ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl45c03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BGAL_MALDO (P48981) Beta-galactosidase precursor (EC 3.2.1.23) (... 56 4e-08
2BGAL_ASPOF (P45582) Beta-galactosidase precursor (EC 3.2.1.23) (... 55 8e-08
3BGAL_LYCES (P48980) Beta-galactosidase precursor (EC 3.2.1.23) (... 53 3e-07
4BGAL_BRAOL (P49676) Beta-galactosidase precursor (EC 3.2.1.23) (... 52 5e-07
5BGAL_DIACA (Q00662) Putative beta-galactosidase precursor (EC 3.... 49 6e-06

>BGAL_MALDO (P48981) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid|
           beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase)
          Length = 731

 Score = 56.2 bits (134), Expect = 4e-08
 Identities = 21/36 (58%), Positives = 34/36 (94%)
 Frame = +1

Query: 346 TSAATNVTYDHRALVIDGVRRVLVSGSIHYPRSTPD 453
           ++A+ +V+YDH+A++I+G +R+L+SGSIHYPRSTP+
Sbjct: 20  SAASASVSYDHKAIIINGQKRILISGSIHYPRSTPE 55



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>BGAL_ASPOF (P45582) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)|
          Length = 832

 Score = 55.1 bits (131), Expect = 8e-08
 Identities = 21/35 (60%), Positives = 31/35 (88%)
 Frame = +1

Query: 349 SAATNVTYDHRALVIDGVRRVLVSGSIHYPRSTPD 453
           +   +VTYDH++++I+G RR+L+SGSIHYPRSTP+
Sbjct: 22  AVTASVTYDHKSVIINGQRRILISGSIHYPRSTPE 56



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>BGAL_LYCES (P48980) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid|
           beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase)
          Length = 835

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 19/31 (61%), Positives = 30/31 (96%)
 Frame = +1

Query: 361 NVTYDHRALVIDGVRRVLVSGSIHYPRSTPD 453
           +V+YDH+A++++G R++L+SGSIHYPRSTP+
Sbjct: 23  SVSYDHKAIIVNGQRKILISGSIHYPRSTPE 53



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>BGAL_BRAOL (P49676) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)|
          Length = 828

 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 23/37 (62%), Positives = 31/37 (83%)
 Frame = +1

Query: 343 GTSAATNVTYDHRALVIDGVRRVLVSGSIHYPRSTPD 453
           G++ +T V++D RA+ IDG RR+L+SGSIHYPRST D
Sbjct: 20  GSANSTIVSHDERAITIDGQRRILLSGSIHYPRSTSD 56



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>BGAL_DIACA (Q00662) Putative beta-galactosidase precursor (EC 3.2.1.23)|
           (Lactase) (SR12 protein)
          Length = 731

 Score = 48.9 bits (115), Expect = 6e-06
 Identities = 21/31 (67%), Positives = 27/31 (87%)
 Frame = +1

Query: 361 NVTYDHRALVIDGVRRVLVSGSIHYPRSTPD 453
           NV YD+RA+ I+  RR+L+SGSIHYPRSTP+
Sbjct: 30  NVWYDYRAIKINDQRRILLSGSIHYPRSTPE 60


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.129    0.370 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,594,859
Number of Sequences: 219361
Number of extensions: 393010
Number of successful extensions: 1165
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1165
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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