ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl45c08 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 117 ctcctcctcctcgtcggcgtcgccc 141 ||||||||||||||||||||||||| Sbjct: 30904697 ctcctcctcctcgtcggcgtcgccc 30904673 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 113 ccttctcctcctcctcgtcggcg 135 ||||||||||||||||||||||| Sbjct: 7137011 ccttctcctcctcctcgtcggcg 7137033 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 tcctcctcctcgtcggcgtc 137 |||||||||||||||||||| Sbjct: 28472680 tcctcctcctcgtcggcgtc 28472699
>dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684F11 Length = 147731 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 117 ctcctcctcctcgtcggcgtcgccc 141 ||||||||||||||||||||||||| Sbjct: 88274 ctcctcctcctcgtcggcgtcgccc 88250
>dbj|AK072070.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110I22, full insert sequence Length = 2866 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgtcgccc 141 ||||||||||||||||||||||||| Sbjct: 68 ctcctcctcctcgtcggcgtcgccc 92
>ref|NM_194082.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3510 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgtcgcc 140 |||||||||||||||||||||||| Sbjct: 16 ctcctcctcctcgtcggcgtcgcc 39
>ref|XM_478412.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1747 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgtcgcc 140 |||||||||||||||||||||||| Sbjct: 68 ctcctcctcctcgtcggcgtcgcc 91
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgtcgcc 140 |||||||||||||||||||||||| Sbjct: 31774838 ctcctcctcctcgtcggcgtcgcc 31774861 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgt 136 |||||||||||||||||||| Sbjct: 35215603 ctcctcctcctcgtcggcgt 35215622
>gb|AC092781.6| Oryza sativa chromosome 3 BAC OSJNBb0094O03 genomic sequence, complete sequence Length = 134496 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgtcgcc 140 |||||||||||||||||||||||| Sbjct: 100064 ctcctcctcctcgtcggcgtcgcc 100087
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgtcgcc 140 |||||||||||||||||||||||| Sbjct: 19797472 ctcctcctcctcgtcggcgtcgcc 19797495 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 ctcctcctcctcgtcggcgtcg 138 |||||||||||||||||||||| Sbjct: 3357128 ctcctcctcctcgtcggcgtcg 3357107 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 173 ccggcccccgccgcctccgccgtcg 197 |||||| |||||||||||||||||| Sbjct: 19882412 ccggccaccgccgcctccgccgtcg 19882388 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 tctcctcctcctcgtcggcg 135 |||||||||||||||||||| Sbjct: 7973805 tctcctcctcctcgtcggcg 7973786
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgtcgcc 140 |||||||||||||||||||||||| Sbjct: 31865354 ctcctcctcctcgtcggcgtcgcc 31865377 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgt 136 |||||||||||||||||||| Sbjct: 35305675 ctcctcctcctcgtcggcgt 35305694
>dbj|AP004269.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0048D08 Length = 145772 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgtcgcc 140 |||||||||||||||||||||||| Sbjct: 129478 ctcctcctcctcgtcggcgtcgcc 129501
>dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0650C03 Length = 144337 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgtcgcc 140 |||||||||||||||||||||||| Sbjct: 37631 ctcctcctcctcgtcggcgtcgcc 37654 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 173 ccggcccccgccgcctccgccgtcg 197 |||||| |||||||||||||||||| Sbjct: 122571 ccggccaccgccgcctccgccgtcg 122547
>dbj|AK106685.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-C01, full insert sequence Length = 1747 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgtcgcc 140 |||||||||||||||||||||||| Sbjct: 68 ctcctcctcctcgtcggcgtcgcc 91
>gb|U00089.2| Mycoplasma pneumoniae M129, complete genome Length = 816394 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 356 aattaactgaaggcagtattgcaa 379 |||||||||||||||||||||||| Sbjct: 784034 aattaactgaaggcagtattgcaa 784011
>ref|XM_464756.1| Oryza sativa (japonica cultivar-group), mRNA Length = 633 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 113 ccttctcctcctcctcgtcggcg 135 ||||||||||||||||||||||| Sbjct: 57 ccttctcctcctcctcgtcggcg 35
>ref|XM_506762.1| PREDICTED Oryza sativa (japonica cultivar-group), P0495C02.34 mRNA Length = 639 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 113 ccttctcctcctcctcgtcggcg 135 ||||||||||||||||||||||| Sbjct: 58 ccttctcctcctcctcgtcggcg 36
>gb|AC125780.2| Oryza sativa (japonica culitvar-group) chromosome 11 BAC clone OSJNBa0030I15, complete sequence Length = 148498 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 133 gcgtcgcccgcctcccttcgccg 155 ||||||||||||||||||||||| Sbjct: 36741 gcgtcgcccgcctcccttcgccg 36763
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 133 gcgtcgcccgcctcccttcgccg 155 ||||||||||||||||||||||| Sbjct: 23968874 gcgtcgcccgcctcccttcgccg 23968896 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 ctcctcctcctcgtcggcgtcg 138 |||||||||||||||||||||| Sbjct: 18705138 ctcctcctcctcgtcggcgtcg 18705117
>dbj|AP005003.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0495C02 Length = 151467 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 113 ccttctcctcctcctcgtcggcg 135 ||||||||||||||||||||||| Sbjct: 140430 ccttctcctcctcctcgtcggcg 140452
>dbj|AP005394.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0620H05 Length = 161808 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 113 ccttctcctcctcctcgtcggcg 135 ||||||||||||||||||||||| Sbjct: 36948 ccttctcctcctcctcgtcggcg 36970
>dbj|AK120885.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028P16, full insert sequence Length = 639 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 113 ccttctcctcctcctcgtcggcg 135 ||||||||||||||||||||||| Sbjct: 58 ccttctcctcctcctcgtcggcg 36
>dbj|AK108129.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-D08, full insert sequence Length = 808 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 133 gcgtcgcccgcctcccttcgccg 155 ||||||||||||||||||||||| Sbjct: 335 gcgtcgcccgcctcccttcgccg 357
>dbj|AK072428.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023089C22, full insert sequence Length = 632 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 113 ccttctcctcctcctcgtcggcg 135 ||||||||||||||||||||||| Sbjct: 56 ccttctcctcctcctcgtcggcg 34
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 133 gcgtcgcccgcctcccttcgccg 155 ||||||||||||||||||||||| Sbjct: 24280543 gcgtcgcccgcctcccttcgccg 24280565 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 ctcctcctcctcgtcggcgtcg 138 |||||||||||||||||||||| Sbjct: 18864539 ctcctcctcctcgtcggcgtcg 18864518
>dbj|AB018377.1| Oryza sativa (japonica cultivar-group) OsENOD93b mRNA for early nodulin, complete cds Length = 617 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 113 ccttctcctcctcctcgtcggcg 135 ||||||||||||||||||||||| Sbjct: 35 ccttctcctcctcctcgtcggcg 13
>ref|NM_191108.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1404 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgtcg 138 |||||||||||||||||||||| Sbjct: 942 ctcctcctcctcgtcggcgtcg 963
>ref|XM_476705.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1857 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 ctcctcctcctcgtcggcgtcg 138 |||||||||||||||||||||| Sbjct: 119 ctcctcctcctcgtcggcgtcg 98
>gb|AC079276.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-446B13, complete sequence Length = 205177 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 395 atattgtttattatgagaaaaagaat 420 ||||| |||||||||||||||||||| Sbjct: 168596 atattttttattatgagaaaaagaat 168571
>gb|AC134256.4| Oryza sativa (japonica cultivar-group), complete sequence Length = 178233 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 ctcctcctcctcgtcggcgtcg 138 |||||||||||||||||||||| Sbjct: 119518 ctcctcctcctcgtcggcgtcg 119497
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgtcg 138 |||||||||||||||||||||| Sbjct: 34938782 ctcctcctcctcgtcggcgtcg 34938803 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 105 ccttccgcccttctcctcctcctcgtcg 132 |||||| |||| |||||||||||||||| Sbjct: 32343945 ccttcctccctcctcctcctcctcgtcg 32343918 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ccgcccttctcctcctcctc 128 |||||||||||||||||||| Sbjct: 10468802 ccgcccttctcctcctcctc 10468783
>dbj|AP003446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1529_G03 Length = 100635 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgtcg 138 |||||||||||||||||||||| Sbjct: 68146 ctcctcctcctcgtcggcgtcg 68167
>dbj|AK109356.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-A05, full insert sequence Length = 1703 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgtcg 138 |||||||||||||||||||||| Sbjct: 1326 ctcctcctcctcgtcggcgtcg 1347
>dbj|AK106919.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-B03, full insert sequence Length = 1920 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgtcg 138 |||||||||||||||||||||| Sbjct: 1307 ctcctcctcctcgtcggcgtcg 1328
>dbj|AK066456.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013061L22, full insert sequence Length = 1859 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 ctcctcctcctcgtcggcgtcg 138 |||||||||||||||||||||| Sbjct: 121 ctcctcctcctcgtcggcgtcg 100
>dbj|AK059227.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-D10, full insert sequence Length = 1671 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgtcg 138 |||||||||||||||||||||| Sbjct: 1327 ctcctcctcctcgtcggcgtcg 1348
>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1714_H10 Length = 191580 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 ctcctcctcctcgtcggcgtcg 138 |||||||||||||||||||||| Sbjct: 166821 ctcctcctcctcgtcggcgtcg 166800
>gb|AC005515.1|AC005515 Homo sapiens chromosome 19, cosmid F19346, complete sequence Length = 39132 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 256 tggctgaccagttaatttattt 277 |||||||||||||||||||||| Sbjct: 20455 tggctgaccagttaatttattt 20434
>emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete genome; segment 27/29 Length = 303450 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 109 ccgcccttctcctcctcctcgtcggcgtcg 138 |||||| ||||||||||||||||| ||||| Sbjct: 250562 ccgcccgtctcctcctcctcgtcgtcgtcg 250591
>emb|AL772187.6| Mouse DNA sequence from clone RP23-38K18 on chromosome 4, complete sequence Length = 230409 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 172 cccggcccccgccgcctccgcc 193 |||||||||||||||||||||| Sbjct: 131566 cccggcccccgccgcctccgcc 131545
>gb|AC134662.11| Mus musculus chromosome 15, clone RP24-445D14, complete sequence Length = 177038 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 402 ttattatgagaaaaagaatggagagaaag 430 ||||| ||||| ||||||||||||||||| Sbjct: 63115 ttattttgagagaaagaatggagagaaag 63087
>ref|XM_478422.1| Oryza sativa (japonica cultivar-group), mRNA Length = 872 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 173 ccggcccccgccgcctccgccgtcg 197 |||||| |||||||||||||||||| Sbjct: 440 ccggccaccgccgcctccgccgtcg 416
>ref|XM_478421.1| Oryza sativa (japonica cultivar-group), mRNA Length = 787 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 173 ccggcccccgccgcctccgccgtcg 197 |||||| |||||||||||||||||| Sbjct: 358 ccggccaccgccgcctccgccgtcg 334
>ref|XM_506371.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0036M16.111-2 mRNA Length = 801 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 173 ccggcccccgccgcctccgccgtcg 197 |||||| |||||||||||||||||| Sbjct: 405 ccggccaccgccgcctccgccgtcg 381
>gb|BT018218.1| Zea mays clone EL01N0561B10.c mRNA sequence Length = 670 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 ccttctcctcctcctcgtcgg 133 ||||||||||||||||||||| Sbjct: 357 ccttctcctcctcctcgtcgg 377
>gb|AC091724.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0004E08, complete sequence Length = 158294 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 gcccttctcctcctcctcgtc 131 ||||||||||||||||||||| Sbjct: 49727 gcccttctcctcctcctcgtc 49747
>gb|DQ145243.1| Drosophila miranda neo-Y Hr46 gene, partial sequence Length = 1257 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 ttctcctcctcctcgtcggcg 135 ||||||||||||||||||||| Sbjct: 986 ttctcctcctcctcgtcggcg 1006
>gb|DQ145242.1| Drosophila miranda neo-X Hr46 gene, partial sequence Length = 1247 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 ttctcctcctcctcgtcggcg 135 ||||||||||||||||||||| Sbjct: 263 ttctcctcctcctcgtcggcg 243
>gb|AC099029.2| Drosophila melanogaster clone BACR09J12, complete sequence Length = 189618 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 ttctcctcctcctcgtcggcg 135 ||||||||||||||||||||| Sbjct: 15111 ttctcctcctcctcgtcggcg 15091
>gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_B11, complete sequence Length = 162772 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 109 ccgcccttctcctcctcctcgtcggcgtc 137 ||||||| |||||||||||||||| |||| Sbjct: 16798 ccgccctcctcctcctcctcgtcgccgtc 16826
>gb|AC002076.2| Homo sapiens BAC clone GS1-345D13 from 7, complete sequence Length = 149764 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 409 gagaaaaagaatggagagaaaggaa 433 ||||||||||| ||||||||||||| Sbjct: 105072 gagaaaaagaaaggagagaaaggaa 105096
>ref|XM_532099.2| PREDICTED: Canis familiaris similar to transporter 2, ATP-binding cassette, sub-family B isoform 1 (LOC474864), mRNA Length = 2906 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 151 cgccggaggctcgcgtccaggcccggccc 179 ||||||||||||||| || |||||||||| Sbjct: 54 cgccggaggctcgcggcccggcccggccc 82
>emb|AJ575805.1|TNI575805 Tetraodon nigroviridis mRNA for immunoglobulin lambda-1 (gene IGL1), clone COAD72F1 Length = 944 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 cttccgcccttctcctcctcc 126 ||||||||||||||||||||| Sbjct: 566 cttccgcccttctcctcctcc 546
>emb|AJ575608.1|TNI575608 Tetraodon nigroviridis mRNA for immunoglobulin light chain (gene IgL1), clone IgLA16 Length = 580 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 cttccgcccttctcctcctcc 126 ||||||||||||||||||||| Sbjct: 520 cttccgcccttctcctcctcc 500
>emb|AJ575606.1|TNI575606 Tetraodon nigroviridis mRNA for immunoglobulin light chain (gene IgL1), clone IgLA14 Length = 580 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 cttccgcccttctcctcctcc 126 ||||||||||||||||||||| Sbjct: 520 cttccgcccttctcctcctcc 500
>emb|AJ575598.1|TNI575598 Tetraodon nigroviridis mRNA for immunoglobulin light chain (gene IgL1), clone IgLA06 Length = 580 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 cttccgcccttctcctcctcc 126 ||||||||||||||||||||| Sbjct: 520 cttccgcccttctcctcctcc 500
>emb|AJ575596.1|TNI575596 Tetraodon nigroviridis mRNA for immunoglobulin light chain (gene IgL1), clone IgLA04 Length = 580 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 cttccgcccttctcctcctcc 126 ||||||||||||||||||||| Sbjct: 520 cttccgcccttctcctcctcc 500
>emb|CR731139.2|CNS0GR3C Tetraodon nigroviridis full-length cDNA Length = 611 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 cttccgcccttctcctcctcc 126 ||||||||||||||||||||| Sbjct: 229 cttccgcccttctcctcctcc 209
>emb|CR721927.2|CNS0GJZH Tetraodon nigroviridis full-length cDNA Length = 604 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 cttccgcccttctcctcctcc 126 ||||||||||||||||||||| Sbjct: 228 cttccgcccttctcctcctcc 208
>emb|CR721042.2|CNS0GJAW Tetraodon nigroviridis full-length cDNA Length = 574 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 cttccgcccttctcctcctcc 126 ||||||||||||||||||||| Sbjct: 228 cttccgcccttctcctcctcc 208
>emb|CR713928.2|CNS0GDTG Tetraodon nigroviridis full-length cDNA Length = 604 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 cttccgcccttctcctcctcc 126 ||||||||||||||||||||| Sbjct: 221 cttccgcccttctcctcctcc 201
>emb|CR707998.2|CNS0G98Q Tetraodon nigroviridis full-length cDNA Length = 605 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 cttccgcccttctcctcctcc 126 ||||||||||||||||||||| Sbjct: 221 cttccgcccttctcctcctcc 201
>emb|CR702363.2|CNS0G4W7 Tetraodon nigroviridis full-length cDNA Length = 606 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 cttccgcccttctcctcctcc 126 ||||||||||||||||||||| Sbjct: 224 cttccgcccttctcctcctcc 204
>emb|CR698855.2|CNS0G26R Tetraodon nigroviridis full-length cDNA Length = 610 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 cttccgcccttctcctcctcc 126 ||||||||||||||||||||| Sbjct: 228 cttccgcccttctcctcctcc 208
>emb|CR693679.2|CNS0FY6Z Tetraodon nigroviridis full-length cDNA Length = 602 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 cttccgcccttctcctcctcc 126 ||||||||||||||||||||| Sbjct: 225 cttccgcccttctcctcctcc 205
>emb|CR689490.2|CNS0FUYM Tetraodon nigroviridis full-length cDNA Length = 614 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 cttccgcccttctcctcctcc 126 ||||||||||||||||||||| Sbjct: 229 cttccgcccttctcctcctcc 209
>emb|CR685722.2|CNS0FS1Y Tetraodon nigroviridis full-length cDNA Length = 603 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 cttccgcccttctcctcctcc 126 ||||||||||||||||||||| Sbjct: 224 cttccgcccttctcctcctcc 204
>emb|CR685597.2|CNS0FRYH Tetraodon nigroviridis full-length cDNA Length = 610 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 cttccgcccttctcctcctcc 126 ||||||||||||||||||||| Sbjct: 228 cttccgcccttctcctcctcc 208
>emb|CR684854.2|CNS0FRDU Tetraodon nigroviridis full-length cDNA Length = 606 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 cttccgcccttctcctcctcc 126 ||||||||||||||||||||| Sbjct: 228 cttccgcccttctcctcctcc 208
>gb|AC096792.12| Rattus norvegicus 7 BAC CH230-8O15 (Children's Hospital Oakland Research Institute) complete sequence Length = 205454 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 408 tgagaaaaagaatggagagaa 428 ||||||||||||||||||||| Sbjct: 168351 tgagaaaaagaatggagagaa 168331
>emb|AL592446.4| Human DNA sequence from clone RP11-291B6 on chromosome 1, complete sequence Length = 29787 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 gcaccatccatattgtttatt 406 ||||||||||||||||||||| Sbjct: 21701 gcaccatccatattgtttatt 21721
>emb|AL512635.8| Human DNA sequence from clone RP11-15P13 on chromosome 9 Contains a survival of motor neuron 1, telomeric (SMN1) pseudogene and the 3' end of the MLLT3 gene for myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 (AF9), complete sequence Length = 178631 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 402 ttattatgagaaaaagaatgg 422 ||||||||||||||||||||| Sbjct: 129760 ttattatgagaaaaagaatgg 129780
>ref|XM_794784.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC576111 (LOC576111), partial mRNA Length = 1026 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 tccgcccttctcctcctcctc 128 ||||||||||||||||||||| Sbjct: 580 tccgcccttctcctcctcctc 560
>emb|AJ630364.1| Canis familiaris major histocompatibility complex class II region on chromosome CFA12, partial sequence, BAC clone 58o15, containing DLA-DRB1 and RPS27 pseudogenes, DLA-DOB, TAP2, PSMB8, TAP1 and PSMB9 genes, and RPS15A and ATP6V0D2 pseudogenes Length = 139950 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 151 cgccggaggctcgcgtccaggcccggccc 179 ||||||||||||||| || |||||||||| Sbjct: 70475 cgccggaggctcgcggcccggcccggccc 70447
>gb|AC182472.3| Pan troglodytes BAC clone CH251-394C9 from chromosome 19, complete sequence Length = 165954 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 tggctgaccagttaatttatt 276 ||||||||||||||||||||| Sbjct: 129071 tggctgaccagttaatttatt 129091
>gb|AC122145.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0034B05, complete sequence Length = 125655 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 gcccttctcctcctcctcgtc 131 ||||||||||||||||||||| Sbjct: 115382 gcccttctcctcctcctcgtc 115402
>ref|NM_176121.1| Drosophila melanogaster Hormone receptor-like in 46 CG33183-RC, transcript variant C (Hr46), mRNA Length = 5268 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 ttctcctcctcctcgtcggcg 135 ||||||||||||||||||||| Sbjct: 610 ttctcctcctcctcgtcggcg 590
>gb|AC021892.16| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0053D03, from chromosome 10, complete sequence Length = 199113 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 tcctcctcctcgtcggcgtcg 138 ||||||||||||||||||||| Sbjct: 142128 tcctcctcctcgtcggcgtcg 142108
>gb|AC007417.5| Drosophila melanogaster, chromosome 2R, region 47A-47B, BAC clone BACR48F07, complete sequence Length = 175681 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 ttctcctcctcctcgtcggcg 135 ||||||||||||||||||||| Sbjct: 33432 ttctcctcctcctcgtcggcg 33452
>gb|AC002050.8| Homo sapiens Chromosome 9p22 Cosmid Clone 213a7, complete sequence Length = 42210 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 402 ttattatgagaaaaagaatgg 422 ||||||||||||||||||||| Sbjct: 5324 ttattatgagaaaaagaatgg 5344
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 427 aaaggaactgtctttcttgtt 447 ||||||||||||||||||||| Sbjct: 21741551 aaaggaactgtctttcttgtt 21741571 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgtcgcccgcc 144 |||||||||||||||| |||||| |||| Sbjct: 24456100 ctcctcctcctcgtcgccgtcgcgcgcc 24456127
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 tcctcctcctcgtcggcgtcg 138 ||||||||||||||||||||| Sbjct: 8114351 tcctcctcctcgtcggcgtcg 8114371 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 gcccttctcctcctcctcgtc 131 ||||||||||||||||||||| Sbjct: 3458598 gcccttctcctcctcctcgtc 3458618
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 112 cccttctcctcctcctcgtcggcgtcgcc 140 |||| |||||||||||||||| ||||||| Sbjct: 27029502 ccctcctcctcctcctcgtcgccgtcgcc 27029474 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 gcccttctcctcctcctcgt 130 |||||||||||||||||||| Sbjct: 23910107 gcccttctcctcctcctcgt 23910126
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 109 ccgcccttctcctcctcctcgtcggcgtc 137 ||||||| |||||||||||||||| |||| Sbjct: 25074143 ccgccctcctcctcctcctcgtcgccgtc 25074171 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 114 cttctcctcctcctcgtcggcgtc 137 |||||| ||||||||||||||||| Sbjct: 29005177 cttctcgtcctcctcgtcggcgtc 29005154 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ccgcccttctcctcctcctc 128 |||||||||||||||||||| Sbjct: 18450876 ccgcccttctcctcctcctc 18450895 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 ccgcccttctcctcctcctcgtcg 132 ||||||| |||||||||||||||| Sbjct: 13396189 ccgccctcctcctcctcctcgtcg 13396212
>gb|AF217542.1|AF217542 Homo sapiens tissue factor pathway inhibitor 2 gene, complete cds Length = 8173 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 409 gagaaaaagaatggagagaaaggaa 433 ||||||||||| ||||||||||||| Sbjct: 5711 gagaaaaagaaaggagagaaaggaa 5687
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 gcccttctcctcctcctcgtc 131 ||||||||||||||||||||| Sbjct: 819856 gcccttctcctcctcctcgtc 819836 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 cccttctcctcctcctcgtc 131 |||||||||||||||||||| Sbjct: 1684403 cccttctcctcctcctcgtc 1684422 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 cgcccttctcctcctcctcg 129 |||||||||||||||||||| Sbjct: 1515273 cgcccttctcctcctcctcg 1515254
>dbj|AP004744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0065C04 Length = 165270 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 112 cccttctcctcctcctcgtcggcgtcgcc 140 |||| |||||||||||||||| ||||||| Sbjct: 153263 ccctcctcctcctcctcgtcgccgtcgcc 153235
>dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0036M16 Length = 158880 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 173 ccggcccccgccgcctccgccgtcg 197 |||||| |||||||||||||||||| Sbjct: 47062 ccggccaccgccgcctccgccgtcg 47038
>dbj|AK120186.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034M15, full insert sequence Length = 2673 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 109 ccgcccttctcctcctcctcgtcggcgtc 137 ||||||| |||||||||||||||| |||| Sbjct: 39 ccgccctcctcctcctcctcgtcgccgtc 67
>dbj|AK111631.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119L23, full insert sequence Length = 2439 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 112 cccttctcctcctcctcgtcggcgtcgcc 140 |||| |||||||||||||||| ||||||| Sbjct: 475 ccctcctcctcctcctcgtcgccgtcgcc 447
>dbj|AK099296.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138P10, full insert sequence Length = 787 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 173 ccggcccccgccgcctccgccgtcg 197 |||||| |||||||||||||||||| Sbjct: 358 ccggccaccgccgcctccgccgtcg 334
>dbj|AK071785.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111J08, full insert sequence Length = 1681 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 112 cccttctcctcctcctcgtcggcgtcgcc 140 |||| |||||||||||||||| ||||||| Sbjct: 478 ccctcctcctcctcctcgtcgccgtcgcc 450
>dbj|AK071773.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111H14, full insert sequence Length = 800 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 173 ccggcccccgccgcctccgccgtcg 197 |||||| |||||||||||||||||| Sbjct: 405 ccggccaccgccgcctccgccgtcg 381
>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib Length = 2013089 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 ccttctcctcctcctcgtcgg 133 ||||||||||||||||||||| Sbjct: 563223 ccttctcctcctcctcgtcgg 563243
>dbj|AK063798.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-F05, full insert sequence Length = 872 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 173 ccggcccccgccgcctccgccgtcg 197 |||||| |||||||||||||||||| Sbjct: 440 ccggccaccgccgcctccgccgtcg 416
>emb|BX569795.5| Zebrafish DNA sequence from clone CH211-206A19 in linkage group 22, complete sequence Length = 162622 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 104 cccttccgcccttctcctcctcctc 128 ||||||| ||||||||||||||||| Sbjct: 13355 cccttccccccttctcctcctcctc 13331
>gb|AE003830.3| Drosophila melanogaster chromosome 2R, section 20 of 73 of the complete sequence Length = 240481 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 ttctcctcctcctcgtcggcg 135 ||||||||||||||||||||| Sbjct: 109588 ttctcctcctcctcgtcggcg 109608
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 tcctcctcctcgtcggcgtcg 138 ||||||||||||||||||||| Sbjct: 8119450 tcctcctcctcgtcggcgtcg 8119470 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 gcccttctcctcctcctcgtc 131 ||||||||||||||||||||| Sbjct: 3458519 gcccttctcctcctcctcgtc 3458539
>gb|AC005439.1|AC005439 Drosophila melanogaster DNA sequence (P1 DS01989 (D353)), complete sequence Length = 29485 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 ttctcctcctcctcgtcggcg 135 ||||||||||||||||||||| Sbjct: 19904 ttctcctcctcctcgtcggcg 19924
>emb|AL606592.2|OSJN00024 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006B20, complete sequence Length = 141915 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 427 aaaggaactgtctttcttgtt 447 ||||||||||||||||||||| Sbjct: 53168 aaaggaactgtctttcttgtt 53188
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 gcccttctcctcctcctcgtc 131 ||||||||||||||||||||| Sbjct: 490936 gcccttctcctcctcctcgtc 490916 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 cccttctcctcctcctcgtc 131 |||||||||||||||||||| Sbjct: 1372636 cccttctcctcctcctcgtc 1372655 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 cgcccttctcctcctcctcg 129 |||||||||||||||||||| Sbjct: 1191274 cgcccttctcctcctcctcg 1191255
>emb|AL845272.2| Mouse DNA sequence from clone RP23-169D18 on chromosome X, complete sequence Length = 117773 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 tccgcccttctcctcctcctc 128 ||||||||||||||||||||| Sbjct: 28221 tccgcccttctcctcctcctc 28201
>ref|NM_183590.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1785 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ccgcccttctcctcctcctc 128 |||||||||||||||||||| Sbjct: 167 ccgcccttctcctcctcctc 148
>ref|XM_483156.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1451 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgtcgcc 140 |||||||||||||||| ||||||| Sbjct: 88 ctcctcctcctcgtcgccgtcgcc 111
>ref|XM_482820.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1236 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgtcgcc 140 ||||||||| |||||||||||||| Sbjct: 999 ctcctcctcgtcgtcggcgtcgcc 1022
>ref|XM_475980.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 669 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 114 cttctcctcctcctcgtcggcgtc 137 |||||| ||||||||||||||||| Sbjct: 336 cttctcgtcctcctcgtcggcgtc 313
>ref|XM_467251.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1024 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 tcctcctcctcgtcggcgtc 137 |||||||||||||||||||| Sbjct: 303 tcctcctcctcgtcggcgtc 322
>ref|XM_450702.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1563 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ccgcccttctcctcctcctc 128 |||||||||||||||||||| Sbjct: 1457 ccgcccttctcctcctcctc 1438
>ref|NM_191392.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3636 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 105 ccttccgcccttctcctcctcctcgtcg 132 |||||| |||| |||||||||||||||| Sbjct: 246 ccttcctccctcctcctcctcctcgtcg 219
>ref|XM_470393.1| Oryza sativa (japonica cultivar-group), mRNA Length = 885 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 ctcctcctcctcgtcggcgt 136 |||||||||||||||||||| Sbjct: 489 ctcctcctcctcgtcggcgt 470
>ref|NM_186806.1| Oryza sativa (japonica cultivar-group), mRNA Length = 675 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 tctcctcctcctcgtcggcg 135 |||||||||||||||||||| Sbjct: 606 tctcctcctcctcgtcggcg 625
>gb|AY023075.1| Oryza sativa microsatellite MRG5400 containing (GAG)X8, closest to marker S2581, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 117 ctcctcctcctcgtcggcgtcgcccgcc 144 |||||||||||||||| |||||| |||| Sbjct: 112 ctcctcctcctcgtcgtcgtcgctcgcc 85
>gb|CP000061.1| Aster yellows witches'-broom phytoplasma AYWB, complete genome Length = 706569 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 ttattatgagaaaaagaatg 421 |||||||||||||||||||| Sbjct: 670601 ttattatgagaaaaagaatg 670582 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 ttattatgagaaaaagaatg 421 |||||||||||||||||||| Sbjct: 667092 ttattatgagaaaaagaatg 667073 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 ttattatgagaaaaagaatg 421 |||||||||||||||||||| Sbjct: 282688 ttattatgagaaaaagaatg 282707 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 ttattatgagaaaaagaatg 421 |||||||||||||||||||| Sbjct: 96161 ttattatgagaaaaagaatg 96180 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 ttattatgagaaaaagaatg 421 |||||||||||||||||||| Sbjct: 50233 ttattatgagaaaaagaatg 50252
>ref|XM_587712.2| PREDICTED: Bos taurus similar to coiled-coil domain containing 16 (LOC539497), mRNA Length = 1403 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 cccttctcctcctcctcgtc 131 |||||||||||||||||||| Sbjct: 514 cccttctcctcctcctcgtc 495
>gb|AC108501.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1354_D07, complete sequence Length = 156163 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ccgcccttctcctcctcctc 128 |||||||||||||||||||| Sbjct: 90713 ccgcccttctcctcctcctc 90732
>gb|AC104710.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1286_E05, complete sequence Length = 106212 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ccgcccttctcctcctcctc 128 |||||||||||||||||||| Sbjct: 3462 ccgcccttctcctcctcctc 3481
>gb|AC098598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1007_H05, complete sequence Length = 108479 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 114 cttctcctcctcctcgtcggcgtc 137 |||||| ||||||||||||||||| Sbjct: 15232 cttctcgtcctcctcgtcggcgtc 15209
>gb|AC093953.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1057_C01, complete sequence Length = 142752 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 ccgcccttctcctcctcctcgtcg 132 ||||||| |||||||||||||||| Sbjct: 79652 ccgccctcctcctcctcctcgtcg 79675
>gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence, complete sequence Length = 156606 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgt 136 |||||||||||||||||||| Sbjct: 94364 ctcctcctcctcgtcggcgt 94383
>gb|AC141628.2| Mus musculus BAC clone RP24-358E15 from chromosome 18, complete sequence Length = 170129 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 agaaaaagaatggagagaaa 429 |||||||||||||||||||| Sbjct: 79464 agaaaaagaatggagagaaa 79445
>ref|XM_751286.1| Ustilago maydis 521 hypothetical protein (UM00232.1) partial mRNA Length = 1134 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 ccttctcctcctcctcgtcg 132 |||||||||||||||||||| Sbjct: 872 ccttctcctcctcctcgtcg 891
>ref|XM_380823.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00647.1) partial mRNA Length = 7209 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 tctcctcctcctcgtcggcg 135 |||||||||||||||||||| Sbjct: 5439 tctcctcctcctcgtcggcg 5458
>gb|AC146007.2| Pan troglodytes BAC clone RP43-165B16 from 7, complete sequence Length = 173047 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 410 agaaaaagaatggagagaaaggaa 433 |||||||||| ||||||||||||| Sbjct: 42833 agaaaaagaaaggagagaaaggaa 42856
>emb|CR956427.7| Pig DNA sequence from clone CH242-51O7 on chromosome 6, complete sequence Length = 187800 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 170 ggcccggcccccgccgcctccgcc 193 |||||||||||||||||| ||||| Sbjct: 65382 ggcccggcccccgccgccgccgcc 65359
>gb|AC126807.4| Mus musculus BAC clone RP23-306D4 from chromosome 18, complete sequence Length = 244566 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 410 agaaaaagaatggagagaaaggaa 433 |||||||||| ||||||||||||| Sbjct: 43029 agaaaaagaaaggagagaaaggaa 43052
>gb|AC127293.3| Mus musculus BAC clone RP23-385B3 from chromosome 18, complete sequence Length = 209455 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 agaaaaagaatggagagaaa 429 |||||||||||||||||||| Sbjct: 88846 agaaaaagaatggagagaaa 88827
>gb|AY165002.1| Pigmentiphaga kullae aerobic azoreductase (azoA) gene, complete cds Length = 11821 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 ggcccggcccccgccgcctc 189 |||||||||||||||||||| Sbjct: 4909 ggcccggcccccgccgcctc 4928
>emb|CR681887.2|CNS0FP3F Tetraodon nigroviridis full-length cDNA Length = 1637 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 tcctcctcgtcggcgtcgcccgcc 144 |||||||||||| ||||||||||| Sbjct: 291 tcctcctcgtcgtcgtcgcccgcc 268
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 407 atgagaaaaagaatggagagaaag 430 ||||||||||||||||||| |||| Sbjct: 298692 atgagaaaaagaatggagaaaaag 298715
>gb|AC142321.1| Pan troglodytes BAC clone RP43-63G10 from 7, complete sequence Length = 157283 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 409 gagaaaaagaatggagagaaagga 432 ||||||||||||| |||||||||| Sbjct: 110497 gagaaaaagaatgcagagaaagga 110520
>emb|AL353092.6| Human DNA sequence from clone RP1-180I13 on chromosome 20 Contains 5' end of the HCK gene for hemopoietic cell kinase (protein tyrosine kinase), contains ESTs, STSs, GSSs and a CpG island, complete sequence Length = 25010 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 ccttccgcccttctcctcctcctc 128 |||||| ||||||||||||||||| Sbjct: 8812 ccttccccccttctcctcctcctc 8835
>emb|AL161652.25| Human DNA sequence from clone RP11-543N17 on chromosome 10 Contains the 3' end of a novel gene (FLJ20445) and a MAP/microtubule affinity-regulating kinase 2 (MARK2) pseudogene, complete sequence Length = 156949 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 ccatccatattgtttattat 408 |||||||||||||||||||| Sbjct: 122437 ccatccatattgtttattat 122418
>emb|AL160260.22| Human DNA sequence from clone RP11-519H8 on chromosome 6 Contains a CpG island, complete sequence Length = 75778 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 gaaaaagaatggagagaaag 430 |||||||||||||||||||| Sbjct: 14515 gaaaaagaatggagagaaag 14496
>emb|AL161627.13| Human DNA sequence from clone RP11-287A8 on chromosome 9 Contains the 3' end of the gene for CDw92 antigen (CDW92) (CTL1), a novel gene, the CSDUFD1 gene for cystatin and DUF19 domain containing 1, the 5' end of a novel gene, part of a pseudogene similar to KIAA1272, KIAA0884, Drosophila CG5521 and rat Tulip 1 and 2 proteins and a CpG island, complete sequence Length = 138752 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 aaaaagaatggagagaaagg 431 |||||||||||||||||||| Sbjct: 22357 aaaaagaatggagagaaagg 22376
>emb|AL138895.16| Human DNA sequence from clone RP11-9M16 on chromosome 9 Contains a novel gene (DKFZP434N014), a novel gene and two CpG islands, complete sequence Length = 132292 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 gaaaaagaatggagagaaag 430 |||||||||||||||||||| Sbjct: 105713 gaaaaagaatggagagaaag 105732
>emb|AL121902.13|HSBA80K6 Human DNA sequence from clone RP11-80K6 on chromosome 20 Contains a novel gene, the RPL36P1 gene for ribosomal protein L36 pseudogene 1, the 5' end of the gene for a novel protein (FLJ33887) and a CpG island, complete sequence Length = 170740 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 ttatgatgatcatctgtatt 252 |||||||||||||||||||| Sbjct: 84064 ttatgatgatcatctgtatt 84083
>ref|XM_964677.1| PREDICTED: Tribolium castaneum similar to CG9403-PA, isoform A (LOC658276), mRNA Length = 2542 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 cttctcctcctcctcgtcgg 133 |||||||||||||||||||| Sbjct: 1573 cttctcctcctcctcgtcgg 1554
>gb|DQ442403.1| Striga asiatica clone StIAA-1 auxin-regulated protein mRNA, complete cds Length = 1228 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 aataaggtgcaccatccata 397 |||||||||||||||||||| Sbjct: 646 aataaggtgcaccatccata 627
>emb|AL731617.3|OSJN00261 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0076N16, complete sequence Length = 146313 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgtcgcccgcc 144 |||||||||||||||| |||||| |||| Sbjct: 15731 ctcctcctcctcgtcgccgtcgcgcgcc 15758
>emb|BX927069.11| Zebrafish DNA sequence from clone DKEY-24C22 in linkage group 23, complete sequence Length = 162588 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 accttgaagttggttattct 346 |||||||||||||||||||| Sbjct: 3067 accttgaagttggttattct 3048
>gb|AC011911.4| Drosophila melanogaster 3L BAC RP98-48J5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 178394 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 catccatattgtttattatg 409 |||||||||||||||||||| Sbjct: 101587 catccatattgtttattatg 101606
>gb|AC016017.14| Mus Musculus Strain C57BL6/J Chromosome 6 BAC Clone RP23-274F23, complete sequence Length = 184892 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 ccttccgcccttctcctcctcctc 128 |||||| ||||||||||||||||| Sbjct: 181867 ccttcctcccttctcctcctcctc 181890
>tpg|BK005012.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY transcription factor 9 (WRKY9) gene, complete cds Length = 8241 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ccgcccttctcctcctcctc 128 |||||||||||||||||||| Sbjct: 167 ccgcccttctcctcctcctc 148
>dbj|AK024134.1| Homo sapiens cDNA FLJ14072 fis, clone HEMBB1001665 Length = 2483 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 gcccggcccccgccgcctcc 190 |||||||||||||||||||| Sbjct: 346 gcccggcccccgccgcctcc 365
>dbj|AK023315.1| Homo sapiens cDNA FLJ13253 fis, clone OVARC1000751 Length = 1903 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 gcccggcccccgccgcctcc 190 |||||||||||||||||||| Sbjct: 361 gcccggcccccgccgcctcc 380
>gb|AC018697.4| Homo sapiens BAC clone RP11-577J12 from 18, complete sequence Length = 180562 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 105 ccttccgcccttctcctcctcctc 128 |||||| ||||||||||||||||| Sbjct: 56756 ccttccccccttctcctcctcctc 56733
>gb|AC008677.5| Homo sapiens chromosome 5 clone CTB-47B8, complete sequence Length = 160929 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 cccttctcctcctcctcgtc 131 |||||||||||||||||||| Sbjct: 108365 cccttctcctcctcctcgtc 108384
>ref|XM_939306.1| PREDICTED: Homo sapiens similar to protein phosphatase 1H (PP2C domain containing) (LOC650214), mRNA Length = 2492 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 gcccggcccccgccgcctcc 190 |||||||||||||||||||| Sbjct: 360 gcccggcccccgccgcctcc 379
>ref|XM_928124.1| PREDICTED: Homo sapiens similar to protein phosphatase 1H (PP2C domain containing) (LOC645085), mRNA Length = 2492 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 gcccggcccccgccgcctcc 190 |||||||||||||||||||| Sbjct: 360 gcccggcccccgccgcctcc 379
>gb|AC151521.2| Medicago truncatula chromosome 7 BAC clone mte1-49d11, complete sequence Length = 111733 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 cccttctcctcctcctcgtc 131 |||||||||||||||||||| Sbjct: 42995 cccttctcctcctcctcgtc 42976
>gb|BC104536.1| Bos taurus secreted frizzled-related protein 2, mRNA (cDNA clone MGC:128911 IMAGE:8120240), complete cds Length = 2024 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ccggcccccgccgcctccgc 192 |||||||||||||||||||| Sbjct: 174 ccggcccccgccgcctccgc 193
>dbj|AK030416.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330409N07 product:unclassifiable, full insert sequence Length = 2806 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 ccttccgcccttctcctcctcctc 128 |||||| ||||||||||||||||| Sbjct: 145 ccttcctcccttctcctcctcctc 168
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 117 ctcctcctcctcgtcggcgtcgcc 140 |||||||||||||||| ||||||| Sbjct: 23473442 ctcctcctcctcgtcgccgtcgcc 23473419
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 gcccggcccccgccgcctccgccg 194 |||| ||||||||||||||||||| Sbjct: 20390309 gccccgcccccgccgcctccgccg 20390286 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ccgcccttctcctcctcctc 128 |||||||||||||||||||| Sbjct: 12313558 ccgcccttctcctcctcctc 12313539
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgtcgcc 140 |||||||||||||||| ||||||| Sbjct: 24526105 ctcctcctcctcgtcgccgtcgcc 24526128 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgtcgcc 140 ||||||||| |||||||||||||| Sbjct: 22748560 ctcctcctcgtcgtcggcgtcgcc 22748583
>gb|AC096731.3| Homo sapiens BAC clone RP11-72C15 from 4, complete sequence Length = 91203 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 tttattatgagaaaaagaat 420 |||||||||||||||||||| Sbjct: 67901 tttattatgagaaaaagaat 67882
>dbj|AP002480.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0469E05 Length = 160769 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ccgcccttctcctcctcctc 128 |||||||||||||||||||| Sbjct: 113762 ccgcccttctcctcctcctc 113743
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 172 cccggcccccgccgcctccgccgt 195 ||||||| |||||||||||||||| Sbjct: 8905131 cccggccaccgccgcctccgccgt 8905108
>gb|AC078814.23| Homo sapiens 12 BAC RP11-848D3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 191463 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 gcccggcccccgccgcctcc 190 |||||||||||||||||||| Sbjct: 154493 gcccggcccccgccgcctcc 154512
>dbj|AP004118.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1148_D05 Length = 155146 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 tcctcctcctcgtcggcgtc 137 |||||||||||||||||||| Sbjct: 96801 tcctcctcctcgtcggcgtc 96820
>dbj|AP004786.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0017H11 Length = 158374 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 tcctcctcctcgtcggcgtc 137 |||||||||||||||||||| Sbjct: 41521 tcctcctcctcgtcggcgtc 41540
>dbj|AP003371.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1143G03 Length = 137770 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 105 ccttccgcccttctcctcctcctcgtcg 132 |||||| |||| |||||||||||||||| Sbjct: 23442 ccttcctccctcctcctcctcctcgtcg 23415
>dbj|AP003377.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0053G03 Length = 101901 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 105 ccttccgcccttctcctcctcctcgtcg 132 |||||| |||| |||||||||||||||| Sbjct: 76230 ccttcctccctcctcctcctcctcgtcg 76203
>dbj|AP003616.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0490F09 Length = 149542 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 gcccttctcctcctcctcgt 130 |||||||||||||||||||| Sbjct: 39718 gcccttctcctcctcctcgt 39737
>dbj|AP000364.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0026F07 Length = 137354 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgtcgcc 140 |||||||||||||||| ||||||| Sbjct: 34365 ctcctcctcctcgtcgccgtcgcc 34388
>emb|AJ575668.1|OSA575668 Oryza sativa (japonica cultivar-group) raftin1 gene, exons 1-3 Length = 1479 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgtcgcc 140 |||||||||||||||| ||||||| Sbjct: 75 ctcctcctcctcgtcgccgtcgcc 98
>emb|AJ575667.1|OSA575667 Oryza sativa (japonica cultivar-group) mRNA for RAFTIN1 protein Length = 1301 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgtcgcc 140 |||||||||||||||| ||||||| Sbjct: 75 ctcctcctcctcgtcgccgtcgcc 98
>dbj|AP005682.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1531_B07 Length = 115245 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 gcccggcccccgccgcctccgccg 194 |||| ||||||||||||||||||| Sbjct: 18448 gccccgcccccgccgcctccgccg 18425
>dbj|AP003754.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1341_A08 Length = 128955 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 tctcctcctcctcgtcggcg 135 |||||||||||||||||||| Sbjct: 12002 tctcctcctcctcgtcggcg 11983
>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1168F12 Length = 141524 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ccgcccttctcctcctcctc 128 |||||||||||||||||||| Sbjct: 97112 ccgcccttctcctcctcctc 97093
>dbj|AP006628.1| Onion yellows phytoplasma OY-M DNA, complete genome Length = 860631 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 ttattatgagaaaaagaatg 421 |||||||||||||||||||| Sbjct: 828934 ttattatgagaaaaagaatg 828915 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 ttattatgagaaaaagaatg 421 |||||||||||||||||||| Sbjct: 634852 ttattatgagaaaaagaatg 634871 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 ttattatgagaaaaagaatg 421 |||||||||||||||||||| Sbjct: 601326 ttattatgagaaaaagaatg 601307 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 ttattatgagaaaaagaatg 421 |||||||||||||||||||| Sbjct: 459624 ttattatgagaaaaagaatg 459605 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 ttattatgagaaaaagaatg 421 |||||||||||||||||||| Sbjct: 403851 ttattatgagaaaaagaatg 403870 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 ttattatgagaaaaagaatg 421 |||||||||||||||||||| Sbjct: 362958 ttattatgagaaaaagaatg 362977 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 ttattatgagaaaaagaatg 421 |||||||||||||||||||| Sbjct: 64507 ttattatgagaaaaagaatg 64526
>dbj|AB096071.1| Oryza sativa (japonica cultivar-group) mRNA for plastid sigma factor SIG5, complete cds Length = 1503 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 114 cttctcctcctcctcgtcggcgtc 137 |||||| ||||||||||||||||| Sbjct: 336 cttctcgtcctcctcgtcggcgtc 313
>dbj|AP005871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1116H04 Length = 140142 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgtcgcc 140 ||||||||| |||||||||||||| Sbjct: 75202 ctcctcctcgtcgtcggcgtcgcc 75225
>dbj|AP005405.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1111C03 Length = 144879 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgtcgcc 140 ||||||||| |||||||||||||| Sbjct: 117354 ctcctcctcgtcgtcggcgtcgcc 117377
>dbj|AP005148.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1142B04 Length = 161964 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgtcgcc 140 |||||||||||||||| ||||||| Sbjct: 141821 ctcctcctcctcgtcgccgtcgcc 141844
>dbj|AP004382.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0418E08 Length = 141040 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 tctcctcctcctcgtcggcg 135 |||||||||||||||||||| Sbjct: 90164 tctcctcctcctcgtcggcg 90145
>dbj|AK122168.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148A12, full insert sequence Length = 4471 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 105 ccttccgcccttctcctcctcctcgtcg 132 |||||| |||| |||||||||||||||| Sbjct: 176 ccttcctccctcctcctcctcctcgtcg 149
>dbj|AK121269.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105K13, full insert sequence Length = 5243 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 105 ccttccgcccttctcctcctcctcgtcg 132 |||||| |||| |||||||||||||||| Sbjct: 176 ccttcctccctcctcctcctcctcgtcg 149
>dbj|AK120942.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037I21, full insert sequence Length = 1450 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgtcgcc 140 |||||||||||||||| ||||||| Sbjct: 88 ctcctcctcctcgtcgccgtcgcc 111
>dbj|AK108365.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-D02, full insert sequence Length = 778 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgtcgcccgcc 144 |||||||||||||||| |||||| |||| Sbjct: 39 ctcctcctcctcgtcgccgtcgcgcgcc 66
>dbj|AK105697.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C12, full insert sequence Length = 1645 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 114 cttctcctcctcctcgtcggcgtc 137 |||||| ||||||||||||||||| Sbjct: 465 cttctcgtcctcctcgtcggcgtc 442
>gb|AC154416.2| Mus musculus BAC clone RP24-232F23 from 17, complete sequence Length = 167542 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 282 cactgctctttaagtagtatatct 305 ||||||||||||||||| |||||| Sbjct: 101290 cactgctctttaagtagcatatct 101267
>emb|Z62119.1|HS63G6R H.sapiens CpG island DNA genomic Mse1 fragment, clone 63g6, reverse read cpg63g6.rt1a Length = 145 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 gaaaaagaatggagagaaag 430 |||||||||||||||||||| Sbjct: 59 gaaaaagaatggagagaaag 40
>dbj|AK070329.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048G03, full insert sequence Length = 2163 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 ccgcccttctcctcctcctcgtcg 132 ||||||| |||||||||||||||| Sbjct: 95 ccgccctcctcctcctcctcgtcg 118
>dbj|AK069987.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038G16, full insert sequence Length = 4126 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ccgcccttctcctcctcctc 128 |||||||||||||||||||| Sbjct: 323 ccgcccttctcctcctcctc 304
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 tcctcctcgtcggcgtcgcc 140 |||||||||||||||||||| Sbjct: 1142734 tcctcctcgtcggcgtcgcc 1142715
>dbj|AK068203.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146A03, full insert sequence Length = 3038 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 117 ctcctcctcctcgtcggcgtcgcccgcc 144 |||||||||||||||| |||||| |||| Sbjct: 325 ctcctcctcctcgtcgtcgtcgctcgcc 298
>dbj|AK067027.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092N03, full insert sequence Length = 1093 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 ccgcccttctcctcctcctcgtcg 132 ||||||| |||||||||||||||| Sbjct: 69 ccgccctcctcctcctcctcgtcg 92
>dbj|AK066927.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091G21, full insert sequence Length = 3011 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 117 ctcctcctcctcgtcggcgtcgcccgcc 144 |||||||||||||||| |||||| |||| Sbjct: 286 ctcctcctcctcgtcgtcgtcgctcgcc 259
>emb|AL773558.14| Zebrafish DNA sequence from clone CH211-207M11 in linkage group 16, complete sequence Length = 196875 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ccgcccttctcctcctcctc 128 |||||||||||||||||||| Sbjct: 64497 ccgcccttctcctcctcctc 64478
>dbj|AK062683.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-H07, full insert sequence Length = 1021 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 tcctcctcctcgtcggcgtc 137 |||||||||||||||||||| Sbjct: 303 tcctcctcctcgtcggcgtc 322
>dbj|AK058457.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-H09, full insert sequence Length = 1236 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgtcgcc 140 ||||||||| |||||||||||||| Sbjct: 999 ctcctcctcgtcgtcggcgtcgcc 1022
>tpe|BN000093.1|HVA000093 TPA: TPA_exp: Hordeum vulgare mRNA for putative cysteine proteinase precursor (sf42 gene) Length = 1438 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 111 gcccttctcctcctcctcgtcggc 134 |||| ||||||||||||||||||| Sbjct: 45 gcccctctcctcctcctcgtcggc 68
>gb|AE003542.3| Drosophila melanogaster chromosome 3L, section 43 of 83 of the complete sequence Length = 303022 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 catccatattgtttattatg 409 |||||||||||||||||||| Sbjct: 280745 catccatattgtttattatg 280764
>dbj|AB096011.1| Oryza sativa (japonica cultivar-group) SIG5 mRNA for Sig5, complete cds Length = 1503 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 114 cttctcctcctcctcgtcggcgtc 137 |||||| ||||||||||||||||| Sbjct: 336 cttctcgtcctcctcgtcggcgtc 313
>gb|U27484.1|SHU27484 Suid herpesvirus 1 glycoprotein gII mRNA, partial cds Length = 360 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 cggcccccgccgcctccgcc 193 |||||||||||||||||||| Sbjct: 128 cggcccccgccgcctccgcc 147
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 117 ctcctcctcctcgtcggcgtcgcc 140 |||||||||||||||| ||||||| Sbjct: 23401633 ctcctcctcctcgtcgccgtcgcc 23401610
>emb|AL606613.3|OSJN00051 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K20, complete sequence Length = 116983 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgtcgcccgcc 144 |||||||||||||||| |||||| |||| Sbjct: 49422 ctcctcctcctcgtcgccgtcgcgcgcc 49449
>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162261 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgtcgcc 140 |||||||||||||||| ||||||| Sbjct: 28717 ctcctcctcctcgtcgccgtcgcc 28740
>gb|AC004104.1|AC004104 Homo sapiens 12q24 PAC RPCI5-942N13 (Roswell Park Cancer Institute Human PAC library) complete sequence Length = 136037 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ccgcccttctcctcctcctc 128 |||||||||||||||||||| Sbjct: 59425 ccgcccttctcctcctcctc 59444
>emb|CT009627.9| Mouse DNA sequence from clone RP23-71E4 on chromosome 16, complete sequence Length = 257276 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 170 ggcccggcccccgccgcctccgcc 193 |||||||||||||||| ||||||| Sbjct: 207836 ggcccggcccccgccggctccgcc 207813
>gb|AC134249.4| Mus musculus BAC clone RP23-359K17 from 12, complete sequence Length = 190423 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 105 ccttccgcccttctcctcctcctc 128 |||||| ||||||||||||||||| Sbjct: 136264 ccttcctcccttctcctcctcctc 136241
>ref|NM_001034393.1| Bos taurus secreted frizzled-related protein 2 (SFRP2), mRNA Length = 2024 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ccggcccccgccgcctccgc 192 |||||||||||||||||||| Sbjct: 174 ccggcccccgccgcctccgc 193
>emb|Y10666.1|PVCHYMOC P.vannamei chymotrypsin C gene Length = 397 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 ctcctcctcctcgtcggcgtcgcc 140 ||||||||||||||| |||||||| Sbjct: 20 ctcctcctcctcgtctgcgtcgcc 43
>dbj|AB008520.1| Thermus thermophilus MutM gene, complete cds Length = 1100 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 cccttctcctcctcctcgtc 131 |||||||||||||||||||| Sbjct: 225 cccttctcctcctcctcgtc 244 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,463,995 Number of Sequences: 3902068 Number of extensions: 5463995 Number of successful extensions: 162874 Number of sequences better than 10.0: 203 Number of HSP's better than 10.0 without gapping: 218 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 158662 Number of HSP's gapped (non-prelim): 4210 length of query: 485 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 463 effective length of database: 17,147,199,772 effective search space: 7939153494436 effective search space used: 7939153494436 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
