ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl45b03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_197209.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0078O01.11), mRNA Length = 1423 Score = 65.9 bits (33), Expect = 9e-08 Identities = 62/71 (87%), Gaps = 3/71 (4%) Strand = Plus / Plus Query: 298 ttcatgcccctggccgaccggattcgcgaccacctcggcgtctccttcccgcgcatcaac 357 ||||| ||||| ||||||||||| ||||||| |||||| | | ||||||||||||||| Sbjct: 243 ttcatccccctcgccgaccggatccgcgacc---tcggcgccgcgttcccgcgcatcaac 299 Query: 358 ctcgacggcct 368 ||||||||||| Sbjct: 300 ctcgacggcct 310 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 cgccgcttcatgcaggagcag 258 ||||||||||||||||||||| Sbjct: 171 cgccgcttcatgcaggagcag 191
>gb|AC079888.10| Oryza sativa chromosome 10 BAC OSJNBa0078O01 genomic sequence, complete sequence Length = 146664 Score = 65.9 bits (33), Expect = 9e-08 Identities = 62/71 (87%), Gaps = 3/71 (4%) Strand = Plus / Plus Query: 298 ttcatgcccctggccgaccggattcgcgaccacctcggcgtctccttcccgcgcatcaac 357 ||||| ||||| ||||||||||| ||||||| |||||| | | ||||||||||||||| Sbjct: 117163 ttcatccccctcgccgaccggatccgcgacc---tcggcgccgcgttcccgcgcatcaac 117219 Query: 358 ctcgacggcct 368 ||||||||||| Sbjct: 117220 ctcgacggcct 117230 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 cgccgcttcatgcaggagcag 258 ||||||||||||||||||||| Sbjct: 117091 cgccgcttcatgcaggagcag 117111
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 65.9 bits (33), Expect = 9e-08 Identities = 62/71 (87%), Gaps = 3/71 (4%) Strand = Plus / Plus Query: 298 ttcatgcccctggccgaccggattcgcgaccacctcggcgtctccttcccgcgcatcaac 357 ||||| ||||| ||||||||||| ||||||| |||||| | | ||||||||||||||| Sbjct: 18613352 ttcatccccctcgccgaccggatccgcgacc---tcggcgccgcgttcccgcgcatcaac 18613408 Query: 358 ctcgacggcct 368 ||||||||||| Sbjct: 18613409 ctcgacggcct 18613419 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 cgccgcttcatgcaggagcag 258 ||||||||||||||||||||| Sbjct: 18613280 cgccgcttcatgcaggagcag 18613300
>dbj|AK058495.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-E10, full insert sequence Length = 1334 Score = 65.9 bits (33), Expect = 9e-08 Identities = 62/71 (87%), Gaps = 3/71 (4%) Strand = Plus / Plus Query: 298 ttcatgcccctggccgaccggattcgcgaccacctcggcgtctccttcccgcgcatcaac 357 ||||| ||||| ||||||||||| ||||||| |||||| | | ||||||||||||||| Sbjct: 258 ttcatccccctcgccgaccggatccgcgacc---tcggcgccgcgttcccgcgcatcaac 314 Query: 358 ctcgacggcct 368 ||||||||||| Sbjct: 315 ctcgacggcct 325 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 cgccgcttcatgcaggagcag 258 ||||||||||||||||||||| Sbjct: 186 cgccgcttcatgcaggagcag 206
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 65.9 bits (33), Expect = 9e-08 Identities = 62/71 (87%), Gaps = 3/71 (4%) Strand = Plus / Plus Query: 298 ttcatgcccctggccgaccggattcgcgaccacctcggcgtctccttcccgcgcatcaac 357 ||||| ||||| ||||||||||| ||||||| |||||| | | ||||||||||||||| Sbjct: 18624205 ttcatccccctcgccgaccggatccgcgacc---tcggcgccgcgttcccgcgcatcaac 18624261 Query: 358 ctcgacggcct 368 ||||||||||| Sbjct: 18624262 ctcgacggcct 18624272 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 cgccgcttcatgcaggagcag 258 ||||||||||||||||||||| Sbjct: 18624133 cgccgcttcatgcaggagcag 18624153
>gb|AF311103.5| Homo sapiens chromosome 8 clone SCb-212E3 map p21-p11, complete sequence Length = 234429 Score = 46.1 bits (23), Expect = 0.083 Identities = 23/23 (100%) Strand = Plus / Minus Query: 76 cttcctctcttctccttctccac 98 ||||||||||||||||||||||| Sbjct: 46861 cttcctctcttctccttctccac 46839
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.083 Identities = 23/23 (100%) Strand = Plus / Minus Query: 199 gcggcggcggcggccccgcggca 221 ||||||||||||||||||||||| Sbjct: 26339564 gcggcggcggcggccccgcggca 26339542
>dbj|AK068845.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013166D16, full insert sequence Length = 2990 Score = 46.1 bits (23), Expect = 0.083 Identities = 23/23 (100%) Strand = Plus / Plus Query: 199 gcggcggcggcggccccgcggca 221 ||||||||||||||||||||||| Sbjct: 134 gcggcggcggcggccccgcggca 156
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 46.1 bits (23), Expect = 0.083 Identities = 23/23 (100%) Strand = Plus / Minus Query: 198 cgcggcggcggcggccccgcggc 220 ||||||||||||||||||||||| Sbjct: 628965 cgcggcggcggcggccccgcggc 628943
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.083 Identities = 23/23 (100%) Strand = Plus / Minus Query: 199 gcggcggcggcggccccgcggca 221 ||||||||||||||||||||||| Sbjct: 26267732 gcggcggcggcggccccgcggca 26267710
>emb|AL731885.4|CNS08C8P Oryza sativa chromosome 12, . BAC OSJNBb0016A10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133978 Score = 46.1 bits (23), Expect = 0.083 Identities = 23/23 (100%) Strand = Plus / Minus Query: 199 gcggcggcggcggccccgcggca 221 ||||||||||||||||||||||| Sbjct: 103548 gcggcggcggcggccccgcggca 103526
>emb|AL845347.4|CNS08CB9 Oryza sativa chromosome 12, . BAC OSJNBb0101I10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131689 Score = 46.1 bits (23), Expect = 0.083 Identities = 23/23 (100%) Strand = Plus / Minus Query: 199 gcggcggcggcggccccgcggca 221 ||||||||||||||||||||||| Sbjct: 53836 gcggcggcggcggccccgcggca 53814
>ref|XM_416701.1| PREDICTED: Gallus gallus similar to MAK-V/Hunk (LOC418493), mRNA Length = 3626 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 198 cgcggcggcggcggccccgcgg 219 |||||||||||||||||||||| Sbjct: 750 cgcggcggcggcggccccgcgg 771
>gb|AC166178.10| Mus musculus 6 BAC RP24-414G20 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 173015 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Minus Query: 71 ctccccttcctctcttctccttctcc 96 ||||||| |||||||||||||||||| Sbjct: 74386 ctcccctccctctcttctccttctcc 74361
>gb|AC145332.48| Felis catus clone rp86-207p24, complete sequence Length = 165072 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 199 gcggcggcggcggccccgcggc 220 |||||||||||||||||||||| Sbjct: 105866 gcggcggcggcggccccgcggc 105887
>gb|AC090459.6| Homo sapiens chromosome 18, clone RP11-125E6, complete sequence Length = 146310 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Minus Query: 71 ctccccttcctctcttctccttctcc 96 ||||||||| |||||||||||||||| Sbjct: 112344 ctccccttcttctcttctccttctcc 112319
>gb|AC099845.2| Homo sapiens chromosome 18, clone RP11-812D21, complete sequence Length = 189559 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 71 ctccccttcctctcttctccttctcc 96 ||||||||| |||||||||||||||| Sbjct: 148606 ctccccttcttctcttctccttctcc 148631
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 185 tggcgcagcgcttcgcggcggc 206 |||||||||||||||||||||| Sbjct: 4010412 tggcgcagcgcttcgcggcggc 4010391
>gb|AC016772.9| Homo sapiens BAC clone RP11-567N19 from 2, complete sequence Length = 176932 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 71 ctccccttcctctcttctccttctcc 96 |||| ||||||||||||||||||||| Sbjct: 45665 ctcctcttcctctcttctccttctcc 45690
>emb|AL805957.12| Mouse DNA sequence from clone RP23-259P7 on chromosome 4, complete sequence Length = 197911 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 75 ccttcctctcttctccttctcc 96 |||||||||||||||||||||| Sbjct: 100678 ccttcctctcttctccttctcc 100657
>ref|XM_510555.1| PREDICTED: Pan troglodytes similar to BTB (POZ) domain containing 1 (LOC453599), mRNA Length = 863 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 gcggcggcggcggccccgcgg 219 ||||||||||||||||||||| Sbjct: 288 gcggcggcggcggccccgcgg 268
>ref|NM_194151.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1194 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 cggcggcggcggccccgcggc 220 ||||||||||||||||||||| Sbjct: 924 cggcggcggcggccccgcggc 944
>gb|BT018904.1| Zea mays clone EL01T0208E01.d mRNA sequence Length = 1815 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 196 ttcgcggcggcggcggccccgcggc 220 |||||||||||||||||| |||||| Sbjct: 258 ttcgcggcggcggcggccgcgcggc 234
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 gcgcttcgcggcggcggcggc 212 ||||||||||||||||||||| Sbjct: 1557056 gcgcttcgcggcggcggcggc 1557076
>gb|AC135431.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683B12, complete sequence Length = 187523 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 gccgcgccgcttcatgcagga 254 ||||||||||||||||||||| Sbjct: 74720 gccgcgccgcttcatgcagga 74740
>ref|XM_597614.2| PREDICTED: Bos taurus similar to BTB (POZ) domain containing 1 isoform 1 (LOC519397), mRNA Length = 405 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 200 cggcggcggcggccccgcggc 220 ||||||||||||||||||||| Sbjct: 84 cggcggcggcggccccgcggc 64
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 302 tgcccctggccgaccggattc 322 ||||||||||||||||||||| Sbjct: 599898 tgcccctggccgaccggattc 599918
>ref|NM_001011885.1| Homo sapiens BTB (POZ) domain containing 1 (BTBD1), transcript variant 2, mRNA Length = 3220 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 gcggcggcggcggccccgcgg 219 ||||||||||||||||||||| Sbjct: 288 gcggcggcggcggccccgcgg 268
>ref|NM_025238.3| Homo sapiens BTB (POZ) domain containing 1 (BTBD1), transcript variant 1, mRNA Length = 3308 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 gcggcggcggcggccccgcgg 219 ||||||||||||||||||||| Sbjct: 288 gcggcggcggcggccccgcgg 268
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 gcgcttcgcggcggcggcggc 212 ||||||||||||||||||||| Sbjct: 2791385 gcgcttcgcggcggcggcggc 2791405
>ref|XM_850472.1| PREDICTED: Canis familiaris melanoma antigen (MAGE), mRNA Length = 1441 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 ttccactccccttcctctctt 86 ||||||||||||||||||||| Sbjct: 403 ttccactccccttcctctctt 423
>gb|AY364253.1| Homo sapiens clone peg6180 BTB domain containing 1 (BTBD1) mRNA, complete cds Length = 1843 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 gcggcggcggcggccccgcgg 219 ||||||||||||||||||||| Sbjct: 85 gcggcggcggcggccccgcgg 65
>emb|Z95889.1|HS211A9 Human DNA sequence from clone CTA-211A9 on chromosome 22q12.1, complete sequence Length = 117939 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 ccttcctctcttctccttctc 95 ||||||||||||||||||||| Sbjct: 34937 ccttcctctcttctccttctc 34957
>emb|AL355615.12| Human DNA sequence from clone RP11-33E24 on chromosome 6 Contains a ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3) pseudogene, two novel genes, a pseudogene similar to part of heat shock 90kD protein 1, beta (HSPCB) and a CpG island, complete sequence Length = 178362 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 67 tccactccccttcctctcttctcct 91 |||||||| |||||||||||||||| Sbjct: 26641 tccactccacttcctctcttctcct 26617
>gb|AF529369.1| Homo sapiens NS5ATP8 (NS5ATP8) mRNA, complete cds Length = 1449 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 gcggcggcggcggccccgcgg 219 ||||||||||||||||||||| Sbjct: 85 gcggcggcggcggccccgcgg 65
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 gcgcttcgcggcggcggcggc 212 ||||||||||||||||||||| Sbjct: 2531605 gcgcttcgcggcggcggcggc 2531625
>gb|AC153008.4| Mus musculus BAC clone RP23-457I7 from chromosome 15, complete sequence Length = 171878 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 ctccccttcctctcttctccttctc 95 |||| |||||||||||||||||||| Sbjct: 65910 ctcctcttcctctcttctccttctc 65934
>emb|CR385046.9| Zebrafish DNA sequence from clone CH211-217P23 in linkage group 8, complete sequence Length = 206751 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 tccccttcctctcttctcctt 92 ||||||||||||||||||||| Sbjct: 62317 tccccttcctctcttctcctt 62297
>gb|AF355402.1| Homo sapiens BTBD1 protein mRNA, complete cds Length = 3196 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 gcggcggcggcggccccgcgg 219 ||||||||||||||||||||| Sbjct: 168 gcggcggcggcggccccgcgg 148
>emb|AL136853.1|HSM801821 Homo sapiens mRNA; cDNA DKFZp434G0635 (from clone DKFZp434G0635) Length = 3177 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 gcggcggcggcggccccgcgg 219 ||||||||||||||||||||| Sbjct: 168 gcggcggcggcggccccgcgg 148
>gb|AF451977.1| Homo sapiens cask-interacting protein 1 (CASKIN1) mRNA, complete cds Length = 5761 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 ggcggcggcggccccgcggca 221 ||||||||||||||||||||| Sbjct: 38 ggcggcggcggccccgcggca 18
>emb|CR610149.1| full-length cDNA clone CS0DJ015YO21 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1653 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 gcggcggcggcggccccgcgg 219 ||||||||||||||||||||| Sbjct: 175 gcggcggcggcggccccgcgg 155
>emb|CR602779.1| full-length cDNA clone CS0DH005YO22 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1530 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 gcggcggcggcggccccgcgg 219 ||||||||||||||||||||| Sbjct: 144 gcggcggcggcggccccgcgg 124
>tpg|BK005031.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY transcription factor 28 (WRKY28) gene, complete cds Length = 4123 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 gcgcttcgcggcggcggcggc 212 ||||||||||||||||||||| Sbjct: 3523 gcgcttcgcggcggcggcggc 3503
>gb|AC007111.3| Homo sapiens chromosome 16 clone XXp1-1F8, complete sequence Length = 82806 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 ggcggcggcggccccgcggca 221 ||||||||||||||||||||| Sbjct: 55040 ggcggcggcggccccgcggca 55020
>gb|AC024270.6| Homo sapiens chromosome 15, clone RP11-382A20, complete sequence Length = 184113 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 gcggcggcggcggccccgcgg 219 ||||||||||||||||||||| Sbjct: 49450 gcggcggcggcggccccgcgg 49470
>gb|AC158635.6| Mus musculus 10 BAC RP23-396A23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 183931 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 76 cttcctctcttctccttctcc 96 ||||||||||||||||||||| Sbjct: 113491 cttcctctcttctccttctcc 113511
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 200 cggcggcggcggccccgcggc 220 ||||||||||||||||||||| Sbjct: 908870 cggcggcggcggccccgcggc 908850 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 caaccgccccgtccccgacc 35 |||||||||||||||||||| Sbjct: 28914539 caaccgccccgtccccgacc 28914520
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 gcgcttcgcggcggcggcggc 212 ||||||||||||||||||||| Sbjct: 29012993 gcgcttcgcggcggcggcggc 29013013 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 gcgcttcgcggcggcggcggc 212 ||||||||||||||||||||| Sbjct: 26127269 gcgcttcgcggcggcggcggc 26127289 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 gcggcggcggcggccccgcg 218 |||||||||||||||||||| Sbjct: 27767765 gcggcggcggcggccccgcg 27767784
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 gccgcgccgcttcatgcagga 254 ||||||||||||||||||||| Sbjct: 4980135 gccgcgccgcttcatgcagga 4980155 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 gcttcgcggcggcggcggcc 213 |||||||||||||||||||| Sbjct: 25408065 gcttcgcggcggcggcggcc 25408046 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 actccccttcctctcttctc 89 |||||||||||||||||||| Sbjct: 9074890 actccccttcctctcttctc 9074871
>gb|AF257241.1|AF257241 Homo sapiens BTB/POZ domain containing 1 protein (BTBD1) mRNA, complete cds Length = 3188 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 gcggcggcggcggccccgcgg 219 ||||||||||||||||||||| Sbjct: 167 gcggcggcggcggccccgcgg 147
>gb|AC078994.3|AC078994 Homo sapiens chromosome 2 clone RP11-16B4 containing NRXN1 gene, partial cds, complete sequence Length = 179616 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 cttcctctcttctccttctcc 96 ||||||||||||||||||||| Sbjct: 93703 cttcctctcttctccttctcc 93683
>ref|NM_001003116.1| Canis familiaris melanoma antigen (MAGE), mRNA Length = 1455 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 ttccactccccttcctctctt 86 ||||||||||||||||||||| Sbjct: 403 ttccactccccttcctctctt 423
>gb|AC009065.8| Homo sapiens chromosome 16 clone RP11-304L19, complete sequence Length = 199759 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 ggcggcggcggccccgcggca 221 ||||||||||||||||||||| Sbjct: 80923 ggcggcggcggccccgcggca 80903
>gb|AC022120.7| Homo sapiens chromosome 5 clone CTC-570I13, complete sequence Length = 169513 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 cccttcctctcttctccttct 94 ||||||||||||||||||||| Sbjct: 130699 cccttcctctcttctccttct 130719
>gb|AF187325.1|AF187325 Canis familiaris breed beagle melanoma antigen mRNA, complete cds Length = 1455 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 ttccactccccttcctctctt 86 ||||||||||||||||||||| Sbjct: 403 ttccactccccttcctctctt 423
>dbj|AP003810.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1119_A04 Length = 128906 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 200 cggcggcggcggccccgcggc 220 ||||||||||||||||||||| Sbjct: 13217 cggcggcggcggccccgcggc 13197
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 ttcatgcaggagcagcgcccg 264 ||||||||||||||||||||| Sbjct: 3955268 ttcatgcaggagcagcgcccg 3955248 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 gcgcatcaacctcgacggcc 367 |||||||||||||||||||| Sbjct: 4342233 gcgcatcaacctcgacggcc 4342214
>dbj|AP003726.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0596H10 Length = 166570 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 gcgcttcgcggcggcggcggc 212 ||||||||||||||||||||| Sbjct: 27980 gcgcttcgcggcggcggcggc 28000
>dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0062J02 Length = 151636 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 gcgcttcgcggcggcggcggc 212 ||||||||||||||||||||| Sbjct: 106514 gcgcttcgcggcggcggcggc 106534
>dbj|AK121229.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091M16, full insert sequence Length = 642 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 gcgcttcgcggcggcggcggc 212 ||||||||||||||||||||| Sbjct: 60 gcgcttcgcggcggcggcggc 40
>dbj|AK119644.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-G04, full insert sequence Length = 1335 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 gcgcttcgcggcggcggcggc 212 ||||||||||||||||||||| Sbjct: 501 gcgcttcgcggcggcggcggc 481
>dbj|AK000731.1| Homo sapiens cDNA FLJ20724 fis, clone HEP15061 Length = 2393 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 gcggcggcggcggccccgcgg 219 ||||||||||||||||||||| Sbjct: 152 gcggcggcggcggccccgcgg 132
>dbj|AK106282.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-A04, full insert sequence Length = 1413 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 gcgcttcgcggcggcggcggc 212 ||||||||||||||||||||| Sbjct: 579 gcgcttcgcggcggcggcggc 559
>dbj|AP005486.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1138_B05 Length = 113982 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 200 cggcggcggcggccccgcggc 220 ||||||||||||||||||||| Sbjct: 107626 cggcggcggcggccccgcggc 107606
>gb|BC017464.1| Homo sapiens cDNA clone IMAGE:3921768 Length = 2372 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 gcggcggcggcggccccgcgg 219 ||||||||||||||||||||| Sbjct: 115 gcggcggcggcggccccgcgg 95
>gb|BC028097.1| Homo sapiens BTB (POZ) domain containing 1, mRNA (cDNA clone MGC:39879 IMAGE:5242418), complete cds Length = 2186 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 199 gcggcggcggcggccccgcgg 219 ||||||||||||||||||||| Sbjct: 188 gcggcggcggcggccccgcgg 168
>gb|AC121136.11| Mus musculus chromosome 8, clone RP23-339I14, complete sequence Length = 202411 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ttccactccccttcctctct 85 |||||||||||||||||||| Sbjct: 75733 ttccactccccttcctctct 75752
>ref|XM_512791.1| PREDICTED: Pan troglodytes similar to hypothetical protein FLJ32926 (LOC456177), mRNA Length = 1623 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 gcttcgcggcggcggcggcc 213 |||||||||||||||||||| Sbjct: 1144 gcttcgcggcggcggcggcc 1125
>ref|XM_475710.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 486 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 gcttcgcggcggcggcggcc 213 |||||||||||||||||||| Sbjct: 37 gcttcgcggcggcggcggcc 18
>ref|XM_465029.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1200 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 gcggcggcggcggccccgcg 218 |||||||||||||||||||| Sbjct: 124 gcggcggcggcggccccgcg 143
>ref|XM_479653.1| Oryza sativa (japonica cultivar-group), mRNA Length = 627 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 caaccgccccgtccccgacc 35 |||||||||||||||||||| Sbjct: 267 caaccgccccgtccccgacc 286
>ref|XM_479566.1| Oryza sativa (japonica cultivar-group), mRNA Length = 711 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 caaccgccccgtccccgacc 35 |||||||||||||||||||| Sbjct: 468 caaccgccccgtccccgacc 487
>gb|AF259072.1| Mus musculus T-cell receptor alpha locus BAC clone MBAC1058 from 14D1-D2, complete sequence Length = 170356 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 cttcctctcttctccttctc 95 |||||||||||||||||||| Sbjct: 69949 cttcctctcttctccttctc 69968
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 tcttctccttctccacccgctcgt 106 |||||||||| ||||||||||||| Sbjct: 55873 tcttctccttttccacccgctcgt 55850
>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete sequence Length = 1438950 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 ttctccttctccacccgctc 104 |||||||||||||||||||| Sbjct: 181962 ttctccttctccacccgctc 181943
>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence Length = 1653225 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 cgcttcatgcaggagcagcg 260 |||||||||||||||||||| Sbjct: 1520176 cgcttcatgcaggagcagcg 1520195
>gb|AC093543.8| Trypanosoma brucei chromosome 3 clone RPCI93-5L5, complete sequence Length = 148711 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 cgcttcatgcaggagcagcg 260 |||||||||||||||||||| Sbjct: 94388 cgcttcatgcaggagcagcg 94407
>gb|AC159440.1| Trypanosoma brucei chromosome 3 clone RPCI93-2H15, complete sequence Length = 152294 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 cgcttcatgcaggagcagcg 260 |||||||||||||||||||| Sbjct: 19600 cgcttcatgcaggagcagcg 19619
>gb|AC104274.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1171_H02, complete sequence Length = 109969 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 actccccttcctctcttctc 89 |||||||||||||||||||| Sbjct: 56887 actccccttcctctcttctc 56868
>gb|AC147962.1| Oryza sativa chromosome 3 BAC OSJNBa0083K01 genomic sequence, complete sequence Length = 167239 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 caaccgccccgtccccgacc 35 |||||||||||||||||||| Sbjct: 51995 caaccgccccgtccccgacc 52014
>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10, complete sequence Length = 143073 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 gcttcgcggcggcggcggcc 213 |||||||||||||||||||| Sbjct: 48426 gcttcgcggcggcggcggcc 48407
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 tccccttcctctcttctccttctc 95 |||||||||||||||||| ||||| Sbjct: 33161439 tccccttcctctcttctctttctc 33161416 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 caaccgccccgtccccgacc 35 |||||||||||||||||||| Sbjct: 21033283 caaccgccccgtccccgacc 21033264
>gb|AC132284.5| Mus musculus BAC clone RP24-351O18 from chromosome 5, complete sequence Length = 174681 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 ccttcctctcttctccttct 94 |||||||||||||||||||| Sbjct: 52719 ccttcctctcttctccttct 52700
>gb|AC113031.11| Mus musculus chromosome 14, clone RP23-220B20, complete sequence Length = 250215 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 ctctcttctccttctccacc 99 |||||||||||||||||||| Sbjct: 31301 ctctcttctccttctccacc 31320
>ref|XM_838038.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0954) partial mRNA Length = 6372 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 tcttctccttctccacccgctcgt 106 |||||||||| ||||||||||||| Sbjct: 5476 tcttctccttttccacccgctcgt 5453
>ref|XM_861997.1| PREDICTED: Canis familiaris similar to latrophilin 1, transcript variant 45 (LOC610349), mRNA Length = 6220 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 ccccttcctctcttctccttctcc 96 ||||||||||||||||||| |||| Sbjct: 5534 ccccttcctctcttctcctcctcc 5557
>ref|XM_861984.1| PREDICTED: Canis familiaris similar to latrophilin 1, transcript variant 44 (LOC610349), mRNA Length = 6271 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 ccccttcctctcttctccttctcc 96 ||||||||||||||||||| |||| Sbjct: 5585 ccccttcctctcttctcctcctcc 5608
>ref|XM_861974.1| PREDICTED: Canis familiaris similar to latrophilin 1, transcript variant 43 (LOC610349), mRNA Length = 6252 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 ccccttcctctcttctccttctcc 96 ||||||||||||||||||| |||| Sbjct: 5566 ccccttcctctcttctcctcctcc 5589
>ref|XM_861962.1| PREDICTED: Canis familiaris similar to latrophilin 1, transcript variant 42 (LOC610349), mRNA Length = 6205 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 ccccttcctctcttctccttctcc 96 ||||||||||||||||||| |||| Sbjct: 5519 ccccttcctctcttctcctcctcc 5542
>ref|XM_861951.1| PREDICTED: Canis familiaris similar to latrophilin 1, transcript variant 41 (LOC610349), mRNA Length = 5998 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 ccccttcctctcttctccttctcc 96 ||||||||||||||||||| |||| Sbjct: 5312 ccccttcctctcttctcctcctcc 5335
>ref|XM_861941.1| PREDICTED: Canis familiaris similar to latrophilin 1, transcript variant 40 (LOC610349), mRNA Length = 5564 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 ccccttcctctcttctccttctcc 96 ||||||||||||||||||| |||| Sbjct: 4878 ccccttcctctcttctcctcctcc 4901
>ref|XM_861496.1| PREDICTED: Canis familiaris similar to latrophilin 1, transcript variant 2 (LOC610349), mRNA Length = 6256 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 ccccttcctctcttctccttctcc 96 ||||||||||||||||||| |||| Sbjct: 5570 ccccttcctctcttctcctcctcc 5593
>ref|XM_821826.1| Trypanosoma brucei TREU927 clone RPCI93-5L5 hypothetical protein (Tb927.3.5430) partial mRNA Length = 816 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 cgcttcatgcaggagcagcg 260 |||||||||||||||||||| Sbjct: 412 cgcttcatgcaggagcagcg 431
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 atcaaccgccccgtccccgacccc 37 ||||||||||||||||||| |||| Sbjct: 875037 atcaaccgccccgtccccgccccc 875014
>ref|XM_847107.1| PREDICTED: Canis familiaris similar to scratch homolog 1, zinc finger protein (LOC609771), mRNA Length = 327 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 201 ggcggcggcggccccgcggc 220 |||||||||||||||||||| Sbjct: 262 ggcggcggcggccccgcggc 281
>gb|AC126025.4| Mus musculus BAC clone RP24-461L18 from chromosome 14, complete sequence Length = 164636 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 cttcctctcttctccttctc 95 |||||||||||||||||||| Sbjct: 49126 cttcctctcttctccttctc 49107
>gb|BC031619.1| Homo sapiens hypothetical protein FLJ32926, mRNA (cDNA clone IMAGE:5172662), containing frame-shift errors Length = 2094 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 gcttcgcggcggcggcggcc 213 |||||||||||||||||||| Sbjct: 1080 gcttcgcggcggcggcggcc 1061
>gb|AC084054.12| Mus Musculus Strain C57BL6/J chromosome 5 BAC, RP23-137N6, complete sequence Length = 231589 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 19 ccgccccgtccccgaccccgaccc 42 |||||||| ||||||||||||||| Sbjct: 211524 ccgccccgcccccgaccccgaccc 211547
>gb|AC122196.2| Mus musculus BAC clone RP23-50P5 from 5, complete sequence Length = 151406 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 19 ccgccccgtccccgaccccgaccc 42 |||||||| ||||||||||||||| Sbjct: 16383 ccgccccgcccccgaccccgaccc 16406
>ref|XM_846570.1| PREDICTED: Canis familiaris similar to mesoderm posterior 1 (LOC609324), mRNA Length = 1063 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 gcggcggcggcggccccgcg 218 |||||||||||||||||||| Sbjct: 506 gcggcggcggcggccccgcg 525
>emb|BX842568.3| Human DNA sequence from clone RP11-31H15 on chromosome X Contains the gene for a novel protein, a transmembrane 4 superfamily member 10 (TM4SF10) pseudogene, a transcription factor Dp-1 (TFDP1) pseudogene, a novel pseudogene and two ferritin, heavy polypeptide-like 17 (FTHL17) pseudogenes, complete sequence Length = 161540 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 tccccttcctctcttctcct 91 |||||||||||||||||||| Sbjct: 27825 tccccttcctctcttctcct 27844
>gb|CP000320.1| Nitrobacter hamburgensis X14 plasmid 1, complete sequence Length = 294829 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 cgccgcgccgcttcatgcaggagc 256 ||||||||||||| |||||||||| Sbjct: 212763 cgccgcgccgctttatgcaggagc 212786
>emb|AL359314.14| Human DNA sequence from clone RP11-108L4 on chromosome 9 Contains the 5' end of the KIAA0367 gene and the 5' end of the PCA3 gene for prostate cancer antigen 3 (DD3), complete sequence Length = 128480 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 77 ttcctctcttctccttctccaccc 100 ||||||||||||||||| |||||| Sbjct: 41977 ttcctctcttctccttccccaccc 42000
>gb|AC044873.13| Homo sapiens chromosome 18, clone RP11-715C4, complete sequence Length = 179454 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 gctgaggagggccgtggcgc 190 |||||||||||||||||||| Sbjct: 40296 gctgaggagggccgtggcgc 40315
>gb|AC154715.2| Mus musculus BAC clone RP24-361A22 from chromosome 16, complete sequence Length = 172362 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 cttcctctcttctccttctc 95 |||||||||||||||||||| Sbjct: 132821 cttcctctcttctccttctc 132840
>emb|AL606668.2|OSJN00083 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064G10, complete sequence Length = 150206 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 197 tcgcggcggcggcggccccgcggcaggc 224 |||||||||||||||||| |||| |||| Sbjct: 23997 tcgcggcggcggcggccctgcgggaggc 23970
>gb|BC025752.1| Homo sapiens, clone IMAGE:5202479, mRNA Length = 2778 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 gcttcgcggcggcggcggcc 213 |||||||||||||||||||| Sbjct: 1733 gcttcgcggcggcggcggcc 1714
>dbj|AK128144.1| Homo sapiens cDNA FLJ46265 fis, clone TESTI4026680 Length = 3273 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 gcttcgcggcggcggcggcc 213 |||||||||||||||||||| Sbjct: 2281 gcttcgcggcggcggcggcc 2262
>gb|AE006012.1| Caulobacter crescentus CB15 section 338 of 359 of the complete genome Length = 10208 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cgggacgccgcgccgcttca 247 |||||||||||||||||||| Sbjct: 8014 cgggacgccgcgccgcttca 7995
>dbj|AK057488.1| Homo sapiens cDNA FLJ32926 fis, clone TESTI2007358 Length = 1907 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 gcttcgcggcggcggcggcc 213 |||||||||||||||||||| Sbjct: 915 gcttcgcggcggcggcggcc 896
>gb|AE008683.1|AE008683 Mus musculus T-cell receptor alpha/delta locus section 1 of 4 of the complete region Length = 404892 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 cttcctctcttctccttctc 95 |||||||||||||||||||| Sbjct: 69949 cttcctctcttctccttctc 69968
>gb|AC128645.5| Oryza sativa chromosome 3 BAC OSJNBb0016P23 genomic sequence, complete sequence Length = 131250 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 caaccgccccgtccccgacc 35 |||||||||||||||||||| Sbjct: 11039 caaccgccccgtccccgacc 11020
>emb|BX935886.2| Gallus gallus finished cDNA, clone ChEST162o11 Length = 1719 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ttccactccccttcctctct 85 |||||||||||||||||||| Sbjct: 90 ttccactccccttcctctct 109
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 197 tcgcggcggcggcggccccgcggcaggc 224 |||||||||||||||||| |||| |||| Sbjct: 34569876 tcgcggcggcggcggccctgcgggaggc 34569849
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 ttccactccccttcctctcttctc 89 |||| ||||||||||||||||||| Sbjct: 13297774 ttcctctccccttcctctcttctc 13297751
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 caaccgccccgtccccgacc 35 |||||||||||||||||||| Sbjct: 107666 caaccgccccgtccccgacc 107647
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 tccccttcctctcttctccttctc 95 |||||||||||||||||| ||||| Sbjct: 33251949 tccccttcctctcttctctttctc 33251926 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 caaccgccccgtccccgacc 35 |||||||||||||||||||| Sbjct: 21026312 caaccgccccgtccccgacc 21026293
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 caaccgccccgtccccgacc 35 |||||||||||||||||||| Sbjct: 19604327 caaccgccccgtccccgacc 19604346 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ttccactccccttcctctcttctc 89 |||| ||||||||||||||||||| Sbjct: 11127111 ttcctctccccttcctctcttctc 11127134 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 gcggcggcggcggccccgcg 218 |||||||||||||||||||| Sbjct: 11008598 gcggcggcggcggccccgcg 11008617
>gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genomic sequence, complete sequence Length = 144487 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 tccccttcctctcttctccttctc 95 |||||||||||||||||| ||||| Sbjct: 83116 tccccttcctctcttctctttctc 83139
>gb|AC154664.2| Mus musculus BAC clone RP24-284G3 from chromosome 14, complete sequence Length = 157658 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 ctctcttctccttctccacc 99 |||||||||||||||||||| Sbjct: 116988 ctctcttctccttctccacc 117007
>ref|NM_144577.1| Homo sapiens hypothetical protein FLJ32926 (FLJ32926), mRNA Length = 1907 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 gcttcgcggcggcggcggcc 213 |||||||||||||||||||| Sbjct: 915 gcttcgcggcggcggcggcc 896
>gb|AC008392.6|AC008392 Homo sapiens chromosome 19 clone CTC-241F20, complete sequence Length = 91842 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 gcttcgcggcggcggcggcc 213 |||||||||||||||||||| Sbjct: 53892 gcttcgcggcggcggcggcc 53911
>gb|AC010336.8| Homo sapiens chromosome 19 clone CTD-3193O13, complete sequence Length = 160770 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 atatcaaccgccccgtcccc 31 |||||||||||||||||||| Sbjct: 10667 atatcaaccgccccgtcccc 10686
>gb|AC008812.7|AC008812 Homo sapiens chromosome 19 clone CTD-2102F19, complete sequence Length = 143619 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 atatcaaccgccccgtcccc 31 |||||||||||||||||||| Sbjct: 132566 atatcaaccgccccgtcccc 132585
>dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0060O17 Length = 180015 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 caaccgccccgtccccgacc 35 |||||||||||||||||||| Sbjct: 32076 caaccgccccgtccccgacc 32057
>dbj|AP004989.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1153E06 Length = 174588 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 gcggcggcggcggccccgcg 218 |||||||||||||||||||| Sbjct: 117020 gcggcggcggcggccccgcg 117039
>dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710B08 Length = 186991 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 gcggcggcggcggccccgcg 218 |||||||||||||||||||| Sbjct: 70274 gcggcggcggcggccccgcg 70293
>dbj|AP004654.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0015C07 Length = 149079 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 caaccgccccgtccccgacc 35 |||||||||||||||||||| Sbjct: 23001 caaccgccccgtccccgacc 22982
>dbj|AP005110.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0605D08 Length = 144340 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 caaccgccccgtccccgacc 35 |||||||||||||||||||| Sbjct: 70613 caaccgccccgtccccgacc 70632
>gb|BC007730.2| Homo sapiens hypothetical protein FLJ32926, mRNA (cDNA clone IMAGE:4303744) Length = 3257 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 gcttcgcggcggcggcggcc 213 |||||||||||||||||||| Sbjct: 2217 gcttcgcggcggcggcggcc 2198
>dbj|AP005692.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0055N01 Length = 154783 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 ttccactccccttcctctcttctc 89 |||| ||||||||||||||||||| Sbjct: 119208 ttcctctccccttcctctcttctc 119185
>dbj|AP004229.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_E11 Length = 133524 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ttccactccccttcctctcttctc 89 |||| ||||||||||||||||||| Sbjct: 109805 ttcctctccccttcctctcttctc 109828
>dbj|AP004212.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1086_G08 Length = 59883 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 gcggcggcggcggccccgcg 218 |||||||||||||||||||| Sbjct: 35261 gcggcggcggcggccccgcg 35280
>dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1756_H07 Length = 217205 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 gcggcggcggcggccccgcg 218 |||||||||||||||||||| Sbjct: 214797 gcggcggcggcggccccgcg 214816
>dbj|AP003988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1057_D08 Length = 119557 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ttccactccccttcctctcttctc 89 |||| ||||||||||||||||||| Sbjct: 46290 ttcctctccccttcctctcttctc 46313
>dbj|AP005406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1147B12 Length = 127902 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 caaccgccccgtccccgacc 35 |||||||||||||||||||| Sbjct: 107666 caaccgccccgtccccgacc 107647
>dbj|AK121530.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030N24, full insert sequence Length = 1340 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 197 tcgcggcggcggcggccccgcggcaggc 224 |||||||||||||||||| |||| |||| Sbjct: 846 tcgcggcggcggcggccctgcgggaggc 819
>dbj|AK121175.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082O06, full insert sequence Length = 1733 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 gcgcttcgcggcggcggcgg 211 |||||||||||||||||||| Sbjct: 1412 gcgcttcgcggcggcggcgg 1431
>dbj|AK072995.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023147F22, full insert sequence Length = 1633 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 caaccgccccgtccccgacc 35 |||||||||||||||||||| Sbjct: 529 caaccgccccgtccccgacc 548
>dbj|AK067311.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099I21, full insert sequence Length = 1109 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 gcttcgcggcggcggcggcc 213 |||||||||||||||||||| Sbjct: 87 gcttcgcggcggcggcggcc 68
>gb|AC148872.2| Chlamydomonas reinhardtii clone cr-25P21, complete sequence Length = 45702 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 183 cgtggcgcagcgcttcgcggcggcggcg 210 ||||||| |||||| ||||||||||||| Sbjct: 2954 cgtggcggagcgctgcgcggcggcggcg 2981
>dbj|AK061586.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-C01, full insert sequence Length = 1555 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 caaccgccccgtccccgacc 35 |||||||||||||||||||| Sbjct: 451 caaccgccccgtccccgacc 470
>emb|AL732350.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0101F08, complete sequence Length = 63897 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 197 tcgcggcggcggcggccccgcggcaggc 224 |||||||||||||||||| |||| |||| Sbjct: 23412 tcgcggcggcggcggccctgcgggaggc 23385
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 ctcgacggcctggtgccgcc 377 |||||||||||||||||||| Sbjct: 394312 ctcgacggcctggtgccgcc 394293
>gb|U00089.2| Mycoplasma pneumoniae M129, complete genome Length = 816394 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 gcttcatgcaggagcagcgcccgg 265 ||||||||||||||||| |||||| Sbjct: 8757 gcttcatgcaggagcagtgcccgg 8734
>emb|AL732494.16| Mouse DNA sequence from clone RP23-322L22 on chromosome 4, complete sequence Length = 109450 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 ccttcctctcttctccttct 94 |||||||||||||||||||| Sbjct: 56744 ccttcctctcttctccttct 56725
>dbj|AP004493.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT08D16, TM0025b, complete sequence Length = 36100 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 ttcctctcttctccttctcc 96 |||||||||||||||||||| Sbjct: 13198 ttcctctcttctccttctcc 13217
>gb|AC171405.1| Mus musculus BAC clone RP23-103K10 from chromosome 17, complete sequence Length = 181342 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 ttccactccccttcctctct 85 |||||||||||||||||||| Sbjct: 99999 ttccactccccttcctctct 99980
>gb|AC121548.17| Mus musculus chromosome 5, clone RP24-86E4, complete sequence Length = 154340 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 ttcctctcttctccttctcc 96 |||||||||||||||||||| Sbjct: 44663 ttcctctcttctccttctcc 44644
>emb|AL845531.3| Mouse DNA sequence from clone RP23-232I4 on chromosome 2, complete sequence Length = 120366 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 66 ttccactccccttcctctcttctccttc 93 |||| |||||||||||||| |||||||| Sbjct: 31910 ttcctctccccttcctctcctctccttc 31883
>gb|AC161459.5| Mus musculus BAC clone RP23-117I19 from chromosome 14, complete sequence Length = 212988 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 cttcctctcttctccttctc 95 |||||||||||||||||||| Sbjct: 14005 cttcctctcttctccttctc 14024
>emb|AL591586.8| Mouse DNA sequence from clone RP23-126L18 on chromosome 2, complete sequence Length = 187043 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cctctcttctccttctccac 98 |||||||||||||||||||| Sbjct: 68214 cctctcttctccttctccac 68195
>emb|AL122083.1|HSM801230 Homo sapiens mRNA; cDNA DKFZp434D2472 (from clone DKFZp434D2472); partial cds Length = 1907 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 gcttcgcggcggcggcggcc 213 |||||||||||||||||||| Sbjct: 907 gcttcgcggcggcggcggcc 888 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,527,078 Number of Sequences: 3902068 Number of extensions: 3527078 Number of successful extensions: 236829 Number of sequences better than 10.0: 154 Number of HSP's better than 10.0 without gapping: 160 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 226668 Number of HSP's gapped (non-prelim): 10152 length of query: 384 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 362 effective length of database: 17,147,199,772 effective search space: 6207286317464 effective search space used: 6207286317464 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
