ccatggctggtgctcccgctcatcctcctctgggcgctctcc 644801 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ggcctcggcagcggcggcgg 351 |||||||||||||||||||| Sbjct: 23724084 ggcctcggcagcggcggcgg 23724103
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 155 bits (78), Expect = 2e-34 Identities = 97/102 (95%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 353 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcgccgcgtcgccaccatgctg 412 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 608951 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 609010 Query: 413 ccgtggctcgtcct-ccgctcatcctcctctgggcgctctcc 453 || ||||| || || ||||||||||||||||||||||||||| Sbjct: 609011 ccatggctggtgctcccgctcatcctcctctgggcgctctcc 609052
>dbj|AK068644.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158J09, full insert sequence Length = 3185 Score = 155 bits (78), Expect = 2e-34 Identities = 97/102 (95%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 353 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcgccgcgtcgccaccatgctg 412 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 331 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 390 Query: 413 ccgtggctcgtcct-ccgctcatcctcctctgggcgctctcc 453 || ||||| || || ||||||||||||||||||||||||||| Sbjct: 391 ccatggctggtgctcccgctcatcctcctctgggcgctctcc 432
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 155 bits (78), Expect = 2e-34 Identities = 97/102 (95%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 353 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcgccgcgtcgccaccatgctg 412 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 608951 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 609010 Query: 413 ccgtggctcgtcct-ccgctcatcctcctctgggcgctctcc 453 || ||||| || || ||||||||||||||||||||||||||| Sbjct: 609011 ccatggctggtgctcccgctcatcctcctctgggcgctctcc 609052
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 155 bits (78), Expect = 2e-34 Identities = 97/102 (95%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 353 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcgccgcgtcgccaccatgctg 412 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 644700 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 644759 Query: 413 ccgtggctcgtcct-ccgctcatcctcctctgggcgctctcc 453 || ||||| || || ||||||||||||||||||||||||||| Sbjct: 644760 ccatggctggtgctcccgctcatcctcctctgggcgctctcc 644801 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ggcctcggcagcggcggcgg 351 |||||||||||||||||||| Sbjct: 23652275 ggcctcggcagcggcggcgg 23652294
>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 181322 Score = 155 bits (78), Expect = 2e-34 Identities = 97/102 (95%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 353 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcgccgcgtcgccaccatgctg 412 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 134021 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 133962 Query: 413 ccgtggctcgtcct-ccgctcatcctcctctgggcgctctcc 453 || ||||| || || ||||||||||||||||||||||||||| Sbjct: 133961 ccatggctggtgctcccgctcatcctcctctgggcgctctcc 133920
>emb|BX000510.1|CNS08CE0 Oryza sativa chromosome 12, . BAC OJ1769_D07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 115859 Score = 155 bits (78), Expect = 2e-34 Identities = 97/102 (95%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 353 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcgccgcgtcgccaccatgctg 412 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 4143 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 4084 Query: 413 ccgtggctcgtcct-ccgctcatcctcctctgggcgctctcc 453 || ||||| || || ||||||||||||||||||||||||||| Sbjct: 4083 ccatggctggtgctcccgctcatcctcctctgggcgctctcc 4042
>gb|AC091734.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0068A07, from Chromosome 10, complete sequence Length = 154505 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 228 cgccgcatcgcatcgcatcgcgtcg 252 ||||||||||||||||||||||||| Sbjct: 36948 cgccgcatcgcatcgcatcgcgtcg 36972
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 228 cgccgcatcgcatcgcatcgcgtcg 252 ||||||||||||||||||||||||| Sbjct: 12515523 cgccgcatcgcatcgcatcgcgtcg 12515547
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 228 cgccgcatcgcatcgcatcgcgtcg 252 ||||||||||||||||||||||||| Sbjct: 12522863 cgccgcatcgcatcgcatcgcgtcg 12522887
>gb|AC099012.1| Drosophila melanogaster, chromosome 2R, region 56F-57X, BAC clone BACR23F24, complete sequence Length = 183592 Score = 46.1 bits (23), Expect = 0.100 Identities = 23/23 (100%) Strand = Plus / Minus Query: 231 cgcatcgcatcgcatcgcgtcgc 253 ||||||||||||||||||||||| Sbjct: 80871 cgcatcgcatcgcatcgcgtcgc 80849
>gb|AC093097.1| Drosophila melanogaster, chromosome 2L, region 36A-36B, BAC clone BACR26O03, complete sequence Length = 175413 Score = 46.1 bits (23), Expect = 0.100 Identities = 23/23 (100%) Strand = Plus / Minus Query: 231 cgcatcgcatcgcatcgcgtcgc 253 ||||||||||||||||||||||| Sbjct: 66034 cgcatcgcatcgcatcgcgtcgc 66012
>gb|AC006214.1|AC006214 Drosophila melanogaster, chromosome 2L, region 36A7-36A13, P1 clones DS04680 and DS00592, complete sequence Length = 129779 Score = 46.1 bits (23), Expect = 0.100 Identities = 23/23 (100%) Strand = Plus / Minus Query: 231 cgcatcgcatcgcatcgcgtcgc 253 ||||||||||||||||||||||| Sbjct: 97943 cgcatcgcatcgcatcgcgtcgc 97921
>gb|AC103644.15| Mus musculus chromosome 7, clone RP24-361F3, complete sequence Length = 171338 Score = 46.1 bits (23), Expect = 0.100 Identities = 23/23 (100%) Strand = Plus / Plus Query: 194 tccctcccccctttcccctttcc 216 ||||||||||||||||||||||| Sbjct: 78196 tccctcccccctttcccctttcc 78218
>gb|AE003652.2| Drosophila melanogaster chromosome 2L, section 61 of 83 of the complete sequence Length = 262525 Score = 46.1 bits (23), Expect = 0.100 Identities = 23/23 (100%) Strand = Plus / Minus Query: 231 cgcatcgcatcgcatcgcgtcgc 253 ||||||||||||||||||||||| Sbjct: 77068 cgcatcgcatcgcatcgcgtcgc 77046
>gb|AE003793.3| Drosophila melanogaster chromosome 2R, section 57 of 73 of the complete sequence Length = 271902 Score = 46.1 bits (23), Expect = 0.100 Identities = 23/23 (100%) Strand = Plus / Minus Query: 231 cgcatcgcatcgcatcgcgtcgc 253 ||||||||||||||||||||||| Sbjct: 175132 cgcatcgcatcgcatcgcgtcgc 175110
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 46.1 bits (23), Expect = 0.100 Identities = 26/27 (96%) Strand = Plus / Plus Query: 324 cgggcgagggcctcggcagcggcggcg 350 |||||| |||||||||||||||||||| Sbjct: 1916098 cgggcgcgggcctcggcagcggcggcg 1916124
>gb|AC005286.1|AC005286 Drosophila melanogaster DNA sequence (P1s DS01995 (D179), DS03499 (D217), and DS08132 (D174)), complete sequence Length = 173970 Score = 46.1 bits (23), Expect = 0.100 Identities = 23/23 (100%) Strand = Plus / Minus Query: 231 cgcatcgcatcgcatcgcgtcgc 253 ||||||||||||||||||||||| Sbjct: 87245 cgcatcgcatcgcatcgcgtcgc 87223
>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence Length = 1608198 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 193 ttccctcccccctttccccttt 214 |||||||||||||||||||||| Sbjct: 604517 ttccctcccccctttccccttt 604496
>gb|AC104617.9| Trypanosoma brucei chromosome 5 clone RPCI93-1P6, complete sequence Length = 152664 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 193 ttccctcccccctttccccttt 214 |||||||||||||||||||||| Sbjct: 72755 ttccctcccccctttccccttt 72776
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 231 cgcatcgcatcgcatcgcgtcgccca 256 |||||||||||||||||| ||||||| Sbjct: 749837 cgcatcgcatcgcatcgcatcgccca 749862 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 cagcaagcaagcaagccgcc 278 |||||||||||||||||||| Sbjct: 20309207 cagcaagcaagcaagccgcc 20309188
>ref|XM_534709.2| PREDICTED: Canis familiaris similar to ring finger protein 10, transcript variant 1 (LOC477514), mRNA Length = 3745 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 331 gggcctcggcagcggcggcggtcgga 356 |||||||||| ||||||||||||||| Sbjct: 472 gggcctcggcggcggcggcggtcgga 447
>ref|XM_846239.1| PREDICTED: Canis familiaris similar to ring finger protein 10, transcript variant 2 (LOC477514), mRNA Length = 3856 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 331 gggcctcggcagcggcggcggtcgga 356 |||||||||| ||||||||||||||| Sbjct: 472 gggcctcggcggcggcggcggtcgga 447
>ref|XM_858411.1| PREDICTED: Canis familiaris similar to ring finger protein 10, transcript variant 6 (LOC477514), mRNA Length = 2141 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 331 gggcctcggcagcggcggcggtcgga 356 |||||||||| ||||||||||||||| Sbjct: 472 gggcctcggcggcggcggcggtcgga 447
>ref|XM_858395.1| PREDICTED: Canis familiaris similar to ring finger protein 10, transcript variant 5 (LOC477514), mRNA Length = 3671 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 331 gggcctcggcagcggcggcggtcgga 356 |||||||||| ||||||||||||||| Sbjct: 472 gggcctcggcggcggcggcggtcgga 447
>emb|AL079334.7|HSJ300O13 Human DNA sequence from clone RP1-300O13 on chromosome Xq22.1-24 Contains part of the AMMECR1 gene for Alport syndrome (mental retardation, midface hypoplasia and elliptocytosis, chromosomal region gene 1) (FLJ341111), complete sequence Length = 63660 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 191 gtttccctcccccctttcccctttcc 216 ||||||||| |||||||||||||||| Sbjct: 30900 gtttccctctcccctttcccctttcc 30925
>ref|XM_792634.1| PREDICTED: Strongylocentrotus purpuratus similar to RUN and TBC1 domain containing 2 (LOC593144), partial mRNA Length = 647 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 78 ctcctccgctcctcctccattc 99 |||||||||||||||||||||| Sbjct: 624 ctcctccgctcctcctccattc 603
>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29 Length = 291000 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 325 gggcgagggcctcggcagcggcggcg 350 ||||||||||||||||| |||||||| Sbjct: 289716 gggcgagggcctcggcaccggcggcg 289741
>emb|BX323543.11| Zebrafish DNA sequence from clone DKEYP-67E1 in linkage group 25, complete sequence Length = 181520 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 253 cccacccagcaagcaagcaagc 274 |||||||||||||||||||||| Sbjct: 122616 cccacccagcaagcaagcaagc 122637
>gb|AC109341.7| Homo sapiens chromosome 11, clone CTD-2504M7, complete sequence Length = 202761 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 116378 ccctctcttccttccatcccag 116357
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 226 gccgccgcatcgcatcgcatcg 247 |||||||||||||||||||||| Sbjct: 4662631 gccgccgcatcgcatcgcatcg 4662652
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 231 cgcatcgcatcgcatcgcgtcgccca 256 |||||||||||||||||| ||||||| Sbjct: 749835 cgcatcgcatcgcatcgcatcgccca 749860 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 cagcaagcaagcaagccgcc 278 |||||||||||||||||||| Sbjct: 20302236 cagcaagcaagcaagccgcc 20302217
>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090O10, complete sequence Length = 162132 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 231 cgcatcgcatcgcatcgcgtcgccca 256 |||||||||||||||||| ||||||| Sbjct: 45382 cgcatcgcatcgcatcgcatcgccca 45407
>gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0005F16, complete sequence Length = 160053 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 231 cgcatcgcatcgcatcgcgtcgccca 256 |||||||||||||||||| ||||||| Sbjct: 135718 cgcatcgcatcgcatcgcatcgccca 135743
>emb|BX647152.1|HSM807296 Homo sapiens mRNA; cDNA DKFZp686F03244 (from clone DKFZp686F03244) Length = 4374 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 639 ccctctcttccttccatcccag 618
>dbj|AK065925.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047E20, full insert sequence Length = 1801 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 231 cgcatcgcatcgcatcgcgtcgccca 256 |||||||||||||||||| ||||||| Sbjct: 46 cgcatcgcatcgcatcgcatcgccca 71
>gb|DQ298178.1| Gorilla gorilla isolate AG05251 TRIM5 alpha (TRIM5) gene, complete cds Length = 4978 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ298177.1| Pan troglodytes isolate GM03448 TRIM5 alpha (TRIM5) gene, complete cds Length = 4986 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301480.1| Homo sapiens voucher GM01805 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301479.1| Homo sapiens voucher GM00946 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301478.1| Homo sapiens voucher GM14492 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301477.1| Homo sapiens voucher GM01814 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301476.1| Homo sapiens voucher GM01806 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301475.1| Homo sapiens voucher GM09948 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301474.1| Homo sapiens voucher GM08428 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301473.1| Homo sapiens voucher GM01953 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301472.1| Homo sapiens voucher GM11524 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301471.1| Homo sapiens voucher GM11523 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301470.1| Homo sapiens voucher GM11522 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301469.1| Homo sapiens voucher NA17080 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301468.1| Homo sapiens voucher GM10978 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301467.1| Homo sapiens voucher GM10976 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301466.1| Homo sapiens voucher GM10975 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301465.1| Homo sapiens voucher GM10979 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301464.1| Homo sapiens voucher NA17311 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301463.1| Homo sapiens voucher NA17320 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301462.1| Homo sapiens voucher NA17310 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301461.1| Homo sapiens voucher NA17301 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301460.1| Homo sapiens voucher GM10969 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301459.1| Homo sapiens voucher GM10967 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301458.1| Homo sapiens voucher GM10965 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301457.1| Homo sapiens voucher GM10966 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301456.1| Homo sapiens voucher GM10968 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301455.1| Homo sapiens voucher NA13616 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301454.1| Homo sapiens voucher NA13597 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301453.1| Homo sapiens voucher GM11375 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301452.1| Homo sapiens voucher GM10539 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301451.1| Homo sapiens voucher GM10494 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301450.1| Homo sapiens voucher GM10493 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301449.1| Homo sapiens voucher GM10492 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301448.1| Homo sapiens voucher GM10473 TRIM5 (TRIM5) gene, complete cds Length = 4976 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301447.1| Homo sapiens voucher GM10472 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301446.1| Homo sapiens voucher GM10471 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301445.1| Homo sapiens voucher GM10470 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>gb|DQ301444.1| Homo sapiens voucher GM10469 TRIM5 (TRIM5) gene, complete cds Length = 4979 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatcccag 189 |||||||||||||||||||||| Sbjct: 449 ccctctcttccttccatcccag 428
>emb|AL808146.3| Mouse DNA sequence from clone RP23-52L10 on chromosome X, complete sequence Length = 159820 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 191 gtttccctcccccctttcccct 212 |||||||||||||||||||||| Sbjct: 3958 gtttccctcccccctttcccct 3979
>ref|XM_519369.1| PREDICTED: Pan troglodytes similar to mitogen-activated protein kinase kinase 2; mitogen-activated protein kinase kinase 2, p45; MAP kinase kinase 2; MAPK/ERK kinase 2; dual specificity mitogen-activated protein kinase kinase 2; ERK activator kinase 2 (LOC463716), mRNA Length = 1608 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 331 gggcctcggcagcggcggcgg 351 ||||||||||||||||||||| Sbjct: 706 gggcctcggcagcggcggcgg 726
>gb|AC142270.4| Mus musculus BAC clone RP24-115G23 from chromosome 3, complete sequence Length = 170870 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 194 tccctcccccctttcccctttccgccctc 222 |||||||| |||||||||||||| ||||| Sbjct: 97332 tccctccctcctttcccctttcctccctc 97304
>gb|AC146436.4| Pan troglodytes BAC clone RP43-16B7 from 7, complete sequence Length = 154982 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 ccctctcttccttccatccca 188 ||||||||||||||||||||| Sbjct: 31921 ccctctcttccttccatccca 31941
>emb|CR974468.5| Pig DNA sequence from clone PigE-178B21 on chromosome 7, complete sequence Length = 120695 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 tccctcccccctttccccttt 214 ||||||||||||||||||||| Sbjct: 76835 tccctcccccctttccccttt 76815
>gb|AC109805.8| Mus musculus chromosome 3, clone RP23-91D14, complete sequence Length = 171006 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 194 tccctcccccctttcccctttccgccctc 222 |||||||| |||||||||||||| ||||| Sbjct: 95444 tccctccctcctttcccctttcctccctc 95416
>gb|AC113299.14| Mus musculus chromosome 5, clone RP23-429P17, complete sequence Length = 214124 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 tttccctcccccctttcccct 212 ||||||||||||||||||||| Sbjct: 85922 tttccctcccccctttcccct 85942
>emb|AL162579.16| Human DNA sequence from clone RP11-421P21 on chromosome 6 Contains the 5' end of the PRIM2A gene for primase polypeptide 2A (58kD) and a CpG island, complete sequence Length = 64186 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 tctcttccttccatcccaggg 191 ||||||||||||||||||||| Sbjct: 50576 tctcttccttccatcccaggg 50596
>emb|AL596127.12| Mouse DNA sequence from clone RP23-297J14 on chromosome 11 Contains the 3' end of the Facl6 gene for fatty acid Coenzyme A ligase long chain 6, four novel genes, a ribosomal protein L35 (Rpl35) pseudogene, the 5' end of the gene for a novel protein similar to human PDZ domain containing guanine nucleotide exchange factor (GEF) 2 PDZGEF2 and three CpG islands, complete sequence Length = 198614 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 192 tttccctcccccctttcccctttcc 216 ||||||| ||||||||||||||||| Sbjct: 151485 tttcccttccccctttcccctttcc 151461
>gb|AC010008.5| Drosophila melanogaster 3L BAC RP98-13N15 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 158719 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 236 cgcatcgcatcgcgtcgcccacccagcaa 264 ||||||||||||| ||||||| ||||||| Sbjct: 21823 cgcatcgcatcgcatcgcccagccagcaa 21795
>gb|AC093436.2| Drosophila melanogaster 3L BAC RP98-1O14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163711 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 236 cgcatcgcatcgcgtcgcccacccagcaa 264 ||||||||||||| ||||||| ||||||| Sbjct: 54747 cgcatcgcatcgcatcgcccagccagcaa 54719
>gb|AC104625.2| Drosophila melanogaster X BAC RP98-48G8 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 172105 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 231 cgcatcgcatcgcatcgcgtc 251 ||||||||||||||||||||| Sbjct: 106713 cgcatcgcatcgcatcgcgtc 106733
>gb|AC023681.5| Drosophila melanogaster X BAC RP98-39P3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 153733 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 231 cgcatcgcatcgcatcgcgtc 251 ||||||||||||||||||||| Sbjct: 149206 cgcatcgcatcgcatcgcgtc 149226
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 214 tccgccctcaaagccgccgcatcgc 238 |||||||||||| |||||||||||| Sbjct: 1803741 tccgccctcaaatccgccgcatcgc 1803717
>gb|AC091223.2| Drosophila melanogaster 3L BAC RP98-48G6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170988 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 236 cgcatcgcatcgcgtcgcccacccagcaa 264 ||||||||||||| ||||||| ||||||| Sbjct: 168297 cgcatcgcatcgcatcgcccagccagcaa 168269
>ref|NR_002144.1| Homo sapiens mitogen-activated protein kinase kinase 2 pseudogene (LOC407835) on chromosome 7 Length = 1737 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 331 gggcctcggcagcggcggcgg 351 ||||||||||||||||||||| Sbjct: 35 gggcctcggcagcggcggcgg 55
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 78 ctcctccgctcctcctccattccca 102 ||||||||||||||| ||||||||| Sbjct: 3777524 ctcctccgctcctccgccattccca 3777500
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 222 caaagccgccgcatcgcatcgcatc 246 ||||||| ||||||||||||||||| Sbjct: 6935836 caaagccaccgcatcgcatcgcatc 6935812
>gb|AC011005.7|AC011005 Homo sapiens chromosome 7 clone RP11-286H14, complete sequence Length = 217615 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 331 gggcctcggcagcggcggcgg 351 ||||||||||||||||||||| Sbjct: 52034 gggcctcggcagcggcggcgg 52054
>gb|AF511152.1| Sus scrofa clone UMNp250 microsatellite sequence Length = 346 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 tccctcccccctttccccttt 214 ||||||||||||||||||||| Sbjct: 112 tccctcccccctttccccttt 92
>gb|AC018639.8|AC018639 Human Chromosome 7 clone RP11-128A6, complete sequence Length = 157579 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 331 gggcctcggcagcggcggcgg 351 ||||||||||||||||||||| Sbjct: 142584 gggcctcggcagcggcggcgg 142604
>dbj|AP004670.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0496D04 Length = 197358 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 78 ctcctccgctcctcctccattccca 102 ||||||||||||||| ||||||||| Sbjct: 16636 ctcctccgctcctccgccattccca 16612
>dbj|AP005522.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0479H10 Length = 139874 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 222 caaagccgccgcatcgcatcgcatc 246 ||||||| ||||||||||||||||| Sbjct: 125361 caaagccaccgcatcgcatcgcatc 125337
>dbj|AP005840.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0050F10 Length = 151986 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 78 ctcctccgctcctcctccattccca 102 ||||||||||||||| ||||||||| Sbjct: 121875 ctcctccgctcctccgccattccca 121851
>gb|AF205588.1|AF205588 Homo sapiens ZNF01 and HUMORFKG1B genes, partial sequence, complete sequence Length = 312283 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 192 tttccctcccccctttcccctttcc 216 ||||||| ||||||||||||||||| Sbjct: 34986 tttcccttccccctttcccctttcc 35010
>gb|AC107631.20| Mus musculus chromosome 5, clone RP23-5M20, complete sequence Length = 225977 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 162 cccgccccctctcttccttcc 182 ||||||||||||||||||||| Sbjct: 18005 cccgccccctctcttccttcc 17985
>gb|AE003540.3| Drosophila melanogaster chromosome 3L, section 45 of 83 of the complete sequence Length = 297381 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 236 cgcatcgcatcgcgtcgcccacccagcaa 264 ||||||||||||| ||||||| ||||||| Sbjct: 22973 cgcatcgcatcgcatcgcccagccagcaa 22945
>gb|AE003489.2| Drosophila melanogaster chromosome X, section 41 of 74 of the complete sequence Length = 291799 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 231 cgcatcgcatcgcatcgcgtc 251 ||||||||||||||||||||| Sbjct: 202154 cgcatcgcatcgcatcgcgtc 202134
>gb|AC006257.1|AC006257 Homo sapiens, clone hRPK.11_A_1, complete sequence Length = 175818 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 tctcttccttccatcccaggg 191 ||||||||||||||||||||| Sbjct: 144137 tctcttccttccatcccaggg 144117
>dbj|AP002851.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1042C11 Length = 200610 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 cctctcttccttccatcccag 189 ||||||||||||||||||||| Sbjct: 190025 cctctcttccttccatcccag 190045
>emb|CT030186.13| Mouse DNA sequence from clone RP23-80I4 on chromosome 12, complete sequence Length = 228891 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 195 ccctcccccctttcccctttc 215 ||||||||||||||||||||| Sbjct: 222561 ccctcccccctttcccctttc 222541
>dbj|AP003356.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1732A1 Length = 170533 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 cctctcttccttccatcccag 189 ||||||||||||||||||||| Sbjct: 32924 cctctcttccttccatcccag 32944
>ref|NM_128624.1| Arabidopsis thaliana unknown protein AT2G30710 mRNA, complete cds Length = 1854 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 tcctcctccattcccaatctctcc 110 ||||||||||| |||||||||||| Sbjct: 399 tcctcctccatacccaatctctcc 422
>gb|BC039818.1| Homo sapiens NMDA receptor regulated 1, mRNA (cDNA clone IMAGE:5499884), partial cds Length = 2113 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 cggcagcggcggcggtcgga 356 |||||||||||||||||||| Sbjct: 198 cggcagcggcggcggtcgga 217
>ref|NM_184755.1| Oryza sativa (japonica cultivar-group), mRNA Length = 444 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 cagcaagcaagcaagccgcc 278 |||||||||||||||||||| Sbjct: 135 cagcaagcaagcaagccgcc 154
>gb|BT016375.1| Zea mays clone Contig208 mRNA sequence Length = 815 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 ggcctcggcagcggcggcgg 351 |||||||||||||||||||| Sbjct: 376 ggcctcggcagcggcggcgg 357
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ctttcccctttccgccctca 223 |||||||||||||||||||| Sbjct: 178113 ctttcccctttccgccctca 178132
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 ggcgctggcgatcgagctcc 324 |||||||||||||||||||| Sbjct: 25791 ggcgctggcgatcgagctcc 25810
>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence Length = 2205233 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 agggtttccctccccccttt 207 |||||||||||||||||||| Sbjct: 994454 agggtttccctccccccttt 994473
>gb|AC159454.1| Trypanosoma brucei chromosome 7 clone RPCI93-6C8, complete sequence Length = 150601 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 agggtttccctccccccttt 207 |||||||||||||||||||| Sbjct: 45411 agggtttccctccccccttt 45392
>gb|AC151408.1| Pan troglodytes chromosome X clone PTB-007P20 map human ortholog q23, complete sequence Length = 68318 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 ctcctccattcccaatctct 108 |||||||||||||||||||| Sbjct: 25220 ctcctccattcccaatctct 25201
>ref|XM_593678.2| PREDICTED: Bos taurus similar to KIAA1529 (LOC515625), mRNA Length = 3442 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 agctcctccgctcctcctcc 95 |||||||||||||||||||| Sbjct: 1279 agctcctccgctcctcctcc 1260
>ref|NM_057175.3| Homo sapiens NMDA receptor regulated 1 (NARG1), mRNA Length = 5554 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 cggcagcggcggcggtcgga 356 |||||||||||||||||||| Sbjct: 183 cggcagcggcggcggtcgga 202
>gb|AC131339.3| Mus musculus BAC clone RP23-226F20 from chromosome 16, complete sequence Length = 180384 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 91 cctccattcccaatctctcctagg 114 |||||| ||||||||||||||||| Sbjct: 75254 cctccactcccaatctctcctagg 75231
>ref|XM_658004.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5492.2), mRNA Length = 1653 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 gcatcccgcatccgagccgc 149 |||||||||||||||||||| Sbjct: 239 gcatcccgcatccgagccgc 258
>gb|AC138737.10| Mus musculus chromosome 5, clone RP23-307F20, complete sequence Length = 216064 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 78 ctcctccgctcctcctccattccc 101 ||||||| |||||||||||||||| Sbjct: 31441 ctcctcccctcctcctccattccc 31464
>emb|CT009717.9| Mouse DNA sequence from clone RP23-216H9 on chromosome 13, complete sequence Length = 220233 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 tcctccgctcatcctcctct 442 |||||||||||||||||||| Sbjct: 49874 tcctccgctcatcctcctct 49893
>gb|AC125121.4| Mus musculus BAC clone RP24-267O4 from chromosome 6, complete sequence Length = 162573 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 198 tcccccctttcccctttccgccct 221 ||||||||||||||||||| |||| Sbjct: 52645 tcccccctttcccctttcccccct 52668
>gb|AC133646.4| Mus musculus BAC clone RP23-254F11 from chromosome 18, complete sequence Length = 209764 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 ctcctcctccattcccaatctctc 109 |||||||||| ||||||||||||| Sbjct: 42898 ctcctcctcctttcccaatctctc 42875
>emb|CR956411.6| Pig DNA sequence from clone CH242-282N1 on chromosome 17, complete sequence Length = 221712 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatccc 187 |||||||||||||||||||| Sbjct: 145079 ccctctcttccttccatccc 145060
>gb|AY039242.1| Homo sapiens gastric cancer antigen Ga19 mRNA, complete cds Length = 3084 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 cggcagcggcggcggtcgga 356 |||||||||||||||||||| Sbjct: 208 cggcagcggcggcggtcgga 227
>gb|AC163221.4| Mus musculus chromosome 19, clone RP23-376A6, complete sequence Length = 188740 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 cccgccccctctcttccttc 181 |||||||||||||||||||| Sbjct: 50869 cccgccccctctcttccttc 50888
>emb|CR932964.2| Medicago truncatula chromosome 5 clone mte1-60l18, COMPLETE SEQUENCE Length = 93777 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 ccgcatcgcatcgcatcgcgtcgc 253 |||||||||||||| ||||||||| Sbjct: 66797 ccgcatcgcatcgcctcgcgtcgc 66820
>emb|AL451069.34| Human DNA sequence from clone RP11-432J24 on chromosome 10 Contains the 3' end of gene LOC170394, four novel genes, gene LOC170393, the 5' end of the INPP5A gene for inositol polyphosphate-5-phosphatase 40kDa and five CpG islands, complete sequence Length = 149579 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 cacccagcaagcaagcaagc 274 |||||||||||||||||||| Sbjct: 91910 cacccagcaagcaagcaagc 91929
>emb|AL031117.1|HS914P14 Human DNA sequence from clone RP5-914P14 on chromosome Xq23 Contains the 3' end of the PAK3 gene for p21 (CDKN1A)-activated kinase 3, the CAPN6 gene for calpain 6, a glutamate dehydrogenase 1 (GLUD1) pseudogene and the 3' end of the DCX gene for doublecortex; lissencephaly, X-linked (doublecortin), complete sequence Length = 155375 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 ctcctccattcccaatctct 108 |||||||||||||||||||| Sbjct: 99868 ctcctccattcccaatctct 99849
>emb|BX842624.1| Neurospora crassa DNA linkage group I BAC clone B10D6 Length = 89019 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 ccgcatcgcatcgcatcgcgtcgc 253 ||||||||||||||||||| |||| Sbjct: 20199 ccgcatcgcatcgcatcgcatcgc 20222
>emb|AL645696.30| Mouse DNA sequence from clone RP23-429E18 on chromosome 1 Contains two novel genes, complete sequence Length = 159399 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 cccgccccctctcttccttc 181 |||||||||||||||||||| Sbjct: 147065 cccgccccctctcttccttc 147046
>emb|AL669844.20| Mouse DNA sequence from clone RP23-395O6 on chromosome 11 Contains the 3' end of a novel gene, a novel gene, the Stk10 gene for serine/threonine kinase 10, the 5' end of the Fbxw1b gene for F-box and WD-40 domain protein 1B and two CpG islands, complete sequence Length = 221145 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ccgccccctctcttccttcc 182 |||||||||||||||||||| Sbjct: 169103 ccgccccctctcttccttcc 169122
>emb|AL604062.15| Mouse DNA sequence from clone RP23-104B6 on chromosome 11 Contains a novel gene, a ferritin light chain (Ftl) pseudogene and a CpG island, complete sequence Length = 216510 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 198 tcccccctttcccctttccgccct 221 ||||||||||||||||||| |||| Sbjct: 135305 tcccccctttcccctttcccccct 135282
>gb|AC104850.2| Homo sapiens chromosome 3 clone RP11-241K18, complete sequence Length = 173580 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 ccctctcttccttccatccc 187 |||||||||||||||||||| Sbjct: 116220 ccctctcttccttccatccc 116201
>emb|CR861248.1| Pongo pygmaeus mRNA; cDNA DKFZp459P063 (from clone DKFZp459P063) Length = 4127 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 cggcagcggcggcggtcgga 356 |||||||||||||||||||| Sbjct: 195 cggcagcggcggcggtcgga 214
>gb|AF091940.1| Enkianthus campanulatus internal transcribed spacer 1 and 5.8S ribosomal RNA, complete sequence; and internal transcribed spacer 2, partial sequence Length = 617 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 cgcatcgcgtcgcccaccca 260 |||||||||||||||||||| Sbjct: 398 cgcatcgcgtcgcccaccca 417
>gb|AY128815.1| Arabidopsis thaliana unknown protein (At2g30710) mRNA, complete cds Length = 1369 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 tcctcctccattcccaatctctcc 110 ||||||||||| |||||||||||| Sbjct: 129 tcctcctccatacccaatctctcc 152
>gb|AC151614.2| Emiliania huxleyi clone JGIACCU-13K1, complete sequence Length = 42022 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ggcctcggcagcggcggcgg 351 |||||||||||||||||||| Sbjct: 4708 ggcctcggcagcggcggcgg 4727
>gb|AE006027.1| Caulobacter crescentus CB15 section 353 of 359 of the complete genome Length = 10951 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 326 ggcgagggcctcggcagcggcggcggtc 353 ||||| ||||||||||||| |||||||| Sbjct: 8964 ggcgaaggcctcggcagcgtcggcggtc 8991
>gb|AC102953.5| Homo sapiens BAC clone RP11-1246C19 from 7, complete sequence Length = 148996 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 gtttccctcccccctttccc 210 |||||||||||||||||||| Sbjct: 96519 gtttccctcccccctttccc 96538
>gb|AC084017.14| Homo sapiens 3 BAC RP11-208P4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167102 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 tttccctcccccctttcccc 211 |||||||||||||||||||| Sbjct: 62342 tttccctcccccctttcccc 62323
>dbj|AK023402.1| Homo sapiens cDNA FLJ13340 fis, clone OVARC1001942, weakly similar to N-TERMINAL ACETYLTRANSFERASE 1 (EC 2.3.1.88) Length = 1985 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 cggcagcggcggcggtcgga 356 |||||||||||||||||||| Sbjct: 206 cggcagcggcggcggtcgga 225
>dbj|AK023115.1| Homo sapiens cDNA FLJ13053 fis, clone NT2RP3001459 Length = 2051 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 cggcagcggcggcggtcgga 356 |||||||||||||||||||| Sbjct: 768 cggcagcggcggcggtcgga 749
>gb|AC104212.3| Homo sapiens chromosome 8, clone RP11-941H19, complete sequence Length = 196806 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 cctcccccctttcccctttc 215 |||||||||||||||||||| Sbjct: 18078 cctcccccctttcccctttc 18059
>gb|AC002340.3| Arabidopsis thaliana chromosome 2 BAC T11J7 genomic sequence, complete sequence Length = 79574 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 tcctcctccattcccaatctctcc 110 ||||||||||| |||||||||||| Sbjct: 42590 tcctcctccatacccaatctctcc 42567
>gb|AC099332.2| Homo sapiens chromosome 3 clone RP11-256B12, complete sequence Length = 164268 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 ccctctcttccttccatccc 187 |||||||||||||||||||| Sbjct: 132666 ccctctcttccttccatccc 132685
>gb|AC093690.5| Homo sapiens BAC clone RP11-731I19 from 2, complete sequence Length = 201467 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ttccctcccccctttcccct 212 |||||||||||||||||||| Sbjct: 176460 ttccctcccccctttcccct 176441
>gb|AC023024.6| Homo sapiens, clone RP11-299G20, complete sequence Length = 183671 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 tttccctcccccctttcccc 211 |||||||||||||||||||| Sbjct: 94712 tttccctcccccctttcccc 94731
>gb|AF113529.1|AF113529 Cavia porcellus chloride channel protein (ClC-2) mRNA, alternative splice product, complete cds Length = 3212 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ggcctcggcagcggcggcgg 351 |||||||||||||||||||| Sbjct: 155 ggcctcggcagcggcggcgg 174
>gb|AC116380.14| Mus musculus chromosome 1, clone RP23-6F21, complete sequence Length = 232429 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 cctcccccctttcccctttc 215 |||||||||||||||||||| Sbjct: 204938 cctcccccctttcccctttc 204919
>gb|AC026443.4| Homo sapiens chromosome 5 clone CTD-2296H22, complete sequence Length = 118562 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 195 ccctcccccctttcccctttccgccctcaaag 226 |||||| |||||||||||||| ||||||||| Sbjct: 22269 ccctccaccctttcccctttcgaccctcaaag 22238
>gb|AC131664.3| Mus musculus BAC clone RP23-274J16 from chromosome 5, complete sequence Length = 189996 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 tccctcccccctttcccctt 213 |||||||||||||||||||| Sbjct: 37260 tccctcccccctttcccctt 37279
>gb|AC152060.3| Mus musculus BAC clone RP23-430C3 from chromosome 18, complete sequence Length = 198600 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 195 ccctcccccctttcccctttccgccctc 222 |||||||||||||||||| ||| ||||| Sbjct: 25194 ccctcccccctttcccctctcccccctc 25221
>emb|BX323593.12| Zebrafish DNA sequence from clone DKEY-107I18 in linkage group 14, complete sequence Length = 198776 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 ttccctcccccctttcccctttcc 216 ||||||||||||||| |||||||| Sbjct: 112069 ttccctccccccttttccctttcc 112046
>gb|DQ056855.1| Cavia porcellus ClC-2 chloride channel variant (ClC-2) mRNA, complete cds, alternatively spliced Length = 2791 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ggcctcggcagcggcggcgg 351 |||||||||||||||||||| Sbjct: 22 ggcctcggcagcggcggcgg 41
>gb|AC084404.8|AC084404 Oryza sativa chromosome 3 BAC OSJNBa0026A15 genomic sequence, complete sequence Length = 156929 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 cagcaagcaagcaagccgcc 278 |||||||||||||||||||| Sbjct: 104514 cagcaagcaagcaagccgcc 104495
>gb|AF370511.1|AF370511 Arabidopsis thaliana Unknown protein (At2g30710; T11J7.10) mRNA, complete cds Length = 1854 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 tcctcctccattcccaatctctcc 110 ||||||||||| |||||||||||| Sbjct: 399 tcctcctccatacccaatctctcc 422
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 cggcagcggcggcggtcgga 356 |||||||||||||||||||| Sbjct: 30956357 cggcagcggcggcggtcgga 30956338
>gb|AY016370.1| Homo sapiens hnRNPA1 pseudogene, complete sequence; and CC chemokine receptor 8 (CCR8) and CX3C chemokine receptor 1 (CX3CR1) genes, complete cds Length = 86172 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 ccctctcttccttccatccc 187 |||||||||||||||||||| Sbjct: 19290 ccctctcttccttccatccc 19309
>gb|AF327722.1|AF327722 Homo sapiens putative acetyltransferase mRNA, complete cds Length = 4192 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 cggcagcggcggcggtcgga 356 |||||||||||||||||||| Sbjct: 206 cggcagcggcggcggtcgga 225
>emb|BX819853.1|CNS0A9F0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS39ZC09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1540 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 tcctcctccattcccaatctctcc 110 ||||||||||| |||||||||||| Sbjct: 198 tcctcctccatacccaatctctcc 221
>gb|AC097376.3| Homo sapiens BAC clone RP11-83A24 from 4, complete sequence Length = 145395 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 cggcagcggcggcggtcgga 356 |||||||||||||||||||| Sbjct: 7787 cggcagcggcggcggtcgga 7806
>gb|AC106895.5| Homo sapiens BAC clone RP11-161D15 from 4, complete sequence Length = 135450 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 tttccctcccccctttcccc 211 |||||||||||||||||||| Sbjct: 81131 tttccctcccccctttcccc 81150
>gb|AC156451.2| Volvox carteri clone JGIAOBO-45F10, complete sequence Length = 35415 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 ttccctcccccctttcccctttcc 216 ||||||||||||||||||| |||| Sbjct: 5525 ttccctcccccctttcccccttcc 5502
>gb|AC007561.4| Homo sapiens BAC clone RP11-394E1 from 2, complete sequence Length = 106093 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 192 tttccctcccccctttcccctttc 215 ||||||| |||||||||||||||| Sbjct: 39932 tttcccttccccctttcccctttc 39909
>gb|AC009686.14| Homo sapiens chromosome 8, clone RP11-92K15, complete sequence Length = 191166 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 cctcccccctttcccctttc 215 |||||||||||||||||||| Sbjct: 160365 cctcccccctttcccctttc 160346
>dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516G10 Length = 148937 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 cggcagcggcggcggtcgga 356 |||||||||||||||||||| Sbjct: 11313 cggcagcggcggcggtcgga 11294
>gb|BC032642.1| Homo sapiens NMDA receptor regulated 1, mRNA (cDNA clone IMAGE:5495731), partial cds Length = 2124 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 cggcagcggcggcggtcgga 356 |||||||||||||||||||| Sbjct: 208 cggcagcggcggcggtcgga 227
>emb|BX678775.3| Mouse DNA sequence from clone RP24-82E8 on chromosome 11, complete sequence Length = 65735 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 195 ccctcccccctttcccctttccgccctc 222 ||||||||| |||||||||||| ||||| Sbjct: 5425 ccctcccccttttcccctttcccccctc 5452
>dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684F11 Length = 147731 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 cggcagcggcggcggtcgga 356 |||||||||||||||||||| Sbjct: 139934 cggcagcggcggcggtcgga 139915
>dbj|AK109220.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-E04, full insert sequence Length = 601 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 cagcaagcaagcaagccgcc 278 |||||||||||||||||||| Sbjct: 184 cagcaagcaagcaagccgcc 203
>emb|AJ314788.1|HSA314788 Homo sapiens mRNA for putative N-acetyltransferase Length = 5505 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 cggcagcggcggcggtcgga 356 |||||||||||||||||||| Sbjct: 135 cggcagcggcggcggtcgga 154
>dbj|AK069006.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003I08, full insert sequence Length = 1994 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 ggcctcggcagcggcggcgg 351 |||||||||||||||||||| Sbjct: 581 ggcctcggcagcggcggcgg 562
>gb|AY105672.1| Zea mays PCO122536 mRNA sequence Length = 842 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 ggcctcggcagcggcggcgg 351 |||||||||||||||||||| Sbjct: 387 ggcctcggcagcggcggcgg 368
>emb|CT485668.1| Leptosphaeria maculans : genomic region surrounding the avirulence gene AvrLm1 (AM084345) Length = 100390 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 226 gccgccgcatcgcatcgcatcgcg 249 |||||||||||||||| ||||||| Sbjct: 46136 gccgccgcatcgcatcacatcgcg 46113
>gb|AF133752.1|AF133752 Enkianthus campanulatus internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 605 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 cgcatcgcgtcgcccaccca 260 |||||||||||||||||||| Sbjct: 376 cgcatcgcgtcgcccaccca 395
>gb|AC004465.1|AC004465 Homo sapiens 12q24 PAC RPCI3-363I18 (Roswell Park Cancer Institute Human PAC library) complete sequence Length = 102750 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 194 tccctcccccctttcccctttccg 217 ||||| |||||||||||||||||| Sbjct: 79441 tccctgccccctttcccctttccg 79418
>emb|AL844878.4|CNS08CB1 Oryza sativa chromosome 12, . BAC OSJNBb0036A19 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128795 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 332 ggcctcggcagcggcggcgg 351 |||||||||||||||||||| Sbjct: 31534 ggcctcggcagcggcggcgg 31515
>gb|AC149591.5| Mus musculus BAC clone RP23-332I9 from 18, complete sequence Length = 231381 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 195 ccctcccccctttcccctttccgccctc 222 |||||||||||||||||| ||| ||||| Sbjct: 14937 ccctcccccctttcccctctcccccctc 14910
>gb|AF026388.1|AF026388 Eimeria tenella small subunit ribosomal RNA, 5.8S ribosomal RNA, and large subunit ribosomal RNA genes, and internal transcribed spacer 1 and 2, complete sequence Length = 8502 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 cacccagcaagcaagcaagc 274 |||||||||||||||||||| Sbjct: 7971 cacccagcaagcaagcaagc 7952
>gb|AC158942.7| Mus musculus chromosome 5, clone RP23-240A11, complete sequence Length = 194039 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 ctcctccgctcctcctccattccc 101 ||||||| |||||||||||||||| Sbjct: 19832 ctcctcccctcctcctccattccc 19809 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,584,011 Number of Sequences: 3902068 Number of extensions: 3584011 Number of successful extensions: 121643 Number of sequences better than 10.0: 182 Number of HSP's better than 10.0 without gapping: 186 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 119866 Number of HSP's gapped (non-prelim): 1759 length of query: 456 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 434 effective length of database: 17,147,199,772 effective search space: 7441884701048 effective search space used: 7441884701048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
