Clone Name | bastl45d06 |
---|---|
Clone Library Name | barley_pub |
>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds Length = 2818 Score = 801 bits (404), Expect = 0.0 Identities = 411/414 (99%) Strand = Plus / Plus Query: 43 agtgaaaaacagtgtgctggtgccattggttggagcagtgaaagcgaggagaggaggcca 102 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agtgaaaaacagtgtgctggtgccattggttggagcagtgaaagcgaggagaggaggcca 60 Query: 103 agaacaagatgctgctgggagggctgatcgacaccctcacgggggcgaacaagagcgccc 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agaacaagatgctgctgggagggctgatcgacaccctcacgggggcgaacaagagcgccc 120 Query: 163 ggcccaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcg 222 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggctcaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggcg 180 Query: 223 ccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatca 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatca 240 Query: 283 gctccaccgccgtcgaccaagacaacggcggtcgcgggaaggtgggcgcggaggcggagc 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gctccaccgccgtcgaccaagacaacggcggtcgcgggaaggtgggcgcggaggcggagc 300 Query: 343 tggagcagtgggtgacgagcctgccgtcgctgacgacggnggagtccaagttcggcctca 402 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 301 tggagcagtgggtgacgagcctgccgtcgctgacgacgggggagtccaagttcggcctca 360 Query: 403 ccttcgactgggaggtggagaagctcngggtgccgggcgccatcgtcgtcaaca 456 |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 361 ccttcgactgggaggtggagaagctcggggtgccgggcgccatcgtcgtcaaca 414
>gb|U83904.1|HVU83904 Hordeum vulgare lipoxygenase isoenzyme 1 (Lox:Hv1) gene, promoter region and partial cds Length = 5236 Score = 579 bits (292), Expect = e-162 Identities = 298/300 (99%) Strand = Plus / Plus Query: 4 cacacacactcacgcaacacacatccatcttcactgaaaagtgaaaaacagtgtgctggt 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3405 cacacacactcacgcaacacacatccatcttcactgaaaagtgaaaaacagtgtgctggt 3464 Query: 64 gccattggttggagcagtgaaagcgaggagaggaggccaagaacaagatgctgctgggag 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3465 gccattggttggagcagtgaaagcgaggagaggaggccaagaacaagatgctgctgggag 3524 Query: 124 ggctgatcgacaccctcacgggggcgaacaagagcgcccggcccaagggcacggtggtgc 183 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 3525 ggctgatcgacaccctcacgggggcgaacaagagcgcccggctcaagggcacggtggtgc 3584 Query: 184 tcatgcgcaagaacgtgctggacctcaacgacttcggcgccaccatcatcgacggcatcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3585 tcatgcgcaagaacgtgctggacctcaacgacttcggcgccaccatcatcgacggcatcg 3644 Query: 244 gcgagttcctcggcaagggcgtcacctgccagcttatcagctccaccgccgtcgaccaag 303 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 3645 gcgagttcctcggcaagggcgtcacctgccagcttatcagctccaccgccatcgaccaag 3704 Score = 295 bits (149), Expect = 6e-77 Identities = 153/155 (98%) Strand = Plus / Plus Query: 302 agacaacggcggtcgcgggaaggtgggcgcggaggcggagctggagcagtgggtgacgag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4253 agacaacggcggtcgcgggaaggtgggcgcggaggcggagctggagcagtgggtgacgag 4312 Query: 362 cctgccgtcgctgacgacggnggagtccaagttcggcctcaccttcgactgggaggtgga 421 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 4313 cctgccgtcgctgacgacgggggagtccaagttcggcctcaccttcgactgggaggtgga 4372 Query: 422 gaagctcngggtgccgggcgccatcgtcgtcaaca 456 ||||||| ||||||||||||||||||||||||||| Sbjct: 4373 gaagctcggggtgccgggcgccatcgtcgtcaaca 4407
>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds Length = 2595 Score = 325 bits (164), Expect = 7e-86 Identities = 276/314 (87%) Strand = Plus / Plus Query: 141 acgggggcgaacaagagcgcccggcccaagggcacggtggtgctcatgcgcaagaacgtg 200 ||||||||||||||| || |||| |||||||||||||||||||||||||||||||||| Sbjct: 28 acgggggcgaacaagcatgcgcggctcaagggcacggtggtgctcatgcgcaagaacgtg 87 Query: 201 ctggacctcaacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaag 260 ||||||||||||||||||||||||||| || | ||| ||||| ||||||||||||||||| Sbjct: 88 ctggacctcaacgacttcggcgccaccgtcgttgacagcatcagcgagttcctcggcaag 147 Query: 261 ggcgtcacctgccagcttatcagctccaccgccgtcgaccaagacaacggcggtcgcggg 320 || |||||||||||||| |||||||||||| ||||||| |||||||| |||||| Sbjct: 148 ggggtcacctgccagctcatcagctccaccctcgtcgacgccaacaacggcaaccgcggg 207 Query: 321 aaggtgggcgcggaggcggagctggagcagtgggtgacgagcctgccgtcgctgacgacg 380 ||| || ||||||||| | |||||||||||| ||||||||||||||||||||||||| Sbjct: 208 cgggtcggggcggaggcgaacctggagcagtggctgacgagcctgccgtcgctgacgacc 267 Query: 381 gnggagtccaagttcggcctcaccttcgactgggaggtggagaagctcngggtgccgggc 440 | ||||||||||||||| |||| ||||||||||||||||||||||| | |||||||| Sbjct: 268 ggcgagtccaagttcggcgtcacgttcgactgggaggtggagaagctgggagtgccgggg 327 Query: 441 gccatcgtcgtcaa 454 ||| |||||||||| Sbjct: 328 gccgtcgtcgtcaa 341
>gb|AF457968.1| Zea mays clone cho1c.pk002.j23, mRNA sequence Length = 515 Score = 325 bits (164), Expect = 7e-86 Identities = 276/314 (87%) Strand = Plus / Plus Query: 141 acgggggcgaacaagagcgcccggcccaagggcacggtggtgctcatgcgcaagaacgtg 200 ||||||||||||||| || |||| |||||||||||||||||||||||||||||||||| Sbjct: 90 acgggggcgaacaagcatgcgcggctcaagggcacggtggtgctcatgcgcaagaacgtg 149 Query: 201 ctggacctcaacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaag 260 ||||||||||||||||||||||||||| || | ||| ||||| ||||||||||||||||| Sbjct: 150 ctggacctcaacgacttcggcgccaccgtcgttgacagcatcagcgagttcctcggcaag 209 Query: 261 ggcgtcacctgccagcttatcagctccaccgccgtcgaccaagacaacggcggtcgcggg 320 || |||||||||||||| |||||||||||| ||||||| |||||||| |||||| Sbjct: 210 ggggtcacctgccagctcatcagctccaccctcgtcgacgccaacaacggcaaccgcggg 269 Query: 321 aaggtgggcgcggaggcggagctggagcagtgggtgacgagcctgccgtcgctgacgacg 380 ||| || ||||||||| | |||||||||||| ||||||||||||||||||||||||| Sbjct: 270 cgggtcggggcggaggcgaacctggagcagtggctgacgagcctgccgtcgctgacgacc 329 Query: 381 gnggagtccaagttcggcctcaccttcgactgggaggtggagaagctcngggtgccgggc 440 | ||||||||||||||| |||| ||||||||||||||||||||||| | |||||||| Sbjct: 330 ggcgagtccaagttcggcgtcacgttcgactgggaggtggagaagctgggagtgccgggg 389 Query: 441 gccatcgtcgtcaa 454 ||| |||||||||| Sbjct: 390 gccgtcgtcgtcaa 403
>ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2601 Score = 317 bits (160), Expect = 2e-83 Identities = 262/296 (88%), Gaps = 3/296 (1%) Strand = Plus / Plus Query: 162 cggcccaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggc 221 |||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 49 cggctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggc 108 Query: 222 gccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatc 281 |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 109 gccaccgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatc 168 Query: 282 agctccaccgccgtcgaccaagacaacggcggtcgcgggaaggtgggcgcggaggcggag 341 ||||||||||||||||||| | |||||||| || ||||||||||| ||||||||| Sbjct: 169 agctccaccgccgtcgacccaaacaacggcaaccgggggaaggtgggggcggaggcgagc 228 Query: 342 ctggagcagtgggtgacg---agcctgccgtcgctgacgacggnggagtccaagttcggc 398 |||||||||||| ||||| |||||||||||||||||||||| |||||| ||||||| Sbjct: 229 ctggagcagtggctgacgagcagcctgccgtcgctgacgacgggggagtcgcggttcggc 288 Query: 399 ctcaccttcgactgggaggtggagaagctcngggtgccgggcgccatcgtcgtcaa 454 | || ||||||||||| || || |||||| | |||||||| |||||| ||||||| Sbjct: 289 gtgacgttcgactgggacgtcgacaagctcggcgtgccgggggccatcatcgtcaa 344
>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16 map S2606, complete sequence Length = 124140 Score = 228 bits (115), Expect = 1e-56 Identities = 133/139 (95%) Strand = Plus / Plus Query: 162 cggcccaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggc 221 |||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 42884 cggctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggc 42943 Query: 222 gccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatc 281 |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 42944 gccaccgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatc 43003 Query: 282 agctccaccgccgtcgacc 300 ||||||||||||||||||| Sbjct: 43004 agctccaccgccgtcgacc 43022 Score = 103 bits (52), Expect = 5e-19 Identities = 118/140 (84%), Gaps = 3/140 (2%) Strand = Plus / Plus Query: 318 gggaaggtgggcgcggaggcggagctggagcagtgggtgacgagc---ctgccgtcgctg 374 ||||||||||| ||||||||| |||||||||||| |||||||| |||||||||||| Sbjct: 43438 gggaaggtgggggcggaggcgagcctggagcagtggctgacgagcagcctgccgtcgctg 43497 Query: 375 acgacggnggagtccaagttcggcctcaccttcgactgggaggtggagaagctcngggtg 434 ||||||| |||||| ||||||| | || ||||||||||| || || |||||| | ||| Sbjct: 43498 acgacgggggagtcgcggttcggcgtgacgttcgactgggacgtcgacaagctcggcgtg 43557 Query: 435 ccgggcgccatcgtcgtcaa 454 ||||| |||||| ||||||| Sbjct: 43558 ccgggggccatcatcgtcaa 43577
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 228 bits (115), Expect = 1e-56 Identities = 133/139 (95%) Strand = Plus / Plus Query: 162 cggcccaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggc 221 |||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 27798754 cggctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggc 27798813 Query: 222 gccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatc 281 |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 27798814 gccaccgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatc 27798873 Query: 282 agctccaccgccgtcgacc 300 ||||||||||||||||||| Sbjct: 27798874 agctccaccgccgtcgacc 27798892 Score = 117 bits (59), Expect = 3e-23 Identities = 128/151 (84%) Strand = Plus / Plus Query: 150 aacaagagcgcccggcccaagggcacggtggtgctcatgcgcaagaacgtgctggacctc 209 ||||||| |||||| | ||||||| | | || |||||||||||||||| || ||| || Sbjct: 30023293 aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatc 30023352 Query: 210 aacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacc 269 |||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||| Sbjct: 30023353 aacgacttcggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacc 30023412 Query: 270 tgccagcttatcagctccaccgccgtcgacc 300 |||||||| |||||||| || |||||||| Sbjct: 30023413 tgccagctcgtcagctcctccctcgtcgacc 30023443 Score = 105 bits (53), Expect = 1e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 342 ctggagcagtgggtgacgagcctgccgtcgctgacgacggnggagtccaagttcggcctc 401 |||||||||||| ||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 30023563 ctggagcagtggctgacgagcctgccgtcgctgacgacgggagagtccaagttcggggtg 30023622 Query: 402 accttcgactgggaggtggagaag 425 || ||||| ||||||||||||||| Sbjct: 30023623 acgttcgagtgggaggtggagaag 30023646 Score = 103 bits (52), Expect = 5e-19 Identities = 118/140 (84%), Gaps = 3/140 (2%) Strand = Plus / Plus Query: 318 gggaaggtgggcgcggaggcggagctggagcagtgggtgacgagc---ctgccgtcgctg 374 ||||||||||| ||||||||| |||||||||||| |||||||| |||||||||||| Sbjct: 27799308 gggaaggtgggggcggaggcgagcctggagcagtggctgacgagcagcctgccgtcgctg 27799367 Query: 375 acgacggnggagtccaagttcggcctcaccttcgactgggaggtggagaagctcngggtg 434 ||||||| |||||| ||||||| | || ||||||||||| || || |||||| | ||| Sbjct: 27799368 acgacgggggagtcgcggttcggcgtgacgttcgactgggacgtcgacaagctcggcgtg 27799427 Query: 435 ccgggcgccatcgtcgtcaa 454 ||||| |||||| ||||||| Sbjct: 27799428 ccgggggccatcatcgtcaa 27799447 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 acacactcacgcaacacaca 26 |||||||||||||||||||| Sbjct: 22625516 acacactcacgcaacacaca 22625535 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 20262030 gagaggaggccaagaacaag 20262049
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 228 bits (115), Expect = 1e-56 Identities = 133/139 (95%) Strand = Plus / Plus Query: 162 cggcccaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggc 221 |||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 27890078 cggctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggc 27890137 Query: 222 gccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatc 281 |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 27890138 gccaccgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatc 27890197 Query: 282 agctccaccgccgtcgacc 300 ||||||||||||||||||| Sbjct: 27890198 agctccaccgccgtcgacc 27890216 Score = 117 bits (59), Expect = 3e-23 Identities = 128/151 (84%) Strand = Plus / Plus Query: 150 aacaagagcgcccggcccaagggcacggtggtgctcatgcgcaagaacgtgctggacctc 209 ||||||| |||||| | ||||||| | | || |||||||||||||||| || ||| || Sbjct: 30114715 aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatc 30114774 Query: 210 aacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacc 269 |||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||| Sbjct: 30114775 aacgacttcggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacc 30114834 Query: 270 tgccagcttatcagctccaccgccgtcgacc 300 |||||||| |||||||| || |||||||| Sbjct: 30114835 tgccagctcgtcagctcctccctcgtcgacc 30114865 Score = 105 bits (53), Expect = 1e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 342 ctggagcagtgggtgacgagcctgccgtcgctgacgacggnggagtccaagttcggcctc 401 |||||||||||| ||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 30114985 ctggagcagtggctgacgagcctgccgtcgctgacgacgggagagtccaagttcggggtg 30115044 Query: 402 accttcgactgggaggtggagaag 425 || ||||| ||||||||||||||| Sbjct: 30115045 acgttcgagtgggaggtggagaag 30115068 Score = 103 bits (52), Expect = 5e-19 Identities = 118/140 (84%), Gaps = 3/140 (2%) Strand = Plus / Plus Query: 318 gggaaggtgggcgcggaggcggagctggagcagtgggtgacgagc---ctgccgtcgctg 374 ||||||||||| ||||||||| |||||||||||| |||||||| |||||||||||| Sbjct: 27890632 gggaaggtgggggcggaggcgagcctggagcagtggctgacgagcagcctgccgtcgctg 27890691 Query: 375 acgacggnggagtccaagttcggcctcaccttcgactgggaggtggagaagctcngggtg 434 ||||||| |||||| ||||||| | || ||||||||||| || || |||||| | ||| Sbjct: 27890692 acgacgggggagtcgcggttcggcgtgacgttcgactgggacgtcgacaagctcggcgtg 27890751 Query: 435 ccgggcgccatcgtcgtcaa 454 ||||| |||||| ||||||| Sbjct: 27890752 ccgggggccatcatcgtcaa 27890771 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 acacactcacgcaacacaca 26 |||||||||||||||||||| Sbjct: 22618545 acacactcacgcaacacaca 22618564 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 20255059 gagaggaggccaagaacaag 20255078
>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete sequence Length = 119329 Score = 228 bits (115), Expect = 1e-56 Identities = 133/139 (95%) Strand = Plus / Minus Query: 162 cggcccaagggcacggtggtgctcatgcgcaagaacgtgctggacctcaacgacttcggc 221 |||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 15139 cggctcaagggcacggtggtgctcatgcgcaagaacgtcctcgacctcaacgacttcggc 15080 Query: 222 gccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatc 281 |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 15079 gccaccgtcatcgacggcctcggcgagttcctcggcaagggcgtcacctgccagctcatc 15020 Query: 282 agctccaccgccgtcgacc 300 ||||||||||||||||||| Sbjct: 15019 agctccaccgccgtcgacc 15001 Score = 103 bits (52), Expect = 5e-19 Identities = 118/140 (84%), Gaps = 3/140 (2%) Strand = Plus / Minus Query: 318 gggaaggtgggcgcggaggcggagctggagcagtgggtgacgagc---ctgccgtcgctg 374 ||||||||||| ||||||||| |||||||||||| |||||||| |||||||||||| Sbjct: 14585 gggaaggtgggggcggaggcgagcctggagcagtggctgacgagcagcctgccgtcgctg 14526 Query: 375 acgacggnggagtccaagttcggcctcaccttcgactgggaggtggagaagctcngggtg 434 ||||||| |||||| ||||||| | || ||||||||||| || || |||||| | ||| Sbjct: 14525 acgacgggggagtcgcggttcggcgtgacgttcgactgggacgtcgacaagctcggcgtg 14466 Query: 435 ccgggcgccatcgtcgtcaa 454 ||||| |||||| ||||||| Sbjct: 14465 ccgggggccatcatcgtcaa 14446
>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds Length = 5013 Score = 204 bits (103), Expect = 2e-49 Identities = 145/159 (91%) Strand = Plus / Plus Query: 141 acgggggcgaacaagagcgcccggcccaagggcacggtggtgctcatgcgcaagaacgtg 200 ||||||||||||||| || |||| |||||||||||||||||||||||||||||||||| Sbjct: 176 acgggggcgaacaagcatgcgcggctcaagggcacggtggtgctcatgcgcaagaacgtg 235 Query: 201 ctggacctcaacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaag 260 ||||||||||||||||||||||||||| || | ||| ||||| ||||||||||||||||| Sbjct: 236 ctggacctcaacgacttcggcgccaccgtcgttgacagcatcagcgagttcctcggcaag 295 Query: 261 ggcgtcacctgccagcttatcagctccaccgccgtcgac 299 || |||||||||||||| |||||||||||| ||||||| Sbjct: 296 ggggtcacctgccagctcatcagctccaccctcgtcgac 334 Score = 149 bits (75), Expect = 9e-33 Identities = 112/125 (89%) Strand = Plus / Plus Query: 330 gcggaggcggagctggagcagtgggtgacgagcctgccgtcgctgacgacggnggagtcc 389 ||||||||| | |||||||||||| ||||||||||||||||||||||||| | |||||| Sbjct: 945 gcggaggcgaacctggagcagtggctgacgagcctgccgtcgctgacgaccggcgagtcc 1004 Query: 390 aagttcggcctcaccttcgactgggaggtggagaagctcngggtgccgggcgccatcgtc 449 ||||||||| |||| ||||||||||||||||||||||| | |||||||| ||| ||||| Sbjct: 1005 aagttcggcgtcacgttcgactgggaggtggagaagctgggagtgccgggggccgtcgtc 1064 Query: 450 gtcaa 454 ||||| Sbjct: 1065 gtcaa 1069
>ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2613 Score = 176 bits (89), Expect = 4e-41 Identities = 229/276 (82%) Strand = Plus / Plus Query: 150 aacaagagcgcccggcccaagggcacggtggtgctcatgcgcaagaacgtgctggacctc 209 ||||||| |||||| | ||||||| | | || |||||||||||||||| || ||| || Sbjct: 34 aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatc 93 Query: 210 aacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacc 269 |||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||| Sbjct: 94 aacgacttcggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacc 153 Query: 270 tgccagcttatcagctccaccgccgtcgaccaagacaacggcggtcgcgggaaggtgggc 329 |||||||| |||||||| || |||||||| |||| || | |||| |||||| Sbjct: 154 tgccagctcgtcagctcctccctcgtcgaccccaacaatgggaacagggggagggtgggg 213 Query: 330 gcggaggcggagctggagcagtgggtgacgagcctgccgtcgctgacgacggnggagtcc 389 |||||||| |||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 214 acggaggcgagcctggagcagtggctgacgagcctgccgtcgctgacgacgggagagtcc 273 Query: 390 aagttcggcctcaccttcgactgggaggtggagaag 425 |||||||| | || ||||| ||||||||||||||| Sbjct: 274 aagttcggggtgacgttcgagtgggaggtggagaag 309
>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full insert sequence Length = 2928 Score = 176 bits (89), Expect = 4e-41 Identities = 229/276 (82%) Strand = Plus / Plus Query: 150 aacaagagcgcccggcccaagggcacggtggtgctcatgcgcaagaacgtgctggacctc 209 ||||||| |||||| | ||||||| | | || |||||||||||||||| || ||| || Sbjct: 149 aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatc 208 Query: 210 aacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacc 269 |||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||| Sbjct: 209 aacgacttcggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacc 268 Query: 270 tgccagcttatcagctccaccgccgtcgaccaagacaacggcggtcgcgggaaggtgggc 329 |||||||| |||||||| || |||||||| |||| || | |||| |||||| Sbjct: 269 tgccagctcgtcagctcctccctcgtcgaccccaacaatgggaacagggggagggtgggg 328 Query: 330 gcggaggcggagctggagcagtgggtgacgagcctgccgtcgctgacgacggnggagtcc 389 |||||||| |||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 329 acggaggcgagcctggagcagtggctgacgagcctgccgtcgctgacgacgggagagtcc 388 Query: 390 aagttcggcctcaccttcgactgggaggtggagaag 425 |||||||| | || ||||| ||||||||||||||| Sbjct: 389 aagttcggggtgacgttcgagtgggaggtggagaag 424
>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 Length = 2830 Score = 161 bits (81), Expect = 2e-36 Identities = 227/276 (82%) Strand = Plus / Plus Query: 150 aacaagagcgcccggcccaagggcacggtggtgctcatgcgcaagaacgtgctggacctc 209 ||||||| |||||| | ||||||| | | || |||||||||||||||| || ||| || Sbjct: 131 aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatc 190 Query: 210 aacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacc 269 |||||||||||||||||| ||||||| ||||| ||||||||||||| ||||||||| Sbjct: 191 aacgacttcggcgccaccgtcatcgagcgcatctccgagttcctcggccgcggcgtcacc 250 Query: 270 tgccagcttatcagctccaccgccgtcgaccaagacaacggcggtcgcgggaaggtgggc 329 |||||||| |||||||| || |||||||| |||| || | |||| |||||| Sbjct: 251 tgccagctcgtcagctcctccctcgtcgaccccaacaatgggaacagggggagggtgggg 310 Query: 330 gcggaggcggagctggagcagtgggtgacgagcctgccgtcgctgacgacggnggagtcc 389 |||||||| |||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 311 acggaggcgagcctggagcagtggctgacgagcctgccgtcgctgacgacgggagagtcc 370 Query: 390 aagttcggcctcaccttcgactgggaggtggagaag 425 |||||||| | || ||||| ||||||||||||||| Sbjct: 371 aagttcggggtgacgttcgagtgggaggtggagaag 406
>gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds Length = 2910 Score = 157 bits (79), Expect = 4e-35 Identities = 148/171 (86%) Strand = Plus / Plus Query: 183 ctcatgcgcaagaacgtgctggacctcaacgacttcggcgccaccatcatcgacggcatc 242 |||||||||||||||| ||| ||| ||||||||||||||||| | |||| |||||| || Sbjct: 139 ctcatgcgcaagaacgcgctcgacttcaacgacttcggcgcccacgtcatggacggcgtc 198 Query: 243 ggcgagttcctcggcaagggcgtcacctgccagcttatcagctccaccgccgtcgaccaa 302 |||| |||||||| ||||||||||||||||| |||||||||||| ||||||||| Sbjct: 199 accgagctcctcggccgcggcgtcacctgccagctcatcagctccaccaacgtcgaccac 258 Query: 303 gacaacggcggtcgcgggaaggtgggcgcggaggcggagctggagcagtgg 353 ||||||| || |||||||||||||||||||||||| | |||||||||||| Sbjct: 259 aacaacggtgggcgcgggaaggtgggcgcggaggcgaacctggagcagtgg 309 Score = 61.9 bits (31), Expect = 2e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 389 caagttcggcctcaccttcgactgggaggtggagaagctcngggtgccgggcgccatcgt 448 |||||||| | |||||||||||||| |||||| ||||| |||||||||| |||||| | Sbjct: 351 caagttcgccgtcaccttcgactggtcggtggacaagctgggggtgccgggggccatcat 410 Query: 449 cgtcaa 454 |||||| Sbjct: 411 cgtcaa 416
>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds Length = 2845 Score = 131 bits (66), Expect = 2e-27 Identities = 108/122 (88%) Strand = Plus / Plus Query: 232 tcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatcagctccaccg 291 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 140 tcgacggcatcggcgagttcctcggccgcggcgtcacctgccagcttatcagctccaccg 199 Query: 292 ccgtcgaccaagacaacggcggtcgcgggaaggtgggcgcggaggcggagctggagcagt 351 |||||||| |||||||| ||||||||| |||||||||||||| |||||||||| Sbjct: 200 tcgtcgaccctaacaacggcaaccgcgggaagttgggcgcggaggcgagcctggagcagt 259 Query: 352 gg 353 || Sbjct: 260 gg 261 Score = 58.0 bits (29), Expect = 3e-05 Identities = 55/64 (85%) Strand = Plus / Plus Query: 391 agttcggcctcaccttcgactgggaggtggagaagctcngggtgccgggcgccatcgtcg 450 ||||| || ||||||||||||||||||||||||||| | | |||||||||||| ||| Sbjct: 299 agttccgcgtcaccttcgactgggaggtggagaagcagggcatcccgggcgccatcatcg 358 Query: 451 tcaa 454 |||| Sbjct: 359 tcaa 362
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete sequence Length = 155106 Score = 117 bits (59), Expect = 3e-23 Identities = 128/151 (84%) Strand = Plus / Minus Query: 150 aacaagagcgcccggcccaagggcacggtggtgctcatgcgcaagaacgtgctggacctc 209 ||||||| |||||| | ||||||| | | || |||||||||||||||| || ||| || Sbjct: 84458 aacaagaacgcccgcctcaagggctccctcgtcctcatgcgcaagaacgccctcgacatc 84399 Query: 210 aacgacttcggcgccaccatcatcgacggcatcggcgagttcctcggcaagggcgtcacc 269 |||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||| Sbjct: 84398 aacgacttcggcgccaccgtcatcgacggcatctccgagttcctcggccgcggcgtcacc 84339 Query: 270 tgccagcttatcagctccaccgccgtcgacc 300 |||||||| |||||||| || |||||||| Sbjct: 84338 tgccagctcgtcagctcctccctcgtcgacc 84308 Score = 105 bits (53), Expect = 1e-19 Identities = 76/84 (90%) Strand = Plus / Minus Query: 342 ctggagcagtgggtgacgagcctgccgtcgctgacgacggnggagtccaagttcggcctc 401 |||||||||||| ||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 84188 ctggagcagtggctgacgagcctgccgtcgctgacgacgggagagtccaagttcggggtg 84129 Query: 402 accttcgactgggaggtggagaag 425 || ||||| ||||||||||||||| Sbjct: 84128 acgttcgagtgggaggtggagaag 84105
>gb|AF465642.1| Zea mays Golden cross bantam-70 lipoxygenase gene, promoter region and partial cds Length = 3196 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 229 tcatcgacggcatcggcgagttcctcggcaagggcgtcacctgccagcttatcagctcca 288 |||| |||||| ||||||||||||||||| |||||||||||||| || ||||||||| Sbjct: 2387 tcatggacggcctcggcgagttcctcggccgcggcgtcacctgccaactcgtcagctcca 2446 Query: 289 ccgccgtcgacc 300 ||| |||||||| Sbjct: 2447 ccgtcgtcgacc 2458 Score = 67.9 bits (34), Expect = 3e-08 Identities = 54/61 (88%) Strand = Plus / Plus Query: 391 agttcggcctcaccttcgactgggaggtggagaagctcngggtgccgggcgccatcgtcg 450 ||||| || ||||||||||||||||||||||||||| | | || |||||||||||| ||| Sbjct: 2820 agttccgcgtcaccttcgactgggaggtggagaagcacggcgtcccgggcgccatcatcg 2879 Query: 451 t 451 | Sbjct: 2880 t 2880 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 178 tggtgctcatgcgcaagaacgtgct 202 |||||||||||||||||| |||||| Sbjct: 2330 tggtgctcatgcgcaagaccgtgct 2354
>gb|AF464895.1| Oryza sativa basmati-370 lipoxygenase (Lox) gene, partial cds Length = 1160 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 189 cgcaagaacgtgctggacctcaacgacttcggcgccaccatcatcgacggcatcggcgag 248 |||||||||| || ||| |||||||||||||||||||| || ||| || || |||| Sbjct: 1 cgcaagaacgccctcgacatcaacgacttcggcgccaccgtcctcgggcgcgtctccgag 60 Query: 249 ttcctcggcaagggcgtcacctgccagcttatcagctcc 287 ||||||||| ||||||||||||||||| |||||||| Sbjct: 61 ttcctcggccgcggcgtcacctgccagctcgtcagctcc 99 Score = 52.0 bits (26), Expect = 0.002 Identities = 34/37 (91%) Strand = Plus / Plus Query: 361 gcctgccgtcgctgacgacggnggagtccaagttcgg 397 |||||||||||| |||||||| |||||||||||||| Sbjct: 173 gcctgccgtcgcggacgacgggagagtccaagttcgg 209
>ref|NM_016967.2| Mus musculus oligodendrocyte transcription factor 2 (Olig2), mRNA Length = 2462 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 3 acacacacactcacgcaacacacat 27 ||||||||||||||||||||||||| Sbjct: 1890 acacacacactcacgcaacacacat 1914
>gb|AC034116.10| Mus musculus chromosome 16, clone RP23-428P5, complete sequence Length = 210023 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 3 acacacacactcacgcaacacacat 27 ||||||||||||||||||||||||| Sbjct: 161082 acacacacactcacgcaacacacat 161106
>gb|AC161374.6| Mus musculus BAC clone RP23-266O23 from chromosome 14, complete sequence Length = 202929 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 323 ggtgggcgcggaggcggagctggag 347 ||||||||||||||||||||||||| Sbjct: 65371 ggtgggcgcggaggcggagctggag 65347
>ref|XM_974706.1| PREDICTED: Mus musculus hypothetical protein LOC665118 (LOC665118), mRNA Length = 444 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 323 ggtgggcgcggaggcggagctggag 347 ||||||||||||||||||||||||| Sbjct: 230 ggtgggcgcggaggcggagctggag 206
>ref|XM_977694.1| PREDICTED: Mus musculus discs, large homolog 5 (Drosophila), transcript variant 2 (Dlg5), mRNA Length = 7853 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 323 ggtgggcgcggaggcggagctggag 347 ||||||||||||||||||||||||| Sbjct: 117 ggtgggcgcggaggcggagctggag 141
>gb|AC152503.5| Mus musculus BAC clone RP23-190G10 from chromosome 16, complete sequence Length = 204940 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 3 acacacacactcacgcaacacacat 27 ||||||||||||||||||||||||| Sbjct: 4074 acacacacactcacgcaacacacat 4098
>gb|AC163638.2| Mus musculus BAC clone RP23-188H10 from chromosome 14, complete sequence Length = 203950 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 323 ggtgggcgcggaggcggagctggag 347 ||||||||||||||||||||||||| Sbjct: 47104 ggtgggcgcggaggcggagctggag 47128
>dbj|AK147699.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1109K17 product:discs, large homolog 5 (Drosophila), full insert sequence Length = 7852 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 323 ggtgggcgcggaggcggagctggag 347 ||||||||||||||||||||||||| Sbjct: 118 ggtgggcgcggaggcggagctggag 142
>dbj|AK080615.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830025B18 product:oligodendrocyte transcription factor 2, full insert sequence Length = 2362 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 3 acacacacactcacgcaacacacat 27 ||||||||||||||||||||||||| Sbjct: 1868 acacacacactcacgcaacacacat 1892
>gb|BC051967.1| Mus musculus oligodendrocyte transcription factor 2, mRNA (cDNA clone MGC:62240 IMAGE:5695592), complete cds Length = 2462 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 3 acacacacactcacgcaacacacat 27 ||||||||||||||||||||||||| Sbjct: 1890 acacacacactcacgcaacacacat 1914
>dbj|AB038697.1| Mus musculus mRNA for Olig2 bHLH protein, complete cds Length = 2433 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 3 acacacacactcacgcaacacacat 27 ||||||||||||||||||||||||| Sbjct: 1869 acacacacactcacgcaacacacat 1893
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 434 gccgggcgccatcgtcgtcaacac 457 |||||||||||||||||||||||| Sbjct: 2111639 gccgggcgccatcgtcgtcaacac 2111662
>gb|AF178117.1|AF178117 Rhodospirillum rubrum polyhydroxyalkanoate synthase (PHA C) gene, complete cds Length = 2990 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 434 gccgggcgccatcgtcgtcaacac 457 |||||||||||||||||||||||| Sbjct: 734 gccgggcgccatcgtcgtcaacac 757
>gb|AY359572.1| Zea mays B73 acc oxidase (ACO15) gene, complete cds Length = 2960 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 436 cgggcgccatcgtcgtcaacact 458 ||||||||||||||||||||||| Sbjct: 2041 cgggcgccatcgtcgtcaacact 2063
>gb|AC120057.9| Homo sapiens chromosome 17, clone CTD-2545G14, complete sequence Length = 198821 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 acacacacactcacgcaacacac 25 ||||||||||||||||||||||| Sbjct: 67474 acacacacactcacgcaacacac 67496
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 325 tgggcgcggaggcggagctgga 346 |||||||||||||||||||||| Sbjct: 1904267 tgggcgcggaggcggagctgga 1904288
>gb|AC145591.5| Mus musculus BAC clone RP24-176N2 from chromosome 18, complete sequence Length = 167532 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gacacacacactcacgcaacacacat 27 ||||||||||||||| |||||||||| Sbjct: 60054 gacacacacactcacacaacacacat 60079
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 389 caagttcggcctcaccttcgac 410 |||||||||||||||||||||| Sbjct: 4616430 caagttcggcctcaccttcgac 4616409
>gb|AF079588.1|AF079588 Sorghum bicolor 1-aminocyclopropane-1-carboxylate oxidase (ACO1) mRNA, complete cds Length = 1444 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 436 cgggcgccatcgtcgtcaacac 457 |||||||||||||||||||||| Sbjct: 791 cgggcgccatcgtcgtcaacac 812
>gb|AF064859.1| Homo sapiens chromosome 21q22.3 PAC 141B3, complete sequence, containing ribosomal protein homologue pseudogene L23a Length = 122571 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 acacacacactcacgcaacacacat 27 |||||||||| |||||||||||||| Sbjct: 68724 acacacacacccacgcaacacacat 68748
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 cccggcccaagggcacggtgg 180 ||||||||||||||||||||| Sbjct: 259547 cccggcccaagggcacggtgg 259527
>gb|AY359573.1| Zea mays B73 acc oxidase (ACO31) mRNA, complete cds Length = 1240 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 437 gggcgccatcgtcgtcaacac 457 ||||||||||||||||||||| Sbjct: 759 gggcgccatcgtcgtcaacac 779
>emb|AL163278.2|HS21C078 Homo sapiens chromosome 21 segment HS21C078 Length = 340000 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 acacacacactcacgcaacacacat 27 |||||||||| |||||||||||||| Sbjct: 310134 acacacacacccacgcaacacacat 310158
>emb|AL355138.19| Human DNA sequence from clone RP11-203J14 on chromosome 10 Contains the gene for neuropeptide FF 1; RFamide-related peptide receptor (OT7T022), the 3' end of a novel gene (FLJ10751) and two CpG islands, complete sequence Length = 80236 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 gaggagaggaggccaagaaca 108 ||||||||||||||||||||| Sbjct: 46254 gaggagaggaggccaagaaca 46274
>ref|XM_965327.1| PREDICTED: Tribolium castaneum similar to CG7627-PA (LOC658981), mRNA Length = 4060 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 219 ggcgccaccatcatcgacggcatcg 243 ||||||| ||||||||||||||||| Sbjct: 3298 ggcgccatcatcatcgacggcatcg 3322
>emb|Z22956.1|NMHSP63A N.meningitidis of Hsp63 gene Length = 1632 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 223 ccaccatcatcgacggcatcggcga 247 ||||||||||||||||| ||||||| Sbjct: 989 ccaccatcatcgacggcttcggcga 1013
>emb|Z22955.1|NFHSP63A N.flavescens Hsp63 gene Length = 1632 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 223 ccaccatcatcgacggcatcggcga 247 ||||||||||||||||| ||||||| Sbjct: 989 ccaccatcatcgacggcttcggcga 1013
>emb|AL162753.2|NMA2Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment 2/7 Length = 349061 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 223 ccaccatcatcgacggcatcggcga 247 ||||||||||||||||| ||||||| Sbjct: 112319 ccaccatcatcgacggcttcggcga 112343
>dbj|D28817.1|ACNGROESL Actinobacillus actinomycetemcomitans groES and groEL genes, complete cds Length = 2389 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 223 ccaccatcatcgacggcatcggcga 247 |||||||||||||||| |||||||| Sbjct: 1517 ccaccatcatcgacggtatcggcga 1541
>gb|AC009051.8| Homo sapiens chromosome 16 clone RP11-238M18, complete sequence Length = 157691 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 cacacactcacgcaacacaca 26 ||||||||||||||||||||| Sbjct: 40763 cacacactcacgcaacacaca 40743
>gb|AY948318.1| Haliotis discus hannai clone KHdh50 microsatellite sequence Length = 51 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 acacacacactcacgcaacacacat 27 |||||||||||||| |||||||||| Sbjct: 18 acacacacactcacacaacacacat 42
>gb|AC136285.2| Homo sapiens chromosome 16 clone RP11-899L11, complete sequence Length = 235286 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 cacacactcacgcaacacaca 26 ||||||||||||||||||||| Sbjct: 137837 cacacactcacgcaacacaca 137817
>gb|AC133860.5| Oryza sativa chromosome 3 BAC OSJNBa0091E13 genomic sequence, complete sequence Length = 157397 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 acacactcacgcaacacaca 26 |||||||||||||||||||| Sbjct: 42630 acacactcacgcaacacaca 42611
>gb|AC154046.1| Drosophila melanogaster clone BACR29O22, complete sequence Length = 177480 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 acacacacactcacgcaacacaca 26 |||||||||||| ||||||||||| Sbjct: 166371 acacacacactctcgcaacacaca 166394
>gb|AC113991.4| Mus musculus chromosome 3, clone RP24-138E17, complete sequence Length = 138057 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 acacacacactcacgcaacacaca 26 |||||||||||||| ||||||||| Sbjct: 65918 acacacacactcacacaacacaca 65941
>gb|AC121298.10| Mus musculus chromosome 5, clone RP23-377E6, complete sequence Length = 194045 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 acacacacactcacgcaacacaca 26 |||||||||||||| ||||||||| Sbjct: 117541 acacacacactcacacaacacaca 117564
>ref|XM_474956.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3213 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 1601 gagaggaggccaagaacaag 1620
>ref|XM_464767.1| Oryza sativa (japonica cultivar-group), mRNA Length = 291 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 gctccaccgccgtcgaccaa 302 |||||||||||||||||||| Sbjct: 53 gctccaccgccgtcgaccaa 72
>ref|XM_463123.1| Oryza sativa (japonica cultivar-group), mRNA Length = 773 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 acacactcacgcaacacaca 26 |||||||||||||||||||| Sbjct: 113 acacactcacgcaacacaca 94
>ref|NM_196320.1| Oryza sativa (japonica cultivar-group) putative gag-pol precursor (OSJNBa0011L09.15), mRNA Length = 3339 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 1352 gagaggaggccaagaacaag 1371
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tcgacggcatcggcgagttc 251 |||||||||||||||||||| Sbjct: 82079 tcgacggcatcggcgagttc 82060
>gb|AC119932.7| Mus musculus chromosome 15, clone RP24-260C11, complete sequence Length = 170117 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 acacacacactcacgcaacacaca 26 |||||||||||||| ||||||||| Sbjct: 158855 acacacacactcacacaacacaca 158878
>gb|AY551431.1| Hordeum vulgare subsp. vulgare GA 3-oxidase 2 (GA3ox2) mRNA, complete cds Length = 1594 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 gtgccgggcgccatcgtcgtcaac 455 |||||||||||||| ||||||||| Sbjct: 912 gtgccgggcgccatggtcgtcaac 935
>gb|AC109311.12| Mus musculus chromosome 5, clone RP23-42K10, complete sequence Length = 191698 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 acacacacactcacgcaacacaca 26 |||||||||| ||||||||||||| Sbjct: 126710 acacacacacgcacgcaacacaca 126733
>gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0486C01, complete sequence Length = 146432 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 53789 gagaggaggccaagaacaag 53770
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 catcatcgacggcatcggcg 246 |||||||||||||||||||| Sbjct: 2473899 catcatcgacggcatcggcg 2473918
>gb|AC164542.2| Mus musculus chromosome 3, clone RP23-391J12, complete sequence Length = 202319 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 acacacacactcacgcaacacaca 26 |||||||||||||| ||||||||| Sbjct: 30829 acacacacactcacacaacacaca 30852
>gb|AC073297.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-167N24, complete sequence Length = 96335 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 acacacacactcacgcaacacaca 26 |||||||||| ||||||||||||| Sbjct: 76373 acacacacacacacgcaacacaca 76396
>gb|AC091283.11| Mus musculus chromosome 18, clone RP23-146P1, complete sequence Length = 220804 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 acacacacactcacgcaacacaca 26 ||||||||||||| |||||||||| Sbjct: 116370 acacacacactcatgcaacacaca 116393
>ref|XM_752573.1| Ustilago maydis 521 hypothetical protein (UM01519.1) partial mRNA Length = 5133 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 aggcggagctggagcagtgg 353 |||||||||||||||||||| Sbjct: 2840 aggcggagctggagcagtgg 2859
>ref|XM_755485.1| Ustilago maydis 521 hypothetical protein (UM04431.1) partial mRNA Length = 5223 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 gaggaggccaagaacaagat 112 |||||||||||||||||||| Sbjct: 4795 gaggaggccaagaacaagat 4814
>gb|AC102769.11| Mus musculus chromosome 17, clone RP23-89A3, complete sequence Length = 162417 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 acacacacactcacgcaacacaca 26 |||||||||||||| ||||||||| Sbjct: 104565 acacacacactcacacaacacaca 104542
>gb|AC128665.4| Mus musculus BAC clone RP24-141K21 from chromosome 18, complete sequence Length = 183285 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 acacacacactcacgcaacacaca 26 ||||||||||||| |||||||||| Sbjct: 46750 acacacacactcatgcaacacaca 46773
>emb|Z74038.1|CEF58B4 Caenorhabditis elegans Cosmid F58B4, complete sequence Length = 23861 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 acacacacactcacgcaacacaca 26 |||||||||||||| ||||||||| Sbjct: 14432 acacacacactcactcaacacaca 14455
>gb|AC126550.3| Mus musculus BAC clone RP24-405L5 from chromosome 17, complete sequence Length = 171820 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 acacacacactcacgcaacacaca 26 |||||||||||||| ||||||||| Sbjct: 78034 acacacacactcacacaacacaca 78011
>gb|AC124742.4| Mus musculus BAC clone RP23-210N16 from 12, complete sequence Length = 208101 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 acacacacactcacgcaacacaca 26 |||||||||||||| ||||||||| Sbjct: 170474 acacacacactcacacaacacaca 170451
>gb|AC126260.3| Mus musculus BAC clone RP23-338J1 from chromosome 9, complete sequence Length = 208028 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 tccatcttcactgaaaagtgaaaa 50 ||||||||||| |||||||||||| Sbjct: 15168 tccatcttcaccgaaaagtgaaaa 15191
>gb|AC079218.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-382G13, complete sequence Length = 142667 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 acacacacactcacgcaacacaca 26 |||||||||| ||||||||||||| Sbjct: 3010 acacacacacacacgcaacacaca 3033
>gb|AC100752.10| Mus musculus chromosome 3, clone RP23-2A4, complete sequence Length = 208757 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 acacacacactcacgcaacacaca 26 |||||||||||||| ||||||||| Sbjct: 174011 acacacacactcacacaacacaca 174034
>gb|AC125452.7| Mus musculus, clone RP23-43F6, complete sequence Length = 162045 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 acacacacactcacgcaacacaca 26 |||||||||||||| ||||||||| Sbjct: 43691 acacacacactcacacaacacaca 43714
>emb|AL450307.18| Human DNA sequence from clone RP11-245K15 on chromosome 10, complete sequence Length = 159020 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 acacacacactcacgcaacacaca 26 |||||||||| ||||||||||||| Sbjct: 57869 acacacacacacacgcaacacaca 57846
>emb|AL449104.5| Human DNA sequence from clone RP1-173P22 on chromosome 6 Contains the 3' end of the HCRTR2 gene for hypocretin (orexin) receptor 2, complete sequence Length = 120466 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 acacacacactcacgcaacacaca 26 |||||||||| ||||||||||||| Sbjct: 65201 acacacacacacacgcaacacaca 65224
>gb|AC091536.2| Rattus norvegicus strain Brown Norway clone RP31-547A5, complete sequence Length = 175512 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 acacacacactcacgcaacacaca 26 |||||||||||||| ||||||||| Sbjct: 1069 acacacacactcacacaacacaca 1046 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 acacacacactcacgcaacacaca 26 |||||||||||||| ||||||||| Sbjct: 1034 acacacacactcacacaacacaca 1011 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 acacacacactcacgcaacacaca 26 |||||||||||||| ||||||||| Sbjct: 605 acacacacactcacacaacacaca 582 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 acacacacactcacgcaacacaca 26 |||||||||||||| ||||||||| Sbjct: 552 acacacacactcacacaacacaca 529
>gb|AC091617.2| Rattus norvegicus strain Brown Norway clone RP31-371K3, complete sequence Length = 150494 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 acacacacactcacgcaacacaca 26 |||||||||||||| ||||||||| Sbjct: 150457 acacacacactcacacaacacaca 150434 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 acacacacactcacgcaacacaca 26 |||||||||||||| ||||||||| Sbjct: 150422 acacacacactcacacaacacaca 150399 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 acacacacactcacgcaacacaca 26 |||||||||||||| ||||||||| Sbjct: 149993 acacacacactcacacaacacaca 149970 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 acacacacactcacgcaacacaca 26 |||||||||||||| ||||||||| Sbjct: 149940 acacacacactcacacaacacaca 149917
>emb|AL109620.5|HSBG54N10 Human DNA sequence from clone GS1-54N10 on chromosome Xq26.3-28, complete sequence Length = 113148 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 acacacacactcacgcaacacaca 26 |||||||||| ||||||||||||| Sbjct: 34906 acacacacacacacgcaacacaca 34883
>emb|Y10165.2|CPPG12 Claviceps purpurea pg1 gene for polygalacturonase & pg2 gene for polygalacturonase Length = 4777 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 acacacacactcacgcaacacaca 26 |||||||||| ||||||||||||| Sbjct: 640 acacacacacacacgcaacacaca 663
>emb|AL645527.20| Mouse DNA sequence from clone RP23-26L6 on chromosome 11 Contains the Vamp2 gene for vesicle-associated membrane 2, the Per1 gene for period homolog 1 (Drosophila), the Hes7 gene for hairy and enhancer of split 7 (Drosophila), the Aloxe3 gene for arachidonate lipoxygenase 3, the Alox12b gene for arachidonate 12-lipoxygenase 12R type, the Alox15b gene for arachidonate 15-lipoxygenase second type, the Gucy2e gene for guanylate cyclase 2e, a novel gene, the gene for LYST-interacting protein LIP8 (Lip8-pending), the gene for the likely ortholog of H. sapiens trafficking protein particle complex 1 (TRAPPC1)), the Kcnab3 gene for potassium voltage-gated channel shaker-related subfamily beta member 3, a novel gene, the 3' end of the Chd3 gene for chromodomain helicase DNA binding protein 3 and six CpG islands, complete sequence Length = 261224 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 acacacacactcacgcaacacaca 26 |||||||||| ||||||||||||| Sbjct: 3444 acacacacacacacgcaacacaca 3421
>gb|AC164159.2| Mus musculus BAC clone RP23-339C17 from chromosome 17, complete sequence Length = 206481 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 acacacacactcacgcaacacaca 26 |||||||||||||| ||||||||| Sbjct: 159833 acacacacactcacacaacacaca 159856
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 catcatcgacggcatcggcg 246 |||||||||||||||||||| Sbjct: 653887 catcatcgacggcatcggcg 653906
>emb|AL606634.2|OSJN00066 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0072N21, complete sequence Length = 130433 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 126301 gagaggaggccaagaacaag 126282
>gb|AC159897.2| Mus musculus BAC clone RP23-191E14 from chromosome 12, complete sequence Length = 216485 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 acacacacactcacgcaacacaca 26 |||||||||||||| ||||||||| Sbjct: 11962 acacacacactcacacaacacaca 11939
>gb|AC144518.32| Pan troglodytes clone rp43-23c18, complete sequence Length = 186577 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 acacacacactcacgcaacacaca 26 |||||||||||||| ||||||||| Sbjct: 48094 acacacacactcacacaacacaca 48071
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 216 ttcggcgccaccatcatcgacggcatcggcga 247 |||| |||||||||||||| |||| ||||||| Sbjct: 1835833 ttcgccgccaccatcatcggcggcttcggcga 1835864
>gb|AC069405.6| Drosophila melanogaster 3L BAC RP98-17J20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167638 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 acacacacactcacgcaacacaca 26 |||||||||||| ||||||||||| Sbjct: 65385 acacacacactctcgcaacacaca 65362
>gb|AC087321.20| Homo sapiens 12 BAC RP11-606D9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 123010 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 acacacacactcacgcaacacaca 26 |||||||||| ||||||||||||| Sbjct: 75334 acacacacacacacgcaacacaca 75357
>gb|AC092388.5| Oryza sativa chromosome 10 BAC OSJNBa0011L09 genomic sequence, complete sequence Length = 177565 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 85112 gagaggaggccaagaacaag 85093
>dbj|AB189152.1| Hordeum vulgare GA3ox mRNA for gibberellin 3beta-hydroxylase, complete cds Length = 1332 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 gtgccgggcgccatcgtcgtcaac 455 |||||||||||||| ||||||||| Sbjct: 918 gtgccgggcgccatggtcgtcaac 941
>gb|AY062031.1| Homo sapiens hypocretin receptor 2 (HCRTR2) gene, complete cds Length = 168575 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 acacacacactcacgcaacacaca 26 |||||||||| ||||||||||||| Sbjct: 99821 acacacacacacacgcaacacaca 99844
>gb|DQ099347.1| Bombus lucorum clone BL16 microsatellite sequence Length = 276 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 acacacacactcacgcaacacaca 26 |||||||||| ||||||||||||| Sbjct: 133 acacacacacacacgcaacacaca 110
>gb|AC110377.5| Mus musculus BAC clone RP23-460A13 from chromosome 12, complete sequence Length = 196540 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 acacacacactcacgcaacacaca 26 |||||||||| ||||||||||||| Sbjct: 73995 acacacacacgcacgcaacacaca 74018 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 acacacacactcacgcaacacaca 26 |||||||||| ||||||||||||| Sbjct: 73958 acacacacacacacgcaacacaca 73981
>gb|AC159378.8| Mus musculus 10 BAC RP23-199N18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 202745 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 gaggagaggaggccaagaac 107 |||||||||||||||||||| Sbjct: 139186 gaggagaggaggccaagaac 139205
>gb|AC154491.2| Mus musculus BAC clone RP24-106D8 from chromosome 17, complete sequence Length = 146960 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 acacacacactcacgcaacacaca 26 |||||||||||||| ||||||||| Sbjct: 138931 acacacacactcacacaacacaca 138908
>emb|BX324142.7| Zebrafish DNA sequence from clone CH211-196F19 in linkage group 20, complete sequence Length = 177066 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 acacacacactcacgcaacacaca 26 |||||||||||||| ||||||||| Sbjct: 13047 acacacacactcacacaacacaca 13024
>gb|AC026464.7| Homo sapiens chromosome 16 clone RP11-343C2, complete sequence Length = 190185 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 acacacacactcacgcaacacaca 26 |||||||||| ||||||||||||| Sbjct: 165879 acacacacacacacgcaacacaca 165856
>gb|AC135355.3| Mus musculus BAC clone RP24-495F22 from chromosome 6, complete sequence Length = 171057 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 acacacacactcacgcaacacaca 26 |||||||||||||| ||||||||| Sbjct: 139869 acacacacactcacacaacacaca 139846
>gb|AC158596.7| Mus musculus 10 BAC RP23-188F7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207673 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 tgaaaagtgaaaaacagtgt 57 |||||||||||||||||||| Sbjct: 31614 tgaaaagtgaaaaacagtgt 31595
>gb|AC084404.8|AC084404 Oryza sativa chromosome 3 BAC OSJNBa0026A15 genomic sequence, complete sequence Length = 156929 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 57337 gagaggaggccaagaacaag 57356
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 8315788 gagaggaggccaagaacaag 8315769
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 11856616 gagaggaggccaagaacaag 11856597
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 12678450 gagaggaggccaagaacaag 12678469
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 9257767 gagaggaggccaagaacaag 9257786
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 12246668 gagaggaggccaagaacaag 12246687
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 23122014 gagaggaggccaagaacaag 23121995
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 gctccaccgccgtcgaccaa 302 |||||||||||||||||||| Sbjct: 7256294 gctccaccgccgtcgaccaa 7256313
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 27388692 gagaggaggccaagaacaag 27388711
>gb|AC004616.1| Homo sapiens X BAC GSHB-536K7 (Genome Systems Human BAC library) complete sequence Length = 149752 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 acacacacactcacgcaacacaca 26 |||||||||| ||||||||||||| Sbjct: 119758 acacacacacacacgcaacacaca 119735
>gb|AF234983.1|AF234983 Phaseolus vulgaris lipoxygenase gene, complete cds Length = 4083 Score = 40.1 bits (20), Expect = 6.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 177 gtggtgctcatgcgcaagaacgtgctggacctcaac 212 |||||||| ||||||||||| ||| ||||| ||||| Sbjct: 73 gtggtgctgatgcgcaagaatgtgttggacttcaac 108
>gb|AC009953.4| Homo sapiens BAC clone RP11-193F16 from 2, complete sequence Length = 160810 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 29 catcttcactgaaaagtgaaaaacagtg 56 ||||||||||||||| || ||||||||| Sbjct: 99888 catcttcactgaaaactgtaaaacagtg 99915
>dbj|AP004194.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0014E08 Length = 144219 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 71587 gagaggaggccaagaacaag 71606
>dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0063G05 Length = 182681 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 169209 gagaggaggccaagaacaag 169228
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 433 tgccgggcgccatcgtcgtc 452 |||||||||||||||||||| Sbjct: 4138868 tgccgggcgccatcgtcgtc 4138887
>dbj|AP005684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1742_G01 Length = 154912 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 83058 gagaggaggccaagaacaag 83077
>dbj|AP006556.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1010G04a Length = 61450 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 27331 gagaggaggccaagaacaag 27350
>dbj|AP005394.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0620H05 Length = 161808 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 gctccaccgccgtcgaccaa 302 |||||||||||||||||||| Sbjct: 156231 gctccaccgccgtcgaccaa 156250
>dbj|AP005756.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0035N08 Length = 136267 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 gctccaccgccgtcgaccaa 302 |||||||||||||||||||| Sbjct: 32102 gctccaccgccgtcgaccaa 32121
>dbj|AK070268.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044E14, full insert sequence Length = 773 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 acacactcacgcaacacaca 26 |||||||||||||||||||| Sbjct: 113 acacactcacgcaacacaca 94
>gb|AY726769.1| Myrmica scabrinodis clone Msca9 microsatellite sequence Length = 645 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 acacacacactcacgcaacacaca 26 |||||||||| ||||||||||||| Sbjct: 321 acacacacacacacgcaacacaca 344
>emb|AM236600.1| Fusarium oxysporum f. sp. lycopersici orx1 gene for putative oxidoreductase, exons 1-8 Length = 2254 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 cgccgtcgaccaagacaacggcgg 313 |||||||||||||| ||||||||| Sbjct: 875 cgccgtcgaccaagccaacggcgg 898
>gb|AC004168.2|AC004168 Homo sapiens chromosome 4 clone B159L21 map 4q25, complete sequence Length = 185566 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 acacacacactcacgcaacacaca 26 |||||||||||||| ||||||||| Sbjct: 18956 acacacacactcacacaacacaca 18979
>gb|AE003537.3| Drosophila melanogaster chromosome 3L, section 48 of 83 of the complete sequence Length = 282116 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 acacacacactcacgcaacacaca 26 |||||||||||| ||||||||||| Sbjct: 261097 acacacacactctcgcaacacaca 261074
>gb|AC115689.22| Mus musculus chromosome 9, clone RP23-166A9, complete sequence Length = 221548 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 27 tccatcttcactgaaaagtgaaaa 50 ||||||||||| |||||||||||| Sbjct: 93451 tccatcttcaccgaaaagtgaaaa 93428
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 catcatcgacggcatcggcg 246 |||||||||||||||||||| Sbjct: 2354751 catcatcgacggcatcggcg 2354732
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 caagggcacggtggtgctca 186 |||||||||||||||||||| Sbjct: 1464949 caagggcacggtggtgctca 1464930
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 12685790 gagaggaggccaagaacaag 12685809
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 11856287 gagaggaggccaagaacaag 11856268
>emb|AL731592.2|OSJN00242 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B17, complete sequence Length = 99093 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gagaggaggccaagaacaag 110 |||||||||||||||||||| Sbjct: 28356 gagaggaggccaagaacaag 28337
>gb|AC145568.4| Mus musculus BAC clone RP24-473H20 from 6, complete sequence Length = 201210 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 acacacacactcacgcaacacaca 26 |||||||||||||| ||||||||| Sbjct: 157604 acacacacactcacacaacacaca 157627
>emb|CT025641.10| Mouse DNA sequence from clone RP24-322A17 on chromosome 17, complete sequence Length = 122522 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 acacacacactcacgcaacacaca 26 |||||||||||||| ||||||||| Sbjct: 22523 acacacacactcacacaacacaca 22500
>gb|U42336.1|TAU42336 Triticum aestivum ACC synthase (TA-ACS2) gene, complete cds Length = 5590 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 gcggaggcggagctggagcagtgg 353 ||||||||||||||||||| |||| Sbjct: 2640 gcggaggcggagctggagctgtgg 2663
>emb|AL627122.18| Mouse DNA sequence from clone RP23-132E8 on chromosome 4, complete sequence Length = 166814 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 acacacacactcacgcaacacaca 26 |||||||||||||| ||||||||| Sbjct: 88133 acacacacactcacacaacacaca 88110
>gb|AC153955.3| Mus musculus 10 BAC RP24-167A12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 154271 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 tgaaaagtgaaaaacagtgt 57 |||||||||||||||||||| Sbjct: 70085 tgaaaagtgaaaaacagtgt 70104 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,389,427 Number of Sequences: 3902068 Number of extensions: 4389427 Number of successful extensions: 142754 Number of sequences better than 10.0: 140 Number of HSP's better than 10.0 without gapping: 144 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 140745 Number of HSP's gapped (non-prelim): 2000 length of query: 461 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 439 effective length of database: 17,147,199,772 effective search space: 7527620699908 effective search space used: 7527620699908 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)