ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl45a12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PLB1_CANAL (Q9UWF6) Lysophospholipase 1 precursor (EC 3.1.1.5) (... 31 1.1
2SALL2_HUMAN (Q9Y467) Sal-like protein 2 (Zinc finger protein SAL... 31 1.4
3SALL2_MOUSE (Q9QX96) Sal-like protein 2 (Spalt-like protein 2) (... 31 1.4
4SUVH1_ARATH (Q9FF80) Histone-lysine N-methyltransferase, H3 lysi... 30 1.8
5SUVH3_ARATH (Q9C5P4) Histone-lysine N-methyltransferase, H3 lysi... 29 5.3
6YT31_CAEEL (Q10958) Hypothetical protein B0353.1 29 5.3
7TRIM3_RAT (O70277) Tripartite motif protein 3 (RING finger prote... 28 6.9
8TRIM3_MOUSE (Q9R1R2) Tripartite motif protein 3 (RING finger pro... 28 6.9
9HSLO_YERPE (Q8ZJG8) 33 kDa chaperonin (Heat shock protein 33 hom... 28 9.0
10PLB2_CANAL (O93795) Lysophospholipase 2 precursor (EC 3.1.1.5) (... 28 9.0
11ATR_XENLA (Q9DE14) Serine/threonine-protein kinase atr (EC 2.7.1... 28 9.0

>PLB1_CANAL (Q9UWF6) Lysophospholipase 1 precursor (EC 3.1.1.5) (Phospholipase|
           B 1) (CaPLB1)
          Length = 605

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -1

Query: 186 AILRRKLGWEGEERTEPCRRCYPGRCF 106
           AI+RR+   +G E+TE C+RC+   C+
Sbjct: 534 AIIRREQERQGIEQTEQCKRCFENYCW 560



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>SALL2_HUMAN (Q9Y467) Sal-like protein 2 (Zinc finger protein SALL2) (HSal2)|
          Length = 1007

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 17/37 (45%), Positives = 22/37 (59%)
 Frame = -1

Query: 216 LCLQVYTCPQAILRRKLGWEGEERTEPCRRCYPGRCF 106
           +CL+V +CP+A LR   G  G ER   C+ C  GR F
Sbjct: 635 ICLRVLSCPRA-LRLHYGQHGGERPFKCKVC--GRAF 668



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>SALL2_MOUSE (Q9QX96) Sal-like protein 2 (Spalt-like protein 2) (MSal-2)|
          Length = 1004

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 17/37 (45%), Positives = 22/37 (59%)
 Frame = -1

Query: 216 LCLQVYTCPQAILRRKLGWEGEERTEPCRRCYPGRCF 106
           +CL+V +CP+A LR   G  G ER   C+ C  GR F
Sbjct: 633 ICLRVLSCPRA-LRLHYGQHGGERPFKCKVC--GRAF 666



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>SUVH1_ARATH (Q9FF80) Histone-lysine N-methyltransferase, H3 lysine-9 specific|
           SUVH1 (EC 2.1.1.43) (Histone H3-K9 methyltransferase 1)
           (H3-K9-HMTase 1) (Suppressor of variegation 3-9 homolog
           protein 1) (Su(var)3-9 homolog protein 1) (Protein SET
           DOMAIN GR
          Length = 670

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +2

Query: 311 DYAAVLDAKPLRTLTPMFPA 370
           D   VLD KPLRTL P+FP+
Sbjct: 10  DKTRVLDIKPLRTLRPVFPS 29



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>SUVH3_ARATH (Q9C5P4) Histone-lysine N-methyltransferase, H3 lysine-9 specific|
           SUVH3 (EC 2.1.1.43) (Histone H3-K9 methyltransferase 3)
           (H3-K9-HMTase 3) (Suppressor of variegation 3-9 homolog
           protein 3) (Su(var)3-9 homolog protein 3) (Protein SET
           DOMAIN GR
          Length = 669

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = +2

Query: 311 DYAAVLDAKPLRTLTPMFP 367
           D + VLD KPLR+L P+FP
Sbjct: 17  DKSIVLDIKPLRSLKPVFP 35



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>YT31_CAEEL (Q10958) Hypothetical protein B0353.1|
          Length = 182

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 25/94 (26%), Positives = 42/94 (44%)
 Frame = +2

Query: 140 SVLSSPSQPSFLRSMACGQV*TCRQRDKEIADISPYLRKISCQLTMAGNQQPASVVLDYA 319
           S L   S P   RS + G     RQ+ +E +  SP+L   S     + +  P     +Y 
Sbjct: 13  SFLPQDSGPMLHRSPS-GAKRKIRQKREEASRPSPFLSPSSSSSQTSISPTPTETSSNYR 71

Query: 320 AVLDAKPLRTLTPMFPAPLGMHTFTPKAHPQLSV 421
           +++D+   +++ P F       +F P   P+LSV
Sbjct: 72  SLVDSGDYQSILPDFDP-----SFVPVPTPRLSV 100



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>TRIM3_RAT (O70277) Tripartite motif protein 3 (RING finger protein 22)|
           (Brain-expressed RING finger protein)
          Length = 744

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 14/52 (26%), Positives = 22/52 (42%)
 Frame = -1

Query: 219 SLCLQVYTCPQAILRRKLGWEGEERTEPCRRCYPGRCFRRPLPPSSKGIAPP 64
           S+CL  Y CP+ +              PC   +  RC +  +PP S  ++ P
Sbjct: 23  SICLDRYRCPKVL--------------PCLHTFCERCLQNYIPPQSLTLSCP 60



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>TRIM3_MOUSE (Q9R1R2) Tripartite motif protein 3 (RING finger protein 22) (RING|
           finger protein HAC1)
          Length = 744

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 14/52 (26%), Positives = 22/52 (42%)
 Frame = -1

Query: 219 SLCLQVYTCPQAILRRKLGWEGEERTEPCRRCYPGRCFRRPLPPSSKGIAPP 64
           S+CL  Y CP+ +              PC   +  RC +  +PP S  ++ P
Sbjct: 23  SICLDRYRCPKVL--------------PCLHTFCERCLQNYIPPQSLTLSCP 60



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>HSLO_YERPE (Q8ZJG8) 33 kDa chaperonin (Heat shock protein 33 homolog) (HSP33)|
          Length = 293

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
 Frame = -3

Query: 247 IRTYVSNFFVS---LPTGLHLSTGHTSEKAWLGG 155
           I   + N+F+    LPT L + TGH ++KA  GG
Sbjct: 137 IAACLENYFMQSEQLPTRLFIRTGHVADKAAAGG 170



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>PLB2_CANAL (O93795) Lysophospholipase 2 precursor (EC 3.1.1.5) (Phospholipase|
           B 2) (CaPLB2)
          Length = 608

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -1

Query: 186 AILRRKLGWEGEERTEPCRRCYPGRCF 106
           AI+RR+    G E+TE C++C+   C+
Sbjct: 533 AIIRREQERLGIEQTEQCKKCFENYCW 559



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>ATR_XENLA (Q9DE14) Serine/threonine-protein kinase atr (EC 2.7.11.1) (Ataxia|
           telangiectasia and Rad3-related protein) (Xatr)
          Length = 2654

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +2

Query: 326 LDAKPLRTLTPMFPAPLGMHT 388
           L AKPLR  TP  PAP+ M T
Sbjct: 446 LTAKPLRRNTPSVPAPVDMKT 466


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,153,531
Number of Sequences: 219361
Number of extensions: 989591
Number of successful extensions: 2752
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2750
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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