Clone Name | bastl45d06 |
---|---|
Clone Library Name | barley_pub |
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 221 bits (562), Expect = 9e-58 Identities = 112/115 (97%), Positives = 112/115 (97%) Frame = +3 Query: 111 MLLGGLIDTLTGANKSARPKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISST 290 MLLGGLIDTLTGANKSAR KGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISST Sbjct: 1 MLLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISST 60 Query: 291 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTXESKFGLTFDWEVEKLXVPGAIVVN 455 AVDQDNGGRGKVGAEAELEQWVTSLPSLTT ESKFGLTFDWEVEKL VPGAIVVN Sbjct: 61 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVVN 115
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 188 bits (477), Expect = 7e-48 Identities = 91/114 (79%), Positives = 106/114 (92%), Gaps = 1/114 (0%) Frame = +3 Query: 114 LLGGLIDTLTGANKSARPKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTA 293 +LGG+IDT+TG++K +R KGTVVLMRKNVLDLNDFGAT+IDG+GEFLGKGVTCQLISSTA Sbjct: 1 MLGGIIDTITGSSKQSRLKGTVVLMRKNVLDLNDFGATVIDGLGEFLGKGVTCQLISSTA 60 Query: 294 VDQDNGGRGKVGAEAELEQWVT-SLPSLTTXESKFGLTFDWEVEKLXVPGAIVV 452 VD +NG RGKVGAEA LEQW+T SLPSLTT ES+FG+TFDW+V+KL VPGAI+V Sbjct: 61 VDPNNGNRGKVGAEASLEQWLTSSLPSLTTGESRFGVTFDWDVDKLGVPGAIIV 114
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 173 bits (438), Expect = 2e-43 Identities = 82/113 (72%), Positives = 100/113 (88%) Frame = +3 Query: 114 LLGGLIDTLTGANKSARPKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTA 293 +LGG+I LTG NK+AR KG++VLMRKN LD+NDFGAT+IDGI EFLG+GVTCQL+SS+ Sbjct: 1 MLGGIIGGLTG-NKNARLKGSLVLMRKNALDINDFGATVIDGISEFLGRGVTCQLVSSSL 59 Query: 294 VDQDNGGRGKVGAEAELEQWVTSLPSLTTXESKFGLTFDWEVEKLXVPGAIVV 452 VD +NG RG+VG EA LEQW+TSLPSLTT ESKFG+TF+WEVEK+ +PGAI+V Sbjct: 60 VDPNNGNRGRVGTEASLEQWLTSLPSLTTGESKFGVTFEWEVEKMGIPGAIIV 112
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 116 bits (290), Expect = 3e-26 Identities = 57/113 (50%), Positives = 80/113 (70%) Frame = +3 Query: 114 LLGGLIDTLTGANKSARPKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTA 293 +LGGL D LTG N + + KG VLM + +LD DF A+++D + E G +TCQL+S+T Sbjct: 1 MLGGLKDKLTGKNGN-KIKGLAVLMSRKLLDPRDFTASLLDNVHEVFGNSITCQLVSATV 59 Query: 294 VDQDNGGRGKVGAEAELEQWVTSLPSLTTXESKFGLTFDWEVEKLXVPGAIVV 452 DQ+N GRG VG+EA LEQ +T LPS++ ESK + F+WE++K VPGAI++ Sbjct: 60 ADQNNEGRGIVGSEANLEQGLTDLPSVSQGESKLTVRFNWEMDKHGVPGAIII 112
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 110 bits (274), Expect = 2e-24 Identities = 55/119 (46%), Positives = 76/119 (63%), Gaps = 3/119 (2%) Frame = +3 Query: 114 LLGGLIDTLTGANKSA---RPKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLIS 284 + G L D LTG + KGTVVLM+KNVLD NDF A+ +D + EFLG +T +L+S Sbjct: 1 MFGELRDLLTGGGNETTTKKVKGTVVLMKKNVLDFNDFNASFLDRLHEFLGNKITLRLVS 60 Query: 285 STAVDQDNGGRGKVGAEAELEQWVTSLPSLTTXESKFGLTFDWEVEKLXVPGAIVVNTT 461 S D +NG +GK+G A LE W+T++ SLT ES F +TFD+E + PGA ++ + Sbjct: 61 SDVTDSENGSKGKLGKAAHLEDWITTITSLTAGESAFKVTFDYETD-FGYPGAFLIRNS 118
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 102 bits (253), Expect = 6e-22 Identities = 50/114 (43%), Positives = 76/114 (66%) Frame = +3 Query: 111 MLLGGLIDTLTGANKSARPKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISST 290 M LGG++D + G + + KG V+LM+KNVLD + GA+++DGI + LG+ V+ QLIS Sbjct: 1 MSLGGIVDAILGKDDRPKVKGRVILMKKNVLDFINIGASVVDGISDLLGQKVSIQLISG- 59 Query: 291 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTXESKFGLTFDWEVEKLXVPGAIVV 452 +V+ D G GK+ A LE W+T + +T ES F +TFDW+ ++ VPGA ++ Sbjct: 60 SVNYD-GLEGKLSNPAYLESWLTDITPITAGESTFSVTFDWDRDEFGVPGAFII 112
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 99.8 bits (247), Expect = 3e-21 Identities = 55/123 (44%), Positives = 78/123 (63%), Gaps = 6/123 (4%) Frame = +3 Query: 111 MLLGGLIDTLTGANKSA----RPKGTVVLMRKNVLDLNDFGATIIDGIGEFLG--KGVTC 272 M + G D LTG NK A R +GT VL++K+VL L DF A+++DG+ LG +GV Sbjct: 1 MQVQGFFDRLTGRNKEAWKEGRIRGTAVLVKKDVLGLGDFHASLLDGVHNILGHKEGVAF 60 Query: 273 QLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTXESKFGLTFDWEVEKLXVPGAIVV 452 +L+S+TA D NGGRGK+G A LE+ V ++ S ES F + F+W+ E +PGA+VV Sbjct: 61 RLVSATARDPSNGGRGKLGKPAHLEELVVTMKSTAAGESVFRVAFEWD-ESQGIPGAVVV 119 Query: 453 NTT 461 + Sbjct: 120 TNS 122
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 89.0 bits (219), Expect = 5e-18 Identities = 52/113 (46%), Positives = 69/113 (61%) Frame = +3 Query: 114 LLGGLIDTLTGANKSARPKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTA 293 L+GGLI G + S + KGTVV+M+KN LD D ++ D I E LG+ V+ QLISS Sbjct: 5 LVGGLIG---GHHDSKKVKGTVVMMKKNALDFTDLAGSLTDKIFEALGQKVSFQLISSVQ 61 Query: 294 VDQDNGGRGKVGAEAELEQWVTSLPSLTTXESKFGLTFDWEVEKLXVPGAIVV 452 D NG +GK A LE ++ +L L E+ FG+TFDW E+ VPGA V+ Sbjct: 62 SDPANGLQGKHSNPAYLENFLLTLTPLAAGETAFGVTFDWN-EEFGVPGAFVI 113
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 79.3 bits (194), Expect = 4e-15 Identities = 51/119 (42%), Positives = 68/119 (57%), Gaps = 18/119 (15%) Frame = +3 Query: 150 NKSARPKGTVVLMRKNVLDLN--------------DFGATII----DGIGEFLGKGVTCQ 275 NK + +GTVVLMRKNVLD N D G II DG+ FLG+ V+ Q Sbjct: 10 NKGHKIRGTVVLMRKNVLDFNTIVSIGGGNVHGVIDSGINIIGSTLDGLTAFLGRSVSLQ 69 Query: 276 LISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTXESKFGLTFDWEVEKLXVPGAIVV 452 LIS+T D + G+GKVG + LE + SLP+L ES F + F+W+ E + +PGA + Sbjct: 70 LISATKSDAN--GKGKVGKDTFLEGVLASLPTLGAGESAFNIHFEWDHE-MGIPGAFYI 125
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 77.8 bits (190), Expect = 1e-14 Identities = 46/104 (44%), Positives = 62/104 (59%), Gaps = 1/104 (0%) Frame = +3 Query: 144 GANKSARPKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTAVDQDNGGRGK 323 G + S + KGTVV+M KNVLD D ++ I + LG+ V+ QLISS D NG +GK Sbjct: 12 GHDDSKKVKGTVVMMNKNVLDFTDLAGSLTGKIFDVLGQKVSFQLISSVQGDPTNGLQGK 71 Query: 324 VGAEAELEQWVTSLPSLTT-XESKFGLTFDWEVEKLXVPGAIVV 452 A LE + +L LT E+ FG+TFDW E+ VPGA ++ Sbjct: 72 HSNPAYLENSLFTLTPLTAGSETAFGVTFDWN-EEFGVPGAFII 114
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 75.1 bits (183), Expect = 8e-14 Identities = 44/114 (38%), Positives = 66/114 (57%), Gaps = 13/114 (11%) Frame = +3 Query: 150 NKSARPKGTVVLMRKNVLDLN-------------DFGATIIDGIGEFLGKGVTCQLISST 290 N+ + KGTVVLMRKNVLD+N D + +D + FLG+ V+ QLIS+T Sbjct: 10 NRGHKIKGTVVLMRKNVLDINSLTTVGGVIGQGFDILGSTVDNLTAFLGRSVSLQLISAT 69 Query: 291 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTXESKFGLTFDWEVEKLXVPGAIVV 452 D G+GK+G LE ++SLP+L +S F + F+W+ + + +PGA + Sbjct: 70 KPDAT--GKGKLGKATFLEGIISSLPTLGAGQSAFKIHFEWD-DDMGIPGAFYI 120
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 75.1 bits (183), Expect = 8e-14 Identities = 43/95 (45%), Positives = 60/95 (63%) Frame = +3 Query: 168 KGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTAVDQDNGGRGKVGAEAELE 347 KGTVVLM KN L++N G+ + D + FLG+ V+ QLIS+T D G+GKVG + LE Sbjct: 9 KGTVVLMPKNELEVNPDGSAV-DNLNAFLGRSVSLQLISATKADAH--GKGKVGKDTFLE 65 Query: 348 QWVTSLPSLTTXESKFGLTFDWEVEKLXVPGAIVV 452 TSLP+L ES F + F+W+ + +PGA + Sbjct: 66 GINTSLPTLGAGESAFNIHFEWD-GSMGIPGAFYI 99
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 71.2 bits (173), Expect = 1e-12 Identities = 44/113 (38%), Positives = 60/113 (53%), Gaps = 18/113 (15%) Frame = +3 Query: 168 KGTVVLMRKNVLDLNDFG------------------ATIIDGIGEFLGKGVTCQLISSTA 293 KGTVVLMRKNVLD N + +D + FLG+ V QLIS+T Sbjct: 20 KGTVVLMRKNVLDFNSVADLTKGNVGGLIGTGLNVVGSTLDNLTAFLGRSVALQLISATK 79 Query: 294 VDQDNGGRGKVGAEAELEQWVTSLPSLTTXESKFGLTFDWEVEKLXVPGAIVV 452 + G+GKVG + LE + SLP+L ES F + F+W+ E + +PGA + Sbjct: 80 PLAN--GKGKVGKDTFLEGIIVSLPTLGAGESAFNIQFEWD-ESMGIPGAFYI 129
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 70.5 bits (171), Expect = 2e-12 Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 13/114 (11%) Frame = +3 Query: 114 LLGGLIDTLTGANKSARPKGTVVLMRKNVLDLN-------------DFGATIIDGIGEFL 254 +LGGL+ ++ + KGTVVLMRKNVL +N D + +D + FL Sbjct: 1 MLGGLL------HRGHKIKGTVVLMRKNVLHVNSVTSVGGIIGQGLDLVGSTLDTLTAFL 54 Query: 255 GKGVTCQLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTXESKFGLTFDWE 416 G+ V+ QLIS+T D + G+GK+G LE +TSLP+L +S F + F+W+ Sbjct: 55 GRPVSLQLISATKADAN--GKGKLGKATFLEGIITSLPTLGAGQSAFKINFEWD 106
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 68.9 bits (167), Expect = 6e-12 Identities = 44/115 (38%), Positives = 61/115 (53%), Gaps = 20/115 (17%) Frame = +3 Query: 168 KGTVVLMRKNVLDLNDFGA--------------------TIIDGIGEFLGKGVTCQLISS 287 KGTV+LM+KNVLD+N A +IID FLG+ V +LIS+ Sbjct: 13 KGTVILMQKNVLDINALTAAQSPSGIIGGAFGVVGSIAGSIIDTATAFLGRSVRLRLISA 72 Query: 288 TAVDQDNGGRGKVGAEAELEQWVTSLPSLTTXESKFGLTFDWEVEKLXVPGAIVV 452 T D G+GKV EA LE +TS+P+L +S F + F+W+ + PGA + Sbjct: 73 TVADAS--GKGKVSKEAFLEGLLTSIPTLGDKQSAFSVHFEWD-SNMGTPGAFYI 124
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 67.0 bits (162), Expect = 2e-11 Identities = 42/123 (34%), Positives = 63/123 (51%), Gaps = 22/123 (17%) Frame = +3 Query: 150 NKSARPKGTVVLMRKNVLDLNDF------------------GATIIDGIGE----FLGKG 263 +K + KGTVVLM KNVLD N G +++ G+ + FLG+ Sbjct: 6 DKGQKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRN 65 Query: 264 VTCQLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTXESKFGLTFDWEVEKLXVPGA 443 ++ QLIS+T D G GKVG E LE+ + +LP+L + F + F+W+ +PGA Sbjct: 66 ISMQLISATQTD--GSGNGKVGKEVYLEKHLPTLPTLGARQDAFSIFFEWDA-SFGIPGA 122 Query: 444 IVV 452 + Sbjct: 123 FYI 125
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 63.9 bits (154), Expect = 2e-10 Identities = 41/123 (33%), Positives = 59/123 (47%), Gaps = 22/123 (17%) Frame = +3 Query: 150 NKSARPKGTVVLMRKNVLDLNDFGAT----------------------IIDGIGEFLGKG 263 N+ + KGTVVLM KNV D N+F +T I+DG + Sbjct: 6 NRGHKIKGTVVLMTKNVFDFNEFVSTTRGGIVGAAGGLFGAATDIVGGIVDGATAIFSRN 65 Query: 264 VTCQLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTXESKFGLTFDWEVEKLXVPGA 443 + QLIS+T D G GKVG + LE+ + SLP+L + F + F+W+ E +P A Sbjct: 66 IAIQLISATKTD--GLGNGKVGKQTFLEKHLPSLPNLGDRQDAFNVYFEWD-ENFGIPEA 122 Query: 444 IVV 452 + Sbjct: 123 FYI 125
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 60.8 bits (146), Expect = 2e-09 Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 13/113 (11%) Frame = +3 Query: 153 KSARPKGTVVLMRKNVLDLNDF---GATIIDGIGEFLGKGV----------TCQLISSTA 293 K + KGT+V+M+KNVLD+N G + G+G F+G V + QLIS+T Sbjct: 7 KGQKIKGTMVVMQKNVLDINSITSVGGIVDQGLG-FIGSAVDALTFAATKISIQLISATK 65 Query: 294 VDQDNGGRGKVGAEAELEQWVTSLPSLTTXESKFGLTFDWEVEKLXVPGAIVV 452 D GG+GK+G L +T LP+L E + + F+W+ + +PGA + Sbjct: 66 AD---GGKGKIGKSTNLRGKIT-LPTLGAGEQAYDVNFEWDSD-FGIPGAFYI 113
>SDK2_HUMAN (Q58EX2) Protein sidekick-2 precursor| Length = 2170 Score = 33.1 bits (74), Expect = 0.36 Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%) Frame = -2 Query: 421 STSQSKVRPNLDSXVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLPRNSP 242 S + + R LDS V+ +V C +S + PRP ++W +++ LPR +P Sbjct: 397 SIAPNITRGPLDSTVIDGMSVVLACETSGA----PRPAITWQKGERILASGSVQLPRFTP 452 Query: 241 MP--SMMVAP 218 + S++++P Sbjct: 453 LESGSLLISP 462
>OAR_MYXXA (P38370) Protein oar precursor| Length = 1061 Score = 32.0 bits (71), Expect = 0.79 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = +3 Query: 135 TLTGANKSARPKGTVVLMRKNVLDLNDFGATI 230 TL G K R +GTV+ + + +L DFGAT+ Sbjct: 261 TLEGTRKQIREEGTVITGQNQLQNLGDFGATL 292
>NCOA6_HUMAN (Q14686) Nuclear receptor coactivator 6 (Amplified in breast cancer| protein 3) (Cancer-amplified transcriptional coactivator ASC-2) (Activating signal cointegrator 2) (ASC-2) (Peroxisome proliferator-activated receptor-interacting protein) (P Length = 2063 Score = 30.4 bits (67), Expect = 2.3 Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 3/99 (3%) Frame = -2 Query: 421 STSQSKVRPNLDSXVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTP---LPR 251 S +QS RP + V + + + T P PL+ ++ + S V +P+ Sbjct: 1645 SAAQSNARPQFITPVFINSSSIIQVMKGSQPSTIPAAPLTTNSGLMPPSVAVVGPLHIPQ 1704 Query: 250 NSPMPSMMVAPKSLRSSTFLRMSTTVPLGRALLFAPVRV 134 N S V P +L SS + T PL + PV++ Sbjct: 1705 NIKFSSAPVPPNALSSSPAPNIQTGRPLVLSSRATPVQL 1743
>WEB1_YEAST (P38968) Protein WEB1 (Protein transport protein SEC31)| Length = 1273 Score = 30.0 bits (66), Expect = 3.0 Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 1/46 (2%) Frame = -2 Query: 334 SAPTFPRPPLSWS-TAVELISWQVTPLPRNSPMPSMMVAPKSLRSS 200 +A T P PPLS + ++V ++S PL +NS +PS++ +S R+S Sbjct: 960 AASTMPPPPLSRAPSSVSMVS--PPPLHKNSRVPSLVATSESPRAS 1003
>SDK2_CHICK (Q8AV57) Protein sidekick-2 precursor| Length = 2177 Score = 29.6 bits (65), Expect = 3.9 Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 7/74 (9%) Frame = -2 Query: 409 SKVRPNL-----DSXVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLPRNS 245 + + PN+ DS V+ ++ +C +S + PRP ++W +++ LPR + Sbjct: 403 TSIAPNITRGPQDSTVIDGMSVILNCETSGA----PRPAITWQKGERILASGSVQLPRFT 458 Query: 244 PMP--SMMVAPKSL 209 + S++V+P L Sbjct: 459 LLESGSLLVSPAHL 472
>NU124_SCHPO (Q09904) Nucleoporin nup124 (Nuclear pore protein nup124)| Length = 1159 Score = 29.3 bits (64), Expect = 5.1 Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 14/88 (15%) Frame = -2 Query: 421 STSQSKVRPNLDSXVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLP---- 254 STS +P LD+ +DG S ASA P+P + + + S TP P Sbjct: 842 STSNETTKPQLDTSSKTDGVTANAPFSFASAFNAPKPSTNTADGKDSASNLTTPSPAFSF 901 Query: 253 ----------RNSPMPSMMVAPKSLRSS 200 N+P + AP S +S Sbjct: 902 GNNSGVKASSNNNPSTNSSTAPFSFGTS 929
>SDK2_MOUSE (Q6V4S5) Protein sidekick-2 precursor| Length = 2176 Score = 29.3 bits (64), Expect = 5.1 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 2/70 (2%) Frame = -2 Query: 421 STSQSKVRPNLDSXVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLPRNSP 242 S + + R LDS V+ +V C +S + PRP ++W +++ LPR + Sbjct: 403 SIAPNITRGPLDSTVIDGMSVVLACETSGA----PRPAITWQKGERILASGSVQLPRFTL 458 Query: 241 MP--SMMVAP 218 + S++++P Sbjct: 459 LESGSLLISP 468
>PCD12_HUMAN (Q9NPG4) Protocadherin-12 precursor (Vascular cadherin-2) (Vascular| endothelial cadherin-2) (VE-cadherin-2) (VE-cad-2) Length = 1184 Score = 28.9 bits (63), Expect = 6.7 Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 5/68 (7%) Frame = +3 Query: 138 LTGANKSARPKGTVVLMRKNVLDLNDFGATIIDG-----IGEFLGKGVTCQLISSTAVDQ 302 LT + PK L++ NVLD ND + I E G LI TA D Sbjct: 214 LTAYDNGNPPKSGTSLVKVNVLDSNDNSPAFAESSLALEIQEDAAPGTL--LIKLTATDP 271 Query: 303 DNGGRGKV 326 D G G+V Sbjct: 272 DQGPNGEV 279
>RD23C_ARATH (Q84L31) Putative DNA repair protein RAD23-3 (RAD23-like protein 3)| (AtRAD23-3) Length = 419 Score = 28.9 bits (63), Expect = 6.7 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 1/71 (1%) Frame = -2 Query: 442 APGTXSFSTSQSK-VRPNLDSXVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQV 266 A + S TSQ+K + P+ +S + + A APT P PP T + + + Sbjct: 83 AASSASAGTSQAKSIPPSTSQPSISPQTPASVSAPVAPAPTRPPPPAPTPTPAPVAATET 142 Query: 265 TPLPRNSPMPS 233 P P+P+ Sbjct: 143 VTTPIPEPVPA 153
>AGO2_DROME (Q9VUQ5) Argonaute 2 protein| Length = 1214 Score = 28.9 bits (63), Expect = 6.7 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = +2 Query: 74 GAVKARRGGQEQDAAGRADRHPHGGEQERPAQGHGGAHAQER 199 G + R GQ+Q + + GG Q+RP+ G H Q R Sbjct: 315 GGYQQRPSGQQQGGHQQGRQGQEGGYQQRPSGQQQGGHQQGR 356 Score = 28.9 bits (63), Expect = 6.7 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = +2 Query: 74 GAVKARRGGQEQDAAGRADRHPHGGEQERPAQGHGGAHAQER 199 G + R GQ+Q + + GG Q+RP+ G H Q R Sbjct: 292 GGYQQRPSGQQQGGHQQGRQGQEGGYQQRPSGQQQGGHQQGR 333
>HEM6_SOYBN (P35055) Coproporphyrinogen III oxidase, chloroplast precursor (EC| 1.3.3.3) (Coproporphyrinogenase) (Coprogen oxidase) Length = 385 Score = 28.9 bits (63), Expect = 6.7 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 11/66 (16%) Frame = -2 Query: 352 HCSSSASAPTFPRPPLSWS-----TAVELI--SWQVTPLPRNSPMPSMM----VAPKSLR 206 HC+S SAP++ P S S TA+ L SW+ P P+ + + P++ R Sbjct: 3 HCASIVSAPSYAFPFRSGSASTTPTAISLTKRSWKPPPSMAKGPVRATVSIEKETPEANR 62 Query: 205 SSTFLR 188 TFLR Sbjct: 63 PETFLR 68
>CFLAR_MOUSE (O35732) CASP8 and FADD-like apoptosis regulator precursor| (Cellular FLICE-like inhibitory protein) (c-FLIP) (Caspase-eight-related protein) (Casper) (Caspase-like apoptosis regulatory protein) (CLARP) (MACH-related inducer of toxicity) (MRIT Length = 484 Score = 28.9 bits (63), Expect = 6.7 Identities = 18/68 (26%), Positives = 32/68 (47%) Frame = +3 Query: 186 MRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTAVDQDNGGRGKVGAEAELEQWVTSL 365 +R+N ++D+ +++ IGE L + L+ T + +D GRGK+ + V L Sbjct: 88 LRRNPHLVSDYRVLLME-IGESLDQNDVSSLVFLTRITRDYTGRGKIAKDKSFLDLVIEL 146 Query: 366 PSLTTXES 389 L S Sbjct: 147 EKLNLIAS 154
>PACC_SCLSC (Q9P413) pH-response transcription factor pacC/RIM101| Length = 625 Score = 25.8 bits (55), Expect(2) = 8.3 Identities = 22/67 (32%), Positives = 29/67 (43%) Frame = -2 Query: 397 PNLDSXVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLPRNSPMPSMMVAP 218 P++ + S TH S S S+ T P S S V+ NSPM S ++P Sbjct: 382 PHVSTSYASAPMTATHSSHSVSSGTPALTPPSSS---------VSYTSGNSPMSSSGMSP 432 Query: 217 KSLRSST 197 S SST Sbjct: 433 ISRHSST 439 Score = 21.2 bits (43), Expect(2) = 8.3 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = -3 Query: 123 LPAASCSWPPLLAFTAPTNGTSTLF 49 LPA + + P + TAPT+ T F Sbjct: 447 LPAVTLGYSPHHSATAPTSTLGTNF 471
>SCA4_RICAU (Q9AJ64) Antigenic heat-stable 120 kDa protein (PS120) (120 kDa| antigen) (Protein PS 120) (Fragment) Length = 991 Score = 28.5 bits (62), Expect = 8.7 Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Frame = +3 Query: 93 EEAKNKMLLGGLIDTLTGANKSARPKGTVVLMRKNVLDLNDF-GATIIDGIGEFLGKGVT 269 ++ + + G+ DT+ +N S + KGT+++ + ++ ++ A +G L KGV Sbjct: 526 DDTSRAVAIDGITDTVIKSNLSTKDKGTMLIAVGDKVNASELSNAEKQQLLGSVLKKGVE 585 Query: 270 CQLIS 284 Q++S Sbjct: 586 TQVLS 590
>WSCK_DROME (P83097) Putative tyrosine-protein kinase Wsck precursor (EC| 2.7.10.1) Length = 791 Score = 28.5 bits (62), Expect = 8.7 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Frame = +3 Query: 123 GLIDTLTGANKSARPKGTVVLMRKNVLDLNDFG-ATIIDGIGEFLGKGVTCQLISS 287 GL+ TL G K+ +GT ++V L+DF AT G + VTC + S Sbjct: 362 GLVSTLEGVTKTMYSRGT---HDQHVTSLDDFSYATFEKGQSSVVALAVTCVIFGS 414
>SCRT2_HUMAN (Q9NQ03) Transcriptional repressor scratch 2 (Scratch homolog 2| zinc finger protein) Length = 307 Score = 28.5 bits (62), Expect = 8.7 Identities = 15/38 (39%), Positives = 16/38 (42%) Frame = +2 Query: 74 GAVKARRGGQEQDAAGRADRHPHGGEQERPAQGHGGAH 187 G + RRGG DA G D GG R GG H Sbjct: 116 GRSRRRRGGGGGDAGGSGDAGGAGGRAGRAGAQAGGGH 153 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,325,282 Number of Sequences: 219361 Number of extensions: 840500 Number of successful extensions: 3665 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 3415 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3624 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2968155324 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)