>SFRS1_ARATH (O22315) Pre-mRNA-splicing factor SF2 (SR1 protein)|
          Length = 303

 Score = 29.3 bits (64), Expect = 3.1
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = +2

Query: 35  RNSKTLVSRSP---HRSRCPAPRRPGRRDEEPLPATRR 139
           R+     SRSP    +SR P+PRR   R   PLP+ ++
Sbjct: 243 RSPAKSTSRSPGPRSKSRSPSPRRSRSRSRSPLPSVQK 280

>SSB2_STRCO (Q9X8U3) Single-stranded DNA-binding protein 2 (SSB 2)|
           (Helix-destabilizing protein 2)
          Length = 199

 Score = 29.3 bits (64), Expect = 3.1
 Identities = 16/38 (42%), Positives = 17/38 (44%)
 Frame = -1

Query: 140 GGG*PEGAPHLAGRGAAAPDSGCGGETGRRGFWNSGSG 27
           GGG P   P   G   A    G GG+ G  G W  GSG
Sbjct: 153 GGGAPADDPWATGGAPAGGQQGGGGQGG--GGWGGGSG 188

>E1BL_ADE40 (P10545) E1B protein, large T-antigen (Early E1B 53 kDa protein)|
          Length = 476

 Score = 28.9 bits (63), Expect = 4.1
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = -1

Query: 140 GGG*PEGAPHLAGRGAAAPDSGCGGETGRRGFWNSGSGVRR 18
           GGG PEG P         PD   G  +G+RG  N   G +R
Sbjct: 51  GGGEPEGRPGPFNGIVTEPDPEEGTSSGQRGGINGQRGTKR 91

>MAF_AVIS4 (P23091) Transforming protein Maf|
          Length = 369

 Score = 28.5 bits (62), Expect = 5.4
 Identities = 15/38 (39%), Positives = 16/38 (42%)
 Frame = -1

Query: 140 GGG*PEGAPHLAGRGAAAPDSGCGGETGRRGFWNSGSG 27
           GGG   G PH A  G+A P S      G  G    G G
Sbjct: 185 GGGGGGGHPHGAAPGSAPPSSASSSAAGSGGGGGGGGG 222

>CSKP_MOUSE (O70589) Peripheral plasma membrane protein CASK (EC 2.7.11.1)|
           (Calcium/calmodulin-dependent serine protein kinase)
          Length = 924

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
 Frame = +2

Query: 47  TLVSRSPHRSRCPAPR--RPGRRDEE 118
           TL+++ P R  CP P   RP ++DEE
Sbjct: 757 TLITKHPDRFACPIPHTTRPPKKDEE 782

>GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10|
          Length = 169

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 16/38 (42%), Positives = 16/38 (42%)
 Frame = -1

Query: 140 GGG*PEGAPHLAGRGAAAPDSGCGGETGRRGFWNSGSG 27
           GGG   G     GRG      G GG   RRG    GSG
Sbjct: 88  GGGGGRGGGGYGGRGGGGYGGGGGGYGDRRGGGGYGSG 125

>VASHL_MOUSE (Q8C5G2) Vasohibin-like protein|
          Length = 355

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +2

Query: 56  SRSPHRSRCPAPRRPGRRDEEP 121
           S SP R +   PRR GRRD+ P
Sbjct: 312 SLSPRRRQASPPRRLGRRDKSP 333

>CWC22_USTMA (Q4PCY0) Pre-mRNA-splicing factor CWC22|
          Length = 886

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +2

Query: 38  NSKTLVSRSPHRSRCPAPRRPGRR 109
           +S++  SRSP RSR P PR   RR
Sbjct: 42  SSRSTSSRSPSRSRSPPPRSRRRR 65


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,454,539
Number of Sequences: 219361
Number of extensions: 238465
Number of successful extensions: 2054
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2039
length of database: 80,573,946
effective HSP length: 22
effective length of database: 75,748,004
effective search space used: 1817952096
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)