Clone Information

BLAST Search Result

Clone Name	bastl45d08
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	UBE11_WHEAT (P20973) Ubiquitin-activating enzyme E1 1	217	9e-57
2	UBE12_WHEAT (P31251) Ubiquitin-activating enzyme E1 2	214	6e-56
3	UBE13_WHEAT (P31252) Ubiquitin-activating enzyme E1 3	167	8e-42
4	UBE1_RABIT (Q29504) Ubiquitin-activating enzyme E1	117	1e-26
5	UBE1_HUMAN (P22314) Ubiquitin-activating enzyme E1 (A1S9 protein)	117	1e-26
6	UBE1_MOUSE (Q02053) Ubiquitin-activating enzyme E1 1	115	4e-26
7	UBA1_SCHPO (O94609) Ubiquitin-activating enzyme E1 1 (Poly(A)+ R...	104	8e-23
8	UBA1_YEAST (P22515) Ubiquitin-activating enzyme E1 1	104	1e-22
9	UBE1L_HUMAN (P41226) Ubiquitin-activating enzyme E1 homolog (D8)	98	1e-20
10	ULE1A_MOUSE (Q9R1T2) Ubiquitin-like 1-activating enzyme E1A (SUM...	82	8e-16
11	ULE1A_HUMAN (Q9UBE0) Ubiquitin-like 1-activating enzyme E1A (SUM...	81	1e-15
12	ULA1_RAT (Q9Z1A5) NEDD8-activating enzyme E1 regulatory subunit ...	74	2e-13
13	ULA1_CAEEL (Q18217) NEDD8-activating enzyme E1 regulatory subuni...	73	3e-13
14	ULA1_MOUSE (Q8VBW6) NEDD8-activating enzyme E1 regulatory subuni...	72	5e-13
15	ULA1_CHICK (Q5ZIE6) NEDD8-activating enzyme E1 regulatory subuni...	72	6e-13
16	ULA1_HUMAN (Q13564) NEDD8-activating enzyme E1 regulatory subuni...	72	6e-13
17	ULA1_BRARE (Q7SXP2) NEDD8-activating enzyme E1 regulatory subuni...	68	1e-11
18	ULA1_XENLA (Q6NTW6) NEDD8-activating enzyme E1 regulatory subuni...	65	7e-11
19	ULA1_DROME (Q9VTE9) NEDD8-activating enzyme E1 regulatory subunit	62	5e-10
20	ULA1_ARATH (P42744) NEDD8-activating enzyme E1 regulatory subuni...	61	1e-09
21	RHC31_YEAST (Q06624) DNA damage tolerance protein RHC31 (RAD31 h...	60	3e-09
22	RAD31_SCHPO (P79064) DNA damage tolerance protein rad31	58	9e-09
23	ULA1_MACFA (Q4R3L6) NEDD8-activating enzyme E1 regulatory subuni...	54	2e-07
24	UBA3_CAEEL (Q19360) NEDD8-activating enzyme E1 catalytic subunit...	52	5e-07
25	HESA2_ANAVT (P46048) Protein hesA, vegetative	52	7e-07
26	THIF_ECOLI (P30138) Adenylyltransferase thiF (EC 2.7.7.-)	52	7e-07
27	UBA3_SCHPO (Q09765) NEDD8-activating enzyme E1 catalytic subunit...	50	3e-06
28	ULE1B_MOUSE (Q9Z1F9) Ubiquitin-like 1-activating enzyme E1B (SUM...	49	4e-06
29	HESA1_ANAVT (P46049) Protein hesA, heterocyst	49	7e-06
30	ULE1B_HUMAN (Q9UBT2) Ubiquitin-like 1-activating enzyme E1B (SUM...	49	7e-06
31	HESA_ANASP (P18500) Protein hesA	47	3e-05
32	ULA1_SCHPO (Q9UT93) NEDD8-activating enzyme E1 regulatory subuni...	46	4e-05
33	HESA_PLEBO (P46037) Protein hesA	45	8e-05
34	UBA3_YEAST (Q99344) NEDD8-activating enzyme E1 catalytic subunit...	45	8e-05
35	UBA3_RAT (Q99MI7) NEDD8-activating enzyme E1 catalytic subunit (...	44	2e-04
36	UBA3_MOUSE (Q8C878) NEDD8-activating enzyme E1 catalytic subunit...	44	2e-04
37	UBA3_PONPY (Q5R4A0) NEDD8-activating enzyme E1 catalytic subunit...	44	2e-04
38	UBA3_HUMAN (Q8TBC4) NEDD8-activating enzyme E1 catalytic subunit...	44	2e-04
39	MOEB_ECOLI (P12282) Molybdopterin biosynthesis protein moeB	42	9e-04
40	MOCS3_HUMAN (O95396) Molybdenum cofactor synthesis protein 3 (Mo...	42	9e-04
41	UBA3_DROME (Q9V6U8) NEDD8-activating enzyme E1 catalytic subunit...	40	0.003
42	YABA_SCHPO (Q09810) Hypothetical protein C2G11.10c in chromosome I	40	0.003
43	YCXH_PORPU (P51335) Hypothetical 43.4 kDa protein in rpl9-rpl11 ...	40	0.003
44	MOEB_SALTY (Q56067) Molybdopterin biosynthesis protein moeB	39	0.006
45	YKC7_YEAST (P36101) Protein YKL027W	38	0.013
46	YGDL_ECOLI (Q46927) Hypothetical protein ygdL	38	0.013
47	MOC3_ARATH (Q9ZNW0) Molybdenum cofactor synthesis protein 3 (Mol...	35	0.063
48	RPOC_WEIHE (P96177) DNA-directed RNA polymerase beta' chain (EC ...	34	0.14
49	MOEB_HAEIN (P45211) Molybdopterin biosynthesis protein moeB	34	0.14
50	UE1D1_PONPY (Q5R8X4) Ubiquitin-activating enzyme E1 domain-conta...	34	0.18
51	UE1D1_HUMAN (Q9GZZ9) Ubiquitin-activating enzyme E1 domain-conta...	34	0.18
52	UE1D1_RAT (Q5M7A4) Ubiquitin-activating enzyme E1 domain-contain...	33	0.24
53	ATG7_EMENI (Q5AWA2) Autophagy-related protein 7 (Autophagy-relat...	33	0.31
54	RPOC_WEIPA (P96178) DNA-directed RNA polymerase beta' chain (EC ...	33	0.31
55	ULA1_YEAST (Q12059) NEDD8-activating enzyme E1 regulatory subuni...	33	0.41
56	ATG7_CANGA (Q6FQY7) Autophagy-related protein 7 (Autophagy-relat...	33	0.41
57	RPOC_BACHK (Q6HPR5) DNA-directed RNA polymerase beta' chain (EC ...	32	0.53
58	RPOC_BACCZ (Q63H97) DNA-directed RNA polymerase beta' chain (EC ...	32	0.53
59	RPOC_BACCR (Q81J47) DNA-directed RNA polymerase beta' chain (EC ...	32	0.53
60	RPOC_BACC1 (Q73FA3) DNA-directed RNA polymerase beta' chain (EC ...	32	0.53
61	RPOC_BACAN (P77819) DNA-directed RNA polymerase beta' chain (EC ...	32	0.53
62	UE1D1_MOUSE (Q8VE47) Ubiquitin-activating enzyme E1 domain-conta...	31	1.2
63	ATG7_ASHGO (Q756G8) Autophagy-related protein 7 (Autophagy-relat...	31	1.6
64	RLUE_XANAC (Q8PQN3) Ribosomal large subunit pseudouridine syntha...	31	1.6
65	RFIP1_MOUSE (Q9D620) Rab11 family-interacting protein 1 (Rab11-F...	31	1.6
66	UBA4_YEAST (P38820) E1-like URM1 activator protein (Ubiquitin-li...	31	1.6
67	K1H1_MOUSE (Q61765) Keratin, type I cuticular Ha1 (Hair keratin,...	30	2.7
68	ATG7_YEAST (P38862) Autophagy-related protein 7 (Autophagy-relat...	30	2.7
69	YBHO_SALTY (Q8ZQP4) Putative cardiolipin synthetase ybhO (EC 2.7...	30	2.7
70	YBHO_SALTI (Q8Z883) Putative cardiolipin synthetase ybhO (EC 2.7...	30	2.7
71	K1HA_HUMAN (O76009) Keratin, type I cuticular Ha3-I (Hair kerati...	30	2.7
72	SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1...	30	3.5
73	RPOC_LEUME (P94892) DNA-directed RNA polymerase beta' chain (EC ...	30	3.5
74	Y1643_STRP8 (Q8P000) UPF0144 protein spyM18_1643	30	3.5
75	Y1633_STRP1 (P67284) UPF0144 protein SPy1633/M5005_Spy1342	30	3.5
76	Y1388_STRP6 (Q5XAP0) UPF0144 protein M6_Spy1388	30	3.5
77	Y1376_STRP3 (P67285) UPF0144 protein SpyM3_1376/SPs0486	30	3.5
78	K1H1_HUMAN (Q15323) Keratin, type I cuticular Ha1 (Hair keratin,...	30	3.5
79	RPOC_LISGR (P77882) DNA-directed RNA polymerase beta' chain (EC ...	30	3.5
80	RPOC_LEUPS (P94899) DNA-directed RNA polymerase beta' chain (EC ...	29	4.5
81	SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1	29	4.5
82	SPFH1_PONPY (Q5RCJ9) SPFH domain-containing protein 1 precursor	29	5.9
83	SPFH1_MOUSE (Q91X78) SPFH domain-containing protein 1 precursor ...	29	5.9
84	SPFH1_HUMAN (O75477) SPFH domain-containing protein 1 precursor ...	29	5.9
85	ITA10_HUMAN (O75578) Integrin alpha-10 precursor	29	5.9
86	RPOC_BACSK (Q5WLR9) DNA-directed RNA polymerase beta' chain (EC ...	29	5.9
87	RPOC_LISMO (Q8YA96) DNA-directed RNA polymerase beta' chain (EC ...	29	5.9
88	RPOC_LISMF (Q724E9) DNA-directed RNA polymerase beta' chain (EC ...	29	5.9
89	RPOC_LISIN (P77879) DNA-directed RNA polymerase beta' chain (EC ...	29	5.9
90	RPOB_PINTH (P41607) DNA-directed RNA polymerase beta chain (EC 2...	29	5.9
91	RPOB_PINKO (Q85X54) DNA-directed RNA polymerase beta chain (EC 2...	29	5.9
92	SEL10_CAEEL (Q93794) F-box/WD-repeat protein sel-10 (Suppressor/...	29	5.9
93	KLF9_HUMAN (Q13886) Krueppel-like factor 9 (Transcription factor...	29	5.9
94	ATG7_SCHPO (O43069) Autophagy-related protein 7 (Autophagy-relat...	29	5.9
95	ATG7_CRYNE (Q5KC57) Autophagy-related protein 7 (Autophagy-relat...	28	7.7
96	SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1	28	7.7
97	POLR_ELV (P35928) RNA replicase polyprotein (EC 2.7.7.48)	28	7.7
98	SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1...	28	7.7

>UBE11_WHEAT (P20973) Ubiquitin-activating enzyme E1 1|
          Length = 1051

 Score =  217 bits (553), Expect = 9e-57
 Identities = 111/113 (98%), Positives = 111/113 (98%)
 Frame = +2

Query: 107 REEGDAAMARRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAG 286
           REEGDAAMA RGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAG
Sbjct: 29  REEGDAAMAGRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAG 88

Query: 287 VKSVTLHDDGNVELWDLSGNFFLSENDVGQNRAQACVQKLQELNNAVLVSALT 445
           VKSVTLHDDGNVELWDLS NFFLSENDVGQNRAQACVQKLQELNNAVLVSALT
Sbjct: 89  VKSVTLHDDGNVELWDLSSNFFLSENDVGQNRAQACVQKLQELNNAVLVSALT 141



 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
 Frame = +2

Query: 164 HSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVK-----SVTLHDDGNVEL 328
           +  Q++V+G +   +L  + + + G   LG E  KNL L G+      ++TL DD  +E 
Sbjct: 445 YDAQISVFGSKLQNKLEEAKIFMVGSGALGCEFLKNLALMGISCSQNGNLTLTDDDVIEK 504

Query: 329 WDLSGNFFLSENDVGQNRAQACVQKLQELNNAVLVSAL 442
            +LS  F   + ++GQ ++         +N  + V AL
Sbjct: 505 SNLSRQFLFRDWNIGQPKSTVAATAAMVINPKLHVEAL 542

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>UBE12_WHEAT (P31251) Ubiquitin-activating enzyme E1 2|
          Length = 1051

 Score =  214 bits (546), Expect = 6e-56
 Identities = 110/113 (97%), Positives = 110/113 (97%)
 Frame = +2

Query: 107 REEGDAAMARRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAG 286
           REEGDAAMA RGNEIDEDLHSRQLAVYGRETMK LFGSNVLVSGLQGLGAEIAKNLVLAG
Sbjct: 29  REEGDAAMAGRGNEIDEDLHSRQLAVYGRETMKPLFGSNVLVSGLQGLGAEIAKNLVLAG 88

Query: 287 VKSVTLHDDGNVELWDLSGNFFLSENDVGQNRAQACVQKLQELNNAVLVSALT 445
           VKSVTLHDDGNVELWDLS NFFLSENDVGQNRAQACVQKLQELNNAVLVSALT
Sbjct: 89  VKSVTLHDDGNVELWDLSSNFFLSENDVGQNRAQACVQKLQELNNAVLVSALT 141



 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
 Frame = +2

Query: 164 HSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVK-----SVTLHDDGNVEL 328
           +  Q++V+G     +L  + + + G   LG E  KNL L G+      ++T+ DD  +E 
Sbjct: 445 YDAQISVFGSTLQNKLEEAKIFMVGSGALGCEFLKNLALMGISCSQNGNLTVTDDDVIEK 504

Query: 329 WDLSGNFFLSENDVGQNRAQACVQKLQELNNAVLVSAL 442
            +LS  F   + ++GQ ++         +N  + V AL
Sbjct: 505 SNLSRQFLFRDWNIGQPKSTVAATAAMVINPKLHVEAL 542

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>UBE13_WHEAT (P31252) Ubiquitin-activating enzyme E1 3|
          Length = 1053

 Score =  167 bits (424), Expect = 8e-42
 Identities = 84/107 (78%), Positives = 94/107 (87%)
 Frame = +2

Query: 125 AMARRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTL 304
           A+     EIDEDLHSRQLAVYGRETM+RLF S+VLVSGL GLGAEIAKNL LAGVKSVT+
Sbjct: 38  AVTAAPQEIDEDLHSRQLAVYGRETMRRLFASDVLVSGLNGLGAEIAKNLALAGVKSVTI 97

Query: 305 HDDGNVELWDLSGNFFLSENDVGQNRAQACVQKLQELNNAVLVSALT 445
           HD   V++WDLSGNFFLSE+D+G+NRA ACV KLQELNNAVL+SALT
Sbjct: 98  HDVKTVKMWDLSGNFFLSEDDIGKNRAAACVAKLQELNNAVLISALT 144



 Score = 48.9 bits (115), Expect = 6e-06
 Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
 Frame = +2

Query: 164 HSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVK-----SVTLHDDGNVEL 328
           +  Q++V+G +  K++  +N  V G   LG E  KNL L GV       +T+ DD  +E 
Sbjct: 448 YDAQVSVFGSKLQKKMEEANTFVVGSGALGCEFLKNLALMGVSCSSKGKLTITDDDIIEK 507

Query: 329 WDLSGNFFLSENDVGQNRAQACVQKLQELNNAVLVSAL 442
            +LS  F   + ++GQ ++         +N ++ + AL
Sbjct: 508 SNLSRQFLFRDWNIGQAKSTVAATAASAINPSLHIDAL 545

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>UBE1_RABIT (Q29504) Ubiquitin-activating enzyme E1|
          Length = 1058

 Score =  117 bits (294), Expect = 1e-26
 Identities = 63/108 (58%), Positives = 79/108 (73%), Gaps = 2/108 (1%)
 Frame = +2

Query: 128 MARRGNE--IDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVT 301
           MA+ G+E  IDE L+SRQL V G E MKRL  S+VLVSGL+GLG EIAKN++L GVK+VT
Sbjct: 41  MAKNGSEADIDEGLYSRQLYVLGHEAMKRLQTSSVLVSGLRGLGVEIAKNIILGGVKAVT 100

Query: 302 LHDDGNVELWDLSGNFFLSENDVGQNRAQACVQKLQELNNAVLVSALT 445
           LHD G  +  DLS  F+L E D+G+NRA+    +L ELN+ V V+A T
Sbjct: 101 LHDQGTAQWADLSSQFYLREEDIGKNRAEVSQPRLAELNSYVPVTAYT 148

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>UBE1_HUMAN (P22314) Ubiquitin-activating enzyme E1 (A1S9 protein)|
          Length = 1058

 Score =  117 bits (294), Expect = 1e-26
 Identities = 63/108 (58%), Positives = 79/108 (73%), Gaps = 2/108 (1%)
 Frame = +2

Query: 128 MARRGNE--IDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVT 301
           MA+ G+E  IDE L+SRQL V G E MKRL  S+VLVSGL+GLG EIAKN++L GVK+VT
Sbjct: 41  MAKNGSEADIDEGLYSRQLYVLGHEAMKRLQTSSVLVSGLRGLGVEIAKNIILGGVKAVT 100

Query: 302 LHDDGNVELWDLSGNFFLSENDVGQNRAQACVQKLQELNNAVLVSALT 445
           LHD G  +  DLS  F+L E D+G+NRA+    +L ELN+ V V+A T
Sbjct: 101 LHDQGTAQWADLSSQFYLREEDIGKNRAEVSQPRLAELNSYVPVTAYT 148

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>UBE1_MOUSE (Q02053) Ubiquitin-activating enzyme E1 1|
          Length = 1058

 Score =  115 bits (289), Expect = 4e-26
 Identities = 62/108 (57%), Positives = 78/108 (72%), Gaps = 2/108 (1%)
 Frame = +2

Query: 128 MARRGNE--IDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVT 301
           MA+ G+E  IDE L+SRQL V G E MK L  S+VLVSGL+GLG EIAKN++L GVK+VT
Sbjct: 41  MAKNGSEADIDESLYSRQLYVLGHEAMKMLQTSSVLVSGLRGLGVEIAKNIILGGVKAVT 100

Query: 302 LHDDGNVELWDLSGNFFLSENDVGQNRAQACVQKLQELNNAVLVSALT 445
           LHD G  +  DLS  F+L E D+G+NRA+    +L ELN+ V V+A T
Sbjct: 101 LHDQGTTQWADLSSQFYLREEDIGKNRAEVSQPRLAELNSYVPVTAYT 148

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>UBA1_SCHPO (O94609) Ubiquitin-activating enzyme E1 1 (Poly(A)+ RNA transport|
           protein 3)
          Length = 1012

 Score =  104 bits (260), Expect = 8e-23
 Identities = 56/100 (56%), Positives = 70/100 (70%)
 Frame = +2

Query: 143 NEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNV 322
           N IDE L+SRQL V G E MK++  SNVL+ G +GLG EIAKN+ LAGVKSVTL+D    
Sbjct: 13  NTIDEGLYSRQLYVLGHEAMKQMSQSNVLIIGCKGLGVEIAKNVCLAGVKSVTLYDPQPT 72

Query: 323 ELWDLSGNFFLSENDVGQNRAQACVQKLQELNNAVLVSAL 442
            + DLS  +FL+E+D+G  RA+  V KL ELN  V VS +
Sbjct: 73  RIEDLSSQYFLTEDDIGVPRAKVTVSKLAELNQYVPVSVV 112

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>UBA1_YEAST (P22515) Ubiquitin-activating enzyme E1 1|
          Length = 1024

 Score =  104 bits (259), Expect = 1e-22
 Identities = 57/99 (57%), Positives = 70/99 (70%)
 Frame = +2

Query: 146 EIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVE 325
           EIDE L+SRQL V G+E M ++  SNVL+ GL+GLG EIAKN+VLAGVKS+T+ D   V+
Sbjct: 13  EIDESLYSRQLYVLGKEAMLKMQTSNVLILGLKGLGVEIAKNVVLAGVKSMTVFDPEPVQ 72

Query: 326 LWDLSGNFFLSENDVGQNRAQACVQKLQELNNAVLVSAL 442
           L DLS  FFL+E D+GQ R      KL ELN  V V+ L
Sbjct: 73  LADLSTQFFLTEKDIGQKRGDVTRAKLAELNAYVPVNVL 111

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>UBE1L_HUMAN (P41226) Ubiquitin-activating enzyme E1 homolog (D8)|
          Length = 1011

 Score = 97.8 bits (242), Expect = 1e-20
 Identities = 53/95 (55%), Positives = 68/95 (71%)
 Frame = +2

Query: 149 IDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVEL 328
           +DE+L+SRQL V G   M+R+ G+ VLVSGLQGLGAE+AKNLVL GV S+TLHD      
Sbjct: 10  LDEELYSRQLYVLGSPAMQRIQGARVLVSGLQGLGAEVAKNLVLMGVGSLTLHDPHPTCW 69

Query: 329 WDLSGNFFLSENDVGQNRAQACVQKLQELNNAVLV 433
            DL+  F LSE D+ ++RA+A  + L +LN AV V
Sbjct: 70  SDLAAQFLLSEQDLERSRAEASQELLAQLNRAVQV 104



 Score = 40.8 bits (94), Expect = 0.002
 Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
 Frame = +2

Query: 131 ARRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKS----- 295
           A RG+  D      Q+AV+G    ++L   + L+ G   +G E+ K   L G+ +     
Sbjct: 408 ALRGSRYDG-----QIAVFGAGFQEKLRRQHYLLVGAGAIGCELLKVFALVGLGAGNSGG 462

Query: 296 VTLHDDGNVELWDLSGNFFLSENDVGQNRAQACVQKLQELNNAVLVSALT 445
           +T+ D  ++E  +LS  F     DVG+ +A+      + LN  + V  LT
Sbjct: 463 LTVVDMDHIERSNLSRQFLFRSQDVGRPKAEVAAAAARGLNPDLQVIPLT 512

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>ULE1A_MOUSE (Q9R1T2) Ubiquitin-like 1-activating enzyme E1A (SUMO-1-activating|
           enzyme subunit 1)
          Length = 350

 Score = 81.6 bits (200), Expect = 8e-16
 Identities = 43/94 (45%), Positives = 59/94 (62%)
 Frame = +2

Query: 164 HSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSG 343
           + RQ+ ++G E  KRL  S VL+ G++GLGAEIAKNL+LAGVK +T+ D   V   D   
Sbjct: 23  YDRQIRLWGLEAQKRLRASRVLIVGMKGLGAEIAKNLILAGVKGLTMLDHEQVSPEDPGA 82

Query: 344 NFFLSENDVGQNRAQACVQKLQELNNAVLVSALT 445
            F +    VG+NRA+A +++ Q LN  V V   T
Sbjct: 83  QFLIQTGSVGRNRAEASLERAQNLNPMVDVKVDT 116

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>ULE1A_HUMAN (Q9UBE0) Ubiquitin-like 1-activating enzyme E1A (SUMO-1-activating|
           enzyme subunit 1)
          Length = 346

 Score = 80.9 bits (198), Expect = 1e-15
 Identities = 44/94 (46%), Positives = 59/94 (62%)
 Frame = +2

Query: 164 HSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSG 343
           + RQ+ ++G E  KRL  S VL+ GL+GLGAEIAKNL+LAGVK +T+ D   V   D   
Sbjct: 19  YDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGA 78

Query: 344 NFFLSENDVGQNRAQACVQKLQELNNAVLVSALT 445
            F +    VG+NRA+A +++ Q LN  V V   T
Sbjct: 79  QFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDT 112

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>ULA1_RAT (Q9Z1A5) NEDD8-activating enzyme E1 regulatory subunit (Amyloid|
           protein-binding protein 1) (Amyloid beta precursor
           protein-binding protein 1, 59 kDa) (APP-BP1)
          Length = 534

 Score = 73.9 bits (180), Expect = 2e-13
 Identities = 40/100 (40%), Positives = 59/100 (59%)
 Frame = +2

Query: 128 MARRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLH 307
           MA++G  + E  + RQL ++G    + L  ++V +      G EI KNLVL G+ S T+ 
Sbjct: 1   MAQQGKILKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTII 60

Query: 308 DDGNVELWDLSGNFFLSENDVGQNRAQACVQKLQELNNAV 427
           D   V   D+  NFFL +  +G+NRAQA ++ LQELN+ V
Sbjct: 61  DGNQVSGEDVGNNFFLQKCSIGKNRAQAAMEFLQELNSDV 100

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>ULA1_CAEEL (Q18217) NEDD8-activating enzyme E1 regulatory subunit|
           (Ubiquitin-like activation protein 1)
          Length = 541

 Score = 73.2 bits (178), Expect = 3e-13
 Identities = 39/92 (42%), Positives = 58/92 (63%)
 Frame = +2

Query: 164 HSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSG 343
           + RQ+ ++G E    +  ++  V G   L  EI K+LVLAGV+S  + DD  VE  D+  
Sbjct: 10  YDRQVRLWGEEGQASIGSTSACVLGSDSLATEILKSLVLAGVQSFYVVDDAKVEQADIGQ 69

Query: 344 NFFLSENDVGQNRAQACVQKLQELNNAVLVSA 439
           NFFL  +D+G++RA+A ++KL ELN +V  SA
Sbjct: 70  NFFLHADDIGRSRAEATLEKLTELNPSVSGSA 101

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>ULA1_MOUSE (Q8VBW6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid|
           protein-binding protein 1) (Amyloid beta precursor
           protein-binding protein 1, 59 kDa) (APP-BP1)
          Length = 534

 Score = 72.4 bits (176), Expect = 5e-13
 Identities = 40/100 (40%), Positives = 58/100 (58%)
 Frame = +2

Query: 128 MARRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLH 307
           MA+ G  + E  + RQL ++G    + L  ++V +      G EI KNLVL G+ S T+ 
Sbjct: 1   MAQPGKILKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTII 60

Query: 308 DDGNVELWDLSGNFFLSENDVGQNRAQACVQKLQELNNAV 427
           D   V   D   NFFL ++ +G+NRAQA ++ LQELN+ V
Sbjct: 61  DGNLVSGEDAGNNFFLQKSSIGKNRAQAAMEFLQELNSDV 100

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>ULA1_CHICK (Q5ZIE6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid|
           protein-binding protein 1) (APP-BP1)
          Length = 535

 Score = 72.0 bits (175), Expect = 6e-13
 Identities = 41/101 (40%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
 Frame = +2

Query: 128 MARRGN-EIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTL 304
           MA+ G   + E  + RQL ++G    + L  ++V V      G EI KNLVL G+ S T+
Sbjct: 1   MAQPGRASLKEQRYDRQLRLWGDHGQEALESAHVCVINATATGTEILKNLVLPGIGSFTI 60

Query: 305 HDDGNVELWDLSGNFFLSENDVGQNRAQACVQKLQELNNAV 427
            D   V   D+  NFFL ++ +GQ+RAQ+  + LQELNN V
Sbjct: 61  VDGNRVSGEDVGNNFFLQKSHIGQSRAQSATELLQELNNDV 101

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>ULA1_HUMAN (Q13564) NEDD8-activating enzyme E1 regulatory subunit (Amyloid|
           protein-binding protein 1) (Amyloid beta precursor
           protein-binding protein 1, 59 kDa) (APP-BP1)
           (Protooncogene protein 1) (HPP1)
          Length = 534

 Score = 72.0 bits (175), Expect = 6e-13
 Identities = 39/100 (39%), Positives = 57/100 (57%)
 Frame = +2

Query: 128 MARRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLH 307
           MA+ G  + E  + RQL ++G    + L  ++V +      G EI KNLVL G+ S T+ 
Sbjct: 1   MAQLGKLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTII 60

Query: 308 DDGNVELWDLSGNFFLSENDVGQNRAQACVQKLQELNNAV 427
           D   V   D   NFFL  + +G+NRA+A ++ LQELN+ V
Sbjct: 61  DGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDV 100

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>ULA1_BRARE (Q7SXP2) NEDD8-activating enzyme E1 regulatory subunit (Amyloid|
           protein-binding protein 1) (APP-BP1)
          Length = 533

 Score = 67.8 bits (164), Expect = 1e-11
 Identities = 37/91 (40%), Positives = 53/91 (58%)
 Frame = +2

Query: 155 EDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWD 334
           E  + RQL ++G    + L  ++V +      G EI KNLVL G+ + T+ D   V   D
Sbjct: 9   EQRYDRQLRLWGDHGQEALENAHVCLINATASGTEILKNLVLPGIGAFTIVDGHKVSGED 68

Query: 335 LSGNFFLSENDVGQNRAQACVQKLQELNNAV 427
           +  NFFLS + +G+NRAQA  + LQELN+ V
Sbjct: 69  VGNNFFLSSSAIGKNRAQAATELLQELNSDV 99

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>ULA1_XENLA (Q6NTW6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid|
           protein-binding protein 1) (APP-BP1)
          Length = 533

 Score = 65.1 bits (157), Expect = 7e-11
 Identities = 36/93 (38%), Positives = 52/93 (55%)
 Frame = +2

Query: 149 IDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVEL 328
           I E  + RQL ++G    + L  ++V +      G EI KNLVL G+   T+ D   V  
Sbjct: 7   IKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGLFTIVDGNVVAG 66

Query: 329 WDLSGNFFLSENDVGQNRAQACVQKLQELNNAV 427
            D+  NFFL +  +G+NRAQ  ++ LQELN+ V
Sbjct: 67  EDVGNNFFLQKESIGKNRAQTSMELLQELNDDV 99

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>ULA1_DROME (Q9VTE9) NEDD8-activating enzyme E1 regulatory subunit|
          Length = 524

 Score = 62.4 bits (150), Expect = 5e-10
 Identities = 32/85 (37%), Positives = 49/85 (57%)
 Frame = +2

Query: 164 HSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSG 343
           + RQ+ ++G      L  + V +  +  +G E AK LVL G+   T+ D   V+  DL  
Sbjct: 18  YDRQIRLWGEHGQTLLEAATVCLVNVTAVGCETAKGLVLPGIGGFTVADGSTVKEEDLGN 77

Query: 344 NFFLSENDVGQNRAQACVQKLQELN 418
           NFFL  + +G+++A AC+Q LQELN
Sbjct: 78  NFFLDSSYLGKSKALACMQLLQELN 102

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>ULA1_ARATH (P42744) NEDD8-activating enzyme E1 regulatory subunit|
           (Auxin-resistance protein AXR1)
          Length = 540

 Score = 60.8 bits (146), Expect = 1e-09
 Identities = 32/88 (36%), Positives = 50/88 (56%)
 Frame = +2

Query: 164 HSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSG 343
           + RQL ++G      L  +++ +      G+E  KNLVL GV S+T+ D   V+  DL  
Sbjct: 24  YDRQLRIWGEVGQAALEEASICLLNCGPTGSEALKNLVLGGVGSITVVDGSKVQFGDLGN 83

Query: 344 NFFLSENDVGQNRAQACVQKLQELNNAV 427
           NF +    VGQ++A++    LQELN++V
Sbjct: 84  NFMVDAKSVGQSKAKSVCAFLQELNDSV 111

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>RHC31_YEAST (Q06624) DNA damage tolerance protein RHC31 (RAD31 homolog)|
          Length = 347

 Score = 59.7 bits (143), Expect = 3e-09
 Identities = 32/100 (32%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
 Frame = +2

Query: 128 MARRGNEIDED---LHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSV 298
           M  +  ++ ED   L+ RQ+ ++G      +  + VL+  L  +G+EI K++VL+G+  +
Sbjct: 1   MDMKVEKLSEDEIALYDRQIRLWGMTAQANMRSAKVLLINLGAIGSEITKSIVLSGIGHL 60

Query: 299 TLHDDGNVELWDLSGNFFLSENDVGQNRAQACVQKLQELN 418
           T+ D   V   DL   FF+   DVGQ +  A  +++Q+LN
Sbjct: 61  TILDGHMVTEEDLGSQFFIGSEDVGQWKIDATKERIQDLN 100

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>RAD31_SCHPO (P79064) DNA damage tolerance protein rad31|
          Length = 307

 Score = 58.2 bits (139), Expect = 9e-09
 Identities = 35/95 (36%), Positives = 51/95 (53%)
 Frame = +2

Query: 161 LHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLS 340
           L+ RQ+ ++G    + L  S VL+     L  EIAKNLVL+G+  + + D   V   D+ 
Sbjct: 13  LYDRQIRLWGFNAQQALKQSRVLLITASPLANEIAKNLVLSGIGKLCVLDSMTVYEKDVE 72

Query: 341 GNFFLSENDVGQNRAQACVQKLQELNNAVLVSALT 445
             FF+  +D+GQ RA    +KL ELN  V +   T
Sbjct: 73  EQFFIEASDIGQLRANVFKKKLHELNPLVEIDTDT 107

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>ULA1_MACFA (Q4R3L6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid|
           protein-binding protein 1) (Amyloid beta precursor
           protein-binding protein 1, 59 kDa) (APP-BP1)
          Length = 510

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 29/84 (34%), Positives = 44/84 (52%)
 Frame = +2

Query: 128 MARRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLH 307
           MA+ G  + E  + RQL ++G    + L  ++V +      G EI KNLVL G+ S T+ 
Sbjct: 1   MAQPGKLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTII 60

Query: 308 DDGNVELWDLSGNFFLSENDVGQN 379
           D   V   D   NFFL  + +G++
Sbjct: 61  DGNQVSGEDAGNNFFLQRSSIGKS 84

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>UBA3_CAEEL (Q19360) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)|
           (Ubiquitin-activating enzyme 3 homolog) (Ectopic
           membrane ruffles in embryo protein 1)
          Length = 430

 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 25/77 (32%), Positives = 46/77 (59%)
 Frame = +2

Query: 182 VYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSGNFFLSE 361
           V G E  + L  + +LV G  GLG E+ KNL L+G +++ + D   +++ +L+  F   E
Sbjct: 31  VPGPENFEALQNTKILVIGAGGLGCELLKNLALSGFRTIEVIDMDTIDVSNLNRQFLFRE 90

Query: 362 NDVGQNRAQACVQKLQE 412
           +DVG+++A+     +Q+
Sbjct: 91  SDVGKSKAEVAAAFVQQ 107

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>HESA2_ANAVT (P46048) Protein hesA, vegetative|
          Length = 265

 Score = 52.0 bits (123), Expect = 7e-07
 Identities = 29/86 (33%), Positives = 50/86 (58%)
 Frame = +2

Query: 185 YGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSGNFFLSEN 364
           +G+E  +RL  + VLV+G+ GLG   A  L +AGV  + L   G + L D++    +S++
Sbjct: 21  FGQEAQQRLKSATVLVTGVGGLGGTAALYLAIAGVGRLILVRGGELRLDDMNRQILMSDD 80

Query: 365 DVGQNRAQACVQKLQELNNAVLVSAL 442
            VG+ R     ++L+++N  V V A+
Sbjct: 81  WVGKPRVFKAKKRLEDINPDVEVEAI 106

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>THIF_ECOLI (P30138) Adenylyltransferase thiF (EC 2.7.7.-)|
          Length = 251

 Score = 52.0 bits (123), Expect = 7e-07
 Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
 Frame = +2

Query: 143 NEIDEDLHSRQLAV--YGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDG 316
           N+ D   +SRQ+ +     +  ++L  S VL+ GL GLG   A  L  AGV ++ L DD 
Sbjct: 2   NDRDFMRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 61

Query: 317 NVELWDLSGNFFLSENDVGQNRAQACVQKLQELNNAVLVSAL 442
           +V L +L      +  D+ + ++Q   Q+L +LN  + ++AL
Sbjct: 62  DVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL 103

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>UBA3_SCHPO (Q09765) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)|
           (Ubiquitin-activating enzyme E1 3)
          Length = 444

 Score = 49.7 bits (117), Expect = 3e-06
 Identities = 21/73 (28%), Positives = 43/73 (58%)
 Frame = +2

Query: 194 ETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSGNFFLSENDVG 373
           ET+K  F S +L+ G  GLG EI K+L L+G + +++ D   +++ +L+  F  +E+++ 
Sbjct: 37  ETLKSAFSSKILIIGAGGLGCEILKDLALSGFRDLSVIDMDTIDITNLNRQFLFNESNID 96

Query: 374 QNRAQACVQKLQE 412
           + +A      + +
Sbjct: 97  EPKANVAASMIMK 109

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>ULE1B_MOUSE (Q9Z1F9) Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating|
           enzyme subunit 2) (Anthracycline-associated resistance
           ARX)
          Length = 638

 Score = 49.3 bits (116), Expect = 4e-06
 Identities = 25/83 (30%), Positives = 44/83 (53%)
 Frame = +2

Query: 191 RETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSGNFFLSENDV 370
           RE  + + G  VLV G  G+G E+ KNLVL G   + L D   +++ +L+  F   +  V
Sbjct: 9   RELAEAVSGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHV 68

Query: 371 GQNRAQACVQKLQELNNAVLVSA 439
           G+++AQ   + + + +    + A
Sbjct: 69  GRSKAQVAKESVLQFHPQANIEA 91

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>HESA1_ANAVT (P46049) Protein hesA, heterocyst|
          Length = 267

 Score = 48.5 bits (114), Expect = 7e-06
 Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
 Frame = +2

Query: 164 HSRQLAV--YGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDL 337
           +SRQ+ +  +G    KRL  + VLV+G+ GLG   A  L +AGV  + L   G++ L D+
Sbjct: 12  YSRQMMLPNFGEAAQKRLKSATVLVTGVGGLGGTAALYLAVAGVGRLILVRGGDLRLDDM 71

Query: 338 SGNFFLSENDVGQNRAQACVQKLQELNNAVLVSAL 442
           +    ++++ VG+ R     + LQ +N  + +  +
Sbjct: 72  NRQVLMTDDWVGKPRVFKAKETLQAINPDIQIETI 106

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>ULE1B_HUMAN (Q9UBT2) Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating|
           enzyme subunit 2) (Anthracycline-associated resistance
           ARX)
          Length = 640

 Score = 48.5 bits (114), Expect = 7e-06
 Identities = 24/72 (33%), Positives = 40/72 (55%)
 Frame = +2

Query: 191 RETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSGNFFLSENDV 370
           RE  + + G  VLV G  G+G E+ KNLVL G   + L D   +++ +L+  F   +  V
Sbjct: 9   RELAEAVAGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHV 68

Query: 371 GQNRAQACVQKL 406
           G+++AQ   + +
Sbjct: 69  GRSKAQVAKESV 80

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>HESA_ANASP (P18500) Protein hesA|
          Length = 252

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 26/86 (30%), Positives = 46/86 (53%)
 Frame = +2

Query: 185 YGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSGNFFLSEN 364
           +G    KRL  + VLV+G+ GLG   A  L +AGV  + L   G++ L D++    ++++
Sbjct: 6   FGEAAQKRLKSATVLVTGVGGLGGTAALYLAVAGVGRLILVRGGDLRLDDMNRQVLMTDD 65

Query: 365 DVGQNRAQACVQKLQELNNAVLVSAL 442
            VG+ R     + LQ +N  + +  +
Sbjct: 66  WVGKPRVFKAKETLQAINPDIQIETI 91

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>ULA1_SCHPO (Q9UT93) NEDD8-activating enzyme E1 regulatory subunit|
           (Ubiquitin-like activation protein 1)
           (Ubiquitin-activating enzyme E1-like 1)
          Length = 500

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 26/85 (30%), Positives = 45/85 (52%)
 Frame = +2

Query: 164 HSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSG 343
           + RQ+ ++  E    +  S+V +     +G E  KNL+L G+ S  + DD +V+      
Sbjct: 10  YDRQVRLWKAEGQNAIEKSHVCLLYANTVGCEALKNLILPGIGSFAVVDDTSVDFSMDGM 69

Query: 344 NFFLSENDVGQNRAQACVQKLQELN 418
           NFF+  +  G++RA+     LQ+LN
Sbjct: 70  NFFIQYDQEGKSRARCTASLLQQLN 94

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>HESA_PLEBO (P46037) Protein hesA|
          Length = 277

 Score = 45.1 bits (105), Expect = 8e-05
 Identities = 27/99 (27%), Positives = 48/99 (48%)
 Frame = +2

Query: 146 EIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVE 325
           E++       L  +  +  +RL     LV+G+ GLG   A  L +AG+  + L   G + 
Sbjct: 8   ELERYRRQMMLPGFDEDAQRRLKSFTALVTGVGGLGGTAALYLAVAGIGKLILVRGGELR 67

Query: 326 LWDLSGNFFLSENDVGQNRAQACVQKLQELNNAVLVSAL 442
           L D++    ++ + VGQ R     + L+++N  V V A+
Sbjct: 68  LDDMNRQVLMTHDTVGQPRVFKAKETLEKINPDVEVEAV 106

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>UBA3_YEAST (Q99344) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)|
           (Ubiquitin-activating enzyme E1 3) (RUB1-activating
           enzyme E1) (Ubiquitin-like protein-activating enzyme)
          Length = 299

 Score = 45.1 bits (105), Expect = 8e-05
 Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
 Frame = +2

Query: 224 VLVSGLQGLGAEIAKNL-VLAGVKSVTLHDDGNVELWDLSGNFFLSENDVGQNRAQACVQ 400
           +LV G  GLG EI KNL +L+ VK V + D   +EL +L+  F   + D+G+ +AQ   Q
Sbjct: 5   ILVLGAGGLGCEILKNLTMLSFVKQVHIVDIDTIELTNLNRQFLFCDKDIGKPKAQVAAQ 64

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>UBA3_RAT (Q99MI7) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)|
           (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme
           E1C) (Ubiquitin-activating enzyme E1C)
          Length = 462

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 21/63 (33%), Positives = 36/63 (57%)
 Frame = +2

Query: 224 VLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSGNFFLSENDVGQNRAQACVQK 403
           VLV G  GLG E+ KNL L+G + + + D   +++ +L+  F     DVG+ +A+   + 
Sbjct: 72  VLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDVGRPKAEVAAEF 131

Query: 404 LQE 412
           L +
Sbjct: 132 LND 134

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>UBA3_MOUSE (Q8C878) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)|
           (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme
           E1C) (Ubiquitin-activating enzyme E1C)
          Length = 462

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 21/63 (33%), Positives = 36/63 (57%)
 Frame = +2

Query: 224 VLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSGNFFLSENDVGQNRAQACVQK 403
           VLV G  GLG E+ KNL L+G + + + D   +++ +L+  F     DVG+ +A+   + 
Sbjct: 72  VLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDVGRPKAEVAAEF 131

Query: 404 LQE 412
           L +
Sbjct: 132 LND 134

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>UBA3_PONPY (Q5R4A0) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)|
           (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme
           E1C) (Ubiquitin-activating enzyme E1C)
          Length = 463

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 20/63 (31%), Positives = 36/63 (57%)
 Frame = +2

Query: 224 VLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSGNFFLSENDVGQNRAQACVQK 403
           VLV G  GLG E+ KNL L+G + + + D   +++ +L+  F     D+G+ +A+   + 
Sbjct: 72  VLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEF 131

Query: 404 LQE 412
           L +
Sbjct: 132 LND 134

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>UBA3_HUMAN (Q8TBC4) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)|
           (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme
           E1C) (Ubiquitin-activating enzyme E1C)
          Length = 463

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 20/63 (31%), Positives = 36/63 (57%)
 Frame = +2

Query: 224 VLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSGNFFLSENDVGQNRAQACVQK 403
           VLV G  GLG E+ KNL L+G + + + D   +++ +L+  F     D+G+ +A+   + 
Sbjct: 72  VLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEF 131

Query: 404 LQE 412
           L +
Sbjct: 132 LND 134

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>MOEB_ECOLI (P12282) Molybdopterin biosynthesis protein moeB|
          Length = 249

 Score = 41.6 bits (96), Expect = 9e-04
 Identities = 27/83 (32%), Positives = 43/83 (51%)
 Frame = +2

Query: 188 GRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSGNFFLSEND 367
           G+E +K    S VL+ GL GLG   ++ L  AGV ++TL D   V L +L      S+  
Sbjct: 25  GQEALK---DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDAT 81

Query: 368 VGQNRAQACVQKLQELNNAVLVS 436
           VGQ + ++    L  +N  + ++
Sbjct: 82  VGQPKVESARDALTRINPHIAIT 104

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>MOCS3_HUMAN (O95396) Molybdenum cofactor synthesis protein 3 (Molybdopterin|
           synthase sulfurylase) (MPT synthase sulfurylase)
          Length = 460

 Score = 41.6 bits (96), Expect = 9e-04
 Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
 Frame = +2

Query: 164 HSRQLAV--YGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDL 337
           +SRQL +   G     RL  + VL+ G  GLG  +A+ L  AGV  + L D   VE+ +L
Sbjct: 63  YSRQLVLPELGVHGQLRLGTACVLIVGCGGLGCPLAQYLAAAGVGRLGLVDYDVVEMSNL 122

Query: 338 SGNFFLSENDVGQNRAQACVQKLQELNNAV 427
           +      E   GQ +A +    L+ LN+AV
Sbjct: 123 ARQVLHGEALAGQAKAFSAAASLRRLNSAV 152

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>UBA3_DROME (Q9V6U8) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)|
           (Ubiquitin-activating enzyme 3 homolog)
          Length = 450

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 19/59 (32%), Positives = 33/59 (55%)
 Frame = +2

Query: 224 VLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSGNFFLSENDVGQNRAQACVQ 400
           VL+ G  GLG E+ K+L L G  ++ + D   +EL +L+  F     D+G ++A+   +
Sbjct: 51  VLIIGAGGLGCELLKDLALMGFGNLHVIDMDTIELSNLNRQFLFRRTDIGASKAECAAR 109

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>YABA_SCHPO (Q09810) Hypothetical protein C2G11.10c in chromosome I|
          Length = 401

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
 Frame = +2

Query: 140 GNEIDEDLHSRQLAVYGRETMKRLFG---------SNVLVSGLQGLGAEIAKNLVLAGVK 292
           G E+  D +SR    YGR+ +    G         S+VLV G  GLG    + LV AG+ 
Sbjct: 13  GLELSLDEYSR----YGRQMLLSEIGLPGQLSLKRSSVLVIGAGGLGCPAMQYLVAAGIG 68

Query: 293 SVTLHDDGNVELWDLSGNFFLSENDVGQNRAQACVQKLQELNNAVLVS 436
           ++ + D   V+  +L      S +  G ++A +  Q L++LN  V+++
Sbjct: 69  TLGIMDGDVVDKSNLHRQIIHSTSKQGMHKAISAKQFLEDLNPNVIIN 116

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>YCXH_PORPU (P51335) Hypothetical 43.4 kDa protein in rpl9-rpl11 intergenic|
           region (ORF382)
          Length = 382

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 21/82 (25%), Positives = 45/82 (54%)
 Frame = +2

Query: 173 QLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSGNFF 352
           Q+ + G+E +K+   S++L  G  GLG+     L  +G+  + + D+  +++ +L     
Sbjct: 27  QIKLEGQERLKQ---SSILCVGAGGLGSPALIYLAASGIGKIGIVDNDIIDISNLQRQIL 83

Query: 353 LSENDVGQNRAQACVQKLQELN 418
            + ND+G ++A    +K+ E+N
Sbjct: 84  YTVNDIGLSKAYIAKKKILEIN 105

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>MOEB_SALTY (Q56067) Molybdopterin biosynthesis protein moeB|
          Length = 249

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
 Frame = +2

Query: 164 HSRQLAVYGR--ETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDL 337
           ++RQ+ + G   E  + L  + VLV GL GLG    + L  AGV  +TL D   V + +L
Sbjct: 12  YNRQIILRGFDFEGQEALKDARVLVVGLGGLGCAATQYLAGAGVGQLTLLDFDTVSVSNL 71

Query: 338 SGNFFLSENDVGQNRAQACVQKLQELNNAVLVS 436
                 S+  VGQ + ++    L  +N  + ++
Sbjct: 72  QRQTLHSDATVGQPKVESARDALARINPHITIT 104

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>YKC7_YEAST (P36101) Protein YKL027W|
          Length = 447

 Score = 37.7 bits (86), Expect = 0.013
 Identities = 20/76 (26%), Positives = 41/76 (53%)
 Frame = +2

Query: 188 GRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSGNFFLSEND 367
           G +T+++L    V+V G  G+G+ +  +LV +G + + + D   V L  L+ +     ND
Sbjct: 77  GEDTIEKLSNQYVVVVGAGGVGSWVVNSLVRSGCRKIRVVDFDQVSLSSLNRHSCAILND 136

Query: 368 VGQNRAQACVQKLQEL 415
           VG  + +   + ++E+
Sbjct: 137 VGTPKVECLRRHMREI 152

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>YGDL_ECOLI (Q46927) Hypothetical protein ygdL|
          Length = 268

 Score = 37.7 bits (86), Expect = 0.013
 Identities = 17/79 (21%), Positives = 45/79 (56%)
 Frame = +2

Query: 182 VYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSGNFFLSE 361
           +YG + ++    +++ V G+ G+G+  A+ L   G+ ++TL D  +V + + +       
Sbjct: 19  LYGEKALQLFADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALR 78

Query: 362 NDVGQNRAQACVQKLQELN 418
           ++VG  +A+   ++++++N
Sbjct: 79  DNVGLAKAEVMAERIRQIN 97

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>MOC3_ARATH (Q9ZNW0) Molybdenum cofactor synthesis protein 3 (Molybdopterin|
           synthase sulfurylase) (MPT synthase sulfurylase)
          Length = 464

 Score = 35.4 bits (80), Expect = 0.063
 Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
 Frame = +2

Query: 164 HSRQLAV--YGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDL 337
           +SRQL +  +  E    L  S+VLV G  GLG+     L   GV  + + D   VEL ++
Sbjct: 72  YSRQLLLPSFAVEGQSNLLKSSVLVIGAGGLGSPALLYLAACGVGQLGIIDHDVVELNNM 131

Query: 338 SGNFFLSENDVGQNRAQACVQKLQELNNAVLV 433
                 +E  +G  + ++     + +N+ + V
Sbjct: 132 HRQIIHTEAFIGHPKVKSAAAACRSINSTIKV 163

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>RPOC_WEIHE (P96177) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit) (Fragment)
          Length = 1046

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 19/62 (30%), Positives = 34/62 (54%)
 Frame = +2

Query: 119 DAAMARRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSV 298
           D +    GNE+ E L+ R L  Y ++++      + LV   + +  +IAK ++ AGV +V
Sbjct: 759 DVSAIMNGNEVIESLYERILGRYAQKSVFEPQTGDKLVGHNEMITEDIAKRIIEAGVTTV 818

Query: 299 TL 304
           T+
Sbjct: 819 TI 820

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>MOEB_HAEIN (P45211) Molybdopterin biosynthesis protein moeB|
          Length = 243

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 20/80 (25%), Positives = 40/80 (50%)
 Frame = +2

Query: 203 KRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSGNFFLSENDVGQNR 382
           ++L  S +L+ GL GLG   ++ L  AGV ++TL D   V L +L       +  +   +
Sbjct: 27  EKLKASKMLIVGLGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHCDARLNMPK 86

Query: 383 AQACVQKLQELNNAVLVSAL 442
            ++    L+++N  + +  +
Sbjct: 87  VESAKIALEQINPHINIETI 106

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>UE1D1_PONPY (Q5R8X4) Ubiquitin-activating enzyme E1 domain-containing protein 1|
           (UFM1-activating enzyme)
          Length = 404

 Score = 33.9 bits (76), Expect = 0.18
 Identities = 21/69 (30%), Positives = 36/69 (52%)
 Frame = +2

Query: 224 VLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSGNFFLSENDVGQNRAQACVQK 403
           V + G+ G+G+  A+ L   G+  + L D   VEL +++  FF   +  G ++ QA    
Sbjct: 76  VAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFF-QPHQAGLSKVQAAEHT 134

Query: 404 LQELNNAVL 430
           L+ +N  VL
Sbjct: 135 LRNINPDVL 143

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>UE1D1_HUMAN (Q9GZZ9) Ubiquitin-activating enzyme E1 domain-containing protein 1|
           (UFM1-activating enzyme) (Ubiquitin-activating enzyme 5)
           (ThiFP1)
          Length = 404

 Score = 33.9 bits (76), Expect = 0.18
 Identities = 21/69 (30%), Positives = 36/69 (52%)
 Frame = +2

Query: 224 VLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSGNFFLSENDVGQNRAQACVQK 403
           V + G+ G+G+  A+ L   G+  + L D   VEL +++  FF   +  G ++ QA    
Sbjct: 76  VAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFF-QPHQAGLSKVQAAEHT 134

Query: 404 LQELNNAVL 430
           L+ +N  VL
Sbjct: 135 LRNINPDVL 143

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>UE1D1_RAT (Q5M7A4) Ubiquitin-activating enzyme E1 domain-containing protein 1|
           (UFM1-activating enzyme)
          Length = 403

 Score = 33.5 bits (75), Expect = 0.24
 Identities = 21/69 (30%), Positives = 35/69 (50%)
 Frame = +2

Query: 224 VLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSGNFFLSENDVGQNRAQACVQK 403
           V + G+ G+G+  A+ L   G+  + L D   VEL +++  FF      G ++ QA    
Sbjct: 74  VAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFF-QPYQAGMSKVQAAEHT 132

Query: 404 LQELNNAVL 430
           L+ +N  VL
Sbjct: 133 LRSINPDVL 141

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>ATG7_EMENI (Q5AWA2) Autophagy-related protein 7 (Autophagy-related|
           E1-like-activating enzyme atg7)
          Length = 617

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 14/41 (34%), Positives = 28/41 (68%)
 Frame = +2

Query: 200 MKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNV 322
           ++++ G+  L+ G   LG+ +A+NL+  GV+ +T  D+G+V
Sbjct: 332 LEKIKGTKCLLLGAGTLGSYVARNLMAWGVRKITFVDNGSV 372

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>RPOC_WEIPA (P96178) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit) (Fragment)
          Length = 1054

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 18/62 (29%), Positives = 33/62 (53%)
 Frame = +2

Query: 119 DAAMARRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSV 298
           D      GNE+ E L+ R L  Y ++++        LV+  + +  +IAK ++ AG+ +V
Sbjct: 759 DVTAIMNGNEVIEPLYERILGRYAQKSVFDPETGETLVNHNEMITEDIAKRIIEAGITTV 818

Query: 299 TL 304
           T+
Sbjct: 819 TI 820

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>ULA1_YEAST (Q12059) NEDD8-activating enzyme E1 regulatory subunit|
           (Ubiquitin-like activation protein 1)
           (Ubiquitin-activating enzyme E1-like 1) (E1
           N-terminus-related protein 2)
          Length = 462

 Score = 32.7 bits (73), Expect = 0.41
 Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = +2

Query: 164 HSRQLAVYGRETMKRLFGSNVLVSG-LQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLS 340
           + RQL ++G      L  S V V G    L  E+ KNLVLAG+ S+T      VE    S
Sbjct: 4   YDRQLRLWGALGQDSLNRSRVCVVGPATPLLQEVFKNLVLAGISSLTWL---KVECAVQS 60

Query: 341 GNFFLSE 361
           G+ FL+E
Sbjct: 61  GSLFLAE 67

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>ATG7_CANGA (Q6FQY7) Autophagy-related protein 7 (Autophagy-related|
           E1-like-activating enzyme ATG7)
          Length = 623

 Score = 32.7 bits (73), Expect = 0.41
 Identities = 19/66 (28%), Positives = 34/66 (51%)
 Frame = +2

Query: 218 SNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSGNFFLSENDVGQNRAQACV 397
           + VL+ G   LG   A++L+  G +++TL D+G V   +         +DVG+ +A A  
Sbjct: 321 NKVLILGSGTLGCYTARSLMAWGCRNITLVDNGRVSYSNPVRQPLFEFSDVGKEKAVAAA 380

Query: 398 QKLQEL 415
             L+ +
Sbjct: 381 ASLKRV 386

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>RPOC_BACHK (Q6HPR5) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
            beta' subunit) (Transcriptase beta' chain) (RNA
            polymerase beta' subunit)
          Length = 1203

 Score = 32.3 bits (72), Expect = 0.53
 Identities = 18/57 (31%), Positives = 33/57 (57%)
 Frame = +2

Query: 134  RRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTL 304
            + GNE+ E L+ R +  + R+T+K      VLV+  Q +  +IA  +  +GV++V +
Sbjct: 830  KEGNEVIESLYDRLVGRFARKTVKHPETGEVLVAENQLITEDIAHIVENSGVETVNI 886

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>RPOC_BACCZ (Q63H97) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
            beta' subunit) (Transcriptase beta' chain) (RNA
            polymerase beta' subunit)
          Length = 1203

 Score = 32.3 bits (72), Expect = 0.53
 Identities = 18/57 (31%), Positives = 33/57 (57%)
 Frame = +2

Query: 134  RRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTL 304
            + GNE+ E L+ R +  + R+T+K      VLV+  Q +  +IA  +  +GV++V +
Sbjct: 830  KEGNEVIESLYDRLVGRFARKTVKHPETGEVLVAENQLITEDIAHIVENSGVETVNI 886

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>RPOC_BACCR (Q81J47) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
            beta' subunit) (Transcriptase beta' chain) (RNA
            polymerase beta' subunit)
          Length = 1203

 Score = 32.3 bits (72), Expect = 0.53
 Identities = 18/57 (31%), Positives = 33/57 (57%)
 Frame = +2

Query: 134  RRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTL 304
            + GNE+ E L+ R +  + R+T+K      VLV+  Q +  +IA  +  +GV++V +
Sbjct: 830  KEGNEVIESLYDRLVGRFARKTVKHPETGEVLVAENQLITEDIAHIVENSGVETVNI 886

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>RPOC_BACC1 (Q73FA3) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
            beta' subunit) (Transcriptase beta' chain) (RNA
            polymerase beta' subunit)
          Length = 1203

 Score = 32.3 bits (72), Expect = 0.53
 Identities = 18/57 (31%), Positives = 33/57 (57%)
 Frame = +2

Query: 134  RRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTL 304
            + GNE+ E L+ R +  + R+T+K      VLV+  Q +  +IA  +  +GV++V +
Sbjct: 830  KEGNEVIESLYDRLVGRFARKTVKHPETGEVLVAENQLITEDIAHIVENSGVETVNI 886

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>RPOC_BACAN (P77819) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
            beta' subunit) (Transcriptase beta' chain) (RNA
            polymerase beta' subunit)
          Length = 1203

 Score = 32.3 bits (72), Expect = 0.53
 Identities = 18/57 (31%), Positives = 33/57 (57%)
 Frame = +2

Query: 134  RRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTL 304
            + GNE+ E L+ R +  + R+T+K      VLV+  Q +  +IA  +  +GV++V +
Sbjct: 830  KEGNEVIESLYDRLVGRFARKTVKHPETGEVLVAENQLITEDIAHIVENSGVETVNI 886

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>UE1D1_MOUSE (Q8VE47) Ubiquitin-activating enzyme E1 domain-containing protein 1|
           (UFM1-activating enzyme)
          Length = 403

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
 Frame = +2

Query: 149 IDEDLHSRQLAVYGRETM---KRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGN 319
           +D + +SR +A+     +   K++    V + G+ G+G+  A+ L   G+  + L D   
Sbjct: 46  LDSNPYSRLMALKRMGIVSDYKKIRTYAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 105

Query: 320 VELWDLSGNFFLSENDVGQNRAQACVQKLQELNNAVL 430
           VEL +++  FF      G ++  A    L+ +N  VL
Sbjct: 106 VELANMNRLFF-QPYQAGLSKVHAAEHTLRNINPDVL 141

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>ATG7_ASHGO (Q756G8) Autophagy-related protein 7 (Autophagy-related|
           E1-like-activating enzyme ATG7)
          Length = 625

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 17/64 (26%), Positives = 33/64 (51%)
 Frame = +2

Query: 224 VLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSGNFFLSENDVGQNRAQACVQK 403
           VL+ G   LG  +A++L+  GV+ +T  D+G+V   +       +  D GQ +A +    
Sbjct: 318 VLLLGAGTLGCYVARSLLAWGVRKITFVDNGSVSYSNPVRQPLFNFTDCGQPKATSAAAA 377

Query: 404 LQEL 415
           ++ +
Sbjct: 378 MKAI 381

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>RLUE_XANAC (Q8PQN3) Ribosomal large subunit pseudouridine synthase E (EC|
           5.4.99.-) (rRNA-uridine isomerase E) (rRNA
           pseudouridylate synthase E)
          Length = 190

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 24/100 (24%), Positives = 34/100 (34%), Gaps = 12/100 (12%)
 Frame = +1

Query: 46  RQANPRFRGGRTRWIXXXXXXXXXXXXXXTEGERDRRGPAQ-------SPARRLWPRDHE 204
           R  +PR +  +T W+               +G     GP +        PA +LWPRD  
Sbjct: 60  RLTDPRHKQPKTYWVQVEGAPQAEHLQALRDGVALNDGPTRPAQVRMLDPAPQLWPRDPP 119

Query: 205 APLRLQRPRLW-----TSGSRCRDRKEPCPRGCQVCNLAR 309
             +R   P  W     T G   + R+     G     L R
Sbjct: 120 VRVRKTVPDAWLELQITEGRNRQVRRMTAAVGLPTLRLVR 159

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>RFIP1_MOUSE (Q9D620) Rab11 family-interacting protein 1 (Rab11-FIP1)|
           (Rab-coupling protein)
          Length = 645

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 17/45 (37%), Positives = 20/45 (44%)
 Frame = +3

Query: 24  SPASFPDATGESKVSRRSHALDLTRQLPGRKETQPWHGGGTRSTR 158
           SP++ P   G     RR H    T  L  R   +P  GGGT S R
Sbjct: 340 SPSNSPSPQG----FRRKHLFSSTENLAARSPKEPGEGGGTSSDR 380

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>UBA4_YEAST (P38820) E1-like URM1 activator protein (Ubiquitin-like protein|
           activator 4)
          Length = 440

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 21/71 (29%), Positives = 33/71 (46%)
 Frame = +2

Query: 206 RLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSGNFFLSENDVGQNRA 385
           +L  + VLV G  GLG      L  AGV  + + D+  VE  +L        + VG  + 
Sbjct: 64  KLKNTKVLVVGAGGLGCPALPYLAGAGVGQIGIVDNDVVETSNLHRQVLHDSSRVGMLKC 123

Query: 386 QACVQKLQELN 418
           ++  Q + +LN
Sbjct: 124 ESARQYITKLN 134

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>K1H1_MOUSE (Q61765) Keratin, type I cuticular Ha1 (Hair keratin, type I Ha1)|
           (HKA-1)
          Length = 416

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -1

Query: 145 VPPPCHGCVSFLPGSCRV 92
           VPP CHGC   LPG+C +
Sbjct: 22  VPPSCHGCT--LPGACNI 37

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>ATG7_YEAST (P38862) Autophagy-related protein 7 (Autophagy-related|
           E1-like-activating enzyme ATG7) (Cytoplasm to vacuole
           targeting protein 2) (ATG12 activating E2-like enzyme)
          Length = 630

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 16/66 (24%), Positives = 32/66 (48%)
 Frame = +2

Query: 218 SNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSGNFFLSENDVGQNRAQACV 397
           + VL+ G   LG  +++ L+  GV+ +T  D+G V   +       +  D G+ +A+   
Sbjct: 325 TKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAA 384

Query: 398 QKLQEL 415
             L+ +
Sbjct: 385 ASLKRI 390

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>YBHO_SALTY (Q8ZQP4) Putative cardiolipin synthetase ybhO (EC 2.7.8.-)|
           (Cardiolipin synthase) (CL synthase)
          Length = 413

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
 Frame = +1

Query: 160 PAQSPARRLWPRDHEA-----PLRLQRPRLWTSGSRCRD 261
           P QSPARR W R H+A     P   Q   +W      RD
Sbjct: 168 PGQSPARRWWKRHHQAEENRHPGEAQALFVWRDNEEHRD 206

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>YBHO_SALTI (Q8Z883) Putative cardiolipin synthetase ybhO (EC 2.7.8.-)|
           (Cardiolipin synthase) (CL synthase)
          Length = 413

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
 Frame = +1

Query: 160 PAQSPARRLWPRDHEA-----PLRLQRPRLWTSGSRCRD 261
           P QSPARR W R H+A     P   Q   +W      RD
Sbjct: 168 PGQSPARRWWKRHHQAEENRHPGEAQALFVWRDNEEHRD 206

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>K1HA_HUMAN (O76009) Keratin, type I cuticular Ha3-I (Hair keratin, type I|
           Ha3-I)
          Length = 404

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -1

Query: 145 VPPPCHGCVSFLPGSCRV 92
           VPP CHGC   LPG+C +
Sbjct: 22  VPPSCHGCT--LPGACNI 37

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>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 27/88 (30%), Positives = 31/88 (35%)
 Frame = +1

Query: 10  RRTVPRLLPSPTRQANPRFRGGRTRWIXXXXXXXXXXXXXXTEGERDRRGPAQSPARRLW 189
           RRT PR +P P R    R  G R R                +   R R  P + P R   
Sbjct: 323 RRTPPRRMPPPPRHRRSRSPGRRRR----RSSASLSGSSSSSSSSRSRSPPKKPPKRT-- 376

Query: 190 PRDHEAPLRLQRPRLWTSGSRCRDRKEP 273
                +P R  R RL  S S  R R  P
Sbjct: 377 ----SSPPRKTR-RLSPSASPPRRRHRP 399

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>RPOC_LEUME (P94892) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
            beta' subunit) (Transcriptase beta' chain) (RNA
            polymerase beta' subunit) (Fragment)
          Length = 989

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 11/112 (9%)
 Frame = +2

Query: 110  EEGDAAMA-RRGNEIDEDLHSRQLAVYGRETMKRLFGSNV---LVSGLQGLGAEIAKNLV 277
            + G AA A   G  + E L+ R   + GR  MK +F       + S  + +  ++AK +V
Sbjct: 755  DRGVAAQAIMDGTSVVEPLYVR---ILGRYAMKSVFDPETDEKICSRNEMIDEDVAKKIV 811

Query: 278  LAGVKSVTLHD------DGNVELWDLSGNFFLSEN-DVGQNRAQACVQKLQE 412
             AG+K VT+        +  V + D   N    E  +VG+       Q + E
Sbjct: 812  NAGIKEVTIRSVFTSTTEHGVSVLDYGRNLASGEEVEVGEAVGTVAAQSIGE 863

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>Y1643_STRP8 (Q8P000) UPF0144 protein spyM18_1643|
          Length = 535

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
 Frame = +2

Query: 107 REEGDAAMARRGNEIDEDLHSRQLAVYGRETMKRLFGSNVL-----VSGLQG-LGAEIAK 268
           RE G+AA    G     +LH   + + GR   +  FG NVL     V  L G L  E+ +
Sbjct: 315 REYGEAAAYEIGAP---NLHPDLIKIMGRLQFRTSFGQNVLRHSVEVGKLAGILAGELGE 371

Query: 269 NLVLAGVKSVTLHDDG 316
           N+ LA  ++  LHD G
Sbjct: 372 NVALAR-RAGFLHDMG 386

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>Y1633_STRP1 (P67284) UPF0144 protein SPy1633/M5005_Spy1342|
          Length = 535

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
 Frame = +2

Query: 107 REEGDAAMARRGNEIDEDLHSRQLAVYGRETMKRLFGSNVL-----VSGLQG-LGAEIAK 268
           RE G+AA    G     +LH   + + GR   +  FG NVL     V  L G L  E+ +
Sbjct: 315 REYGEAAAYEIGAP---NLHPDLIKIMGRLQFRTSFGQNVLRHSVEVGKLAGILAGELGE 371

Query: 269 NLVLAGVKSVTLHDDG 316
           N+ LA  ++  LHD G
Sbjct: 372 NVALAR-RAGFLHDMG 386

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>Y1388_STRP6 (Q5XAP0) UPF0144 protein M6_Spy1388|
          Length = 535

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
 Frame = +2

Query: 107 REEGDAAMARRGNEIDEDLHSRQLAVYGRETMKRLFGSNVL-----VSGLQG-LGAEIAK 268
           RE G+AA    G     +LH   + + GR   +  FG NVL     V  L G L  E+ +
Sbjct: 315 REYGEAAAYEIGAP---NLHPDLIKIMGRLQFRTSFGQNVLRHSVEVGKLAGILAGELGE 371

Query: 269 NLVLAGVKSVTLHDDG 316
           N+ LA  ++  LHD G
Sbjct: 372 NVALAR-RAGFLHDMG 386

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>Y1376_STRP3 (P67285) UPF0144 protein SpyM3_1376/SPs0486|
          Length = 535

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
 Frame = +2

Query: 107 REEGDAAMARRGNEIDEDLHSRQLAVYGRETMKRLFGSNVL-----VSGLQG-LGAEIAK 268
           RE G+AA    G     +LH   + + GR   +  FG NVL     V  L G L  E+ +
Sbjct: 315 REYGEAAAYEIGAP---NLHPDLIKIMGRLQFRTSFGQNVLRHSVEVGKLAGILAGELGE 371

Query: 269 NLVLAGVKSVTLHDDG 316
           N+ LA  ++  LHD G
Sbjct: 372 NVALAR-RAGFLHDMG 386

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>K1H1_HUMAN (Q15323) Keratin, type I cuticular Ha1 (Hair keratin, type I Ha1)|
          Length = 416

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -2

Query: 375 CPTSFSERKKLPDKSHSSTLPSSCKV 298
           C TS S R  +P   HS TLP +C +
Sbjct: 12  CRTSCSSRPCVPPSCHSCTLPGACNI 37

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>RPOC_LISGR (P77882) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
            beta' subunit) (Transcriptase beta' chain) (RNA
            polymerase beta' subunit) (Fragment)
          Length = 1053

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 16/57 (28%), Positives = 30/57 (52%)
 Frame = +2

Query: 134  RRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTL 304
            R G EI E L  R    Y R+T++    + ++V     +  +IA  ++ AG++ V++
Sbjct: 830  REGTEIIEPLEERLEGRYARKTIRHPETNEIIVKENDLITEDIAVQIIGAGIEEVSI 886

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>RPOC_LEUPS (P94899) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
            beta' subunit) (Transcriptase beta' chain) (RNA
            polymerase beta' subunit) (Fragment)
          Length = 989

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 10/101 (9%)
 Frame = +2

Query: 140  GNEIDEDLHSRQLAVYGRETMKRLFGSNV---LVSGLQGLGAEIAKNLVLAGVKSVTLHD 310
            G  + E L+ R   + GR  MK +F       +VS  + +  ++AK +V AG++ VT+  
Sbjct: 766  GTSVVEPLYDR---ILGRYAMKSVFDPETGEKIVSRNEMIDEDVAKAIVNAGIEEVTIRS 822

Query: 311  ------DGNVELWDLSGNFFLSEN-DVGQNRAQACVQKLQE 412
                  +  V + D   N    E  +VG+       Q + E
Sbjct: 823  VFTSTTEHGVSVLDYGRNLASGEEVEVGEAVGTVAAQSIGE 863

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>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 27/90 (30%), Positives = 32/90 (35%)
 Frame = +1

Query: 10  RRTVPRLLPSPTRQANPRFRGGRTRWIXXXXXXXXXXXXXXTEGERDRRGPAQSPARRLW 189
           RRT PR +P P R    R    R R                +   R R  P + P R + 
Sbjct: 321 RRTPPRRMPPPPRHRRSRSPVRRRR----RSSASLSGSSSSSSSSRSRSPPKKPPKRTV- 375

Query: 190 PRDHEAPLRLQRPRLWTSGSRCRDRKEPCP 279
                +P R  R RL  S S  R R  P P
Sbjct: 376 ----SSPPRKTR-RLSPSASPPRRRHRPSP 400

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>SPFH1_PONPY (Q5RCJ9) SPFH domain-containing protein 1 precursor|
          Length = 346

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = -3

Query: 410 LVASVHKLELGFAQHHSPRGRSCLISPTAPHYH 312
           L AS+HK+E G    +  RG + L SP+ P YH
Sbjct: 19  LYASIHKIEEGHLAVYY-RGGALLTSPSGPGYH 50

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>SPFH1_MOUSE (Q91X78) SPFH domain-containing protein 1 precursor (KE04 protein|
           homolog)
          Length = 346

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = -3

Query: 410 LVASVHKLELGFAQHHSPRGRSCLISPTAPHYH 312
           L AS+HK+E G    +  RG + L SP+ P YH
Sbjct: 19  LYASIHKIEEGHLAVYY-RGGALLTSPSGPGYH 50

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>SPFH1_HUMAN (O75477) SPFH domain-containing protein 1 precursor (Protein KE04)|
          Length = 346

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = -3

Query: 410 LVASVHKLELGFAQHHSPRGRSCLISPTAPHYH 312
           L AS+HK+E G    +  RG + L SP+ P YH
Sbjct: 19  LYASIHKIEEGHLAVYY-RGGALLTSPSGPGYH 50

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>ITA10_HUMAN (O75578) Integrin alpha-10 precursor|
          Length = 1167

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 17/58 (29%), Positives = 25/58 (43%)
 Frame = +2

Query: 239  LQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSGNFFLSENDVGQNRAQACVQKLQE 412
            +Q LG  +   L+++ +     H           GN+FLS + V  N A   VQ L E
Sbjct: 974  VQNLGCYVVSGLIISALLPAVAH----------GGNYFLSLSQVITNNASCIVQNLTE 1021

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>RPOC_BACSK (Q5WLR9) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
            beta' subunit) (Transcriptase beta' chain) (RNA
            polymerase beta' subunit)
          Length = 1206

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = +2

Query: 134  RRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTL 304
            + G E  E L+ R +     +T++      VLV   + +  + AK +V AGV+SVT+
Sbjct: 830  KEGTETIEGLYDRLVGRVAFKTVRHPETDEVLVRRGELMNEDTAKQIVDAGVESVTI 886

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>RPOC_LISMO (Q8YA96) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
            beta' subunit) (Transcriptase beta' chain) (RNA
            polymerase beta' subunit)
          Length = 1201

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = +2

Query: 134  RRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTL 304
            R G EI E L  R    Y R+T++      V+      +   IA  +V AG++ VT+
Sbjct: 830  REGTEIIEPLEERLEGRYSRKTIRHPETKEVIARENDLITEAIATQIVDAGIEEVTI 886

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>RPOC_LISMF (Q724E9) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
            beta' subunit) (Transcriptase beta' chain) (RNA
            polymerase beta' subunit)
          Length = 1201

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = +2

Query: 134  RRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTL 304
            R G EI E L  R    Y R+T++      V+      +   IA  +V AG++ VT+
Sbjct: 830  REGTEIIEPLEERLEGRYSRKTIRHPETKEVIARENDLITEAIATQIVDAGIEEVTI 886

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>RPOC_LISIN (P77879) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
            beta' subunit) (Transcriptase beta' chain) (RNA
            polymerase beta' subunit)
          Length = 1201

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = +2

Query: 134  RRGNEIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTL 304
            R G EI E L  R    Y R+T++      V+      +   IA  +V AG++ VT+
Sbjct: 830  REGTEIIEPLEERLEGRYSRKTIRHPETKEVIARENDLITEAIATQIVDAGIEEVTI 886

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>RPOB_PINTH (P41607) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP)|
            (Plastid-encoded RNA polymerase beta subunit) (RNA
            polymerase beta subunit)
          Length = 1075

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +2

Query: 116  GDAAMARRGNEIDEDLHSRQLAVYGRETMKRLFGSN 223
            G A M++  +++DE +H+R    Y R T + L G +
Sbjct: 948  GKAYMSKLSHQVDEKIHARSSGPYARVTQQPLRGKS 983

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>RPOB_PINKO (Q85X54) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP)|
            (Plastid-encoded RNA polymerase beta subunit) (RNA
            polymerase beta subunit)
          Length = 1075

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +2

Query: 116  GDAAMARRGNEIDEDLHSRQLAVYGRETMKRLFGSN 223
            G A M++  +++DE +H+R    Y R T + L G +
Sbjct: 948  GKAYMSKLSHQVDEKIHARSSGPYARVTQQPLRGKS 983

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>SEL10_CAEEL (Q93794) F-box/WD-repeat protein sel-10 (Suppressor/enhancer of|
           lin-12) (Sel-10 protein)
          Length = 587

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
 Frame = +2

Query: 122 AAMARRGNEI---DEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVK 292
           + M  RGN +   + D H R   ++    +  L G    ++ LQ  G    +N+V     
Sbjct: 467 SGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFG----RNMV----- 517

Query: 293 SVTLHDDGNVELWDL 337
             T  DDG V+LWD+
Sbjct: 518 -ATSSDDGTVKLWDI 531

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>KLF9_HUMAN (Q13886) Krueppel-like factor 9 (Transcription factor BTEB1) (Basic|
           transcription element-binding protein 1) (BTE-binding
           protein 1) (GC box-binding protein 1)
          Length = 244

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = +1

Query: 160 PAQSPARRLWPRDHEAPLRLQRPRLWTSGSRCRDRKEPCP-RGC 288
           P+ SP  R  P    +PL L  P +   G    +++  CP  GC
Sbjct: 107 PSHSPEERQDPGSAPSPLSLLHPGVAAKGKHASEKRHKCPYSGC 150

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>ATG7_SCHPO (O43069) Autophagy-related protein 7 (Autophagy-related|
           E1-like-activating enzyme atg7)
          Length = 649

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
 Frame = +2

Query: 200 MKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSGNFFLSENDVGQN 379
           + R+  S  L+ G   LG  +A+NL+  GV+ VT  D   V   +       +  D  + 
Sbjct: 330 LDRIQNSKCLLLGAGTLGCGVARNLLSWGVRHVTFVDYSTVSYSNPVRQSLFTFEDCKRK 389

Query: 380 --RAQACVQKLQEL 415
             +A+   Q+L+E+
Sbjct: 390 LPKAECAAQRLKEI 403

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>ATG7_CRYNE (Q5KC57) Autophagy-related protein 7 (Autophagy-related|
           E1-like-activating enzyme ATG7)
          Length = 675

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
 Frame = +2

Query: 200 MKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSGNFFLSENDV--- 370
           + ++ G+  L+ G   LG  +A+ L+  GV+++TL D   V   +       + +D    
Sbjct: 334 LDKISGTRCLLLGAGTLGCYVARILMGWGVRNITLVDSSTVSYSNPVRQPLFTFSDCLNG 393

Query: 371 GQNRAQACVQKLQEL 415
           G  +A    +KLQE+
Sbjct: 394 GLPKAPTAAKKLQEI 408

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>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1|
          Length = 917

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 27/90 (30%), Positives = 31/90 (34%)
 Frame = +1

Query: 10  RRTVPRLLPSPTRQANPRFRGGRTRWIXXXXXXXXXXXXXXTEGERDRRGPAQSPARRLW 189
           RRT PR +P P R    R    R R                +   R R  P + P R   
Sbjct: 325 RRTPPRRMPPPPRHRRSRSPVRRRR----RSSASLSGSSSSSSSSRSRSPPKKPPKRT-- 378

Query: 190 PRDHEAPLRLQRPRLWTSGSRCRDRKEPCP 279
                +P R  R RL  S S  R R  P P
Sbjct: 379 ----SSPPRKTR-RLSPSASPPRRRHRPSP 403

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>POLR_ELV (P35928) RNA replicase polyprotein (EC 2.7.7.48)|
          Length = 1748

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
 Frame = -2

Query: 372 PTSFS---ERKKLPDKSHSSTLPSSCKVTDLTPARTRFFAISAPRP*SPETRTLEPKRRF 202
           P SF+   +R+ L   SHSS LPSSC     +P+       +AP P  P  +   P    
Sbjct: 540 PESFTLGWKRRPLLLDSHSSFLPSSCLQPPASPS-----IAAAPHPLPPAQKPPRPPTTV 594

Query: 201 MVSRP 187
              +P
Sbjct: 595 PTPKP 599

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>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1|
           (Ser/Arg-related nuclear matrix protein) (SR-related
           nuclear matrix protein of 160 kDa) (SRm160)
          Length = 904

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 27/90 (30%), Positives = 31/90 (34%)
 Frame = +1

Query: 10  RRTVPRLLPSPTRQANPRFRGGRTRWIXXXXXXXXXXXXXXTEGERDRRGPAQSPARRLW 189
           RRT PR +P P R    R    R R                +   R R  P + P R   
Sbjct: 325 RRTPPRRMPPPPRHRRSRSPVRRRR----RSSASLSGSSSSSSSSRSRSPPKKPPKRT-- 378

Query: 190 PRDHEAPLRLQRPRLWTSGSRCRDRKEPCP 279
                +P R  R RL  S S  R R  P P
Sbjct: 379 ----SSPPRKTR-RLSPSASPPRRRHRPSP 403


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,144,324
Number of Sequences: 219361
Number of extensions: 1230634
Number of successful extensions: 4756
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 4577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4752
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result