ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl45c07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL359073.25| Human DNA sequence from clone RP11-432F4 on chr... 46 0.095
2gb|CP000264.1| Jannaschia sp. CCS1, complete genome 44 0.37
3gb|AC167970.4| Mus musculus BAC clone RP24-471H15 from chromosom... 42 1.5
4gb|AC167978.4| Mus musculus BAC clone RP23-72M20 from chromosome... 42 1.5
5gb|AF172282.1| Oryza sativa adh1-adh2 region 42 1.5
6gb|BC019733.1| Mus musculus hypothetical protein MGC30332, mRNA ... 42 1.5
7gb|BC057315.1| Mus musculus hypothetical protein MGC30332, mRNA ... 42 1.5
8gb|AC123523.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
9gb|BC031744.1| Mus musculus cDNA clone IMAGE:4482075, with appar... 42 1.5
10gb|AC123518.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
11gb|AE005819.1| Caulobacter crescentus CB15 section 145 of 359 of... 42 1.5
12dbj|AK160974.1| Mus musculus 15 days embryo head cDNA, RIKEN ful... 42 1.5
13dbj|AK154129.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 42 1.5
14dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
15dbj|AK065129.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
16ref|NM_145580.1| Mus musculus hypothetical protein MGC30332 (MGC... 42 1.5
17gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
18gb|AC149609.5| Mus musculus BAC clone RP23-442K4 from 7, complet... 42 1.5
19gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 5.8
20gb|AY666122.1| TT virus genotype 6 strain HEL32, complete genome 40 5.8
21gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 5.8
22gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 40 5.8
23gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 40 5.8
24gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.8
25gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 40 5.8
26gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete ge... 40 5.8
27ref|XM_799492.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 5.8
28gb|AC127335.4| Mus musculus BAC clone RP23-150G24 from 8, comple... 40 5.8
29ref|XM_807625.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 5.8
30gb|AC137267.2| Genomic sequence for Oryza sativa, Nipponbare str... 40 5.8
31gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 5.8
32emb|X95251.1|DMTIDT4M D.melanogaster l(2)tid gene (strain bIf, l... 40 5.8
33emb|X95249.1|DMTIDT2M D.melanogaster l(2)tid gene (strain b IF, ... 40 5.8
34emb|X95247.1|DMTIDB D.melanogaster l(2)tid gene (strain bIf) 40 5.8
35emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 5.8
36emb|X95252.1|DNNOTT4M D.melanogaster l(2)not gene (strain bIf, l... 40 5.8
37emb|X95250.1|DMNOTT2M D.melanogaster l(2)not gene (strain bIf, l... 40 5.8
38emb|X95248.1|DMNOTB D.melanogaster l(2)not gene (strain bIf) 40 5.8
39ref|NM_079105.2| Drosophila melanogaster lethal (2) neighbor of ... 40 5.8
40gb|AY061582.1| Drosophila melanogaster SD03142 full length cDNA 40 5.8
41gb|CP000249.1| Frankia sp. CcI3, complete genome 40 5.8
42gb|AC010842.5|AC010842 Drosophila melanogaster, chromosome 2R, r... 40 5.8
43dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
44dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
45gb|BT024214.1| Drosophila melanogaster RE22828 full insert cDNA 40 5.8
46gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 40 5.8
47dbj|AP004740.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
48gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69... 40 5.8 
>emb|AL359073.25| Human DNA sequence from clone RP11-432F4 on chromosome 9 Contains the
             5' end of the gene for regulator of differentiation 1
             (ROD1), a ribosomal protein L32 (RPL32) pseudogene and a
             CpG island.n, complete sequence
          Length = 64850

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 196   gcagtgcgcggcgccggcggccg 218
             |||||||||||||||||||||||
Sbjct: 19589 gcagtgcgcggcgccggcggccg 19567
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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                 
Query: 166     ggcgcggcggtggcagtgctgctcctcgcggcag 199
               |||||||||||||||| |||| ||| ||||||||
Sbjct: 1796416 ggcgcggcggtggcagagctgttccgcgcggcag 1796449
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>gb|AC167970.4| Mus musculus BAC clone RP24-471H15 from chromosome 7, complete sequence
          Length = 238950

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 171   ggcggtggcagtgctgctcct 191
             |||||||||||||||||||||
Sbjct: 54046 ggcggtggcagtgctgctcct 54026
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>gb|AC167978.4| Mus musculus BAC clone RP23-72M20 from chromosome 7, complete sequence
          Length = 214959

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 171    ggcggtggcagtgctgctcct 191
              |||||||||||||||||||||
Sbjct: 188754 ggcggtggcagtgctgctcct 188734
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>gb|AF172282.1| Oryza sativa adh1-adh2 region
          Length = 339485

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 264    cgagctctggatcgccggattcgcggcgg 292
              ||||||| ||||||||||||||| |||||
Sbjct: 331175 cgagctccggatcgccggattcgtggcgg 331147
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>gb|BC019733.1| Mus musculus hypothetical protein MGC30332, mRNA (cDNA clone
           MGC:30332 IMAGE:3676256), complete cds
          Length = 1253

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 171 ggcggtggcagtgctgctcct 191
           |||||||||||||||||||||
Sbjct: 166 ggcggtggcagtgctgctcct 186
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>gb|BC057315.1| Mus musculus hypothetical protein MGC30332, mRNA (cDNA clone
            IMAGE:6811485), partial cds
          Length = 2910

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 171  ggcggtggcagtgctgctcct 191
            |||||||||||||||||||||
Sbjct: 1828 ggcggtggcagtgctgctcct 1848
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>gb|AC123523.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
            OSJNBa0051P13, complete sequence
          Length = 142241

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 264  cgagctctggatcgccggattcgcggcgg 292
            ||||||| ||||||||||||||| |||||
Sbjct: 2442 cgagctccggatcgccggattcgtggcgg 2470
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>gb|BC031744.1| Mus musculus cDNA clone IMAGE:4482075, with apparent retained intron
          Length = 2735

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 171  ggcggtggcagtgctgctcct 191
            |||||||||||||||||||||
Sbjct: 1730 ggcggtggcagtgctgctcct 1750
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>gb|AC123518.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
            OSJNBb0088N01, complete sequence
          Length = 123954

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 264  cgagctctggatcgccggattcgcggcgg 292
            ||||||| ||||||||||||||| |||||
Sbjct: 8314 cgagctccggatcgccggattcgtggcgg 8286
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>gb|AE005819.1| Caulobacter crescentus CB15 section 145 of 359 of the complete genome
          Length = 10591

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 277  gccggattcgcggcggactgg 297
            |||||||||||||||||||||
Sbjct: 5556 gccggattcgcggcggactgg 5576
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>dbj|AK160974.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
            library, clone:4022425H17 product:U2 small nuclear RNA
            auxiliary factor 1-like 4, full insert sequence
          Length = 3009

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 171  ggcggtggcagtgctgctcct 191
            |||||||||||||||||||||
Sbjct: 1742 ggcggtggcagtgctgctcct 1762
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>dbj|AK154129.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630003I17
           product:U2 small nuclear RNA auxiliary factor 1-like 4,
           full insert sequence
          Length = 1183

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 171 ggcggtggcagtgctgctcct 191
           |||||||||||||||||||||
Sbjct: 123 ggcggtggcagtgctgctcct 143
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 264     cgagctctggatcgccggattcgcggcgg 292
               ||||||| ||||||||||||||| |||||
Sbjct: 5341901 cgagctccggatcgccggattcgtggcgg 5341929
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>dbj|AK065129.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001P12, full
           insert sequence
          Length = 3797

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 264 cgagctctggatcgccggattcgcggcgg 292
           ||||||| ||||||||||||||| |||||
Sbjct: 292 cgagctccggatcgccggattcgtggcgg 320
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>ref|NM_145580.1| Mus musculus hypothetical protein MGC30332 (MGC30332), mRNA
          Length = 1253

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 171 ggcggtggcagtgctgctcct 191
           |||||||||||||||||||||
Sbjct: 166 ggcggtggcagtgctgctcct 186
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 264     cgagctctggatcgccggattcgcggcgg 292
               ||||||| ||||||||||||||| |||||
Sbjct: 5408378 cgagctccggatcgccggattcgtggcgg 5408406
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>gb|AC149609.5| Mus musculus BAC clone RP23-442K4 from 7, complete sequence
          Length = 196912

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 171   ggcggtggcagtgctgctcct 191
             |||||||||||||||||||||
Sbjct: 90919 ggcggtggcagtgctgctcct 90939
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 201     gcgcggcgccggcggccgacgacg 224
               ||||| ||||||||||||||||||
Sbjct: 3209265 gcgcgccgccggcggccgacgacg 3209242



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 199     gtgcgcggcgccggcggccg 218
               ||||||||||||||||||||
Sbjct: 1090101 gtgcgcggcgccggcggccg 1090082
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>gb|AY666122.1| TT virus genotype 6 strain HEL32, complete genome
          Length = 3748

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 2    ctccagtccacagacccaaa 21
            ||||||||||||||||||||
Sbjct: 2499 ctccagtccacagacccaaa 2518
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 199     gtgcgcggcgccggcggccg 218
               ||||||||||||||||||||
Sbjct: 2108771 gtgcgcggcgccggcggccg 2108790



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 199     gtgcgcggcgccggcggccg 218
               ||||||||||||||||||||
Sbjct: 1418423 gtgcgcggcgccggcggccg 1418404



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 201    gcgcggcgccggcggccgacgacg 224
              ||||| ||||||||||||||||||
Sbjct: 771879 gcgcgccgccggcggccgacgacg 771902
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>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 226    atccctgcgggccttcgccgcgcg 249
              ||||||||||| ||||||||||||
Sbjct: 715400 atccctgcggggcttcgccgcgcg 715423
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>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 157    agcttatccggcgcggcggt 176
              ||||||||||||||||||||
Sbjct: 402980 agcttatccggcgcggcggt 402999
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 204      cggcgccggcggccgacgac 223
                ||||||||||||||||||||
Sbjct: 10722197 cggcgccggcggccgacgac 10722178
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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 162     atccggcgcggcggtggcag 181
               ||||||||||||||||||||
Sbjct: 1571541 atccggcgcggcggtggcag 1571522
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>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome
          Length = 138390

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 199   gtgcgcggcgccggcggccg 218
             ||||||||||||||||||||
Sbjct: 17196 gtgcgcggcgccggcggccg 17177
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>ref|XM_799492.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053511143.12) partial mRNA
          Length = 1791

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 162  atccggcgcggcggtggcag 181
            ||||||||||||||||||||
Sbjct: 1428 atccggcgcggcggtggcag 1447
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>gb|AC127335.4| Mus musculus BAC clone RP23-150G24 from 8, complete sequence
          Length = 215910

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     ctccagtccacagacccaaa 21
             ||||||||||||||||||||
Sbjct: 88503 ctccagtccacagacccaaa 88484
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>ref|XM_807625.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053510519.149) partial mRNA
          Length = 1688

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 162  atccggcgcggcggtggcag 181
            ||||||||||||||||||||
Sbjct: 1410 atccggcgcggcggtggcag 1429
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>gb|AC137267.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0032G21, from chromosome 3, complete sequence
          Length = 187621

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 204    cggcgccggcggccgacgac 223
              ||||||||||||||||||||
Sbjct: 139111 cggcgccggcggccgacgac 139092
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 166    ggcgcggcggtggcagtgct 185
              ||||||||||||||||||||
Sbjct: 546868 ggcgcggcggtggcagtgct 546887
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>emb|X95251.1|DMTIDT4M D.melanogaster l(2)tid gene (strain bIf, l(2)tid4 mutant)
          Length = 3940

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 173 cggtggcagtgctgctcctc 192
           ||||||||||||||||||||
Sbjct: 824 cggtggcagtgctgctcctc 805
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>emb|X95249.1|DMTIDT2M D.melanogaster l(2)tid gene (strain b IF, l(2)tid2 mutant)
          Length = 3917

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 173 cggtggcagtgctgctcctc 192
           ||||||||||||||||||||
Sbjct: 824 cggtggcagtgctgctcctc 805
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>emb|X95247.1|DMTIDB D.melanogaster l(2)tid gene (strain bIf)
          Length = 3940

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 173 cggtggcagtgctgctcctc 192
           ||||||||||||||||||||
Sbjct: 824 cggtggcagtgctgctcctc 805
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 199     gtgcgcggcgccggcggccg 218
               ||||||||||||||||||||
Sbjct: 2264448 gtgcgcggcgccggcggccg 2264429



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 199     gtgcgcggcgccggcggccg 218
               ||||||||||||||||||||
Sbjct: 1290357 gtgcgcggcgccggcggccg 1290338



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 201    gcgcggcgccggcggccgacgacg 224
              ||||| ||||||||||||||||||
Sbjct: 580525 gcgcgccgccggcggccgacgacg 580548
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>emb|X95252.1|DNNOTT4M D.melanogaster l(2)not gene (strain bIf, l(2)tid4 mutant)
          Length = 2526

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 173  cggtggcagtgctgctcctc 192
            ||||||||||||||||||||
Sbjct: 1435 cggtggcagtgctgctcctc 1454
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>emb|X95250.1|DMNOTT2M D.melanogaster l(2)not gene (strain bIf, l(2)tid2 mutant)
          Length = 2503

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 173  cggtggcagtgctgctcctc 192
            ||||||||||||||||||||
Sbjct: 1412 cggtggcagtgctgctcctc 1431
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>emb|X95248.1|DMNOTB D.melanogaster l(2)not gene (strain bIf)
          Length = 2526

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 173  cggtggcagtgctgctcctc 192
            ||||||||||||||||||||
Sbjct: 1435 cggtggcagtgctgctcctc 1454
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>ref|NM_079105.2| Drosophila melanogaster lethal (2) neighbor of tid CG4084-RA
            (l(2)not), mRNA
          Length = 3502

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 173  cggtggcagtgctgctcctc 192
            ||||||||||||||||||||
Sbjct: 2411 cggtggcagtgctgctcctc 2430
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>gb|AY061582.1| Drosophila melanogaster SD03142 full length cDNA
          Length = 1079

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 cggtggcagtgctgctcctc 192
           ||||||||||||||||||||
Sbjct: 4   cggtggcagtgctgctcctc 23
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 228     ccctgcgggccttcgccgcg 247
               ||||||||||||||||||||
Sbjct: 3124792 ccctgcgggccttcgccgcg 3124811
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>gb|AC010842.5|AC010842 Drosophila melanogaster, chromosome 2R, region 59F5-59F8, BAC clone
             BACR02E09, complete sequence
          Length = 175118

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   cggtggcagtgctgctcctc 192
             ||||||||||||||||||||
Sbjct: 50119 cggtggcagtgctgctcctc 50100
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 164     ccggcgcggcggtggcagtg 183
               ||||||||||||||||||||
Sbjct: 8500580 ccggcgcggcggtggcagtg 8500561
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 204      cggcgccggcggccgacgac 223
                ||||||||||||||||||||
Sbjct: 10720298 cggcgccggcggccgacgac 10720279
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>gb|BT024214.1| Drosophila melanogaster RE22828 full insert cDNA
          Length = 1716

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 cggtggcagtgctgctcctc 192
           ||||||||||||||||||||
Sbjct: 611 cggtggcagtgctgctcctc 630
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 260     ggctcgagctctggatcgcc 279
               ||||||||||||||||||||
Sbjct: 2289386 ggctcgagctctggatcgcc 2289367
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>dbj|AP004740.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0092H22
          Length = 165194

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 164    ccggcgcggcggtggcagtg 183
              ||||||||||||||||||||
Sbjct: 115281 ccggcgcggcggtggcagtg 115262
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>gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69 of 73 of the complete
              sequence
          Length = 598988

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 173    cggtggcagtgctgctcctc 192
              ||||||||||||||||||||
Sbjct: 227717 cggtggcagtgctgctcctc 227698


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,425,940
Number of Sequences: 3902068
Number of extensions: 2425940
Number of successful extensions: 51863
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50732
Number of HSP's gapped (non-prelim): 1131
length of query: 434
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 412
effective length of database: 17,147,199,772
effective search space: 7064646306064
effective search space used: 7064646306064
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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