ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl45d05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HUCE1_MOUSE (Q9DB85) Cerebral protein 1 homolog 29 4.6

>HUCE1_MOUSE (Q9DB85) Cerebral protein 1 homolog|
          Length = 457

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
 Frame = -1

Query: 373 FSTLHV*TKLKESSSEIHRHFPLTRAV-PMMPSPTTWT*LSIFSTTLRASSSQWHSPIVS 197
           +S+LH+   L      +H     T  + P  PSP + +  S  S TL  S  QW +   +
Sbjct: 140 YSSLHLTQPLDSVDQTVHNSRTSTATIDPSKPSPESMSPNS--SHTL--SRKQWRNRQKN 195

Query: 196 KRGSRRSERQMAA*DQPPPRHS 131
           KR  +   R +   +Q PP+ S
Sbjct: 196 KRRHKNKFRPLQTPEQAPPKAS 217


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,549,454
Number of Sequences: 219361
Number of extensions: 1187439
Number of successful extensions: 2977
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2976
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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