ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl45d05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK073183.1| Oryza sativa (japonica cultivar-group) cDNA clon... 252 8e-64
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 94 5e-16
3dbj|AP005885.3| Oryza sativa (japonica cultivar-group) genomic D... 94 5e-16
4emb|AJ005198.1|SAAJ5198 Streptomyces alboniger stgA, stgU and st... 44 0.39
5emb|AJ006517.1|SAN6517 Streptomyces anulatus stgA, stgU and stgR... 44 0.39
6emb|AL133173.20| Human DNA sequence from clone RP11-453N3 on chr... 42 1.5
7dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
8dbj|AP005679.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
9dbj|AP005577.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
10ref|XM_509746.1| PREDICTED: Pan troglodytes similar to Coagulati... 40 6.0
11gb|AC104932.22| Mus musculus chromosome 3, clone RP24-337A16, co... 40 6.0
12gb|AC102440.12| Mus musculus chromosome 1, clone RP24-146C18, co... 40 6.0
13gb|BC046125.1| Homo sapiens coagulation factor X, mRNA (cDNA clo... 40 6.0
14gb|BC040125.1| Homo sapiens coagulation factor X, mRNA (cDNA clo... 40 6.0
15ref|XM_590940.2| PREDICTED: Bos taurus similar to nuclear distri... 40 6.0
16ref|XM_878820.1| PREDICTED: Bos taurus similar to nuclear distri... 40 6.0
17ref|XM_878789.1| PREDICTED: Bos taurus similar to nuclear distri... 40 6.0
18ref|XM_878762.1| PREDICTED: Bos taurus similar to nuclear distri... 40 6.0
19gb|AC163092.4| Mus musculus chromosome 3, clone RP24-212F17, com... 40 6.0
20gb|AC122541.3| Mus musculus BAC clone RP24-567D4 from chromosome... 40 6.0
21emb|AL137002.19| Human DNA sequence from clone RP11-98F14 on chr... 40 6.0
22emb|AL035086.12|HS44A20 Human DNA sequence from clone RP1-44A20 ... 40 6.0
23ref|NM_000504.3| Homo sapiens coagulation factor X (F10), mRNA 40 6.0
24emb|CR623031.1| full-length cDNA clone CS0DB007YC01 of Neuroblas... 40 6.0
25emb|CR607773.1| full-length cDNA clone CS0DI076YA10 of Placenta ... 40 6.0
26emb|CR603372.1| full-length cDNA clone CS0DI020YH13 of Placenta ... 40 6.0
27gb|AF503510.1| Homo sapiens coagulation factor X (F10) gene, com... 40 6.0
28dbj|AK154041.1| Mus musculus 2 days neonate thymus thymic cells ... 40 6.0
29gb|N00045.1|HUMFX8 Homo sapiens factor X precursor (F10) gene, e... 40 6.0
30emb|AJ300478.1|LMA300478 Leptosphaeria maculans Tox+/A group LMR... 40 6.0
31gb|AC163765.3| Pan troglodytes BAC clone CH251-175G24 from chrom... 40 6.0
32gb|AC108676.8| Homo sapiens 3 BAC RP11-384A12 (Roswell Park Canc... 40 6.0
33dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 6.0
34gb|AY108329.1| Zea mays PCO128508 mRNA sequence 40 6.0
35gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence 40 6.0
36gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence 40 6.0
37gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 40 6.0
38gb|K03194.1|HUMFXM Human factor X mRNA, partial signal pept and ... 40 6.0
39gb|K01886.1|HUMFX Human factor X mRNA 40 6.0
40gb|M57285.1|HUMFACX Human coagulation factor X (F10) mRNA, compl... 40 6.0
41gb|M22613.1|HUMCFX Human blood-coagulation factor X mRNA, comple... 40 6.0
42emb|AL808146.3| Mouse DNA sequence from clone RP23-52L10 on chro... 40 6.0

>dbj|AK073183.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033009O22, full
           insert sequence
          Length = 2735

 Score =  252 bits (127), Expect = 8e-64
 Identities = 274/321 (85%), Gaps = 4/321 (1%)
 Strand = Plus / Plus

                                                                       
Query: 123 ctgggagcgctgtgccgcggcggaggctggtcctacgcggccatctggcgctccgaccgt 182
           ||||||||||| ||||||||||| || |||| |||||| || ||||||||||||||||||
Sbjct: 136 ctgggagcgctctgccgcggcgggggatggtgctacgccgcgatctggcgctccgaccgt 195

                                                                       
Query: 183 cgcgacccacgtttgctaacaattggagagtgccactgtgaagatgaagcccgaagagtt 242
           ||||||||||| ||||| || || || |||| |||| |||||||||   || |||  |||
Sbjct: 196 cgcgacccacggttgcttacgatcggtgagttccacagtgaagatggtaccagaaatgtt 255

                                                                       
Query: 243 gttgagaatatgcttaatcaagtccatgttgttggagaaggcatcatagggacagctcta 302
           |||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 256 gttgagaagatgcttaatcaggtccatgttgttggagaaggcatcatagggagagctcta 315

                                                                       
Query: 303 gtaagtgggaagtgccgatggatttccgatgatgattcctttagtttggttcagacatgc 362
           ||||||||  |||||| |||||||||   ||||   ||||||||||| |  |||||| | 
Sbjct: 316 gtaagtggagagtgccaatggatttc---tgatacctcctttagttttgcccagacaagt 372

                                                                       
Query: 363 aacgtagaaaacctaggcttatttcagggctatacttggtggcaacatcagttcatgagc 422
            | | ||| |||| || ||||||||||||||||||||||||||| ||||||||| || | 
Sbjct: 373 gatgcagataaccaagacttatttcagggctatacttggtggcagcatcagttcctgtgt 432

                                
Query: 423 gg-ataaagactattgcagta 442
           || ||||||||||||||||||
Sbjct: 433 ggaataaagactattgcagta 453



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 65/71 (91%)
 Strand = Plus / Plus

                                                                            
Query: 123      ctgggagcgctgtgccgcggcggaggctggtcctacgcggccatctggcgctccgaccgt 182
                ||||||||||| ||||||||||| || |||| |||||| || ||||||||||||||||||
Sbjct: 27435184 ctgggagcgctctgccgcggcgggggatggtgctacgccgcgatctggcgctccgaccgt 27435243

                           
Query: 183      cgcgacccacg 193
                |||||||||||
Sbjct: 27435244 cgcgacccacg 27435254



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 42/44 (95%)
 Strand = Plus / Plus

                                                            
Query: 240      gttgttgagaatatgcttaatcaagtccatgttgttggagaagg 283
                ||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 27436394 gttgttgagaagatgcttaatcaggtccatgttgttggagaagg 27436437



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                              
Query: 283      gcatcatagggacagctctagtaagtgggaagtgccgatggatttc 328
                |||||||||||| |||||||||||||||  |||||| |||||||||
Sbjct: 27436763 gcatcatagggagagctctagtaagtggagagtgccaatggatttc 27436808



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 388      agggctatacttggtggcaacatcagttc 416
                ||||||||||||||||||| |||||||||
Sbjct: 27437137 agggctatacttggtggcagcatcagttc 27437165



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>dbj|AP005885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0657H12
          Length = 142688

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 65/71 (91%)
 Strand = Plus / Plus

                                                                         
Query: 123   ctgggagcgctgtgccgcggcggaggctggtcctacgcggccatctggcgctccgaccgt 182
             ||||||||||| ||||||||||| || |||| |||||| || ||||||||||||||||||
Sbjct: 26906 ctgggagcgctctgccgcggcgggggatggtgctacgccgcgatctggcgctccgaccgt 26965

                        
Query: 183   cgcgacccacg 193
             |||||||||||
Sbjct: 26966 cgcgacccacg 26976



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 42/44 (95%)
 Strand = Plus / Plus

                                                         
Query: 240   gttgttgagaatatgcttaatcaagtccatgttgttggagaagg 283
             ||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 28116 gttgttgagaagatgcttaatcaggtccatgttgttggagaagg 28159



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                           
Query: 283   gcatcatagggacagctctagtaagtgggaagtgccgatggatttc 328
             |||||||||||| |||||||||||||||  |||||| |||||||||
Sbjct: 28485 gcatcatagggagagctctagtaagtggagagtgccaatggatttc 28530



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 388   agggctatacttggtggcaacatcagttc 416
             ||||||||||||||||||| |||||||||
Sbjct: 28859 agggctatacttggtggcagcatcagttc 28887



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>emb|AJ005198.1|SAAJ5198 Streptomyces alboniger stgA, stgU and stgR genes
          Length = 3240

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 44   ccccgcccgcggcggcgtacgt 65
            ||||||||||||||||||||||
Sbjct: 1690 ccccgcccgcggcggcgtacgt 1711



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>emb|AJ006517.1|SAN6517 Streptomyces anulatus stgA, stgU and stgR genes
          Length = 3240

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 44   ccccgcccgcggcggcgtacgt 65
            ||||||||||||||||||||||
Sbjct: 1690 ccccgcccgcggcggcgtacgt 1711



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>emb|AL133173.20| Human DNA sequence from clone RP11-453N3 on chromosome 10 Contains a RING
              finger protein 18 (RNF18) pseudogene, an actin-related
              protein 3 homolog (yeast) (ACTR3) pseudogene, a poly(A)
              cytoplasmic binding protein 3 (PABPC3) pseudogene, a gene
              for a novel protein similar to ATP-binding cassette
              sub-family D (ALD) member 1 (ABCD1), two novel genes and
              two CpG islands, complete sequence
          Length = 206192

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 329    cgatgatgattcctttagttt 349
              |||||||||||||||||||||
Sbjct: 199045 cgatgatgattcctttagttt 199065



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 35       cctcctgctccccgcccgcggcggcgtac 63
                |||||| ||||||||| ||||||||||||
Sbjct: 21399761 cctcctcctccccgccggcggcggcgtac 21399789



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 20       acaccacaccgccctcctcct 40
                |||||||||||||||||||||
Sbjct: 13844067 acaccacaccgccctcctcct 13844047



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>dbj|AP005679.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1210_A07
          Length = 131394

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 35    cctcctgctccccgcccgcggcggcgtac 63
             |||||| ||||||||| ||||||||||||
Sbjct: 16866 cctcctcctccccgccggcggcggcgtac 16894



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>dbj|AP005577.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1655_B12
          Length = 132736

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 20    acaccacaccgccctcctcct 40
             |||||||||||||||||||||
Sbjct: 93551 acaccacaccgccctcctcct 93531



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>ref|XM_509746.1| PREDICTED: Pan troglodytes similar to Coagulation factor X
           precursor (Stuart factor) (Stuart-Prower factor)
           (LOC452679), mRNA
          Length = 1225

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 26  caccgccctcctcctgctcc 45
           ||||||||||||||||||||
Sbjct: 917 caccgccctcctcctgctcc 898



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>gb|AC104932.22| Mus musculus chromosome 3, clone RP24-337A16, complete sequence
          Length = 184718

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     gctccccgcccgcggcggcg 60
              ||||||||||||||||||||
Sbjct: 116129 gctccccgcccgcggcggcg 116110



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>gb|AC102440.12| Mus musculus chromosome 1, clone RP24-146C18, complete sequence
          Length = 144770

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 210    gagtgccactgtgaagatgaagcc 233
              ||||| ||||||||||||||||||
Sbjct: 124193 gagtgacactgtgaagatgaagcc 124216



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>gb|BC046125.1| Homo sapiens coagulation factor X, mRNA (cDNA clone MGC:57588
           IMAGE:5723510), complete cds
          Length = 1541

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 26  caccgccctcctcctgctcc 45
           ||||||||||||||||||||
Sbjct: 936 caccgccctcctcctgctcc 917



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>gb|BC040125.1| Homo sapiens coagulation factor X, mRNA (cDNA clone IMAGE:5764698),
           partial cds
          Length = 1573

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 26  caccgccctcctcctgctcc 45
           ||||||||||||||||||||
Sbjct: 902 caccgccctcctcctgctcc 883



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>ref|XM_590940.2| PREDICTED: Bos taurus similar to nuclear distribution gene C
           homolog (A. nidulans), transcript variant 1 (LOC513277),
           mRNA
          Length = 1315

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 32  cctcctcctgctccccgccc 51
           ||||||||||||||||||||
Sbjct: 120 cctcctcctgctccccgccc 101



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>ref|XM_878820.1| PREDICTED: Bos taurus similar to nuclear distribution gene C
           homolog (A. nidulans), transcript variant 5 (LOC513277),
           mRNA
          Length = 1329

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 32  cctcctcctgctccccgccc 51
           ||||||||||||||||||||
Sbjct: 116 cctcctcctgctccccgccc 97



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>ref|XM_878789.1| PREDICTED: Bos taurus similar to nuclear distribution gene C
           homolog (A. nidulans), transcript variant 4 (LOC513277),
           mRNA
          Length = 1311

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 32  cctcctcctgctccccgccc 51
           ||||||||||||||||||||
Sbjct: 116 cctcctcctgctccccgccc 97



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>ref|XM_878762.1| PREDICTED: Bos taurus similar to nuclear distribution gene C
           homolog (A. nidulans), transcript variant 3 (LOC513277),
           mRNA
          Length = 1227

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 32  cctcctcctgctccccgccc 51
           ||||||||||||||||||||
Sbjct: 116 cctcctcctgctccccgccc 97



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>gb|AC163092.4| Mus musculus chromosome 3, clone RP24-212F17, complete sequence
          Length = 150636

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 41   gctccccgcccgcggcggcg 60
            ||||||||||||||||||||
Sbjct: 8720 gctccccgcccgcggcggcg 8701



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>gb|AC122541.3| Mus musculus BAC clone RP24-567D4 from chromosome 5, complete sequence
          Length = 166883

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 19    cacaccacaccgccctcctcctgc 42
             |||||||||| |||||||||||||
Sbjct: 64448 cacaccacactgccctcctcctgc 64471



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>emb|AL137002.19| Human DNA sequence from clone RP11-98F14 on chromosome 13q22.1-31.1
             Contains the 3' end of the MCF2L gene for MCF.2 cell line
             derived transforming sequence-like, the F7 gene for
             coagulation factor VII (serum prothrombin conversion
             accelerator), the F10 gene for coagulation factor X, a
             lysyl-tRNA synthetase (KARS) pseudogene, the PROZ gene for
             protein Z, vitamin K-dependent plasma glycoprotein (PZ),
             the 3' end of a novel gene (FLJ11305) and six CpG islands,
             complete sequence
          Length = 132933

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    caccgccctcctcctgctcc 45
             ||||||||||||||||||||
Sbjct: 73591 caccgccctcctcctgctcc 73572



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>emb|AL035086.12|HS44A20 Human DNA sequence from clone RP1-44A20 on chromosome 6q23.1-24.3
             Contains part of the gene for a novel protein similar to
             C1-tetrahydrofolate synthases (contains DKFZP586G1517
             protein and FLJ21145, contains a tetrahydrofolate
             dehydrogenase/cyclohydrolase domain), part of a novel gene
             (contains FLJ31738 and KIAA1209) and a novel pseudogene
             similar to phosducin-like proteins. Contains a CpG island,
             complete sequence
          Length = 165090

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 28    ccgccctcctcctgctccccgccc 51
             |||||||||||||||||| |||||
Sbjct: 57965 ccgccctcctcctgctcctcgccc 57988



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>ref|NM_000504.3| Homo sapiens coagulation factor X (F10), mRNA
          Length = 1560

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 26  caccgccctcctcctgctcc 45
           ||||||||||||||||||||
Sbjct: 955 caccgccctcctcctgctcc 936



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>emb|CR623031.1| full-length cDNA clone CS0DB007YC01 of Neuroblastoma Cot
           10-normalized of Homo sapiens (human)
          Length = 1434

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 26  caccgccctcctcctgctcc 45
           ||||||||||||||||||||
Sbjct: 927 caccgccctcctcctgctcc 908



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>emb|CR607773.1| full-length cDNA clone CS0DI076YA10 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1467

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 26  caccgccctcctcctgctcc 45
           ||||||||||||||||||||
Sbjct: 937 caccgccctcctcctgctcc 918



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>emb|CR603372.1| full-length cDNA clone CS0DI020YH13 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1450

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 26  caccgccctcctcctgctcc 45
           ||||||||||||||||||||
Sbjct: 936 caccgccctcctcctgctcc 917



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>gb|AF503510.1| Homo sapiens coagulation factor X (F10) gene, complete cds
          Length = 29488

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    caccgccctcctcctgctcc 45
             ||||||||||||||||||||
Sbjct: 27767 caccgccctcctcctgctcc 27748



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>dbj|AK154041.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
          full-length enriched library, clone:E430027H20
          product:forkhead box O1, full insert sequence
          Length = 2532

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 41 gctccccgcccgcggcggcg 60
          ||||||||||||||||||||
Sbjct: 40 gctccccgcccgcggcggcg 21



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>gb|N00045.1|HUMFX8 Homo sapiens factor X precursor (F10) gene, exon 8 and complete
          cds
          Length = 624

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 26 caccgccctcctcctgctcc 45
          ||||||||||||||||||||
Sbjct: 45 caccgccctcctcctgctcc 26



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>emb|AJ300478.1|LMA300478 Leptosphaeria maculans Tox+/A group LMR repeat region, Smex-2
          marker
          Length = 1960

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 26 caccgccctcctcctgctcc 45
          ||||||||||||||||||||
Sbjct: 31 caccgccctcctcctgctcc 12



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>gb|AC163765.3| Pan troglodytes BAC clone CH251-175G24 from chromosome unknown, complete
              sequence
          Length = 196942

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     caccgccctcctcctgctcc 45
              ||||||||||||||||||||
Sbjct: 173741 caccgccctcctcctgctcc 173760



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>gb|AC108676.8| Homo sapiens 3 BAC RP11-384A12 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 90502

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 33    ctcctcctgctccccgcccgcggcggcg 60
             |||||||| |||| ||||||||||||||
Sbjct: 29213 ctcctcctcctccgcgcccgcggcggcg 29186



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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 122     tctgggagcgctgtgccgcg 141
               ||||||||||||||||||||
Sbjct: 2720539 tctgggagcgctgtgccgcg 2720558



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>gb|AY108329.1| Zea mays PCO128508 mRNA sequence
          Length = 920

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  cctcggtccctccctcggtc 109
           ||||||||||||||||||||
Sbjct: 4   cctcggtccctccctcggtc 23



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>gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence
          Length = 405672

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 90     cctcggtccctccctcggtc 109
              ||||||||||||||||||||
Sbjct: 213731 cctcggtccctccctcggtc 213750



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>gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence
          Length = 323584

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 90     cctcggtccctccctcggtc 109
              ||||||||||||||||||||
Sbjct: 201670 cctcggtccctccctcggtc 201689



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>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 325     tttccgatgatgattccttt 344
               ||||||||||||||||||||
Sbjct: 4240340 tttccgatgatgattccttt 4240359



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>gb|K03194.1|HUMFXM Human factor X mRNA, partial signal pept and complete mature pept
           cds
          Length = 1443

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 26  caccgccctcctcctgctcc 45
           ||||||||||||||||||||
Sbjct: 864 caccgccctcctcctgctcc 845



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>gb|K01886.1|HUMFX Human factor X mRNA
          Length = 1126

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 26  caccgccctcctcctgctcc 45
           ||||||||||||||||||||
Sbjct: 547 caccgccctcctcctgctcc 528



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>gb|M57285.1|HUMFACX Human coagulation factor X (F10) mRNA, complete cds
          Length = 1507

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 26  caccgccctcctcctgctcc 45
           ||||||||||||||||||||
Sbjct: 898 caccgccctcctcctgctcc 879



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>gb|M22613.1|HUMCFX Human blood-coagulation factor X mRNA, complete cds
          Length = 1414

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 26  caccgccctcctcctgctcc 45
           ||||||||||||||||||||
Sbjct: 835 caccgccctcctcctgctcc 816



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>emb|AL808146.3| Mouse DNA sequence from clone RP23-52L10 on chromosome X, complete
              sequence
          Length = 159820

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 28     ccgccctcctcctgctccccgccc 51
              ||||||||||||| ||||||||||
Sbjct: 126896 ccgccctcctcctcctccccgccc 126873


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,429,969
Number of Sequences: 3902068
Number of extensions: 3429969
Number of successful extensions: 74362
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74151
Number of HSP's gapped (non-prelim): 209
length of query: 448
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 426
effective length of database: 17,147,199,772
effective search space: 7304707102872
effective search space used: 7304707102872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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