ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl45d02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478770.1| Oryza sativa (japonica cultivar-group), mRNA 329 4e-87
2dbj|AK100076.1| Oryza sativa (japonica cultivar-group) cDNA clon... 329 4e-87
3ref|XM_478769.1| Oryza sativa (japonica cultivar-group), mRNA 254 2e-64
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 135 1e-28
5dbj|AP003981.3| Oryza sativa (japonica cultivar-group) genomic D... 135 1e-28
6dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic D... 127 3e-26
7gb|AY022725.1| Oryza sativa microsatellite MRG5050 containing (C... 103 5e-19
8dbj|AK100383.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 7e-18
9dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
10dbj|AP003224.3| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
11ref|XM_463460.1| Oryza sativa (japonica cultivar-group), predic... 96 1e-16
12ref|XM_463457.1| Oryza sativa (japonica cultivar-group), predic... 80 7e-12
13gb|AY035059.1| Arabidopsis thaliana At3g57470 mRNA sequence 58 2e-05
14ref|NM_115607.2| Arabidopsis thaliana metalloendopeptidase AT3G5... 50 0.006
15dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
16emb|BX823565.1|CNS0A4WF Arabidopsis thaliana Full-length cDNA Co... 50 0.006
17dbj|AP005966.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
18dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 46 0.094
19ref|XM_463353.1| Oryza sativa (japonica cultivar-group), predic... 44 0.37
20dbj|AP003332.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.37
21gb|AC153379.1| Mus musculus 10 BAC RP23-230J20 (Roswell Park Can... 44 0.37
22ref|XM_465184.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.5
23ref|NM_183989.1| Oryza sativa (japonica cultivar-group), predic... 42 1.5
24gb|AC150654.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
25gb|AC147925.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
26gb|AC092173.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
27gb|AC137612.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
28gb|AC109646.6| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
29gb|AC137615.2| Genomic sequence for Oryza sativa, Nipponbare str... 42 1.5
30emb|AL731581.2|OSJN00228 Oryza sativa genomic DNA, chromosome 4,... 42 1.5
31emb|AL133248.1|ATT8H10 Arabidopsis thaliana DNA chromosome 3, BA... 42 1.5
32gb|AC083944.8| Genomic sequence for Oryza sativa, Nipponbare str... 42 1.5
33dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
34dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
35dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
36dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
37dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
38dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
39dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
40dbj|AP003205.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
41dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
42dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
43dbj|AP004735.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
44dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
45dbj|AP004692.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
46dbj|AP005476.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
47dbj|AP006532.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
48tpe|BN000542.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 42 1.5
49dbj|AP005503.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
50gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
51gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
52gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
53emb|AL732650.5|CNS08C9P Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.5
54emb|AL732649.3|CNS08C9O Oryza sativa chromosome 12, . BAC OSJNBb... 42 1.5
55gb|AC163661.4| Mus musculus BAC clone RP23-288B18 from chromosom... 40 5.8
56gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, c... 40 5.8
57gb|AC103376.7| Mus musculus chromosome 8, clone RP24-226P5, comp... 40 5.8
58gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 5.8
59ref|XM_842923.1| Leishmania major strain Friedlin hypothetical p... 40 5.8
60ref|XM_756964.1| Ustilago maydis 521 hypothetical protein (UM059... 40 5.8
61gb|AC121926.3| Mus musculus BAC clone RP24-202B3 from chromosome... 40 5.8
62emb|Z83840.7|HS216E10 Human DNA sequence from clone CTA-216E10 o... 40 5.8
63gb|AC163098.4| Mus musculus chromosome 19, clone RP23-262J17, co... 40 5.8
64emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 5.8
65emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome... 40 5.8
66emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 5.8
67gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome 40 5.8
68gb|AF078737.1|AF078737 Caldicellulosiruptor sp. Tok7B.1 XynA (xy... 40 5.8
69dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 5.8
70gb|AC120557.12| Mus musculus chromosome 19, clone RP24-493E6, co... 40 5.8
71emb|BX000508.1|CNS08CDY Oryza sativa chromosome 12, . BAC OJ1575... 40 5.8
72emb|AL845479.8| Mouse DNA sequence from clone RP23-232N20 on chr... 40 5.8 
>ref|XM_478770.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3199

 Score =  329 bits (166), Expect = 4e-87
 Identities = 235/258 (91%)
 Strand = Plus / Plus

                                                                       
Query: 173 tcaccaagccccgcaacgacaggcgcgggtaccgccgcgtggtgctcccgaatgccctgg 232
           |||||| ||| |||||||||| |||||||||||||||||| |||||||| || | ||| |
Sbjct: 233 tcaccaggccacgcaacgacaagcgcgggtaccgccgcgtcgtgctccccaacgacctcg 292

                                                                       
Query: 233 agtgcctcctcatcagcgaccccgacaccgacaaggcggcggcgtcgatgaatgtctcgg 292
           ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 293 agtgcctcctcgtcagcgaccccgacaccgacaaggcggcggcgtcgatgaacgtctcgg 352

                                                                       
Query: 293 tggggtacttctgcgatcccgatgggatggaggggctcgcgcacttcctcgagcatatgc 352
           |||| ||||||||||||||||| ||| | |||||||||||||||||||| ||||||||||
Sbjct: 353 tgggctacttctgcgatcccgaggggctcgaggggctcgcgcacttccttgagcatatgc 412

                                                                       
Query: 353 ttttctacgcgagtgaaaaatatccaatagaagacagttactcaaagtacatcgcagagc 412
           ||||||| || ||||| |||||||| ||||||||||||||||| ||||| ||  ||||||
Sbjct: 413 ttttctatgctagtgagaaatatcctatagaagacagttactccaagtatattacagagc 472

                             
Query: 413 atggtggttcaaccaatg 430
           ||||||||||||||||||
Sbjct: 473 atggtggttcaaccaatg 490
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>dbj|AK100076.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001F09, full
           insert sequence
          Length = 3200

 Score =  329 bits (166), Expect = 4e-87
 Identities = 235/258 (91%)
 Strand = Plus / Plus

                                                                       
Query: 173 tcaccaagccccgcaacgacaggcgcgggtaccgccgcgtggtgctcccgaatgccctgg 232
           |||||| ||| |||||||||| |||||||||||||||||| |||||||| || | ||| |
Sbjct: 233 tcaccaggccacgcaacgacaagcgcgggtaccgccgcgtcgtgctccccaacgacctcg 292

                                                                       
Query: 233 agtgcctcctcatcagcgaccccgacaccgacaaggcggcggcgtcgatgaatgtctcgg 292
           ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 293 agtgcctcctcgtcagcgaccccgacaccgacaaggcggcggcgtcgatgaacgtctcgg 352

                                                                       
Query: 293 tggggtacttctgcgatcccgatgggatggaggggctcgcgcacttcctcgagcatatgc 352
           |||| ||||||||||||||||| ||| | |||||||||||||||||||| ||||||||||
Sbjct: 353 tgggctacttctgcgatcccgaggggctcgaggggctcgcgcacttccttgagcatatgc 412

                                                                       
Query: 353 ttttctacgcgagtgaaaaatatccaatagaagacagttactcaaagtacatcgcagagc 412
           ||||||| || ||||| |||||||| ||||||||||||||||| ||||| ||  ||||||
Sbjct: 413 ttttctatgctagtgagaaatatcctatagaagacagttactccaagtatattacagagc 472

                             
Query: 413 atggtggttcaaccaatg 430
           ||||||||||||||||||
Sbjct: 473 atggtggttcaaccaatg 490
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>ref|XM_478769.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2997

 Score =  254 bits (128), Expect = 2e-64
 Identities = 224/256 (87%)
 Strand = Plus / Plus

                                                                       
Query: 173 tcaccaagccccgcaacgacaggcgcgggtaccgccgcgtggtgctcccgaatgccctgg 232
           |||||| |||||||||||||| |||||||||||||||||| |||||||| || ||||| |
Sbjct: 119 tcaccaggccccgcaacgacaagcgcgggtaccgccgcgtcgtgctccccaacgccctcg 178

                                                                       
Query: 233 agtgcctcctcatcagcgaccccgacaccgacaaggcggcggcgtcgatgaatgtctcgg 292
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 agtgcctcctcgtcagcgaccccgacaccgacaaggcggcggcgtcgatgaatgtctcgg 238

                                                                       
Query: 293 tggggtacttctgcgatcccgatgggatggaggggctcgcgcacttcctcgagcatatgc 352
           |||| |||||||||||||||||  || |    || || || || ||||| ||||||||||
Sbjct: 239 tgggctacttctgcgatcccgagaggctccctggccttgcacatttccttgagcatatgc 298

                                                                       
Query: 353 ttttctacgcgagtgaaaaatatccaatagaagacagttactcaaagtacatcgcagagc 412
           ||||||| || || || ||||| ||  | ||||||  |||||||||||| || |||||||
Sbjct: 299 ttttctatgctagcgagaaataccctgtggaagacgattactcaaagtatattgcagagc 358

                           
Query: 413 atggtggttcaaccaa 428
           ||||||||||||||||
Sbjct: 359 atggtggttcaaccaa 374
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  135 bits (68), Expect = 1e-28
 Identities = 89/96 (92%)
 Strand = Plus / Minus

                                                                            
Query: 173      tcaccaagccccgcaacgacaggcgcgggtaccgccgcgtggtgctcccgaatgccctgg 232
                |||||| |||||||||||||| |||||||||||||||||| |||||||| || ||||| |
Sbjct: 22901097 tcaccaggccccgcaacgacaagcgcgggtaccgccgcgtcgtgctccccaacgccctcg 22901038

                                                    
Query: 233      agtgcctcctcatcagcgaccccgacaccgacaagg 268
                ||||||||||| ||||||||||||||||||||||||
Sbjct: 22901037 agtgcctcctcgtcagcgaccccgacaccgacaagg 22901002



 Score =  127 bits (64), Expect = 3e-26
 Identities = 88/96 (91%)
 Strand = Plus / Minus

                                                                            
Query: 173      tcaccaagccccgcaacgacaggcgcgggtaccgccgcgtggtgctcccgaatgccctgg 232
                |||| |||||||||||||||| |||||||||||||||||| |||||||| || ||||| |
Sbjct: 22937417 tcacgaagccccgcaacgacaagcgcgggtaccgccgcgtcgtgctccccaacgccctcg 22937358

                                                    
Query: 233      agtgcctcctcatcagcgaccccgacaccgacaagg 268
                |||||||| |||||||||||||||||||||| ||||
Sbjct: 22937357 agtgcctcgtcatcagcgaccccgacaccgataagg 22937322



 Score =  119 bits (60), Expect = 8e-24
 Identities = 87/96 (90%)
 Strand = Plus / Minus

                                                                            
Query: 173      tcaccaagccccgcaacgacaggcgcgggtaccgccgcgtggtgctcccgaatgccctgg 232
                |||||| ||| |||||||||| |||||||||||||||||| |||||||| || | ||| |
Sbjct: 22918861 tcaccaggccacgcaacgacaagcgcgggtaccgccgcgtcgtgctccccaacgacctcg 22918802

                                                    
Query: 233      agtgcctcctcatcagcgaccccgacaccgacaagg 268
                ||||||||||| ||||||||||||||||||||||||
Sbjct: 22918801 agtgcctcctcgtcagcgaccccgacaccgacaagg 22918766



 Score =  111 bits (56), Expect = 2e-21
 Identities = 71/76 (93%)
 Strand = Plus / Minus

                                                                            
Query: 266      aggcggcggcgtcgatgaatgtctcggtggggtacttctgcgatcccgatgggatggagg 325
                ||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| | ||||
Sbjct: 22918649 aggcggcggcgtcgatgaacgtctcggtgggctacttctgcgatcccgaggggctcgagg 22918590

                                
Query: 326      ggctcgcgcacttcct 341
                ||||||||||||||||
Sbjct: 22918589 ggctcgcgcacttcct 22918574



 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 48/49 (97%)
 Strand = Plus / Minus

                                                                 
Query: 266      aggcggcggcgtcgatgaatgtctcggtggggtacttctgcgatcccga 314
                ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 22900894 aggcggcggcgtcgatgaatgtctcggtgggctacttctgcgatcccga 22900846



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Minus

                                                                            
Query: 343      gagcatatgcttttctacgcgagtgaaaaatatccaatagaagacagttactcaaagtac 402
                ||||||||||||||||| || || || |||||||| ||||||||||||||||||||||| 
Sbjct: 22935662 gagcatatgcttttctatgctagcgagaaatatcctatagaagacagttactcaaagtat 22935603

                         
Query: 403      atcgcagag 411
                || ||||||
Sbjct: 22935602 attgcagag 22935594



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                           
Query: 343      gagcatatgcttttctacgcgagtgaaaaatatccaatagaagacagttactcaaagta 401
                ||||||||||||||||| || ||||| |||||||| ||||||||||||||||| |||||
Sbjct: 22916634 gagcatatgcttttctatgctagtgagaaatatcctatagaagacagttactccaagta 22916576



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                                 
Query: 266      aggcggcggcgtcgatgaatgtctcggtggggtacttctgcgatcccga 314
                ||||||||||||||||||| |||||||| || ||||||||||| |||||
Sbjct: 22937223 aggcggcggcgtcgatgaacgtctcggtaggctacttctgcgaccccga 22937175



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 410      agcatggtggttcaaccaatg 430
                |||||||||||||||||||||
Sbjct: 22915918 agcatggtggttcaaccaatg 22915898



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                            
Query: 343      gagcatatgcttttctacgcgagtgaaaaatatccaatagaagacagttactcaaagtac 402
                ||||||||||||||||| || || || ||||| ||  | ||||||  |||||||||||| 
Sbjct: 22899442 gagcatatgcttttctatgctagcgagaaataccctgtggaagacgattactcaaagtat 22899383

                         
Query: 403      atcgcagag 411
                || ||||||
Sbjct: 22899382 attgcagag 22899374
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>dbj|AP003981.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1019_E02
          Length = 121607

 Score =  135 bits (68), Expect = 1e-28
 Identities = 89/96 (92%)
 Strand = Plus / Minus

                                                                         
Query: 173   tcaccaagccccgcaacgacaggcgcgggtaccgccgcgtggtgctcccgaatgccctgg 232
             |||||| |||||||||||||| |||||||||||||||||| |||||||| || ||||| |
Sbjct: 94364 tcaccaggccccgcaacgacaagcgcgggtaccgccgcgtcgtgctccccaacgccctcg 94305

                                                 
Query: 233   agtgcctcctcatcagcgaccccgacaccgacaagg 268
             ||||||||||| ||||||||||||||||||||||||
Sbjct: 94304 agtgcctcctcgtcagcgaccccgacaccgacaagg 94269



 Score =  119 bits (60), Expect = 8e-24
 Identities = 87/96 (90%)
 Strand = Plus / Minus

                                                                          
Query: 173    tcaccaagccccgcaacgacaggcgcgggtaccgccgcgtggtgctcccgaatgccctgg 232
              |||||| ||| |||||||||| |||||||||||||||||| |||||||| || | ||| |
Sbjct: 112128 tcaccaggccacgcaacgacaagcgcgggtaccgccgcgtcgtgctccccaacgacctcg 112069

                                                  
Query: 233    agtgcctcctcatcagcgaccccgacaccgacaagg 268
              ||||||||||| ||||||||||||||||||||||||
Sbjct: 112068 agtgcctcctcgtcagcgaccccgacaccgacaagg 112033



 Score =  111 bits (56), Expect = 2e-21
 Identities = 71/76 (93%)
 Strand = Plus / Minus

                                                                          
Query: 266    aggcggcggcgtcgatgaatgtctcggtggggtacttctgcgatcccgatgggatggagg 325
              ||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| | ||||
Sbjct: 111916 aggcggcggcgtcgatgaacgtctcggtgggctacttctgcgatcccgaggggctcgagg 111857

                              
Query: 326    ggctcgcgcacttcct 341
              ||||||||||||||||
Sbjct: 111856 ggctcgcgcacttcct 111841



 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 48/49 (97%)
 Strand = Plus / Minus

                                                              
Query: 266   aggcggcggcgtcgatgaatgtctcggtggggtacttctgcgatcccga 314
             ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 94161 aggcggcggcgtcgatgaatgtctcggtgggctacttctgcgatcccga 94113



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                         
Query: 343    gagcatatgcttttctacgcgagtgaaaaatatccaatagaagacagttactcaaagta 401
              ||||||||||||||||| || ||||| |||||||| ||||||||||||||||| |||||
Sbjct: 109901 gagcatatgcttttctatgctagtgagaaatatcctatagaagacagttactccaagta 109843



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 410    agcatggtggttcaaccaatg 430
              |||||||||||||||||||||
Sbjct: 109185 agcatggtggttcaaccaatg 109165



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                         
Query: 343   gagcatatgcttttctacgcgagtgaaaaatatccaatagaagacagttactcaaagtac 402
             ||||||||||||||||| || || || ||||| ||  | ||||||  |||||||||||| 
Sbjct: 92709 gagcatatgcttttctatgctagcgagaaataccctgtggaagacgattactcaaagtat 92650

                      
Query: 403   atcgcagag 411
             || ||||||
Sbjct: 92649 attgcagag 92641
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>dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1121_A05
          Length = 172668

 Score =  127 bits (64), Expect = 3e-26
 Identities = 88/96 (91%)
 Strand = Plus / Minus

                                                                         
Query: 173   tcaccaagccccgcaacgacaggcgcgggtaccgccgcgtggtgctcccgaatgccctgg 232
             |||| |||||||||||||||| |||||||||||||||||| |||||||| || ||||| |
Sbjct: 12631 tcacgaagccccgcaacgacaagcgcgggtaccgccgcgtcgtgctccccaacgccctcg 12572

                                                 
Query: 233   agtgcctcctcatcagcgaccccgacaccgacaagg 268
             |||||||| |||||||||||||||||||||| ||||
Sbjct: 12571 agtgcctcgtcatcagcgaccccgacaccgataagg 12536



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Minus

                                                                         
Query: 343   gagcatatgcttttctacgcgagtgaaaaatatccaatagaagacagttactcaaagtac 402
             ||||||||||||||||| || || || |||||||| ||||||||||||||||||||||| 
Sbjct: 10876 gagcatatgcttttctatgctagcgagaaatatcctatagaagacagttactcaaagtat 10817

                      
Query: 403   atcgcagag 411
             || ||||||
Sbjct: 10816 attgcagag 10808



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                              
Query: 266   aggcggcggcgtcgatgaatgtctcggtggggtacttctgcgatcccga 314
             ||||||||||||||||||| |||||||| || ||||||||||| |||||
Sbjct: 12437 aggcggcggcgtcgatgaacgtctcggtaggctacttctgcgaccccga 12389
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>gb|AY022725.1| Oryza sativa microsatellite MRG5050 containing (CCG)X10, closest to
           marker R2561, genomic sequence
          Length = 230

 Score =  103 bits (52), Expect = 5e-19
 Identities = 79/88 (89%)
 Strand = Plus / Minus

                                                                       
Query: 173 tcaccaagccccgcaacgacaggcgcgggtaccgccgcgtggtgctcccgaatgccctgg 232
           |||||| ||| |||||||||| |||||||||||||||||| |||||||| || | ||| |
Sbjct: 88  tcaccaggccacgcaacgacaagcgcgggtaccgccgcgtcgtgctccccaacgacctcg 29

                                       
Query: 233 agtgcctcctcatcagcgaccccgacac 260
           ||||||||||| ||||||||||||||||
Sbjct: 28  agtgcctcctcgtcagcgaccccgacac 1
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>dbj|AK100383.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023085G23, full
           insert sequence
          Length = 3262

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 143/174 (82%)
 Strand = Plus / Plus

                                                                       
Query: 201 gtaccgccgcgtggtgctcccgaatgccctggagtgcctcctcatcagcgaccccgacac 260
           ||||||||| ||||||||||| || || || ||||||||||||||||||||| |||| ||
Sbjct: 198 gtaccgccgggtggtgctccccaacgcgctcgagtgcctcctcatcagcgactccgaaac 257

                                                                       
Query: 261 cgacaaggcggcggcgtcgatgaatgtctcggtggggtacttctgcgatcccgatgggat 320
           |||||||||||||||||  ||| | ||    ||||| |  ||| |||| || || ||| |
Sbjct: 258 cgacaaggcggcggcgtgtatggaggttggcgtgggctcgttcagcgacccggaggggct 317

                                                                 
Query: 321 ggaggggctcgcgcacttcctcgagcatatgcttttctacgcgagtgaaaaata 374
            ||||| ||||| |||||||||||||||||||| || || || ||||| |||||
Sbjct: 318 cgagggcctcgcccacttcctcgagcatatgctattttatgccagtgagaaata 371
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 76/85 (89%)
 Strand = Plus / Plus

                                                                            
Query: 184      cgcaacgacaggcgcgggtaccgccgcgtggtgctcccgaatgccctggagtgcctcctc 243
                |||| ||||| ||| | ||||||||| ||||||||||| ||||| || ||||||||||||
Sbjct: 32978351 cgcagcgacaagcgggagtaccgccgggtggtgctccccaatgcgctcgagtgcctcctc 32978410

                                         
Query: 244      atcagcgaccccgacaccgacaagg 268
                ||||||||| |||||||||||||||
Sbjct: 32978411 atcagcgactccgacaccgacaagg 32978435



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 61/68 (89%)
 Strand = Plus / Plus

                                                                            
Query: 201      gtaccgccgcgtggtgctcccgaatgccctggagtgcctcctcatcagcgaccccgacac 260
                ||||||||| ||||||||||| || || || ||||||||||||||||||||| |||| ||
Sbjct: 32958823 gtaccgccgggtggtgctccccaacgcgctcgagtgcctcctcatcagcgactccgaaac 32958882

                        
Query: 261      cgacaagg 268
                ||||||||
Sbjct: 32958883 cgacaagg 32958890



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 61       cgacgacgactgggcggcgacg 82
                ||||||||||||||||||||||
Sbjct: 22542773 cgacgacgactgggcggcgacg 22542752



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 49       ctcccctagcgacgacgacgactgg 73
                |||||| ||||||||||||||||||
Sbjct: 13748118 ctccccgagcgacgacgacgactgg 13748142



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 49       ctcccctagcgacgacgacgactgg 73
                |||||| ||||||||||||||||||
Sbjct: 12499473 ctccccgagcgacgacgacgactgg 12499497
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>dbj|AP003224.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0010B10
          Length = 155263

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 76/85 (89%)
 Strand = Plus / Plus

                                                                         
Query: 184   cgcaacgacaggcgcgggtaccgccgcgtggtgctcccgaatgccctggagtgcctcctc 243
             |||| ||||| ||| | ||||||||| ||||||||||| ||||| || ||||||||||||
Sbjct: 44579 cgcagcgacaagcgggagtaccgccgggtggtgctccccaatgcgctcgagtgcctcctc 44638

                                      
Query: 244   atcagcgaccccgacaccgacaagg 268
             ||||||||| |||||||||||||||
Sbjct: 44639 atcagcgactccgacaccgacaagg 44663



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 61/68 (89%)
 Strand = Plus / Plus

                                                                         
Query: 201   gtaccgccgcgtggtgctcccgaatgccctggagtgcctcctcatcagcgaccccgacac 260
             ||||||||| ||||||||||| || || || ||||||||||||||||||||| |||| ||
Sbjct: 25051 gtaccgccgggtggtgctccccaacgcgctcgagtgcctcctcatcagcgactccgaaac 25110

                     
Query: 261   cgacaagg 268
             ||||||||
Sbjct: 25111 cgacaagg 25118
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>ref|XM_463460.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2838

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 75/84 (89%)
 Strand = Plus / Plus

                                                                       
Query: 184 cgcaacgacaggcgcgggtaccgccgcgtggtgctcccgaatgccctggagtgcctcctc 243
           |||| ||||| ||| | ||||||||| ||||||||||| ||||| || ||||||||||||
Sbjct: 46  cgcagcgacaagcgggagtaccgccgggtggtgctccccaatgcgctcgagtgcctcctc 105

                                   
Query: 244 atcagcgaccccgacaccgacaag 267
           ||||||||| ||||||||||||||
Sbjct: 106 atcagcgactccgacaccgacaag 129
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>ref|XM_463457.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2841

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 61/68 (89%)
 Strand = Plus / Plus

                                                                       
Query: 201 gtaccgccgcgtggtgctcccgaatgccctggagtgcctcctcatcagcgaccccgacac 260
           ||||||||| ||||||||||| || || || ||||||||||||||||||||| |||| ||
Sbjct: 75  gtaccgccgggtggtgctccccaacgcgctcgagtgcctcctcatcagcgactccgaaac 134

                   
Query: 261 cgacaagg 268
           ||||||||
Sbjct: 135 cgacaagg 142



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 322 gaggggctcgcgcacttcctcgagcatatgcttttctacgcgagtgaaaaata 374
           ||||| ||||| |||||||||||||||||||| || || || ||||| |||||
Sbjct: 256 gagggcctcgcccacttcctcgagcatatgctattttatgccagtgagaaata 308
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>gb|AY035059.1| Arabidopsis thaliana At3g57470 mRNA sequence
          Length = 3270

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 80/97 (82%)
 Strand = Plus / Plus

                                                                       
Query: 320 tggaggggctcgcgcacttcctcgagcatatgcttttctacgcgagtgaaaaatatccaa 379
           |||| ||||| || || ||||| ||||||||||| || || || ||||||||||| ||  
Sbjct: 324 tggaagggctagctcatttccttgagcatatgctgttttatgcaagtgaaaaataccctg 383

                                                
Query: 380 tagaagacagttactcaaagtacatcgcagagcatgg 416
             ||||| |||||||| ||||||||| ||||||||||
Sbjct: 384 aggaagatagttactccaagtacatcacagagcatgg 420
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>ref|NM_115607.2| Arabidopsis thaliana metalloendopeptidase AT3G57470 mRNA, complete
           cds
          Length = 3179

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 61/73 (83%)
 Strand = Plus / Plus

                                                                       
Query: 344 agcatatgcttttctacgcgagtgaaaaatatccaatagaagacagttactcaaagtaca 403
           |||||||||| || || || ||||||||||| ||    ||||| |||||||| |||||||
Sbjct: 354 agcatatgctgttttatgcaagtgaaaaataccctgaggaagatagttactccaagtaca 413

                        
Query: 404 tcgcagagcatgg 416
           || ||||||||||
Sbjct: 414 tcacagagcatgg 426
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                         
Query: 58       cgacgacgacgactgggcggcgacg 82
                |||||||||||||||||||||||||
Sbjct: 22688752 cgacgacgacgactgggcggcgacg 22688776



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 49       ctcccctagcgacgacgacgactgg 73
                |||||| ||||||||||||||||||
Sbjct: 15954093 ctccccgagcgacgacgacgactgg 15954069
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>emb|BX823565.1|CNS0A4WF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS51ZC05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 3174

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 61/73 (83%)
 Strand = Plus / Plus

                                                                       
Query: 344 agcatatgcttttctacgcgagtgaaaaatatccaatagaagacagttactcaaagtaca 403
           |||||||||| || || || ||||||||||| ||    ||||| |||||||| |||||||
Sbjct: 357 agcatatgctgttttatgcaagtgaaaaataccctgaggaagatagttactccaagtaca 416

                        
Query: 404 tcgcagagcatgg 416
           || ||||||||||
Sbjct: 417 tcacagagcatgg 429
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>dbj|AP005966.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:B1047H05
          Length = 187273

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                       
Query: 58     cgacgacgacgactgggcggcgacg 82
              |||||||||||||||||||||||||
Sbjct: 154161 cgacgacgacgactgggcggcgacg 154185
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 46.1 bits (23), Expect = 0.094
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 325     gggctcgcgcacttcctcgagca 347
               |||||||||||||||||||||||
Sbjct: 8220555 gggctcgcgcacttcctcgagca 8220577
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>ref|XM_463353.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 600

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 61  cgacgacgactgggcggcgacg 82
           ||||||||||||||||||||||
Sbjct: 430 cgacgacgactgggcggcgacg 409
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>dbj|AP003332.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1097D05
          Length = 144879

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 61    cgacgacgactgggcggcgacg 82
             ||||||||||||||||||||||
Sbjct: 58510 cgacgacgactgggcggcgacg 58489
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>gb|AC153379.1| Mus musculus 10 BAC RP23-230J20 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 174195

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 3     gacttgacctcccccaaccccc 24
             ||||||||||||||||||||||
Sbjct: 98262 gacttgacctcccccaaccccc 98283
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>ref|XM_465184.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 324

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 49  ctcccctagcgacgacgacgactgg 73
           |||||| ||||||||||||||||||
Sbjct: 237 ctccccaagcgacgacgacgactgg 261
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>ref|NM_183989.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2013

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 49  ctcccctagcgacgacgacgactgg 73
           |||||| ||||||||||||||||||
Sbjct: 444 ctccccgagcgacgacgacgactgg 468
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>gb|AC150654.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0094L06, complete sequence
          Length = 189328

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 49    ctcccctagcgacgacgacgactgg 73
             |||||| ||||||||||||||||||
Sbjct: 95802 ctccccgagcgacgacgacgactgg 95778



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 49    ctcccctagcgacgacgacgactgg 73
             |||||| ||||||||||||||||||
Sbjct: 30177 ctccccgagcgacgacgacgactgg 30153
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>gb|AC147925.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0032N11 map near 50283S, complete sequence
          Length = 139217

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 49    ctcccctagcgacgacgacgactgg 73
             |||||| ||||||||||||||||||
Sbjct: 62818 ctccccgagcgacgacgacgactgg 62842
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>gb|AC092173.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0095J15, complete sequence
          Length = 156023

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 49    ctcccctagcgacgacgacgactgg 73
             |||||| ||||||||||||||||||
Sbjct: 19275 ctccccgagcgacgacgacgactgg 19251
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>gb|AC137612.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0022B03,
              complete sequence
          Length = 151814

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 49     ctcccctagcgacgacgacgactgg 73
              |||||| ||||||||||||||||||
Sbjct: 137049 ctccccgagcgacgacgacgactgg 137025
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>gb|AC109646.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0017K22,
              complete sequence
          Length = 176399

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 49     ctcccctagcgacgacgacgactgg 73
              |||||| ||||||||||||||||||
Sbjct: 164697 ctccccgagcgacgacgacgactgg 164673



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 49    ctcccctagcgacgacgacgactgg 73
             |||||| ||||||||||||||||||
Sbjct: 99073 ctccccgagcgacgacgacgactgg 99049
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>gb|AC137615.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0053F13, from chromosome 5, complete sequence
          Length = 149538

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 49    ctcccctagcgacgacgacgactgg 73
             |||||| ||||||||||||||||||
Sbjct: 51627 ctccccgagcgacgacgacgactgg 51603
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>emb|AL731581.2|OSJN00228 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0022F16,
             complete sequence
          Length = 154397

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 49    ctcccctagcgacgacgacgactgg 73
             |||||| ||||||||||||||||||
Sbjct: 92837 ctccccgagcgacgacgacgactgg 92813
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>emb|AL133248.1|ATT8H10 Arabidopsis thaliana DNA chromosome 3, BAC clone T8H10
          Length = 87503

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                         
Query: 343   gagcatatgcttttctacgcgagtgaaaaatatccaatagaagacagttactcaaagtac 402
             ||||||||||| || || || ||||||||||| ||    ||||| |||||||| ||||||
Sbjct: 29242 gagcatatgctgttttatgcaagtgaaaaataccctgaggaagatagttactccaagtac 29183

                      
Query: 403   atcgcagag 411
             ||| |||||
Sbjct: 29182 atcacagag 29174
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>gb|AC083944.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0047G15, from chromosome 10, complete sequence
          Length = 166474

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 49     ctcccctagcgacgacgacgactgg 73
              |||||| ||||||||||||||||||
Sbjct: 152805 ctccccgagcgacgacgacgactgg 152781
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 49      ctcccctagcgacgacgacgactgg 73
               |||||| ||||||||||||||||||
Sbjct: 3983522 ctccccgagcgacgacgacgactgg 3983498
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 49       ctcccctagcgacgacgacgactgg 73
                |||||| ||||||||||||||||||
Sbjct: 11445080 ctccccgagcgacgacgacgactgg 11445056



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 49      ctcccctagcgacgacgacgactgg 73
               |||||| ||||||||||||||||||
Sbjct: 6403106 ctccccgagcgacgacgacgactgg 6403082



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 50      tcccctagcgacgacgacgactgg 73
               ||||| ||||||||||||||||||
Sbjct: 1628056 tccccgagcgacgacgacgactgg 1628079
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 49       ctcccctagcgacgacgacgactgg 73
                |||||| ||||||||||||||||||
Sbjct: 16110007 ctccccgagcgacgacgacgactgg 16109983



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 49       ctcccctagcgacgacgacgactgg 73
                |||||| ||||||||||||||||||
Sbjct: 16044383 ctccccgagcgacgacgacgactgg 16044359



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 49       ctcccctagcgacgacgacgactgg 73
                |||||| ||||||||||||||||||
Sbjct: 14447984 ctccccgagcgacgacgacgactgg 14448008
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 49      ctcccctagcgacgacgacgactgg 73
               |||||| ||||||||||||||||||
Sbjct: 5147504 ctccccgagcgacgacgacgactgg 5147480
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 49       ctcccctagcgacgacgacgactgg 73
                |||||| ||||||||||||||||||
Sbjct: 11108041 ctccccgagcgacgacgacgactgg 11108017



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 49      ctcccctagcgacgacgacgactgg 73
               |||||| ||||||||||||||||||
Sbjct: 4771413 ctccccgagcgacgacgacgactgg 4771437
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 49       ctcccctagcgacgacgacgactgg 73
                |||||| ||||||||||||||||||
Sbjct: 10151533 ctccccgagcgacgacgacgactgg 10151509
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 49       ctcccctagcgacgacgacgactgg 73
                |||||| ||||||||||||||||||
Sbjct: 12148182 ctccccaagcgacgacgacgactgg 12148158
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>dbj|AP003205.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1146B04
          Length = 145186

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 49    ctcccctagcgacgacgacgactgg 73
             |||||| ||||||||||||||||||
Sbjct: 86446 ctccccgagcgacgacgacgactgg 86470
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>dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0537A05
          Length = 152396

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 49    ctcccctagcgacgacgacgactgg 73
             |||||| ||||||||||||||||||
Sbjct: 11083 ctccccgagcgacgacgacgactgg 11107
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>dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1135C02
          Length = 152306

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 49    ctcccctagcgacgacgacgactgg 73
             |||||| ||||||||||||||||||
Sbjct: 85088 ctccccgagcgacgacgacgactgg 85112
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>dbj|AP004735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0031P18
          Length = 156535

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 49    ctcccctagcgacgacgacgactgg 73
             |||||| ||||||||||||||||||
Sbjct: 87542 ctccccgagcgacgacgacgactgg 87518
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>dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0026P23
          Length = 180188

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 49     ctcccctagcgacgacgacgactgg 73
              |||||| ||||||||||||||||||
Sbjct: 167096 ctccccgagcgacgacgacgactgg 167072
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>dbj|AP004692.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0455A11
          Length = 158629

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 49     ctcccctagcgacgacgacgactgg 73
              |||||| ||||||||||||||||||
Sbjct: 129429 ctccccgagcgacgacgacgactgg 129453
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>dbj|AP005476.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0026D20
          Length = 130634

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 49    ctcccctagcgacgacgacgactgg 73
             |||||| ||||||||||||||||||
Sbjct: 96487 ctccccaagcgacgacgacgactgg 96463
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>dbj|AP006532.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1446H11
          Length = 135488

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 49    ctcccctagcgacgacgacgactgg 73
             |||||| ||||||||||||||||||
Sbjct: 78647 ctccccgagcgacgacgacgactgg 78623
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>tpe|BN000542.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx13 gene for
            class III peroxidase 13 precursor, exons 1-3
          Length = 9315

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 49   ctcccctagcgacgacgacgactgg 73
            |||||| ||||||||||||||||||
Sbjct: 6972 ctccccgagcgacgacgacgactgg 6996
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>dbj|AP005503.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0560B10, complete sequence
          Length = 108295

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 49    ctcccctagcgacgacgacgactgg 73
             |||||| ||||||||||||||||||
Sbjct: 66557 ctccccgagcgacgacgacgactgg 66533
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 49      ctcccctagcgacgacgacgactgg 73
               |||||| ||||||||||||||||||
Sbjct: 5148291 ctccccgagcgacgacgacgactgg 5148267
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 49       ctcccctagcgacgacgacgactgg 73
                |||||| ||||||||||||||||||
Sbjct: 16200029 ctccccgagcgacgacgacgactgg 16200005



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 49       ctcccctagcgacgacgacgactgg 73
                |||||| ||||||||||||||||||
Sbjct: 16137565 ctccccgagcgacgacgacgactgg 16137541



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 49       ctcccctagcgacgacgacgactgg 73
                |||||| ||||||||||||||||||
Sbjct: 14529985 ctccccgagcgacgacgacgactgg 14530009
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 49       ctcccctagcgacgacgacgactgg 73
                |||||| ||||||||||||||||||
Sbjct: 11444751 ctccccgagcgacgacgacgactgg 11444727



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 49      ctcccctagcgacgacgacgactgg 73
               |||||| ||||||||||||||||||
Sbjct: 6402981 ctccccgagcgacgacgacgactgg 6402957



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 50      tcccctagcgacgacgacgactgg 73
               ||||| ||||||||||||||||||
Sbjct: 1628036 tccccgagcgacgacgacgactgg 1628059
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>emb|AL732650.5|CNS08C9P Oryza sativa chromosome 12, . BAC OSJNBa0054O08 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 167806

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 49    ctcccctagcgacgacgacgactgg 73
             |||||| ||||||||||||||||||
Sbjct: 91884 ctccccgagcgacgacgacgactgg 91908
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>emb|AL732649.3|CNS08C9O Oryza sativa chromosome 12, . BAC OSJNBb0067N05 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 109555

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 49    ctcccctagcgacgacgacgactgg 73
             |||||| ||||||||||||||||||
Sbjct: 64654 ctccccgagcgacgacgacgactgg 64630
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>gb|AC163661.4| Mus musculus BAC clone RP23-288B18 from chromosome 10, complete sequence
          Length = 210846

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      ttgacctcccccaacccccg 25
              ||||||||||||||||||||
Sbjct: 127081 ttgacctcccccaacccccg 127062
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>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence
          Length = 1130447

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 183    ccgcaacgacaggcgcgggtaccgccgc 210
              |||||||||||||||| || ||||||||
Sbjct: 242834 ccgcaacgacaggcgcaggcaccgccgc 242807
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>gb|AC103376.7| Mus musculus chromosome 8, clone RP24-226P5, complete sequence
          Length = 165714

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 7      tgacctcccccaacccccgt 26
              ||||||||||||||||||||
Sbjct: 101072 tgacctcccccaacccccgt 101053
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 119     gcgagccggccggcggcgcc 138
               ||||||||||||||||||||
Sbjct: 1009202 gcgagccggccggcggcgcc 1009221
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>ref|XM_842923.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0318)
           partial mRNA
          Length = 1440

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 183 ccgcaacgacaggcgcgggtaccgccgc 210
           |||||||||||||||| || ||||||||
Sbjct: 658 ccgcaacgacaggcgcaggcaccgccgc 631
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>ref|XM_756964.1| Ustilago maydis 521 hypothetical protein (UM05910.1) partial mRNA
          Length = 1185

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 113 tccccagcgagccggccggc 132
           ||||||||||||||||||||
Sbjct: 620 tccccagcgagccggccggc 639
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>gb|AC121926.3| Mus musculus BAC clone RP24-202B3 from chromosome 10, complete sequence
          Length = 185398

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     ttgacctcccccaacccccg 25
             ||||||||||||||||||||
Sbjct: 52832 ttgacctcccccaacccccg 52813
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>emb|Z83840.7|HS216E10 Human DNA sequence from clone CTA-216E10 on chromosome 22, complete
             sequence
          Length = 122320

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     cttgacctcccccaaccccc 24
             ||||||||||||||||||||
Sbjct: 77805 cttgacctcccccaaccccc 77786
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>gb|AC163098.4| Mus musculus chromosome 19, clone RP23-262J17, complete sequence
          Length = 170948

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     cttgacctcccccaaccccc 24
             ||||||||||||||||||||
Sbjct: 97826 cttgacctcccccaaccccc 97845
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 64      cgacgactgggcggcgacgc 83
               ||||||||||||||||||||
Sbjct: 1372438 cgacgactgggcggcgacgc 1372419
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>emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome; segment 3/13
          Length = 349564

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 119    gcgagccggccggcggcgcc 138
              ||||||||||||||||||||
Sbjct: 324917 gcgagccggccggcggcgcc 324936
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>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
             4/14
          Length = 327650

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   gcgagccggccggcggcgcc 138
             ||||||||||||||||||||
Sbjct: 22655 gcgagccggccggcggcgcc 22674
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>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome
          Length = 3544738

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    ggttgaggtcgaagtcacca 178
              ||||||||||||||||||||
Sbjct: 147322 ggttgaggtcgaagtcacca 147303
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>gb|AF078737.1|AF078737 Caldicellulosiruptor sp. Tok7B.1 XynA (xynA) and CelB (celB) genes,
            complete cds; and unknown genes
          Length = 11707

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 246  cagcgaccccgacaccgaca 265
            ||||||||||||||||||||
Sbjct: 8053 cagcgaccccgacaccgaca 8072
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 191     acaggcgcgggtaccgccgcgtgg 214
               |||||||||| |||||||||||||
Sbjct: 6342704 acaggcgcggataccgccgcgtgg 6342681
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>gb|AC120557.12| Mus musculus chromosome 19, clone RP24-493E6, complete sequence
          Length = 169131

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     cttgacctcccccaaccccc 24
             ||||||||||||||||||||
Sbjct: 40492 cttgacctcccccaaccccc 40511
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>emb|BX000508.1|CNS08CDY Oryza sativa chromosome 12, . BAC OJ1575_G05 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 91883

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 50    tcccctagcgacgacgacgactgg 73
             ||||| ||||||||||||||||||
Sbjct: 64868 tccccgagcgacgacgacgactgg 64845
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>emb|AL845479.8| Mouse DNA sequence from clone RP23-232N20 on chromosome 2, complete
             sequence
          Length = 102283

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 11    ctcccccaacccccgtgcgaagcc 34
             ||||||||||||||||| ||||||
Sbjct: 84069 ctcccccaacccccgtgagaagcc 84092


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,750,178
Number of Sequences: 3902068
Number of extensions: 2750178
Number of successful extensions: 65749
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 64160
Number of HSP's gapped (non-prelim): 1593
length of query: 430
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 408
effective length of database: 17,147,199,772
effective search space: 6996057506976
effective search space used: 6996057506976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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