ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl45d08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M55604.1|WHTUBA1 T.aestivum ubiquitin activating enzyme E1 (UBA1) gene, complete cds Length = 3586 Score = 585 bits (295), Expect = e-164 Identities = 328/339 (96%) Strand = Plus / Plus Query: 107 agggaggaaggagacgcagccatggcacggagggggaacgagatcgacgaggacctgcac 166 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 267 agggaggaaggagacgcagccatggcagggagggggaacgagatcgacgaggacctgcac 326 Query: 167 agtcgccagctcgccgtctatggccgcgagaccatgaagcgcctcttcggctccaacgtc 226 || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 327 agccgccagctcgccgtctatgggcgcgagaccatgaagcgcctcttcggctccaacgtc 386 Query: 227 ctcgtctctggacttcagggtctcggtgccgagatcgcaaagaaccttgtcctcgcgggt 286 |||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 387 ctcgtctctggactccagggtctcggtgctgagatcgcaaagaaccttgtccttgcgggt 446 Query: 287 gtcaagtctgtaaccttgcacgatgatggtaatgtggagctgtgggacttatcaggcaac 346 |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||| Sbjct: 447 gtcaagtctgtaaccttgcatgatgatggtaacgtggagctgtgggacttatcaagcaac 506 Query: 347 ttcttcctctcggagaatgatgttgggcaaaaccgagctcaagcttgtgtacagaagcta 406 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 507 ttcttcctctcggagaatgatgttgggcaaaaccgtgctcaagcttgtgtacagaagcta 566 Query: 407 caagagcttaacaatgctgtcctcgtctctgccttaacc 445 |||||||| |||||||||||||||||||||||||||||| Sbjct: 567 caagagctgaacaatgctgtcctcgtctctgccttaacc 605 Score = 113 bits (57), Expect = 5e-22 Identities = 89/101 (88%), Gaps = 9/101 (8%) Strand = Plus / Plus Query: 15 gaccgtccctcgcctgcttccttccccgacgcgacaggcgaatccaaggtttcgcggcgg 74 ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 6 gaccgtcgctcgcctgcttccttcaccgacgcgacaggcgaatccaaggtttcgcggcgg 65 Query: 75 tcg---------cacgcgctggatctgacgcggcagctccc 106 | | ||||||||||||||||||||||||||||| Sbjct: 66 ttgcggccctagcacgcgctggatctgacgcggcagctccc 106
>gb|M90663.1|WHTE1A Wheat ubiquitin activating enzyme (E1) mRNA, complete cds Length = 3695 Score = 573 bits (289), Expect = e-160 Identities = 328/341 (96%) Strand = Plus / Plus Query: 105 ccagggaggaaggagacgcagccatggcacggagggggaacgagatcgacgaggacctgc 164 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 360 ccagggaggaaggagacgcagccatggctgggagggggaacgagatcgacgaggacctgc 419 Query: 165 acagtcgccagctcgccgtctatggccgcgagaccatgaagcgcctcttcggctccaacg 224 |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 420 acagccgccagctcgccgtctatggccgcgagaccatgaagccgctcttcggctccaacg 479 Query: 225 tcctcgtctctggacttcagggtctcggtgccgagatcgcaaagaaccttgtcctcgcgg 284 |||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||| Sbjct: 480 tcctcgtctctggactccagggtctcggtgctgagatcgcaaagaaccttgtccttgcgg 539 Query: 285 gtgtcaagtctgtaaccttgcacgatgatggtaatgtggagctgtgggacttatcaggca 344 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct: 540 gtgtcaagtctgtaaccttgcatgatgatggtaatgtggagctgtgggacttatcaagca 599 Query: 345 acttcttcctctcggagaatgatgttgggcaaaaccgagctcaagcttgtgtacagaagc 404 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 600 acttcttcctctcggagaatgatgttgggcaaaaccgtgctcaagcttgtgtacagaagc 659 Query: 405 tacaagagcttaacaatgctgtcctcgtctctgccttaacc 445 |||||||||| ||||| |||||||||||||||||||||||| Sbjct: 660 tacaagagctgaacaacgctgtcctcgtctctgccttaacc 700 Score = 77.8 bits (39), Expect = 3e-11 Identities = 49/51 (96%), Gaps = 1/51 (1%) Strand = Plus / Plus Query: 15 gaccgtccctcgcctgctt-ccttccccgacgcgacaggcgaatccaaggt 64 ||||||| ||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 26 gaccgtcgctcgcctgctttccttccccgacgcgacaggcgaatccaaggt 76 Score = 44.1 bits (22), Expect = 0.38 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 77 gcacgcgctggatctgacgcggcagctccc 106 |||||||||||||||||||| ||||||||| Sbjct: 174 gcacgcgctggatctgacgc-gcagctccc 202
>dbj|AK111781.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083B12, full insert sequence Length = 3724 Score = 345 bits (174), Expect = 8e-92 Identities = 255/282 (90%) Strand = Plus / Plus Query: 145 cgagatcgacgaggacctgcacagtcgccagctcgccgtctatggccgcgagaccatgaa 204 ||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 437 cgagatcgatgaggaccttcacagccgccagctcgccgtctatggccgcgagaccatgaa 496 Query: 205 gcgcctcttcggctccaacgtcctcgtctctggacttcagggtctcggtgccgagatcgc 264 ||||||||||| ||||||||||||||||||||| || | || ||||| ||||||||||| Sbjct: 497 gcgcctcttcgcctccaacgtcctcgtctctggcctcaacggcctcggcgccgagatcgc 556 Query: 265 aaagaaccttgtcctcgcgggtgtcaagtctgtaaccttgcacgatgatggtaatgtgga 324 |||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 557 caagaaccttgtccttgcgggtgtcaagtccgtaaccttgcacgatgatgacaatgtgga 616 Query: 325 gctgtgggacttatcaggcaacttcttcctctcggagaatgatgttgggcaaaaccgagc 384 ||| |||||||||||| |||||||||||||| | ||||| |||||||| |||||||| || Sbjct: 617 gctatgggacttatcaagcaacttcttcctcacagagaaggatgttggtcaaaaccgtgc 676 Query: 385 tcaagcttgtgtacagaagctacaagagcttaacaatgctgt 426 |||| ||||||| ||||||||||| ||||| || |||||||| Sbjct: 677 tcaaacttgtgttcagaagctacaggagctcaataatgctgt 718 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 ctggatctgacgcggcagctc 104 ||||||||||||||||||||| Sbjct: 225 ctggatctgacgcggcagctc 245
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 192 bits (97), Expect = 7e-46 Identities = 145/161 (90%) Strand = Plus / Minus Query: 266 aagaaccttgtcctcgcgggtgtcaagtctgtaaccttgcacgatgatggtaatgtggag 325 |||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 316315 aagaaccttgtccttgcgggtgtcaagtccgtaaccttgcacgatgatgacaatgtggag 316256 Query: 326 ctgtgggacttatcaggcaacttcttcctctcggagaatgatgttgggcaaaaccgagct 385 || |||||||||||| |||||||||||||| | ||||| |||||||| |||||||| ||| Sbjct: 316255 ctatgggacttatcaagcaacttcttcctcacagagaaggatgttggtcaaaaccgtgct 316196 Query: 386 caagcttgtgtacagaagctacaagagcttaacaatgctgt 426 ||| ||||||| ||||||||||| ||||| || |||||||| Sbjct: 316195 caaacttgtgttcagaagctacaggagctcaataatgctgt 316155 Score = 157 bits (79), Expect = 4e-35 Identities = 109/119 (91%) Strand = Plus / Minus Query: 145 cgagatcgacgaggacctgcacagtcgccagctcgccgtctatggccgcgagaccatgaa 204 ||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 317138 cgagatcgatgaggaccttcacagccgccagctcgccgtctatggccgcgagaccatgaa 317079 Query: 205 gcgcctcttcggctccaacgtcctcgtctctggacttcagggtctcggtgccgagatcg 263 ||||||||||| ||||||||||||||||||||| || | || ||||| |||||||||| Sbjct: 317078 gcgcctcttcgcctccaacgtcctcgtctctggcctcaacggcctcggcgccgagatcg 317020 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 ctggatctgacgcggcagctc 104 ||||||||||||||||||||| Sbjct: 317350 ctggatctgacgcggcagctc 317330
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 192 bits (97), Expect = 7e-46 Identities = 145/161 (90%) Strand = Plus / Minus Query: 266 aagaaccttgtcctcgcgggtgtcaagtctgtaaccttgcacgatgatggtaatgtggag 325 |||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 316315 aagaaccttgtccttgcgggtgtcaagtccgtaaccttgcacgatgatgacaatgtggag 316256 Query: 326 ctgtgggacttatcaggcaacttcttcctctcggagaatgatgttgggcaaaaccgagct 385 || |||||||||||| |||||||||||||| | ||||| |||||||| |||||||| ||| Sbjct: 316255 ctatgggacttatcaagcaacttcttcctcacagagaaggatgttggtcaaaaccgtgct 316196 Query: 386 caagcttgtgtacagaagctacaagagcttaacaatgctgt 426 ||| ||||||| ||||||||||| ||||| || |||||||| Sbjct: 316195 caaacttgtgttcagaagctacaggagctcaataatgctgt 316155 Score = 157 bits (79), Expect = 4e-35 Identities = 109/119 (91%) Strand = Plus / Minus Query: 145 cgagatcgacgaggacctgcacagtcgccagctcgccgtctatggccgcgagaccatgaa 204 ||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 317138 cgagatcgatgaggaccttcacagccgccagctcgccgtctatggccgcgagaccatgaa 317079 Query: 205 gcgcctcttcggctccaacgtcctcgtctctggacttcagggtctcggtgccgagatcg 263 ||||||||||| ||||||||||||||||||||| || | || ||||| |||||||||| Sbjct: 317078 gcgcctcttcgcctccaacgtcctcgtctctggcctcaacggcctcggcgccgagatcg 317020 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 ctggatctgacgcggcagctc 104 ||||||||||||||||||||| Sbjct: 317350 ctggatctgacgcggcagctc 317330
>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152222 Score = 192 bits (97), Expect = 7e-46 Identities = 145/161 (90%) Strand = Plus / Minus Query: 266 aagaaccttgtcctcgcgggtgtcaagtctgtaaccttgcacgatgatggtaatgtggag 325 |||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 49366 aagaaccttgtccttgcgggtgtcaagtccgtaaccttgcacgatgatgacaatgtggag 49307 Query: 326 ctgtgggacttatcaggcaacttcttcctctcggagaatgatgttgggcaaaaccgagct 385 || |||||||||||| |||||||||||||| | ||||| |||||||| |||||||| ||| Sbjct: 49306 ctatgggacttatcaagcaacttcttcctcacagagaaggatgttggtcaaaaccgtgct 49247 Query: 386 caagcttgtgtacagaagctacaagagcttaacaatgctgt 426 ||| ||||||| ||||||||||| ||||| || |||||||| Sbjct: 49246 caaacttgtgttcagaagctacaggagctcaataatgctgt 49206 Score = 157 bits (79), Expect = 4e-35 Identities = 109/119 (91%) Strand = Plus / Minus Query: 145 cgagatcgacgaggacctgcacagtcgccagctcgccgtctatggccgcgagaccatgaa 204 ||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 50189 cgagatcgatgaggaccttcacagccgccagctcgccgtctatggccgcgagaccatgaa 50130 Query: 205 gcgcctcttcggctccaacgtcctcgtctctggacttcagggtctcggtgccgagatcg 263 ||||||||||| ||||||||||||||||||||| || | || ||||| |||||||||| Sbjct: 50129 gcgcctcttcgcctccaacgtcctcgtctctggcctcaacggcctcggcgccgagatcg 50071 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 ctggatctgacgcggcagctc 104 ||||||||||||||||||||| Sbjct: 50401 ctggatctgacgcggcagctc 50381
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 184 bits (93), Expect = 2e-43 Identities = 144/161 (89%) Strand = Plus / Minus Query: 266 aagaaccttgtcctcgcgggtgtcaagtctgtaaccttgcacgatgatggtaatgtggag 325 |||||||||||||| |||||||||||||| |||| |||||||||||||| ||||||||| Sbjct: 299350 aagaaccttgtccttgcgggtgtcaagtccgtaaacttgcacgatgatgacaatgtggag 299291 Query: 326 ctgtgggacttatcaggcaacttcttcctctcggagaatgatgttgggcaaaaccgagct 385 || |||||||||||| |||||||||||||| | ||||| |||||||| |||||||| ||| Sbjct: 299290 ctatgggacttatcaagcaacttcttcctcacagagaaggatgttggtcaaaaccgtgct 299231 Query: 386 caagcttgtgtacagaagctacaagagcttaacaatgctgt 426 ||| ||||||| ||||||||||| ||||| || |||||||| Sbjct: 299230 caaacttgtgttcagaagctacaggagctcaataatgctgt 299190 Score = 157 bits (79), Expect = 4e-35 Identities = 109/119 (91%) Strand = Plus / Minus Query: 145 cgagatcgacgaggacctgcacagtcgccagctcgccgtctatggccgcgagaccatgaa 204 ||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 300173 cgagatcgatgaggacctccacagccgccagctcgccgtctatggccgcgagaccatgaa 300114 Query: 205 gcgcctcttcggctccaacgtcctcgtctctggacttcagggtctcggtgccgagatcg 263 ||||||||||| ||||||||||||||||||||| || | || ||||| |||||||||| Sbjct: 300113 gcgcctcttcgcctccaacgtcctcgtctctggcctcaacggcctcggcgccgagatcg 300055 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 ctggatctgacgcggcagctc 104 ||||||||||||||||||||| Sbjct: 300382 ctggatctgacgcggcagctc 300362
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 184 bits (93), Expect = 2e-43 Identities = 144/161 (89%) Strand = Plus / Minus Query: 266 aagaaccttgtcctcgcgggtgtcaagtctgtaaccttgcacgatgatggtaatgtggag 325 |||||||||||||| |||||||||||||| |||| |||||||||||||| ||||||||| Sbjct: 299350 aagaaccttgtccttgcgggtgtcaagtccgtaaacttgcacgatgatgacaatgtggag 299291 Query: 326 ctgtgggacttatcaggcaacttcttcctctcggagaatgatgttgggcaaaaccgagct 385 || |||||||||||| |||||||||||||| | ||||| |||||||| |||||||| ||| Sbjct: 299290 ctatgggacttatcaagcaacttcttcctcacagagaaggatgttggtcaaaaccgtgct 299231 Query: 386 caagcttgtgtacagaagctacaagagcttaacaatgctgt 426 ||| ||||||| ||||||||||| ||||| || |||||||| Sbjct: 299230 caaacttgtgttcagaagctacaggagctcaataatgctgt 299190 Score = 157 bits (79), Expect = 4e-35 Identities = 109/119 (91%) Strand = Plus / Minus Query: 145 cgagatcgacgaggacctgcacagtcgccagctcgccgtctatggccgcgagaccatgaa 204 ||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 300173 cgagatcgatgaggacctccacagccgccagctcgccgtctatggccgcgagaccatgaa 300114 Query: 205 gcgcctcttcggctccaacgtcctcgtctctggacttcagggtctcggtgccgagatcg 263 ||||||||||| ||||||||||||||||||||| || | || ||||| |||||||||| Sbjct: 300113 gcgcctcttcgcctccaacgtcctcgtctctggcctcaacggcctcggcgccgagatcg 300055 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 ctggatctgacgcggcagctc 104 ||||||||||||||||||||| Sbjct: 300382 ctggatctgacgcggcagctc 300362
>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160673 Score = 184 bits (93), Expect = 2e-43 Identities = 144/161 (89%) Strand = Plus / Plus Query: 266 aagaaccttgtcctcgcgggtgtcaagtctgtaaccttgcacgatgatggtaatgtggag 325 |||||||||||||| |||||||||||||| |||| |||||||||||||| ||||||||| Sbjct: 5643 aagaaccttgtccttgcgggtgtcaagtccgtaaacttgcacgatgatgacaatgtggag 5702 Query: 326 ctgtgggacttatcaggcaacttcttcctctcggagaatgatgttgggcaaaaccgagct 385 || |||||||||||| |||||||||||||| | ||||| |||||||| |||||||| ||| Sbjct: 5703 ctatgggacttatcaagcaacttcttcctcacagagaaggatgttggtcaaaaccgtgct 5762 Query: 386 caagcttgtgtacagaagctacaagagcttaacaatgctgt 426 ||| ||||||| ||||||||||| ||||| || |||||||| Sbjct: 5763 caaacttgtgttcagaagctacaggagctcaataatgctgt 5803 Score = 157 bits (79), Expect = 4e-35 Identities = 109/119 (91%) Strand = Plus / Plus Query: 145 cgagatcgacgaggacctgcacagtcgccagctcgccgtctatggccgcgagaccatgaa 204 ||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 4820 cgagatcgatgaggacctccacagccgccagctcgccgtctatggccgcgagaccatgaa 4879 Query: 205 gcgcctcttcggctccaacgtcctcgtctctggacttcagggtctcggtgccgagatcg 263 ||||||||||| ||||||||||||||||||||| || | || ||||| |||||||||| Sbjct: 4880 gcgcctcttcgcctccaacgtcctcgtctctggcctcaacggcctcggcgccgagatcg 4938 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 ctggatctgacgcggcagctc 104 ||||||||||||||||||||| Sbjct: 4611 ctggatctgacgcggcagctc 4631
>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 164143 Score = 184 bits (93), Expect = 2e-43 Identities = 144/161 (89%) Strand = Plus / Minus Query: 266 aagaaccttgtcctcgcgggtgtcaagtctgtaaccttgcacgatgatggtaatgtggag 325 |||||||||||||| |||||||||||||| |||| |||||||||||||| ||||||||| Sbjct: 6668 aagaaccttgtccttgcgggtgtcaagtccgtaaacttgcacgatgatgacaatgtggag 6609 Query: 326 ctgtgggacttatcaggcaacttcttcctctcggagaatgatgttgggcaaaaccgagct 385 || |||||||||||| |||||||||||||| | ||||| |||||||| |||||||| ||| Sbjct: 6608 ctatgggacttatcaagcaacttcttcctcacagagaaggatgttggtcaaaaccgtgct 6549 Query: 386 caagcttgtgtacagaagctacaagagcttaacaatgctgt 426 ||| ||||||| ||||||||||| ||||| || |||||||| Sbjct: 6548 caaacttgtgttcagaagctacaggagctcaataatgctgt 6508 Score = 157 bits (79), Expect = 4e-35 Identities = 109/119 (91%) Strand = Plus / Minus Query: 145 cgagatcgacgaggacctgcacagtcgccagctcgccgtctatggccgcgagaccatgaa 204 ||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 7491 cgagatcgatgaggacctccacagccgccagctcgccgtctatggccgcgagaccatgaa 7432 Query: 205 gcgcctcttcggctccaacgtcctcgtctctggacttcagggtctcggtgccgagatcg 263 ||||||||||| ||||||||||||||||||||| || | || ||||| |||||||||| Sbjct: 7431 gcgcctcttcgcctccaacgtcctcgtctctggcctcaacggcctcggcgccgagatcg 7373 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 ctggatctgacgcggcagctc 104 ||||||||||||||||||||| Sbjct: 7700 ctggatctgacgcggcagctc 7680
>ref|NM_128566.3| Arabidopsis thaliana ATUBA1; ubiquitin activating enzyme AT2G30110 (ATUBA1) mRNA, complete cds Length = 3626 Score = 107 bits (54), Expect = 3e-20 Identities = 213/266 (80%) Strand = Plus / Plus Query: 161 ctgcacagtcgccagctcgccgtctatggccgcgagaccatgaagcgcctcttcggctcc 220 ||||||||||||||||||||||||||||| || ||||| |||| ||| ||||| | ||| Sbjct: 352 ctgcacagtcgccagctcgccgtctatggtcgtgagactatgaggcgtctctttgcttcc 411 Query: 221 aacgtcctcgtctctggacttcagggtctcggtgccgagatcgcaaagaaccttgtcctc 280 || || ||| |||| || | || ||||| ||||||||||| || ||||| ||| | || Sbjct: 412 aatgttctcatctcggggatgcacggtcttggtgccgagattgccaagaatcttatactt 471 Query: 281 gcgggtgtcaagtctgtaaccttgcacgatgatggtaatgtggagctgtgggacttatca 340 || ||||| |||||||| |||||||| ||||| | ||| ||||| |||||||||||| Sbjct: 472 gctggtgtgaagtctgtgaccttgcatgatgaaagagttgtagagctatgggacttatca 531 Query: 341 ggcaacttcttcctctcggagaatgatgttgggcaaaaccgagctcaagcttgtgtacag 400 ||||||| | |||||||| |||||||||| | || |||| | |||| ||| ||| Sbjct: 532 agcaactttgttttctcggaggatgatgttggcaagaatagagcagatgcttctgttcag 591 Query: 401 aagctacaagagcttaacaatgctgt 426 ||| |||| || |||||||||||||| Sbjct: 592 aagttacaggatcttaacaatgctgt 617
>gb|AY090248.1| Arabidopsis thaliana At2g30110/T27E13.15 mRNA, complete cds Length = 3561 Score = 107 bits (54), Expect = 3e-20 Identities = 213/266 (80%) Strand = Plus / Plus Query: 161 ctgcacagtcgccagctcgccgtctatggccgcgagaccatgaagcgcctcttcggctcc 220 ||||||||||||||||||||||||||||| || ||||| |||| ||| ||||| | ||| Sbjct: 313 ctgcacagtcgccagctcgccgtctatggtcgtgagactatgaggcgtctctttgcttcc 372 Query: 221 aacgtcctcgtctctggacttcagggtctcggtgccgagatcgcaaagaaccttgtcctc 280 || || ||| |||| || | || ||||| ||||||||||| || ||||| ||| | || Sbjct: 373 aatgttctcatctcggggatgcacggtcttggtgccgagattgccaagaatcttatactt 432 Query: 281 gcgggtgtcaagtctgtaaccttgcacgatgatggtaatgtggagctgtgggacttatca 340 || ||||| |||||||| |||||||| ||||| | ||| ||||| |||||||||||| Sbjct: 433 gctggtgtgaagtctgtgaccttgcatgatgaaagagttgtagagctatgggacttatca 492 Query: 341 ggcaacttcttcctctcggagaatgatgttgggcaaaaccgagctcaagcttgtgtacag 400 ||||||| | |||||||| |||||||||| | || |||| | |||| ||| ||| Sbjct: 493 agcaactttgttttctcggaggatgatgttggcaagaatagagcagatgcttctgttcag 552 Query: 401 aagctacaagagcttaacaatgctgt 426 ||| |||| || |||||||||||||| Sbjct: 553 aagttacaggatcttaacaatgctgt 578
>gb|BT006363.1| Arabidopsis thaliana At2g30110/T27E13.15 gene, complete cds Length = 3243 Score = 107 bits (54), Expect = 3e-20 Identities = 213/266 (80%) Strand = Plus / Plus Query: 161 ctgcacagtcgccagctcgccgtctatggccgcgagaccatgaagcgcctcttcggctcc 220 ||||||||||||||||||||||||||||| || ||||| |||| ||| ||||| | ||| Sbjct: 229 ctgcacagtcgccagctcgccgtctatggtcgtgagactatgaggcgtctctttgcttcc 288 Query: 221 aacgtcctcgtctctggacttcagggtctcggtgccgagatcgcaaagaaccttgtcctc 280 || || ||| |||| || | || ||||| ||||||||||| || ||||| ||| | || Sbjct: 289 aatgttctcatctcggggatgcacggtcttggtgccgagattgccaagaatcttatactt 348 Query: 281 gcgggtgtcaagtctgtaaccttgcacgatgatggtaatgtggagctgtgggacttatca 340 || ||||| |||||||| |||||||| ||||| | ||| ||||| |||||||||||| Sbjct: 349 gctggtgtgaagtctgtgaccttgcatgatgaaagagttgtagagctatgggacttatca 408 Query: 341 ggcaacttcttcctctcggagaatgatgttgggcaaaaccgagctcaagcttgtgtacag 400 ||||||| | |||||||| |||||||||| | || |||| | |||| ||| ||| Sbjct: 409 agcaactttgttttctcggaggatgatgttggcaagaatagagcagatgcttctgttcag 468 Query: 401 aagctacaagagcttaacaatgctgt 426 ||| |||| || |||||||||||||| Sbjct: 469 aagttacaggatcttaacaatgctgt 494
>gb|U80808.1|ATU80808 Arabidopsis thaliana ubiquitin activating enzyme (UBA1) gene, complete cds Length = 3346 Score = 107 bits (54), Expect = 3e-20 Identities = 213/266 (80%) Strand = Plus / Plus Query: 161 ctgcacagtcgccagctcgccgtctatggccgcgagaccatgaagcgcctcttcggctcc 220 ||||||||||||||||||||||||||||| || ||||| |||| ||| ||||| | ||| Sbjct: 326 ctgcacagtcgccagctcgccgtctatggtcgtgagactatgaggcgtctctttgcttcc 385 Query: 221 aacgtcctcgtctctggacttcagggtctcggtgccgagatcgcaaagaaccttgtcctc 280 || || ||| |||| || | || ||||| ||||||||||| || ||||| ||| | || Sbjct: 386 aatgttctcatctcggggatgcacggtcttggtgccgagattgccaagaatcttatactt 445 Query: 281 gcgggtgtcaagtctgtaaccttgcacgatgatggtaatgtggagctgtgggacttatca 340 || ||||| |||||||| |||||||| ||||| | ||| ||||| |||||||||||| Sbjct: 446 gctggtgtgaagtctgtgaccttgcatgatgaaagagttgtagagctatgggacttatca 505 Query: 341 ggcaacttcttcctctcggagaatgatgttgggcaaaaccgagctcaagcttgtgtacag 400 ||||||| | |||||||| |||||||||| | || |||| | |||| ||| ||| Sbjct: 506 agcaactttgttttctcggaggatgatgttggcaagaatagagcagatgcttctgttcag 565 Query: 401 aagctacaagagcttaacaatgctgt 426 ||| |||| || |||||||||||||| Sbjct: 566 aagttacaggatcttaacaatgctgt 591
>ref|NM_185567.2| Oryza sativa (japonica cultivar-group), mRNA Length = 3522 Score = 83.8 bits (42), Expect = 4e-13 Identities = 108/130 (83%) Strand = Plus / Plus Query: 146 gagatcgacgaggacctgcacagtcgccagctcgccgtctatggccgcgagaccatgaag 205 ||||| ||||||||||||||||| | |||||||||||||| || | ||||||||| Sbjct: 331 gagattgacgaggacctgcacagcaggcagctcgccgtctacgggagggagaccatgcgc 390 Query: 206 cgcctcttcggctccaacgtcctcgtctctggacttcagggtctcggtgccgagatcgca 265 |||||||||| |||| | |||||||||||||| || | || |||||||| ||||| || Sbjct: 391 cgcctcttcgcctcccatgtcctcgtctctggcctcaatggcctcggtgcagagattgcc 450 Query: 266 aagaaccttg 275 |||||||||| Sbjct: 451 aagaaccttg 460 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Plus Query: 401 aagctacaagagcttaacaatgctgtcctcgtctctgc 438 ||||| |||||||| ||||||||||| || |||||||| Sbjct: 586 aagctgcaagagctcaacaatgctgttcttgtctctgc 623
>dbj|AK074007.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076H04, full insert sequence Length = 3522 Score = 83.8 bits (42), Expect = 4e-13 Identities = 108/130 (83%) Strand = Plus / Plus Query: 146 gagatcgacgaggacctgcacagtcgccagctcgccgtctatggccgcgagaccatgaag 205 ||||| ||||||||||||||||| | |||||||||||||| || | ||||||||| Sbjct: 331 gagattgacgaggacctgcacagcaggcagctcgccgtctacgggagggagaccatgcgc 390 Query: 206 cgcctcttcggctccaacgtcctcgtctctggacttcagggtctcggtgccgagatcgca 265 |||||||||| |||| | |||||||||||||| || | || |||||||| ||||| || Sbjct: 391 cgcctcttcgcctcccatgtcctcgtctctggcctcaatggcctcggtgcagagattgcc 450 Query: 266 aagaaccttg 275 |||||||||| Sbjct: 451 aagaaccttg 460 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Plus Query: 401 aagctacaagagcttaacaatgctgtcctcgtctctgc 438 ||||| |||||||| ||||||||||| || |||||||| Sbjct: 586 aagctgcaagagctcaacaatgctgttcttgtctctgc 623
>dbj|AK120544.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129J22, full insert sequence Length = 3682 Score = 81.8 bits (41), Expect = 2e-12 Identities = 167/209 (79%) Strand = Plus / Plus Query: 146 gagatcgacgaggacctgcacagtcgccagctcgccgtctatggccgcgagaccatgaag 205 ||||||||||||||||||||||| | ||||||||||| || || | ||||| ||| | Sbjct: 370 gagatcgacgaggacctgcacagcaggcagctcgccgtgtacgggagggagacgatgcgg 429 Query: 206 cgcctcttcggctccaacgtcctcgtctctggacttcagggtctcggtgccgagatcgca 265 || ||||||| ||||||||||||||||| ||||| | || || || || ||||| || Sbjct: 430 cggctcttcgcgtccaacgtcctcgtctccggactgaacgggcttggggctgagattgcg 489 Query: 266 aagaaccttgtcctcgcgggtgtcaagtctgtaaccttgcacgatgatggtaatgtggag 325 ||||| |||| | |||||||| |||||| | ||| | || ||| || |||||||| Sbjct: 490 aagaatcttgctttagcgggtgttaagtctatcaccctacatgatatgggaaatgtggaa 549 Query: 326 ctgtgggacttatcaggcaacttcttcct 354 ||||||||||||||||||| |||||||| Sbjct: 550 atgtgggacttatcaggcaatttcttcct 578
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 146 gagatcgacgaggacctgcacagtcgccagctcgccgtctatggccgcgagaccatgaag 205 ||||| ||||||||||||||||| | |||||||||||||| || | ||||||||| Sbjct: 29425633 gagattgacgaggacctgcacagcaggcagctcgccgtctacgggagggagaccatgcgc 29425692 Query: 206 cgcctcttcggctccaacgtcctcgtctctgg 237 |||||||||| |||| | |||||||||||||| Sbjct: 29425693 cgcctcttcgcctcccatgtcctcgtctctgg 29425724 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Plus Query: 401 aagctacaagagcttaacaatgctgtcctcgtctctgc 438 ||||| |||||||| ||||||||||| || |||||||| Sbjct: 29426155 aagctgcaagagctcaacaatgctgttcttgtctctgc 29426192
>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0034A04 Length = 151263 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 146 gagatcgacgaggacctgcacagtcgccagctcgccgtctatggccgcgagaccatgaag 205 ||||| ||||||||||||||||| | |||||||||||||| || | ||||||||| Sbjct: 88555 gagattgacgaggacctgcacagcaggcagctcgccgtctacgggagggagaccatgcgc 88614 Query: 206 cgcctcttcggctccaacgtcctcgtctctgg 237 |||||||||| |||| | |||||||||||||| Sbjct: 88615 cgcctcttcgcctcccatgtcctcgtctctgg 88646 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Plus Query: 401 aagctacaagagcttaacaatgctgtcctcgtctctgc 438 ||||| |||||||| ||||||||||| || |||||||| Sbjct: 89077 aagctgcaagagctcaacaatgctgttcttgtctctgc 89114
>gb|M90664.1|WHTE1B Wheat ubiquitin activating enzyme (E1) mRNA, complete cds Length = 3588 Score = 71.9 bits (36), Expect = 2e-09 Identities = 123/152 (80%) Strand = Plus / Plus Query: 146 gagatcgacgaggacctgcacagtcgccagctcgccgtctatggccgcgagaccatgaag 205 ||||||||||||||||| ||||| | ||||||||||| || || | ||||||||| Sbjct: 318 gagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcgc 377 Query: 206 cgcctcttcggctccaacgtcctcgtctctggacttcagggtctcggtgccgagatcgca 265 |||||||||| |||| ||||||||||||| || || | || || || ||||| || ||| Sbjct: 378 cgcctcttcgcctccgacgtcctcgtctccgggctcaacgggcttggcgccgaaattgca 437 Query: 266 aagaaccttgtcctcgcgggtgtcaagtctgt 297 ||||| |||| ||| || || ||||||||||| Sbjct: 438 aagaatcttgcccttgctggagtcaagtctgt 469
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 146 gagatcgacgaggacctgcacagtcgccagctcgccgtctatggccgcgagaccatgaag 205 ||||||||||||||||||||||| | ||||||||||| || || | ||||| ||| | Sbjct: 10276947 gagatcgacgaggacctgcacagcaggcagctcgccgtgtacgggagggagacgatgcgg 10276888 Query: 206 cgcctcttcggctccaacgtcctcgtctctggact 240 || ||||||| ||||||||||||||||| ||||| Sbjct: 10276887 cggctcttcgcgtccaacgtcctcgtctccggact 10276853 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 aatgtggagctgtgggacttatcaggcaacttcttcct 354 |||||||| ||||||||||||||||||| |||||||| Sbjct: 10275675 aatgtggaaatgtgggacttatcaggcaatttcttcct 10275638
>gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0045E22, from chromosome 3, complete sequence Length = 160920 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 146 gagatcgacgaggacctgcacagtcgccagctcgccgtctatggccgcgagaccatgaag 205 ||||||||||||||||||||||| | ||||||||||| || || | ||||| ||| | Sbjct: 138360 gagatcgacgaggacctgcacagcaggcagctcgccgtgtacgggagggagacgatgcgg 138301 Query: 206 cgcctcttcggctccaacgtcctcgtctctggact 240 || ||||||| ||||||||||||||||| ||||| Sbjct: 138300 cggctcttcgcgtccaacgtcctcgtctccggact 138266 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 aatgtggagctgtgggacttatcaggcaacttcttcct 354 |||||||| ||||||||||||||||||| |||||||| Sbjct: 137088 aatgtggaaatgtgggacttatcaggcaatttcttcct 137051
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 146 gagatcgacgaggacctgcacagtcgccagctcgccgtctatggccgcgagaccatgaag 205 ||||||||||||||||||||||| | ||||||||||| || || | ||||| ||| | Sbjct: 10275048 gagatcgacgaggacctgcacagcaggcagctcgccgtgtacgggagggagacgatgcgg 10274989 Query: 206 cgcctcttcggctccaacgtcctcgtctctggact 240 || ||||||| ||||||||||||||||| ||||| Sbjct: 10274988 cggctcttcgcgtccaacgtcctcgtctccggact 10274954 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 317 aatgtggagctgtgggacttatcaggcaacttcttcct 354 |||||||| ||||||||||||||||||| |||||||| Sbjct: 10273776 aatgtggaaatgtgggacttatcaggcaatttcttcct 10273739
>gb|AC004165.3| Arabidopsis thaliana chromosome 2 clone T27E13 map m283, complete sequence Length = 83796 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 161 ctgcacagtcgccagctcgccgtctatggccgcgagaccatgaagcgcctctt 213 ||||||||||||||||||||||||||||| || ||||| |||| ||| ||||| Sbjct: 48499 ctgcacagtcgccagctcgccgtctatggtcgtgagactatgaggcgtctctt 48551 Score = 54.0 bits (27), Expect = 4e-04 Identities = 114/143 (79%) Strand = Plus / Plus Query: 284 ggtgtcaagtctgtaaccttgcacgatgatggtaatgtggagctgtgggacttatcaggc 343 ||||| |||||||| |||||||| ||||| | ||| ||||| |||||||||||| || Sbjct: 48984 ggtgtgaagtctgtgaccttgcatgatgaaagagttgtagagctatgggacttatcaagc 49043 Query: 344 aacttcttcctctcggagaatgatgttgggcaaaaccgagctcaagcttgtgtacagaag 403 ||||| | |||||||| |||||||||| | || |||| | |||| ||| |||||| Sbjct: 49044 aactttgttttctcggaggatgatgttggcaagaatagagcagatgcttctgttcagaag 49103 Query: 404 ctacaagagcttaacaatgctgt 426 |||| || |||||||||||||| Sbjct: 49104 ttacaggatcttaacaatgctgt 49126
>ref|XM_363483.1| Magnaporthe grisea 70-15 hypothetical protein (MG01409.4) partial mRNA Length = 3114 Score = 63.9 bits (32), Expect = 4e-07 Identities = 116/144 (80%) Strand = Plus / Plus Query: 145 cgagatcgacgaggacctgcacagtcgccagctcgccgtctatggccgcgagaccatgaa 204 ||||||||||||| ||| |||||||||||||| ||||| |||| |||| ||||||| Sbjct: 84 cgagatcgacgagtccctctacagtcgccagctctacgtcttgggccacgaggccatgaa 143 Query: 205 gcgcctcttcggctccaacgtcctcgtctctggacttcagggtctcggtgccgagatcgc 264 |||| | || |||||||||||| ||||||| || |||| || || | ||||||||| Sbjct: 144 gcgcatgggcgcgtccaacgtcctcatctctggcctcaagggccttggagtcgagatcgc 203 Query: 265 aaagaaccttgtcctcgcgggtgt 288 ||||| ||| |||||||||||| Sbjct: 204 caagaatgttgccctcgcgggtgt 227
>gb|DQ180310.1| Fragaria x ananassa clone PBCESTFXA5 SSR marker Length = 911 Score = 58.0 bits (29), Expect = 3e-05 Identities = 146/185 (78%) Strand = Plus / Plus Query: 149 atcgacgaggacctgcacagtcgccagctcgccgtctatggccgcgagaccatgaagcgc 208 ||||| ||||| |||||||| || ||||| |||||||||||||| ||||| |||| | | Sbjct: 720 atcgatgaggatctgcacagccggcagcttgccgtctatggccgggagactatgaggagg 779 Query: 209 ctcttcggctccaacgtcctcgtctctggacttcagggtctcggtgccgagatcgcaaag 268 ||||||| ||||| || || | || || | ||||| |||||||||||||| || ||| Sbjct: 780 ctcttcgcatccaatgttctgatttcagggatacagggcctcggtgccgagattgccaag 839 Query: 269 aaccttgtcctcgcgggtgtcaagtctgtaaccttgcacgatgatggtaatgtggagctg 328 || || | || || ||||| ||| |||| |||||||| ||||| || || || ||||| Sbjct: 840 aatctcattcttgctggtgtgaagactgtgaccttgcatgatgaagggaaagtagagctt 899 Query: 329 tggga 333 ||||| Sbjct: 900 tggga 904
>dbj|AB124880.1| Nicotiana tabacum mRNA for ubiquitin activating enzyme 2, complete cds Length = 3243 Score = 44.1 bits (22), Expect = 0.38 Identities = 61/74 (82%) Strand = Plus / Plus Query: 260 atcgcaaagaaccttgtcctcgcgggtgtcaagtctgtaaccttgcacgatgatggtaat 319 ||||||||||||||| | || |||||||| || || || || |||||||| || || ||| Sbjct: 328 atcgcaaagaaccttattcttgcgggtgtgaaatccgttactttgcacgacgaaggaaat 387 Query: 320 gtggagctgtggga 333 ||||| ||||||| Sbjct: 388 gtggaattgtggga 401
>dbj|AB124879.1| Nicotiana tabacum mRNA for ubiquitin activating enzyme 1, complete cds Length = 3243 Score = 44.1 bits (22), Expect = 0.38 Identities = 61/74 (82%) Strand = Plus / Plus Query: 260 atcgcaaagaaccttgtcctcgcgggtgtcaagtctgtaaccttgcacgatgatggtaat 319 ||||||||||| ||| | || |||||||| ||||| || || |||||||| || || ||| Sbjct: 328 atcgcaaagaatcttattcttgcgggtgtgaagtccgttactttgcacgacgaaggaaat 387 Query: 320 gtggagctgtggga 333 ||||| ||||||| Sbjct: 388 gtggaattgtggga 401
>emb|Z97206.1|HS359N14 Human DNA sequence from clone RP3-359N14 on chromosome 6q16.3-21 Contains a novel gene and a chromatin assembly factor 1 p60 subunit (CHAF1B) pseudogene, complete sequence Length = 136299 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 ggcagctcccagggaggaagg 117 ||||||||||||||||||||| Sbjct: 3059 ggcagctcccagggaggaagg 3039
>gb|AC091940.3| Homo sapiens chromosome 5 clone RP11-331K21, complete sequence Length = 143702 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 104 cccagggaggaaggagacgcagcca 128 ||||||||||||||||| ||||||| Sbjct: 3449 cccagggaggaaggagaggcagcca 3473
>gb|AC011364.4| Homo sapiens chromosome 5 clone CTC-529P8, complete sequence Length = 122394 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 104 cccagggaggaaggagacgcagcca 128 ||||||||||||||||| ||||||| Sbjct: 103026 cccagggaggaaggagaggcagcca 103050
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 caaggtttcgcggcggtcgc 78 |||||||||||||||||||| Sbjct: 1950645 caaggtttcgcggcggtcgc 1950626
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 tcggtgccgagatcgcaaag 268 |||||||||||||||||||| Sbjct: 2802295 tcggtgccgagatcgcaaag 2802314
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 caaggtttcgcggcggtcgc 78 |||||||||||||||||||| Sbjct: 1480472 caaggtttcgcggcggtcgc 1480491
>ref|XM_658636.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6124.2), mRNA Length = 1020 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 aagaaccttgtcctcgcggg 285 |||||||||||||||||||| Sbjct: 754 aagaaccttgtcctcgcggg 773
>ref|XM_757242.1| Ustilago maydis 521 hypothetical protein (UM06188.1) partial mRNA Length = 3072 Score = 40.1 bits (20), Expect = 6.0 Identities = 44/52 (84%) Strand = Plus / Plus Query: 220 caacgtcctcgtctctggacttcagggtctcggtgccgagatcgcaaagaac 271 ||||||||||||| || |||| ||||||||||| || |||||||||||| Sbjct: 117 caacgtcctcgtcgtcggtcttcgcggtctcggtgctgaaatcgcaaagaac 168
>emb|CR936259.1| Natronomonas pharaonis DSM 2160 plasmid PL23 complete genome Length = 23486 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 ggaacgagatcgacgaggac 160 |||||||||||||||||||| Sbjct: 17823 ggaacgagatcgacgaggac 17804
>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13 Length = 346051 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 tcggtgccgagatcgcaaag 268 |||||||||||||||||||| Sbjct: 33771 tcggtgccgagatcgcaaag 33790
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 caaggtttcgcggcggtcgc 78 |||||||||||||||||||| Sbjct: 1367581 caaggtttcgcggcggtcgc 1367600
>emb|BX248342.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 9/14 Length = 306550 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 tcggtgccgagatcgcaaag 268 |||||||||||||||||||| Sbjct: 262604 tcggtgccgagatcgcaaag 262623
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 gcgagaccatgaagcgcctc 211 |||||||||||||||||||| Sbjct: 451026 gcgagaccatgaagcgcctc 451045
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 gacggaccgtccctcgcctg 30 |||||||||||||||||||| Sbjct: 86184 gacggaccgtccctcgcctg 86203
>dbj|AK110521.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-167-H03, full insert sequence Length = 1419 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 245 ggtctcggtgccgagatcgcaaagaacc 272 |||||||||||| |||||| |||||||| Sbjct: 592 ggtctcggtgccaagatcggaaagaacc 619
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 ggaacgagatcgacgaggac 160 |||||||||||||||||||| Sbjct: 1596793 ggaacgagatcgacgaggac 1596774
>gb|U16723.1|DVU16723 Desulfovibrio vulgaris dissimilatory sulfite reductase alpha (dsvA), dissimilatory sulfite reductase beta (dsvB) and dsvD genes, complete cds Length = 3119 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 gcgagaccatgaagcgcctc 211 |||||||||||||||||||| Sbjct: 1373 gcgagaccatgaagcgcctc 1392 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,939,015 Number of Sequences: 3902068 Number of extensions: 2939015 Number of successful extensions: 52695 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 44 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 52217 Number of HSP's gapped (non-prelim): 468 length of query: 445 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 423 effective length of database: 17,147,199,772 effective search space: 7253265503556 effective search space used: 7253265503556 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
