>MUCDL_HUMAN (Q9HBB8) Mucin and cadherin-like protein precursor|
           (Mu-protocadherin)
          Length = 845

 Score = 32.7 bits (73), Expect = 0.47
 Identities = 18/55 (32%), Positives = 23/55 (41%)
 Frame = -1

Query: 254 TTTSQGSGPDARPSNGGALRPDMAAEKPCGRGGGRSDRVEERVNPRGDEVSGRKP 90
           +TTS G G    P +G  LRP   +  P G  G  +    +   P GD     KP
Sbjct: 492 STTSSGGGTGPHPPSGTTLRPP-TSSTPGGSPGAENSTSHQPATPGGDTAQTPKP 545

>TRXB_ASHGO (Q75CM8) Thioredoxin reductase (EC 1.8.1.9)|
          Length = 319

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 20/71 (28%), Positives = 30/71 (42%)
 Frame = -3

Query: 372 RAKLKSTCNFGTKSR*IQSEVCSVDIAIEPLKCVTIFDLDDDVPXXXXXXXXXXXXXAQA 193
           R K +S   FGT+   +   V  VD++  P K  T F+ D++                + 
Sbjct: 70  RMKAQSV-KFGTEV--VTETVAKVDLSARPFKLWTEFNEDEEPTTTDAIILATGASAKRL 126

Query: 192 GHGGRETLWER 160
           G  G ET W+R
Sbjct: 127 GLPGEETYWQR 137

>METW_YEAST (Q12198) Putative cystathionine gamma-synthase YLL058W (EC|
           2.5.1.48) (O-succinylhomoserine (thiol)-lyase)
          Length = 575

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
 Frame = +1

Query: 271 DTLKRFNGYVNGTHFTLNLS----ALRSKIASAFKFGPDADFI 387
           D+LK F G  NGT+FTL       A  S++    KFG D + I
Sbjct: 502 DSLKVFKGPSNGTNFTLACPYVHLAHHSELEEVSKFGADPNII 544

>CACB2_MOUSE (Q8CC27) Voltage-dependent L-type calcium channel beta-2 subunit|
           (CAB2) (Calcium channel, voltage-dependent, beta 2
           subunit)
          Length = 655

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = -1

Query: 281 LSVSPYLTLTTTSQGSGPDARPSNGGALRPDMAAEKPC 168
           L +SP  TL + SQGS  D RP          A E+PC
Sbjct: 482 LPLSP--TLASNSQGSQGDQRPDRSAPRSASQAEEEPC 517

>RS5_SYNPX (Q7U4I4) 30S ribosomal protein S5|
          Length = 215

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = -1

Query: 257 LTTTSQGSGPDARPSNGGALRPDMAAEKPCGRGGGRSDRVEERVNPRGD 111
           +T +S  S P+A P            ++   RGGGR +R + R   RGD
Sbjct: 1   MTDSSPQSNPNAVPGAADVPAAAEGQQQEQRRGGGRGERGDRRGGRRGD 49


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,054,652
Number of Sequences: 219361
Number of extensions: 840537
Number of successful extensions: 2744
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2744
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)