ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl45d03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_469360.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3534 Score = 174 bits (88), Expect = 1e-40 Identities = 181/212 (85%) Strand = Plus / Plus Query: 200 agagcgggagcggaaactgaagaaagagcagaaggcaagagagaaggaggagaaaaagct 259 ||||| ||||||||| ||||||||||| |||||||||| |||||| ||||| |||| ||| Sbjct: 48 agagctggagcggaagctgaagaaagatcagaaggcaaaagagaaagaggaaaaaaggct 107 Query: 260 caaggcaaagcaaaaggaggctgccaggcttcaggctcaagcaacttctgatggacctaa 319 ||||| ||| ||||||||| || ||||| ||||| |||||| |||| ||||||||||| Sbjct: 108 taaggcgaaggcaaaggaggcggctaggctccaggcacaagcagcttcagatggacctaa 167 Query: 320 gaaaagtgagaagaagcaaaagaagaaggctgcggatgatgaaaaccccgaagatttcat 379 |||||| ||||||||||||| |||||| |||| ||| ||||| || || || |||||||| Sbjct: 168 gaaaagcgagaagaagcaaaggaagaaagctgtggaggatgagaatcctgaggatttcat 227 Query: 380 tgatcctgagacccctagtgggcagaagaaat 411 |||||| || || ||| |||||||||||||| Sbjct: 228 tgatccagacactcctcatgggcagaagaaat 259
>dbj|AK121157.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079F18, full insert sequence Length = 3587 Score = 174 bits (88), Expect = 1e-40 Identities = 181/212 (85%) Strand = Plus / Plus Query: 200 agagcgggagcggaaactgaagaaagagcagaaggcaagagagaaggaggagaaaaagct 259 ||||| ||||||||| ||||||||||| |||||||||| |||||| ||||| |||| ||| Sbjct: 261 agagctggagcggaagctgaagaaagatcagaaggcaaaagagaaagaggaaaaaaggct 320 Query: 260 caaggcaaagcaaaaggaggctgccaggcttcaggctcaagcaacttctgatggacctaa 319 ||||| ||| ||||||||| || ||||| ||||| |||||| |||| ||||||||||| Sbjct: 321 taaggcgaaggcaaaggaggcggctaggctccaggcacaagcagcttcagatggacctaa 380 Query: 320 gaaaagtgagaagaagcaaaagaagaaggctgcggatgatgaaaaccccgaagatttcat 379 |||||| ||||||||||||| |||||| |||| ||| ||||| || || || |||||||| Sbjct: 381 gaaaagcgagaagaagcaaaggaagaaagctgtggaggatgagaatcctgaggatttcat 440 Query: 380 tgatcctgagacccctagtgggcagaagaaat 411 |||||| || || ||| |||||||||||||| Sbjct: 441 tgatccagacactcctcatgggcagaagaaat 472
>dbj|AK066973.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089D01, full insert sequence Length = 4411 Score = 115 bits (58), Expect = 1e-22 Identities = 155/186 (83%), Gaps = 6/186 (3%) Strand = Plus / Plus Query: 232 aggcaagagagaaggaggagaaaaagctcaaggcaaag-caaa-----aggaggctgcca 285 |||||| |||||| ||||| |||||||||||||||||| |||| ||||||| || | Sbjct: 1181 aggcaaaagagaaagaggaaaaaaagctcaaggcaaaggcaaaggcaaaggaggcagcta 1240 Query: 286 ggcttcaggctcaagcaacttctgatggacctaagaaaagtgagaagaagcaaaagaaga 345 |||| ||||| |||||| |||| ||||| ||||| ||||||||||||||||||| ||||| Sbjct: 1241 ggctccaggcacaagcagcttcagatggtcctaaaaaaagtgagaagaagcaaaggaaga 1300 Query: 346 aggctgcggatgatgaaaaccccgaagatttcattgatcctgagacccctagtgggcaga 405 | |||| || ||||| || || || |||||||||||||| || || ||| |||||||| Sbjct: 1301 aagctgttgaggatgagaatcctgaggatttcattgatccagacactcctcatgggcaga 1360 Query: 406 agaaat 411 |||||| Sbjct: 1361 agaaat 1366
>ref|NM_197253.1| Oryza sativa (japonica cultivar-group) putative valyl tRNA synthetase (OSJNBa0062C05.27), mRNA Length = 3171 Score = 111 bits (56), Expect = 2e-21 Identities = 116/136 (85%) Strand = Plus / Plus Query: 211 ggaaactgaagaaagagcagaaggcaagagagaaggaggagaaaaagctcaaggcaaagc 270 |||| ||||||||||| |||||||||||||||||||||||||| | ||||||||| |||| Sbjct: 35 ggaagctgaagaaagatcagaaggcaagagagaaggaggagaagaggctcaaggcgaagc 94 Query: 271 aaaaggaggctgccaggcttcaggctcaagcaacttctgatggacctaagaaaagtgaga 330 |||||||||| ||||| ||||| |||||| | ||||||| | | ||||| || || | Sbjct: 95 aaaaggaggcgattaggctacaggcacaagcagcatctgatgaaacaaagaagagcgaca 154 Query: 331 agaagcaaaagaagaa 346 |||| ||||||||||| Sbjct: 155 agaaacaaaagaagaa 170
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 103 bits (52), Expect = 4e-19 Identities = 103/120 (85%) Strand = Plus / Plus Query: 292 aggctcaagcaacttctgatggacctaagaaaagtgagaagaagcaaaagaagaaggctg 351 |||| |||||| |||| ||||||||||||||||| ||||||||||||| |||||| |||| Sbjct: 27536308 aggcacaagcagcttcagatggacctaagaaaagcgagaagaagcaaaggaagaaagctg 27536367 Query: 352 cggatgatgaaaaccccgaagatttcattgatcctgagacccctagtgggcagaagaaat 411 ||| ||||| || || || |||||||||||||| || || ||| |||||||||||||| Sbjct: 27536368 tggaggatgagaatcctgaggatttcattgatccagacactcctcatgggcagaagaaat 27536427 Score = 87.7 bits (44), Expect = 3e-14 Identities = 101/120 (84%) Strand = Plus / Plus Query: 292 aggctcaagcaacttctgatggacctaagaaaagtgagaagaagcaaaagaagaaggctg 351 |||| |||||| |||| ||||| ||||| ||||||||||||||||||| |||||| |||| Sbjct: 645973 aggcacaagcagcttcagatggtcctaaaaaaagtgagaagaagcaaaggaagaaagctg 646032 Query: 352 cggatgatgaaaaccccgaagatttcattgatcctgagacccctagtgggcagaagaaat 411 || ||||| || || || |||||||||||||| || || ||| |||||||||||||| Sbjct: 646033 ttgaggatgagaatcctgaggatttcattgatccagacactcctcatgggcagaagaaat 646092 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 232 aggcaagagagaaggaggagaaaaagctcaaggcaaag 269 |||||| |||||| ||||| |||||||||||||||||| Sbjct: 645791 aggcaaaagagaaagaggaaaaaaagctcaaggcaaag 645828 Score = 46.1 bits (23), Expect = 0.090 Identities = 32/35 (91%) Strand = Plus / Plus Query: 200 agagcgggagcggaaactgaagaaagagcagaagg 234 ||||| ||||||||| ||||||||||| ||||||| Sbjct: 27535917 agagctggagcggaagctgaagaaagatcagaagg 27535951 Score = 46.1 bits (23), Expect = 0.090 Identities = 53/63 (84%) Strand = Plus / Minus Query: 348 gctgcggatgatgaaaaccccgaagatttcattgatcctgagacccctagtgggcagaag 407 |||| ||| |||||||| || |||||||| ||||||| || || |||| |||||||||| Sbjct: 12403432 gctgtggaggatgaaaatcctgaagattttattgatcaagacactcctaatgggcagaag 12403373 Query: 408 aaa 410 ||| Sbjct: 12403372 aaa 12403370 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 aagcaacttctgatggacct 317 |||||||||||||||||||| Sbjct: 15306711 aagcaacttctgatggacct 15306692 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 324 agtgagaagaagcaaaagaagaag 347 |||||||||||| ||||||||||| Sbjct: 14385631 agtgagaagaagaaaaagaagaag 14385654
>gb|AC137998.2| Oryza sativa chromosome 3 BAC OSJNBa0010B01 genomic sequence, complete sequence Length = 27470 Score = 103 bits (52), Expect = 4e-19 Identities = 103/120 (85%) Strand = Plus / Minus Query: 292 aggctcaagcaacttctgatggacctaagaaaagtgagaagaagcaaaagaagaaggctg 351 |||| |||||| |||| ||||||||||||||||| ||||||||||||| |||||| |||| Sbjct: 26466 aggcacaagcagcttcagatggacctaagaaaagcgagaagaagcaaaggaagaaagctg 26407 Query: 352 cggatgatgaaaaccccgaagatttcattgatcctgagacccctagtgggcagaagaaat 411 ||| ||||| || || || |||||||||||||| || || ||| |||||||||||||| Sbjct: 26406 tggaggatgagaatcctgaggatttcattgatccagacactcctcatgggcagaagaaat 26347 Score = 46.1 bits (23), Expect = 0.090 Identities = 32/35 (91%) Strand = Plus / Minus Query: 200 agagcgggagcggaaactgaagaaagagcagaagg 234 ||||| ||||||||| ||||||||||| ||||||| Sbjct: 26857 agagctggagcggaagctgaagaaagatcagaagg 26823
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 103 bits (52), Expect = 4e-19 Identities = 103/120 (85%) Strand = Plus / Plus Query: 292 aggctcaagcaacttctgatggacctaagaaaagtgagaagaagcaaaagaagaaggctg 351 |||| |||||| |||| ||||||||||||||||| ||||||||||||| |||||| |||| Sbjct: 27627631 aggcacaagcagcttcagatggacctaagaaaagcgagaagaagcaaaggaagaaagctg 27627690 Query: 352 cggatgatgaaaaccccgaagatttcattgatcctgagacccctagtgggcagaagaaat 411 ||| ||||| || || || |||||||||||||| || || ||| |||||||||||||| Sbjct: 27627691 tggaggatgagaatcctgaggatttcattgatccagacactcctcatgggcagaagaaat 27627750 Score = 87.7 bits (44), Expect = 3e-14 Identities = 101/120 (84%) Strand = Plus / Plus Query: 292 aggctcaagcaacttctgatggacctaagaaaagtgagaagaagcaaaagaagaaggctg 351 |||| |||||| |||| ||||| ||||| ||||||||||||||||||| |||||| |||| Sbjct: 645971 aggcacaagcagcttcagatggtcctaaaaaaagtgagaagaagcaaaggaagaaagctg 646030 Query: 352 cggatgatgaaaaccccgaagatttcattgatcctgagacccctagtgggcagaagaaat 411 || ||||| || || || |||||||||||||| || || ||| |||||||||||||| Sbjct: 646031 ttgaggatgagaatcctgaggatttcattgatccagacactcctcatgggcagaagaaat 646090 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 232 aggcaagagagaaggaggagaaaaagctcaaggcaaag 269 |||||| |||||| ||||| |||||||||||||||||| Sbjct: 645789 aggcaaaagagaaagaggaaaaaaagctcaaggcaaag 645826 Score = 46.1 bits (23), Expect = 0.090 Identities = 32/35 (91%) Strand = Plus / Plus Query: 200 agagcgggagcggaaactgaagaaagagcagaagg 234 ||||| ||||||||| ||||||||||| ||||||| Sbjct: 27627240 agagctggagcggaagctgaagaaagatcagaagg 27627274 Score = 46.1 bits (23), Expect = 0.090 Identities = 53/63 (84%) Strand = Plus / Minus Query: 348 gctgcggatgatgaaaaccccgaagatttcattgatcctgagacccctagtgggcagaag 407 |||| ||| |||||||| || |||||||| ||||||| || || |||| |||||||||| Sbjct: 12400195 gctgtggaggatgaaaatcctgaagattttattgatcaagacactcctaatgggcagaag 12400136 Query: 408 aaa 410 ||| Sbjct: 12400135 aaa 12400133 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 aagcaacttctgatggacct 317 |||||||||||||||||||| Sbjct: 15301245 aagcaacttctgatggacct 15301226 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 324 agtgagaagaagcaaaagaagaag 347 |||||||||||| ||||||||||| Sbjct: 14380606 agtgagaagaagaaaaagaagaag 14380629
>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence, complete sequence Length = 123406 Score = 103 bits (52), Expect = 4e-19 Identities = 103/120 (85%) Strand = Plus / Minus Query: 292 aggctcaagcaacttctgatggacctaagaaaagtgagaagaagcaaaagaagaaggctg 351 |||| |||||| |||| ||||||||||||||||| ||||||||||||| |||||| |||| Sbjct: 14206 aggcacaagcagcttcagatggacctaagaaaagcgagaagaagcaaaggaagaaagctg 14147 Query: 352 cggatgatgaaaaccccgaagatttcattgatcctgagacccctagtgggcagaagaaat 411 ||| ||||| || || || |||||||||||||| || || ||| |||||||||||||| Sbjct: 14146 tggaggatgagaatcctgaggatttcattgatccagacactcctcatgggcagaagaaat 14087 Score = 46.1 bits (23), Expect = 0.090 Identities = 32/35 (91%) Strand = Plus / Minus Query: 200 agagcgggagcggaaactgaagaaagagcagaagg 234 ||||| ||||||||| ||||||||||| ||||||| Sbjct: 14597 agagctggagcggaagctgaagaaagatcagaagg 14563
>gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0005F16, complete sequence Length = 160053 Score = 87.7 bits (44), Expect = 3e-14 Identities = 101/120 (84%) Strand = Plus / Plus Query: 292 aggctcaagcaacttctgatggacctaagaaaagtgagaagaagcaaaagaagaaggctg 351 |||| |||||| |||| ||||| ||||| ||||||||||||||||||| |||||| |||| Sbjct: 31854 aggcacaagcagcttcagatggtcctaaaaaaagtgagaagaagcaaaggaagaaagctg 31913 Query: 352 cggatgatgaaaaccccgaagatttcattgatcctgagacccctagtgggcagaagaaat 411 || ||||| || || || |||||||||||||| || || ||| |||||||||||||| Sbjct: 31914 ttgaggatgagaatcctgaggatttcattgatccagacactcctcatgggcagaagaaat 31973 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 232 aggcaagagagaaggaggagaaaaagctcaaggcaaag 269 |||||| |||||| ||||| |||||||||||||||||| Sbjct: 31672 aggcaaaagagaaagaggaaaaaaagctcaaggcaaag 31709
>gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0062C05 map S21174S, complete sequence Length = 178867 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 232 aggcaagagagaaggaggagaaaaagctcaaggcaaagcaaaaggaggc 280 |||||||||||||||||||||| | ||||||||| |||||||||||||| Sbjct: 135587 aggcaagagagaaggaggagaagaggctcaaggcgaagcaaaaggaggc 135635
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 232 aggcaagagagaaggaggagaaaaagctcaaggcaaagcaaaaggaggc 280 |||||||||||||||||||||| | ||||||||| |||||||||||||| Sbjct: 18837851 aggcaagagagaaggaggagaagaggctcaaggcgaagcaaaaggaggc 18837899
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 232 aggcaagagagaaggaggagaaaaagctcaaggcaaagcaaaaggaggc 280 |||||||||||||||||||||| | ||||||||| |||||||||||||| Sbjct: 18849105 aggcaagagagaaggaggagaagaggctcaaggcgaagcaaaaggaggc 18849153
>gb|AC025471.6| Homo sapiens chromosome 5 clone RP11-138C1, complete sequence Length = 148607 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 317 taagaaaagtgagaagaagcaaaagaaga 345 ||||||||| ||||||||||||||||||| Sbjct: 117891 taagaaaagggagaagaagcaaaagaaga 117863
>gb|AC005349.1| Homo sapiens chromosome 5, BAC clone 42e2 (LBNL H184), complete sequence Length = 56128 Score = 46.1 bits (23), Expect = 0.090 Identities = 26/27 (96%) Strand = Plus / Minus Query: 226 agcagaaggcaagagagaaggaggaga 252 |||||||| |||||||||||||||||| Sbjct: 40032 agcagaagccaagagagaaggaggaga 40006
>ref|XM_420503.1| PREDICTED: Gallus gallus similar to KIAA1546 protein (LOC422540), mRNA Length = 7572 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 229 agaaggcaagagagaaggaggag 251 ||||||||||||||||||||||| Sbjct: 7331 agaaggcaagagagaaggaggag 7353
>ref|XM_322778.1| Neurospora crassa OR74A predicted protein (NCU03521.1) partial mRNA Length = 174 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 325 gtgagaagaagcaaaagaagaag 347 ||||||||||||||||||||||| Sbjct: 128 gtgagaagaagcaaaagaagaag 150
>ref|XM_951707.1| Neurospora crassa OR74A hypothetical protein (NCU03521.1) partial mRNA Length = 174 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 325 gtgagaagaagcaaaagaagaag 347 ||||||||||||||||||||||| Sbjct: 128 gtgagaagaagcaaaagaagaag 150
>emb|AL442043.1|NCB11E6 Neurospora crassa DNA linkage group II BAC clone B11E6 Length = 69943 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 325 gtgagaagaagcaaaagaagaag 347 ||||||||||||||||||||||| Sbjct: 16990 gtgagaagaagcaaaagaagaag 17012
>emb|AL390092.1|NCB2A19 Neurospora crassa DNA linkage group II BAC clone B2A19 Length = 72788 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 325 gtgagaagaagcaaaagaagaag 347 ||||||||||||||||||||||| Sbjct: 67500 gtgagaagaagcaaaagaagaag 67522
>gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0098H14, complete sequence Length = 132560 Score = 46.1 bits (23), Expect = 0.090 Identities = 53/63 (84%) Strand = Plus / Minus Query: 348 gctgcggatgatgaaaaccccgaagatttcattgatcctgagacccctagtgggcagaag 407 |||| ||| |||||||| || |||||||| ||||||| || || |||| |||||||||| Sbjct: 62450 gctgtggaggatgaaaatcctgaagattttattgatcaagacactcctaatgggcagaag 62391 Query: 408 aaa 410 ||| Sbjct: 62390 aaa 62388
>dbj|AK100513.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099P08, full insert sequence Length = 3639 Score = 46.1 bits (23), Expect = 0.090 Identities = 53/63 (84%) Strand = Plus / Plus Query: 348 gctgcggatgatgaaaaccccgaagatttcattgatcctgagacccctagtgggcagaag 407 |||| ||| |||||||| || |||||||| ||||||| || || |||| |||||||||| Sbjct: 655 gctgtggaggatgaaaatcctgaagattttattgatcaagacactcctaatgggcagaag 714 Query: 408 aaa 410 ||| Sbjct: 715 aaa 717
>dbj|AB085186.1| Candida boidinii FLD1 gene for formaldehyde dehydrogenase, complete cds Length = 2490 Score = 46.1 bits (23), Expect = 0.090 Identities = 26/27 (96%) Strand = Plus / Minus Query: 220 agaaagagcagaaggcaagagagaagg 246 |||||||| |||||||||||||||||| Sbjct: 404 agaaagagaagaaggcaagagagaagg 378
>gb|L40625.1|HUMSUR Homo sapiens sulfonylurea receptor (SUR) mRNA, partial cds Length = 1294 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 229 agaaggcaagagagaaggagga 250 |||||||||||||||||||||| Sbjct: 617 agaaggcaagagagaaggagga 596
>ref|XM_508310.1| PREDICTED: Pan troglodytes similar to sulfonylurea receptor 1 (LOC451056), mRNA Length = 8769 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 229 agaaggcaagagagaaggagga 250 |||||||||||||||||||||| Sbjct: 8002 agaaggcaagagagaaggagga 7981
>ref|NM_000352.2| Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 8 (ABCC8), mRNA Length = 4977 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 229 agaaggcaagagagaaggagga 250 |||||||||||||||||||||| Sbjct: 4300 agaaggcaagagagaaggagga 4279
>gb|AC124798.5| Homo sapiens chromosome 11, clone RP1-239B22, complete sequence Length = 141199 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 229 agaaggcaagagagaaggagga 250 |||||||||||||||||||||| Sbjct: 45733 agaaggcaagagagaaggagga 45754
>emb|AL354668.13| Human DNA sequence from clone RP11-506P24 on chromosome 13 Contains the SPRY2 gene for sprouty homolog 2 (Drosophila) and a CpG island, complete sequence Length = 191652 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 236 aagagagaaggaggagaaaaag 257 |||||||||||||||||||||| Sbjct: 70106 aagagagaaggaggagaaaaag 70127
>emb|CR628312.1| Human DNA sequence from clone XX-NCIH2171_8J01, complete sequence Length = 112000 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 232 aggcaagagagaaggaggagaa 253 |||||||||||||||||||||| Sbjct: 104019 aggcaagagagaaggaggagaa 103998
>gb|AC087257.13| Homo sapiens 12 BAC RP11-709A23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170116 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 232 aggcaagagagaaggaggagaa 253 |||||||||||||||||||||| Sbjct: 80942 aggcaagagagaaggaggagaa 80921
>gb|AC068794.25| Homo sapiens 12 BAC RP13-200J3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 137043 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 232 aggcaagagagaaggaggagaa 253 |||||||||||||||||||||| Sbjct: 108906 aggcaagagagaaggaggagaa 108885
>gb|AC155654.16| Mus musculus 6 BAC RP24-192P21 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 147486 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 228 cagaaggcaagagagaaggagg 249 |||||||||||||||||||||| Sbjct: 82176 cagaaggcaagagagaaggagg 82197
>gb|AC108072.3| Homo sapiens BAC clone RP11-704A16 from 2, complete sequence Length = 36787 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 212 gaaactgaagaaagagcagaag 233 |||||||||||||||||||||| Sbjct: 33637 gaaactgaagaaagagcagaag 33616
>gb|AC003969.1|AC003969 Homo sapiens Chromosome 11p14.3 PAC clone pDJ239b22, complete sequence Length = 141190 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 229 agaaggcaagagagaaggagga 250 |||||||||||||||||||||| Sbjct: 95464 agaaggcaagagagaaggagga 95443
>gb|AC153915.5| Mus musculus 10 BAC RP23-329D23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207169 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 228 cagaaggcaagagagaaggagg 249 |||||||||||||||||||||| Sbjct: 191398 cagaaggcaagagagaaggagg 191377
>gb|AF087138.1|AF087138 Homo sapiens sulfonylurea receptor 1 (SUR1) mRNA, complete cds Length = 4826 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 229 agaaggcaagagagaaggagga 250 |||||||||||||||||||||| Sbjct: 4209 agaaggcaagagagaaggagga 4188
>gb|U63452.1|HSSUR131 Human sulfonylurea receptor (SUR1) gene, exons 34, 35 and 36 Length = 902 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 229 agaaggcaagagagaaggagga 250 |||||||||||||||||||||| Sbjct: 153 agaaggcaagagagaaggagga 132
>gb|U63421.1|HSU63421 Human sulfonylurea receptor (SUR1) mRNA, complete cds Length = 4851 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 229 agaaggcaagagagaaggagga 250 |||||||||||||||||||||| Sbjct: 4174 agaaggcaagagagaaggagga 4153
>gb|L78240.1|HUMSUR1G35 Homo sapiens sulfonylurea receptor (SUR1) gene, exons 34, 35, and 36 Length = 940 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 229 agaaggcaagagagaaggagga 250 |||||||||||||||||||||| Sbjct: 159 agaaggcaagagagaaggagga 138
>gb|L78207.1|HUMSUR1RNA Homo sapiens sulfonylurea receptor (SUR1) mRNA, complete cds Length = 4892 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 229 agaaggcaagagagaaggagga 250 |||||||||||||||||||||| Sbjct: 4212 agaaggcaagagagaaggagga 4191
>gb|AC167164.6| Mus musculus chromosome 7, clone RP24-276M8, complete sequence Length = 171048 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 218 gaagaaagagcagaaggcaagagagaaggagga 250 |||||||||| |||||||||||| |||| |||| Sbjct: 104448 gaagaaagagaagaaggcaagagggaagaagga 104480
>gb|AC120863.9| Mus musculus chromosome 7, clone RP23-84H3, complete sequence Length = 241742 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 218 gaagaaagagcagaaggcaagagagaaggagga 250 |||||||||| |||||||||||| |||| |||| Sbjct: 204807 gaagaaagagaagaaggcaagagggaagaagga 204775
>ref|XM_420603.1| PREDICTED: Gallus gallus similar to sodium bicarbonate cotransporter (LOC422649), mRNA Length = 4408 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 149 ggagaaggcggcgtcagaggagaag 173 |||||||||||||||| |||||||| Sbjct: 120 ggagaaggcggcgtcataggagaag 144
>ref|XM_648481.1| Entamoeba histolytica HM-1:IMSS glutamate synthase small subunit (78.t00007) partial mRNA Length = 1338 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 agaagaagcaaaagaagaagg 348 ||||||||||||||||||||| Sbjct: 921 agaagaagcaaaagaagaagg 941
>ref|XM_652212.1| Entamoeba histolytica HM-1:IMSS glutamate synthase small subunit (3.t00052) partial mRNA Length = 1293 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 agaagaagcaaaagaagaagg 348 ||||||||||||||||||||| Sbjct: 876 agaagaagcaaaagaagaagg 896
>gb|AC113059.7| Mus musculus chromosome 10, clone RP23-255F14, complete sequence Length = 211296 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 318 aagaaaagtgagaagaagcaaaagaagaa 346 |||||||| |||| ||||||||||||||| Sbjct: 122612 aagaaaagagagatgaagcaaaagaagaa 122640
>gb|AC021709.12| Mus musculus chromosome 10, clone RP23-194I3, complete sequence Length = 319367 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 318 aagaaaagtgagaagaagcaaaagaagaa 346 |||||||| |||| ||||||||||||||| Sbjct: 213820 aagaaaagagagatgaagcaaaagaagaa 213848
>emb|AL603652.7| Human DNA sequence from clone RP11-238D24 on chromosome 9, complete sequence Length = 57507 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 227 gcagaaggcaagagagaagga 247 ||||||||||||||||||||| Sbjct: 2106 gcagaaggcaagagagaagga 2086
>emb|AL354856.9| Human DNA sequence from clone RP11-290P3 on chromosome 6, complete sequence Length = 113146 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 317 taagaaaagtgagaagaagcaaaag 341 |||||||||||||||||| |||||| Sbjct: 33678 taagaaaagtgagaagaaacaaaag 33654
>gb|AC069419.20| Homo sapiens 3 BAC RP11-11D18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 61415 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 tgtcagggacactctgctctc 43 ||||||||||||||||||||| Sbjct: 55239 tgtcagggacactctgctctc 55219
>gb|AC154210.2| Mus musculus BAC clone RP24-113C3 from chromosome 13, complete sequence Length = 193176 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 tctctcaccatggagaagccc 134 ||||||||||||||||||||| Sbjct: 177775 tctctcaccatggagaagccc 177755
>emb|BX323033.6| Zebrafish DNA sequence from clone DKEYP-63D11, complete sequence Length = 171058 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 gaagaagcaaaagaagaaggc 349 ||||||||||||||||||||| Sbjct: 145157 gaagaagcaaaagaagaaggc 145137
>emb|BX323861.10| Zebrafish DNA sequence from clone CH211-209F23 in linkage group 2, complete sequence Length = 173663 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 327 gagaagaagcaaaagaagaag 347 ||||||||||||||||||||| Sbjct: 95728 gagaagaagcaaaagaagaag 95748
>gb|AY122165.1| Drosophila melanogaster LD24232 full insert cDNA Length = 2283 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 327 gagaagaagcaaaagaagaag 347 ||||||||||||||||||||| Sbjct: 1582 gagaagaagcaaaagaagaag 1602
>gb|AF380344.1|AF380343S2 Homo sapiens pontin 52 (RUVBL1) gene, exons 2 through 11, and complete cds Length = 40881 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 tgtcagggacactctgctctc 43 ||||||||||||||||||||| Sbjct: 36705 tgtcagggacactctgctctc 36685
>ref|NM_133088.1| Drosophila melanogaster Ing3 CG6632-RA (Ing3), mRNA Length = 2298 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 327 gagaagaagcaaaagaagaag 347 ||||||||||||||||||||| Sbjct: 1620 gagaagaagcaaaagaagaag 1640
>gb|AC110911.18| Mus musculus chromosome 7, clone RP24-357A15, complete sequence Length = 146978 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 218 gaagaaagagcagaaggcaagagagaaggagga 250 |||||||||| |||||||||||| |||| |||| Sbjct: 90864 gaagaaagagaagaaggcaagagggaagaagga 90896
>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome Length = 2174500 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 agaagaagcaaaagaagaagg 348 ||||||||||||||||||||| Sbjct: 1101615 agaagaagcaaaagaagaagg 1101635
>gb|AC008936.6| Homo sapiens chromosome 5 clone CTD-2309I16, complete sequence Length = 56515 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 tctgatggacctaagaaaagt 326 ||||||||||||||||||||| Sbjct: 41453 tctgatggacctaagaaaagt 41473
>gb|AC154748.2| Mus musculus BAC clone RP23-116P6 from chromosome 13, complete sequence Length = 203908 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 114 tctctcaccatggagaagccc 134 ||||||||||||||||||||| Sbjct: 193131 tctctcaccatggagaagccc 193151
>gb|AC026461.11| Homo sapiens chromosome 16 clone RP11-249C24, complete sequence Length = 168392 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 319 agaaaagtgagaagaagcaaaagaagaag 347 ||||||| ||||||||| ||||||||||| Sbjct: 133698 agaaaagggagaagaaggaaaagaagaag 133670
>gb|AC012373.14|AC012373 Drosophila melanogaster, chromosome X, region 17B-17C, BAC clone BACR17H16, complete sequence Length = 182080 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 327 gagaagaagcaaaagaagaag 347 ||||||||||||||||||||| Sbjct: 144022 gagaagaagcaaaagaagaag 144002
>gb|AE004522.1| Pseudomonas aeruginosa PAO1, section 83 of 529 of the complete genome Length = 15724 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 67 aagcgccggcgcgcggccccggcggcgcg 95 ||||||||||||||||| |||||||||| Sbjct: 14294 aagcgccggcgcgcggcggcggcggcgcg 14266
>gb|AC119914.10| Mus musculus chromosome 15, clone RP24-244H15, complete sequence Length = 213223 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 agaaggcaagagagaaggagg 249 ||||||||||||||||||||| Sbjct: 66877 agaaggcaagagagaaggagg 66897
>gb|AC009155.3|AC009155 Homo sapiens chromosome 16 clone RP11-5A3, complete sequence Length = 143860 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 319 agaaaagtgagaagaagcaaaagaagaag 347 ||||||| ||||||||| ||||||||||| Sbjct: 91285 agaaaagggagaagaaggaaaagaagaag 91313
>emb|BX647488.1|HSM807634 Homo sapiens mRNA; cDNA DKFZp686C14128 (from clone DKFZp686C14128) Length = 4094 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 tgtcagggacactctgctctc 43 ||||||||||||||||||||| Sbjct: 446 tgtcagggacactctgctctc 426
>gb|AC006670.1| Caenorhabditis elegans cosmid K07A3, complete sequence Length = 36454 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 323 aagtgagaagaagcaaaagaagaag 347 ||||||||||||| ||||||||||| Sbjct: 29019 aagtgagaagaagaaaaagaagaag 28995
>gb|AE003509.5| Drosophila melanogaster chromosome X, section 61 of 74 of the complete sequence Length = 315109 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 327 gagaagaagcaaaagaagaag 347 ||||||||||||||||||||| Sbjct: 208446 gagaagaagcaaaagaagaag 208426
>emb|BX284666.7| Zebrafish DNA sequence from clone CH211-190K17 in linkage group 22, complete sequence Length = 139272 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 327 gagaagaagcaaaagaagaag 347 ||||||||||||||||||||| Sbjct: 60233 gagaagaagcaaaagaagaag 60213
>gb|BC068350.1| Danio rerio SERPINE1 mRNA binding protein 1, mRNA (cDNA clone MGC:85661 IMAGE:6960084), complete cds Length = 2317 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 329 gaagaagcaaaagaagaaggc 349 ||||||||||||||||||||| Sbjct: 842 gaagaagcaaaagaagaaggc 862
>gb|BC046876.1| Danio rerio SERPINE1 mRNA binding protein 1, mRNA (cDNA clone MGC:55489 IMAGE:2640661), complete cds Length = 2306 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 329 gaagaagcaaaagaagaaggc 349 ||||||||||||||||||||| Sbjct: 858 gaagaagcaaaagaagaaggc 878
>ref|NM_214714.1| Danio rerio SERPINE1 mRNA binding protein 1 (serbp1), mRNA Length = 2317 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 329 gaagaagcaaaagaagaaggc 349 ||||||||||||||||||||| Sbjct: 842 gaagaagcaaaagaagaaggc 862
>gb|AC154043.1| Drosophila melanogaster clone BACR39O11, complete sequence Length = 182468 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 agaagaagcaaaagaagaag 347 |||||||||||||||||||| Sbjct: 2720 agaagaagcaaaagaagaag 2701
>gb|AC154041.1| Drosophila melanogaster clone BACR43N11, complete sequence Length = 157286 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 agaagaagcaaaagaagaag 347 |||||||||||||||||||| Sbjct: 8507 agaagaagcaaaagaagaag 8526
>ref|NM_105757.2| Arabidopsis thaliana CLE17 (CLAVATA3/ESR-RELATED 17); receptor binding AT1G70895 (CLE17) mRNA, complete cds Length = 856 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 caagagagaaggaggagaaa 254 |||||||||||||||||||| Sbjct: 178 caagagagaaggaggagaaa 159
>ref|NM_188119.1| Oryza sativa (japonica cultivar-group), Ozsa8551 predicted mRNA Length = 2388 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 cggcgcgcggccccggcggc 92 |||||||||||||||||||| Sbjct: 1541 cggcgcgcggccccggcggc 1560
>gb|AC159309.2| Mus musculus BAC clone RP23-157H14 from chromosome 16, complete sequence Length = 201546 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 aagagagaaggaggagaaaa 255 |||||||||||||||||||| Sbjct: 61078 aagagagaaggaggagaaaa 61059
>ref|XM_477896.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3628 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 gaaactgaagaaagagcaga 231 |||||||||||||||||||| Sbjct: 2824 gaaactgaagaaagagcaga 2843
>ref|NM_184594.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1776 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 324 agtgagaagaagcaaaagaagaag 347 |||||||||||| ||||||||||| Sbjct: 1654 agtgagaagaagaaaaagaagaag 1677
>gb|U80022.2| Caenorhabditis elegans cosmid F12F3, complete sequence Length = 36859 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 agaagaagcaaaagaagaag 347 |||||||||||||||||||| Sbjct: 13827 agaagaagcaaaagaagaag 13808
>gb|AC159316.3| Mus musculus BAC clone RP23-93F3 from chromosome 8, complete sequence Length = 240812 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 aagagagaaggaggagaaaa 255 |||||||||||||||||||| Sbjct: 41569 aagagagaaggaggagaaaa 41550
>gb|AC103551.7| Oryza sativa chromosome 3 BAC OSJNBb0058G04 genomic sequence, complete sequence Length = 137709 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 aagcaacttctgatggacct 317 |||||||||||||||||||| Sbjct: 30637 aagcaacttctgatggacct 30656
>gb|BC058111.1| Mus musculus zinc fingers and homeoboxes 3, mRNA (cDNA clone MGC:67301 IMAGE:6836697), complete cds Length = 4499 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ctgtcagggacactctgctc 41 |||||||||||||||||||| Sbjct: 929 ctgtcagggacactctgctc 910
>gb|AY576796.1| Actinoplanes phage phiAsp2, complete genome Length = 58638 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 gcggccccggcggcgcgacc 98 |||||||||||||||||||| Sbjct: 9817 gcggccccggcggcgcgacc 9836
>ref|NM_177263.3| Mus musculus zinc fingers and homeoboxes 3 (Zhx3), mRNA Length = 4499 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ctgtcagggacactctgctc 41 |||||||||||||||||||| Sbjct: 929 ctgtcagggacactctgctc 910
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 gcgcgcggccccggcggcgc 94 |||||||||||||||||||| Sbjct: 48421 gcgcgcggccccggcggcgc 48440
>ref|NM_023854.1| Mus musculus zinc finger protein 289 (Zfp289), mRNA Length = 2752 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 agaaggaggagaaaaagctc 260 |||||||||||||||||||| Sbjct: 881 agaaggaggagaaaaagctc 900
>gb|AC145970.2| Pan troglodytes BAC clone RP43-17L12 from 7, complete sequence Length = 182677 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 cggcgcgcggccccggcggc 92 |||||||||||||||||||| Sbjct: 10351 cggcgcgcggccccggcggc 10332
>gb|CP000114.1| Streptococcus agalactiae A909, complete genome Length = 2127839 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 gaaggaggagaaaaagctca 261 |||||||||||||||||||| Sbjct: 1491313 gaaggaggagaaaaagctca 1491294
>gb|AC102589.9| Mus musculus chromosome 8, clone RP23-334O19, complete sequence Length = 234829 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 aagaagcaaaagaagaaggc 349 |||||||||||||||||||| Sbjct: 210976 aagaagcaaaagaagaaggc 210995
>gb|M98552.2| Caenorhabditis elegans cosmid ZK370, complete sequence Length = 38725 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 327 gagaagaagcaaaagaagaaggct 350 ||||||||||| |||||||||||| Sbjct: 25828 gagaagaagcagaagaagaaggct 25805
>ref|XM_754826.1| Ustilago maydis 521 hypothetical protein (UM03772.1) partial mRNA Length = 1662 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 aagctgcttgacgacaagga 190 |||||||||||||||||||| Sbjct: 1393 aagctgcttgacgacaagga 1412
>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome Length = 135301 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 gcgcgcggccccggcggcgc 94 |||||||||||||||||||| Sbjct: 132301 gcgcgcggccccggcggcgc 132320 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 gcgcgcggccccggcggcgc 94 |||||||||||||||||||| Sbjct: 105917 gcgcgcggccccggcggcgc 105898
>ref|XM_380515.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00339.1) partial mRNA Length = 2079 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 tgagaagaagcaaaagaaga 345 |||||||||||||||||||| Sbjct: 1503 tgagaagaagcaaaagaaga 1522
>gb|AC130838.3| Mus musculus BAC clone RP24-369B4 from chromosome 12, complete sequence Length = 149814 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 agaagaagcaaaagaagaag 347 |||||||||||||||||||| Sbjct: 133421 agaagaagcaaaagaagaag 133440
>ref|XM_799035.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506107.10) partial mRNA Length = 2697 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 gaagaaagagcagaaggcaa 237 |||||||||||||||||||| Sbjct: 2542 gaagaaagagcagaaggcaa 2561
>ref|XM_803036.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053504173.60) partial mRNA Length = 2664 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 gaagaaagagcagaaggcaa 237 |||||||||||||||||||| Sbjct: 2509 gaagaaagagcagaaggcaa 2528
>gb|AC146539.2| Gasterosteus aculeatus clone CH213-129C17, complete sequence Length = 202686 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 agaagaagcaaaagaagaag 347 |||||||||||||||||||| Sbjct: 73837 agaagaagcaaaagaagaag 73856
>ref|XM_720753.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00631) partial mRNA Length = 555 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 agaagaagcaaaagaagaag 347 |||||||||||||||||||| Sbjct: 420 agaagaagcaaaagaagaag 439 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 agaagaagcaaaagaagaag 347 |||||||||||||||||||| Sbjct: 408 agaagaagcaaaagaagaag 427 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 agaagaagcaaaagaagaag 347 |||||||||||||||||||| Sbjct: 396 agaagaagcaaaagaagaag 415
>gb|AC164313.3| Mus musculus BAC clone RP23-24F12 from chromosome 3, complete sequence Length = 196368 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 agaagaagcaaaagaagaag 347 |||||||||||||||||||| Sbjct: 182520 agaagaagcaaaagaagaag 182539
>gb|AC146690.1| Gasterosteus aculeatus clone CH213-156J22, complete sequence Length = 166930 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 agaagaagcaaaagaagaag 347 |||||||||||||||||||| Sbjct: 44512 agaagaagcaaaagaagaag 44531
>gb|AC124962.19| Medicago truncatula clone mth2-24d19, complete sequence Length = 126541 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gagagaaggaggagaaaaag 257 |||||||||||||||||||| Sbjct: 91749 gagagaaggaggagaaaaag 91730
>gb|AC123975.16| Medicago truncatula clone mth2-12m13, complete sequence Length = 121884 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 gagagaaggaggagaaaaag 257 |||||||||||||||||||| Sbjct: 106996 gagagaaggaggagaaaaag 107015
>ref|XM_499639.1| Yarrowia lipolytica CLIB122, YALI0A01023g predicted mRNA Length = 3237 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 326 tgagaagaagcaaaagaagaaggc 349 |||||||||||| ||||||||||| Sbjct: 3114 tgagaagaagcagaagaagaaggc 3137
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 gcggccccggcggcgcgacc 98 |||||||||||||||||||| Sbjct: 90997 gcggccccggcggcgcgacc 91016
>emb|AL161450.14| Human DNA sequence from clone RP11-39K24 on chromosome 9 Contains the 3' end of the JAK2 gene for Janus kinase 2 (a protein tyrosine kinase), a casein kinase pseudogene, a trans-prenyltransferase (TPT) pseudogene, a NADH dehydrogenase 6 (MTND6) pseuodgene, a NADH dehydrogenase 1 (MTND1) pseudogene, a cytochrome c oxidase I (MTCO1) pseudogene, a cytochrome c oxidase II (MTCO2) pseudogene, an ATP synthase 6 (MTATP6) pseudogene, a cytochrome c oxidase III (MTCO3) pseudogene, a NADH dehydrogenase 4 (MTND4)pseudogene, a pseudogene similar to part of NADH dehydrogenase 5 (MTND5), a transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47) (TCF3) pseudogene, an immunoglobulin heavy constant epsilon pseudogene 2 (IGHEP2), a novel gene, the INSL6 gene for insulin-like 6 (RIF1) and 4 CpG islands, complete sequence Length = 171146 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 cggcgcgcggccccggcggc 92 |||||||||||||||||||| Sbjct: 67411 cggcgcgcggccccggcggc 67430
>gb|AE014259.1| Streptococcus agalactiae 2603V/R section 69 of 100 of the complete genome Length = 20495 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 gaaggaggagaaaaagctca 261 |||||||||||||||||||| Sbjct: 6976 gaaggaggagaaaaagctca 6957
>gb|AC159379.14| Mus musculus 10 BAC RP23-210F14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 226172 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 aagagagaaggaggagaaaa 255 |||||||||||||||||||| Sbjct: 128232 aagagagaaggaggagaaaa 128251
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29 Length = 300100 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ggccccggcggcgcgaccac 100 |||||||||||||||||||| Sbjct: 138762 ggccccggcggcgcgaccac 138743
>emb|AL766851.1|SAG766851 Streptococcus agalactiae NEM316 complete genome, segment 9 Length = 113050 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 gaaggaggagaaaaagctca 261 |||||||||||||||||||| Sbjct: 84371 gaaggaggagaaaaagctca 84352
>gb|BC005495.1| Mus musculus zinc finger protein 289, mRNA (cDNA clone MGC:7383 IMAGE:3487811), complete cds Length = 2801 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 agaaggaggagaaaaagctc 260 |||||||||||||||||||| Sbjct: 920 agaaggaggagaaaaagctc 939
>gb|AC151836.3| Mus musculus BAC clone RP23-359F5 from chromosome 14, complete sequence Length = 230502 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 agaagaagcaaaagaagaag 347 |||||||||||||||||||| Sbjct: 161974 agaagaagcaaaagaagaag 161993
>gb|AC165428.1| Strongylocentrotus purpuratus BAC clone contig containing Eve, the hox cluster, cholinesterase, and COLP5alpha genes, complete sequence Length = 796348 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 agaagaagcaaaagaagaag 347 |||||||||||||||||||| Sbjct: 230943 agaagaagcaaaagaagaag 230962
>gb|AC141561.5| Mus musculus BAC clone RP23-457C15 from chromosome 3, complete sequence Length = 169547 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 agaagaagcaaaagaagaag 347 |||||||||||||||||||| Sbjct: 138126 agaagaagcaaaagaagaag 138145
>gb|AC036196.10| Homo sapiens chromosome 15, clone RP11-599A21, complete sequence Length = 180366 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 gaagaaagagcagaaggcaa 237 |||||||||||||||||||| Sbjct: 68204 gaagaaagagcagaaggcaa 68223
>emb|AL935056.18| Mouse DNA sequence from clone RP23-185F7 on chromosome 2, complete sequence Length = 146086 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 319 agaaaagtgagaagaagcaaaagaagaa 346 ||||||||||||| ||||||||| |||| Sbjct: 3509 agaaaagtgagaaaaagcaaaaggagaa 3536
>gb|AC068870.17| Homo sapiens chromosome , clone RP11-775C24, complete sequence Length = 194237 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 gaagaaagagcagaaggcaa 237 |||||||||||||||||||| Sbjct: 177166 gaagaaagagcagaaggcaa 177185
>gb|AC105081.4| Homo sapiens chromosome 8, clone CTC-788C1, complete sequence Length = 158605 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 aagagagaaggaggagaaaa 255 |||||||||||||||||||| Sbjct: 655 aagagagaaggaggagaaaa 674
>gb|AC105129.4| Homo sapiens chromosome 15, clone RP11-349G13, complete sequence Length = 198295 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 gacaaggagctagagctaga 202 |||||||||||||||||||| Sbjct: 124623 gacaaggagctagagctaga 124642
>gb|AC004411.3| Arabidopsis thaliana chromosome 2 clone F14M4 map CIC06C03, complete sequence Length = 106329 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 agaagaagcaaaagaagaag 347 |||||||||||||||||||| Sbjct: 81803 agaagaagcaaaagaagaag 81784
>ref|NM_079201.2| Drosophila melanogaster mitochondrial ribosomal protein S6 CG15016-RA (mRpS6), mRNA Length = 627 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 agaagaagcaaaagaagaag 347 |||||||||||||||||||| Sbjct: 526 agaagaagcaaaagaagaag 545
>dbj|AK143296.1| Mus musculus 2 days pregnant adult female oviduct cDNA, RIKEN full-length enriched library, clone:E230037F05 product:zinc fingers and homeoboxes 3, full insert sequence Length = 4462 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ctgtcagggacactctgctc 41 |||||||||||||||||||| Sbjct: 910 ctgtcagggacactctgctc 891
>dbj|AK145512.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0009C01 product:unclassifiable, full insert sequence Length = 2207 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 aagagagaaggaggagaaaa 255 |||||||||||||||||||| Sbjct: 1305 aagagagaaggaggagaaaa 1324
>dbj|AK147259.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1003G16 product:zinc fingers and homeoboxes 3, full insert sequence Length = 9067 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ctgtcagggacactctgctc 41 |||||||||||||||||||| Sbjct: 751 ctgtcagggacactctgctc 732
>dbj|AK149837.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530022I24 product:zinc finger protein 289, full insert sequence Length = 2761 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 agaaggaggagaaaaagctc 260 |||||||||||||||||||| Sbjct: 907 agaaggaggagaaaaagctc 926
>gb|AY070674.1| Drosophila melanogaster RH10862 full length cDNA Length = 639 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 agaagaagcaaaagaagaag 347 |||||||||||||||||||| Sbjct: 526 agaagaagcaaaagaagaag 545
>gb|AC099762.1| Caenorhabditis briggsae cosmid CB021D15, complete sequence Length = 98394 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 324 agtgagaagaagcaaaagaagaag 347 |||||||||||| ||||||||||| Sbjct: 29059 agtgagaagaaggaaaagaagaag 29082
>gb|AC026773.6| Homo sapiens chromosome 5 clone CTC-230L18, complete sequence Length = 130965 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 gagcagaaggcaagagagaa 244 |||||||||||||||||||| Sbjct: 45727 gagcagaaggcaagagagaa 45746
>gb|AC026409.4| Homo sapiens chromosome 5 clone CTC-437M9, complete sequence Length = 163384 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 gagcagaaggcaagagagaa 244 |||||||||||||||||||| Sbjct: 22638 gagcagaaggcaagagagaa 22619
>dbj|AK168489.1| Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920028C10 product:zinc finger protein 289, full insert sequence Length = 2736 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 agaaggaggagaaaaagctc 260 |||||||||||||||||||| Sbjct: 882 agaaggaggagaaaaagctc 901
>dbj|AK167175.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0037F02 product:unclassifiable, full insert sequence Length = 2207 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 aagagagaaggaggagaaaa 255 |||||||||||||||||||| Sbjct: 1305 aagagagaaggaggagaaaa 1324
>dbj|AK169144.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920083J04 product:zinc finger protein 289, full insert sequence Length = 2749 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 agaaggaggagaaaaagctc 260 |||||||||||||||||||| Sbjct: 895 agaaggaggagaaaaagctc 914
>dbj|AK009565.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310032E02 product:zinc finger protein 289, full insert sequence Length = 2799 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 agaaggaggagaaaaagctc 260 |||||||||||||||||||| Sbjct: 938 agaaggaggagaaaaagctc 957
>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete sequence Length = 158714 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 324 agtgagaagaagcaaaagaagaag 347 |||||||||||| ||||||||||| Sbjct: 134860 agtgagaagaagaaaaagaagaag 134883
>dbj|AK029603.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930412E20 product:DJ511B24.3 (KIAA0395 (PROBABLE HOMEOBOX PROTEIN)) homolog [Homo sapiens], full insert sequence Length = 3352 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ctgtcagggacactctgctc 41 |||||||||||||||||||| Sbjct: 801 ctgtcagggacactctgctc 782
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 cgccggcgcgcggccccggc 89 |||||||||||||||||||| Sbjct: 714139 cgccggcgcgcggccccggc 714158
>dbj|AK030057.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932418O04 product:DJ511B24.3 (KIAA0395 (PROBABLE HOMEOBOX PROTEIN)) homolog [Homo sapiens], full insert sequence Length = 3611 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ctgtcagggacactctgctc 41 |||||||||||||||||||| Sbjct: 894 ctgtcagggacactctgctc 875
>gb|AC153628.3| Mus musculus 6 BAC RP23-13B24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 219322 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 acctaagaaaagtgagaaga 333 |||||||||||||||||||| Sbjct: 125144 acctaagaaaagtgagaaga 125163
>gb|AF229439.1|AF229439 Mus musculus zinc finger protein 289 (Zfp289) mRNA, complete cds Length = 2752 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 agaaggaggagaaaaagctc 260 |||||||||||||||||||| Sbjct: 881 agaaggaggagaaaaagctc 900
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 cggcgcgcggccccggcggc 92 |||||||||||||||||||| Sbjct: 9864336 cggcgcgcggccccggcggc 9864355
>ref|XM_392112.2| PREDICTED: Apis mellifera similar to GA15443-PA (LOC408569), mRNA Length = 1372 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 agaagaagcaaaagaagaag 347 |||||||||||||||||||| Sbjct: 318 agaagaagcaaaagaagaag 337
>emb|BX818689.1|CNS0AB2G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL92ZA06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 734 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 caagagagaaggaggagaaa 254 |||||||||||||||||||| Sbjct: 46 caagagagaaggaggagaaa 27
>emb|BX824082.1|CNS0A5IN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH20ZE07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1637 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 agaagaagcaaaagaagaag 347 |||||||||||||||||||| Sbjct: 1450 agaagaagcaaaagaagaag 1469
>gb|AC112710.4| Homo sapiens BAC clone RP13-620L6 from 4, complete sequence Length = 74521 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 caggcttcaggctcaagcaa 303 |||||||||||||||||||| Sbjct: 60614 caggcttcaggctcaagcaa 60595
>emb|BX841936.1|CNS09Y4H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL49ZE05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 722 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 caagagagaaggaggagaaa 254 |||||||||||||||||||| Sbjct: 46 caagagagaaggaggagaaa 27
>gb|AC114814.5| Homo sapiens BAC clone RP11-1345D17 from 2, complete sequence Length = 181706 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gagagaaggaggagaaaaag 257 |||||||||||||||||||| Sbjct: 140524 gagagaaggaggagaaaaag 140505
>gb|AC155710.5| Mus musculus 10 BAC RP24-141K13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 183533 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 aagagagaaggaggagaaaa 255 |||||||||||||||||||| Sbjct: 4009 aagagagaaggaggagaaaa 4028
>dbj|AB099703.2| Mus musculus ZHX3 gene for transcription factor ZHX3, complete cds Length = 13008 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ctgtcagggacactctgctc 41 |||||||||||||||||||| Sbjct: 1998 ctgtcagggacactctgctc 1979
>gb|AC044787.6|AC044787 Homo sapiens chromosome 15 clone CTD-2270N23 map 15q21, complete sequence Length = 148147 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 atcctgagacccctagtggg 401 |||||||||||||||||||| Sbjct: 82670 atcctgagacccctagtggg 82689
>gb|AC012446.4| Homo sapiens BAC clone RP11-101A12 from 2, complete sequence Length = 172749 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 gcagaaggcaagagagaaggagga 250 |||||||||||||||||| ||||| Sbjct: 152183 gcagaaggcaagagagaatgagga 152160
>gb|AC026329.14| Homo sapiens 3 BAC RP11-325J6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 117404 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 actgaagaaagagcagaagg 234 |||||||||||||||||||| Sbjct: 58737 actgaagaaagagcagaagg 58756
>gb|AY088427.1| Arabidopsis thaliana clone 6625 mRNA, complete sequence Length = 730 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 caagagagaaggaggagaaa 254 |||||||||||||||||||| Sbjct: 52 caagagagaaggaggagaaa 33
>gb|AC104638.11| Homo sapiens 3 BAC RP11-689C17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 34051 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 gagaagaagcaaaagaagaa 346 |||||||||||||||||||| Sbjct: 9108 gagaagaagcaaaagaagaa 9127
>gb|AE000789.1| Borrelia burgdorferi B31 plasmid lp28-4, complete sequence Length = 27323 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 aagaagcaaaagaagaaggc 349 |||||||||||||||||||| Sbjct: 21408 aagaagcaaaagaagaaggc 21389
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 gccccggcggcgcgaccacc 101 |||||||||||||||||||| Sbjct: 3240672 gccccggcggcgcgaccacc 3240691
>gb|AC092576.3| Homo sapiens BAC clone RP11-7N16 from 2, complete sequence Length = 152747 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gagagaaggaggagaaaaag 257 |||||||||||||||||||| Sbjct: 7351 gagagaaggaggagaaaaag 7332
>dbj|AP001072.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025D05 Length = 145684 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 cggcgcgcggccccggcggc 92 |||||||||||||||||||| Sbjct: 128586 cggcgcgcggccccggcggc 128605
>dbj|AP000815.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0003H10 Length = 142418 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 cggcgcgcggccccggcggc 92 |||||||||||||||||||| Sbjct: 102 cggcgcgcggccccggcggc 121
>gb|AE016754.1| Mus musculus chromosome 10 high-growth region, section 2 of 2 of the complete sequence Length = 303688 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 aagagagaaggaggagaaaa 255 |||||||||||||||||||| Sbjct: 168269 aagagagaaggaggagaaaa 168250
>gb|AF229129.1|AF229129 Tahyna virus middle segment RNA ORF (M-RNA) mRNA, complete cds Length = 4491 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 gtgagaagaagcaaaagaag 344 |||||||||||||||||||| Sbjct: 1563 gtgagaagaagcaaaagaag 1582
>dbj|AK188383.1| Mus musculus cDNA, clone:Y0G0144P14, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000028692, based on BLAT search Length = 261 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 agaaggaggagaaaaagctc 260 |||||||||||||||||||| Sbjct: 122 agaaggaggagaaaaagctc 141
>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome Length = 3031430 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 ggaggagaaaaagctcaagg 264 |||||||||||||||||||| Sbjct: 2758433 ggaggagaaaaagctcaagg 2758414
>gb|AC010219.4|AC010219 Homo sapiens chromosome 5 clone CTC-251I16, complete sequence Length = 127922 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 gctgccaggcttcaggctca 298 |||||||||||||||||||| Sbjct: 60835 gctgccaggcttcaggctca 60854
>emb|BX649518.6| Zebrafish DNA sequence from clone CH211-162I8 in linkage group 4, complete sequence Length = 182631 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 gaaactgaagaaagagcaga 231 |||||||||||||||||||| Sbjct: 139643 gaaactgaagaaagagcaga 139624
>emb|AL670220.8| Mouse DNA sequence from clone RP23-260P9 on chromosome X, complete sequence Length = 180488 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 gaaggcaagagagaaggagg 249 |||||||||||||||||||| Sbjct: 21572 gaaggcaagagagaaggagg 21591
>dbj|AB099527.2| Mus musculus mRNA for transcription factor ZHX3, complete cds Length = 2856 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ctgtcagggacactctgctc 41 |||||||||||||||||||| Sbjct: 473 ctgtcagggacactctgctc 454
>dbj|AK103723.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138C07, full insert sequence Length = 1987 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 324 agtgagaagaagcaaaagaagaag 347 |||||||||||| ||||||||||| Sbjct: 1733 agtgagaagaagaaaaagaagaag 1756
>dbj|AK074000.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073D02, full insert sequence Length = 3630 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 gaaactgaagaaagagcaga 231 |||||||||||||||||||| Sbjct: 2827 gaaactgaagaaagagcaga 2846
>dbj|AK063289.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-E01, full insert sequence Length = 2185 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 324 agtgagaagaagcaaaagaagaag 347 |||||||||||| ||||||||||| Sbjct: 1732 agtgagaagaagaaaaagaagaag 1755
>emb|AL954652.3| Zebrafish DNA sequence from clone CH211-239O15 in linkage group 4, complete sequence Length = 152900 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 agaagaagcaaaagaagaag 347 |||||||||||||||||||| Sbjct: 71972 agaagaagcaaaagaagaag 71991
>emb|Z71185.1|CEC35A5 Caenorhabditis elegans Cosmid C35A5, complete sequence Length = 42031 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 agaagaagcaaaagaagaag 347 |||||||||||||||||||| Sbjct: 29397 agaagaagcaaaagaagaag 29416
>gb|AC008148.2|AC008148 Arabidopsis thaliana chromosome I BAC F15H11 genomic sequence, complete sequence Length = 110514 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 caagagagaaggaggagaaa 254 |||||||||||||||||||| Sbjct: 45676 caagagagaaggaggagaaa 45657
>gb|AF123485.1|AF123485 Tahyna virus polyprotein mRNA, complete cds Length = 4490 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 gtgagaagaagcaaaagaag 344 |||||||||||||||||||| Sbjct: 1563 gtgagaagaagcaaaagaag 1582
>gb|AE003481.3| Drosophila melanogaster chromosome 3L, section 15 of 83 of the complete sequence Length = 315988 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 agaagaagcaaaagaagaag 347 |||||||||||||||||||| Sbjct: 56462 agaagaagcaaaagaagaag 56481
>dbj|AP000478.6| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-14E22, complete sequence Length = 121689 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 187 aggagctagagctagagcgggagc 210 |||||||||||||||||| ||||| Sbjct: 48973 aggagctagagctagagcaggagc 48996
>dbj|AP001978.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-258O13, complete sequence Length = 161602 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 187 aggagctagagctagagcgggagc 210 |||||||||||||||||| ||||| Sbjct: 153278 aggagctagagctagagcaggagc 153301
>gb|AC102211.23| Mus musculus chromosome 3, clone RP24-369F14, complete sequence Length = 142790 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 agaagaagcaaaagaagaag 347 |||||||||||||||||||| Sbjct: 114701 agaagaagcaaaagaagaag 114682
>gb|AC113471.9| Mus musculus chromosome 7, clone RP23-268E17, complete sequence Length = 200878 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 gcaagagagaaggaggagaa 253 |||||||||||||||||||| Sbjct: 35599 gcaagagagaaggaggagaa 35580
>gb|DQ317973.1| Mus musculus zinc fingers and homeoboxes 3 (Zhx3) mRNA, complete cds Length = 2856 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ctgtcagggacactctgctc 41 |||||||||||||||||||| Sbjct: 473 ctgtcagggacactctgctc 454
>emb|Z81140.1|CEW10G6 Caenorhabditis elegans Cosmid W10G6, complete sequence Length = 26271 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 agaagaagcaaaagaagaag 347 |||||||||||||||||||| Sbjct: 13640 agaagaagcaaaagaagaag 13659
>gb|AC122426.5| Mus musculus BAC clone RP24-174I4 from 9, complete sequence Length = 153629 Score = 40.1 bits (20), Expect = 5.5 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 220 agaaagagcagaaggca-agagagaaggagga 250 ||||||||||||||||| |||||||| ||||| Sbjct: 103999 agaaagagcagaaggcagagagagaaagagga 104030
>gb|AC139294.4| Mus musculus BAC clone RP24-239E14 from 14, complete sequence Length = 183363 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 agaagaagcaaaagaagaag 347 |||||||||||||||||||| Sbjct: 44571 agaagaagcaaaagaagaag 44590
>emb|CT025608.12| Mouse DNA sequence from clone RP23-292F17 on chromosome 9, complete sequence Length = 200204 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 caagagagaaggaggagaaa 254 |||||||||||||||||||| Sbjct: 127764 caagagagaaggaggagaaa 127783
>gb|AC132397.4| Mus musculus BAC clone RP23-397C5 from 5, complete sequence Length = 212387 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 agagagaaggaggagaaaaa 256 |||||||||||||||||||| Sbjct: 117722 agagagaaggaggagaaaaa 117703
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 326 tgagaagaagcaaaagaagaaggc 349 |||||||||||| ||||||||||| Sbjct: 140053 tgagaagaagcagaagaagaaggc 140076
>gb|AC147360.5| Mus musculus BAC clone RP24-241D11 from chromosome 12, complete sequence Length = 160968 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 agaagaagcaaaagaagaag 347 |||||||||||||||||||| Sbjct: 140094 agaagaagcaaaagaagaag 140075
>gb|AC168048.3| Mus musculus BAC clone RP24-335I13 from chromosome 16, complete sequence Length = 163057 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 aagagagaaggaggagaaaa 255 |||||||||||||||||||| Sbjct: 117635 aagagagaaggaggagaaaa 117616
>emb|AL844871.11| Mouse DNA sequence from clone RP23-271B15 on chromosome 2, complete sequence Length = 179754 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 aaagtgagaagaagcaaaag 341 |||||||||||||||||||| Sbjct: 26519 aaagtgagaagaagcaaaag 26500
>emb|AL590389.8| Mouse DNA sequence from clone RP23-393F23 on chromosome 2, complete sequence Length = 207901 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ctgtcagggacactctgctc 41 |||||||||||||||||||| Sbjct: 51687 ctgtcagggacactctgctc 51706
>emb|AL732478.7| Mouse DNA sequence from clone RP23-42N14 on chromosome 2, complete sequence Length = 203434 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 agaaggaggagaaaaagctc 260 |||||||||||||||||||| Sbjct: 189757 agaaggaggagaaaaagctc 189738
>emb|AL732454.12| Mouse DNA sequence from clone RP23-289P8 on chromosome X, complete sequence Length = 179447 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 aagagagaaggaggagaaaa 255 |||||||||||||||||||| Sbjct: 173213 aagagagaaggaggagaaaa 173232
>gb|AY130758.1| Caenorhabditis elegans titin locus, complete sequence Length = 126899 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 agaagaagcaaaagaagaag 347 |||||||||||||||||||| Sbjct: 94213 agaagaagcaaaagaagaag 94232
>gb|L14320.1|HSBBICP4A Bovine herpesvirus type 1 early-intermediate transcription control protein (BICP4) gene, complete cds Length = 8113 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 gcgcgcggccccggcggcgc 94 |||||||||||||||||||| Sbjct: 5114 gcgcgcggccccggcggcgc 5133
>gb|L14321.1|HSBBICP4B Bovine herpesvirus type 1 immedidate-early transcriptional control protein (BICP4) gene, 5' end Length = 2764 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 gcgcgcggccccggcggcgc 94 |||||||||||||||||||| Sbjct: 2362 gcgcgcggccccggcggcgc 2381
>dbj|AP003351.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1184D12 Length = 176854 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 aagagagaaggaggagaaaa 255 |||||||||||||||||||| Sbjct: 114143 aagagagaaggaggagaaaa 114124
>dbj|AB055810.1| Clostridium perfringens rpoB, rpoC, ybxF, rpsL genes, complete and partial cds Length = 7827 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 ggaggagaaaaagctcaagg 264 |||||||||||||||||||| Sbjct: 7056 ggaggagaaaaagctcaagg 7075 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,646,445 Number of Sequences: 3902068 Number of extensions: 4646445 Number of successful extensions: 138648 Number of sequences better than 10.0: 195 Number of HSP's better than 10.0 without gapping: 200 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 137030 Number of HSP's gapped (non-prelim): 1618 length of query: 413 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 391 effective length of database: 17,147,199,772 effective search space: 6704555110852 effective search space used: 6704555110852 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
