ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl45a08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC144742.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0052F16, complete sequence Length = 162082 Score = 107 bits (54), Expect = 2e-20 Identities = 69/74 (93%) Strand = Plus / Minus Query: 39 ctcgcctgcgccgcgctcgtgggcgcctccgcggccgccgcctccgcctactacctgcac 98 ||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 144328 ctcgcctgcgccgcgctggtgggcgcctccgtcgccgccgcctccggctactacctgcac 144269 Query: 99 tgccgcgccgtcgc 112 |||||| ||||||| Sbjct: 144268 tgccgctccgtcgc 144255 Score = 48.1 bits (24), Expect = 0.016 Identities = 39/44 (88%) Strand = Plus / Minus Query: 216 cgccgcgccgccgccggctcctcctcgctccccgacctctcctc 259 |||||||| |||| || || ||||||||||||||||||||||| Sbjct: 144139 cgccgcgcgcccgcgggatcgtcctcgctccccgacctctcctc 144096
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 107 bits (54), Expect = 2e-20 Identities = 69/74 (93%) Strand = Plus / Minus Query: 39 ctcgcctgcgccgcgctcgtgggcgcctccgcggccgccgcctccgcctactacctgcac 98 ||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 16352975 ctcgcctgcgccgcgctggtgggcgcctccgtcgccgccgcctccggctactacctgcac 16352916 Query: 99 tgccgcgccgtcgc 112 |||||| ||||||| Sbjct: 16352915 tgccgctccgtcgc 16352902 Score = 48.1 bits (24), Expect = 0.016 Identities = 39/44 (88%) Strand = Plus / Minus Query: 216 cgccgcgccgccgccggctcctcctcgctccccgacctctcctc 259 |||||||| |||| || || ||||||||||||||||||||||| Sbjct: 16352786 cgccgcgcgcccgcgggatcgtcctcgctccccgacctctcctc 16352743 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 62 cgcctccgcggccgccgcctccgcc 86 ||||||||||||||||||| ||||| Sbjct: 14377111 cgcctccgcggccgccgccgccgcc 14377135 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cgcggccgccgcctccgcct 87 |||||||||||||||||||| Sbjct: 29321556 cgcggccgccgcctccgcct 29321575 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 269 cgccggcggcgtcgccagggggta 292 |||||||||||||||||| ||||| Sbjct: 21152637 cgccggcggcgtcgccagcgggta 21152614 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 ccgcggccgccgcctccgcc 86 |||||||||||||||||||| Sbjct: 18355829 ccgcggccgccgcctccgcc 18355848 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 221 cgccgccgccggctcctcctcgctcccc 248 ||||||||||| ||||||||| |||||| Sbjct: 2556788 cgccgccgccgcctcctcctccctcccc 2556761
>ref|XM_988549.1| PREDICTED: Mus musculus forkhead box D1 (Foxd1), mRNA Length = 366 Score = 48.1 bits (24), Expect = 0.016 Identities = 30/32 (93%) Strand = Plus / Plus Query: 52 cgctcgtgggcgcctccgcggccgccgcctcc 83 ||||||||| |||| ||||||||||||||||| Sbjct: 242 cgctcgtggtcgccgccgcggccgccgcctcc 273
>gb|AY386263.1| Orf virus strain OV-IA82, complete genome Length = 137241 Score = 48.1 bits (24), Expect = 0.016 Identities = 24/24 (100%) Strand = Plus / Minus Query: 157 agggcggccggcagcggcggcgcc 180 |||||||||||||||||||||||| Sbjct: 134490 agggcggccggcagcggcggcgcc 134467 Score = 48.1 bits (24), Expect = 0.016 Identities = 24/24 (100%) Strand = Plus / Plus Query: 157 agggcggccggcagcggcggcgcc 180 |||||||||||||||||||||||| Sbjct: 2752 agggcggccggcagcggcggcgcc 2775
>gb|AC121839.3| Mus musculus BAC clone RP24-76E2 from chromosome 13, complete sequence Length = 182835 Score = 48.1 bits (24), Expect = 0.016 Identities = 30/32 (93%) Strand = Plus / Plus Query: 52 cgctcgtgggcgcctccgcggccgccgcctcc 83 ||||||||| |||| ||||||||||||||||| Sbjct: 77671 cgctcgtggtcgccgccgcggccgccgcctcc 77702
>gb|AC090436.37| Chlamydomonas reinhardtii clone cr-3h1, complete sequence Length = 102653 Score = 48.1 bits (24), Expect = 0.016 Identities = 27/28 (96%) Strand = Plus / Plus Query: 60 ggcgcctccgcggccgccgcctccgcct 87 ||||||||||||||||||||| |||||| Sbjct: 96708 ggcgcctccgcggccgccgccgccgcct 96735
>gb|AC090435.28| Chlamydomonas reinhardtii clone cr-32m22, complete sequence Length = 79677 Score = 48.1 bits (24), Expect = 0.016 Identities = 27/28 (96%) Strand = Plus / Minus Query: 60 ggcgcctccgcggccgccgcctccgcct 87 ||||||||||||||||||||| |||||| Sbjct: 33165 ggcgcctccgcggccgccgccgccgcct 33138
>dbj|AK142034.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230009L10 product:forkhead box D1, full insert sequence Length = 2839 Score = 48.1 bits (24), Expect = 0.016 Identities = 30/32 (93%) Strand = Plus / Plus Query: 52 cgctcgtgggcgcctccgcggccgccgcctcc 83 ||||||||| |||| ||||||||||||||||| Sbjct: 1626 cgctcgtggtcgccgccgcggccgccgcctcc 1657
>dbj|AK132390.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:4122401E09 product:forkhead box D1, full insert sequence Length = 2445 Score = 48.1 bits (24), Expect = 0.016 Identities = 30/32 (93%) Strand = Plus / Plus Query: 52 cgctcgtgggcgcctccgcggccgccgcctcc 83 ||||||||| |||| ||||||||||||||||| Sbjct: 1622 cgctcgtggtcgccgccgcggccgccgcctcc 1653
>dbj|AK164408.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230010K09 product:forkhead box D1, full insert sequence Length = 2461 Score = 48.1 bits (24), Expect = 0.016 Identities = 30/32 (93%) Strand = Plus / Plus Query: 52 cgctcgtgggcgcctccgcggccgccgcctcc 83 ||||||||| |||| ||||||||||||||||| Sbjct: 1624 cgctcgtggtcgccgccgcggccgccgcctcc 1655
>gb|DQ184476.1| Orf virus strain NZ2, complete genome Length = 137820 Score = 48.1 bits (24), Expect = 0.016 Identities = 24/24 (100%) Strand = Plus / Minus Query: 157 agggcggccggcagcggcggcgcc 180 |||||||||||||||||||||||| Sbjct: 134656 agggcggccggcagcggcggcgcc 134633 Score = 48.1 bits (24), Expect = 0.016 Identities = 24/24 (100%) Strand = Plus / Plus Query: 157 agggcggccggcagcggcggcgcc 180 |||||||||||||||||||||||| Sbjct: 3165 agggcggccggcagcggcggcgcc 3188
>gb|AY267339.1| Orf virus strain Orf-11 ORF3-like protein mRNA, complete cds Length = 573 Score = 48.1 bits (24), Expect = 0.016 Identities = 24/24 (100%) Strand = Plus / Minus Query: 157 agggcggccggcagcggcggcgcc 180 |||||||||||||||||||||||| Sbjct: 160 agggcggccggcagcggcggcgcc 137
>gb|M30023.1|ORFPRTPS Orf virus homologue of retroviral pseudoprotease gene, complete cds Length = 5003 Score = 48.1 bits (24), Expect = 0.016 Identities = 24/24 (100%) Strand = Plus / Minus Query: 157 agggcggccggcagcggcggcgcc 180 |||||||||||||||||||||||| Sbjct: 1841 agggcggccggcagcggcggcgcc 1818
>ref|XM_518732.1| PREDICTED: Pan troglodytes similar to RIKEN cDNA 6330407J23 (LOC462989), mRNA Length = 2874 Score = 46.1 bits (23), Expect = 0.065 Identities = 35/39 (89%) Strand = Plus / Minus Query: 222 gccgccgccggctcctcctcgctccccgacctctcctcc 260 |||||||||||||||||||| |||||| || ||||||| Sbjct: 537 gccgccgccggctcctcctccttccccgccccctcctcc 499
>ref|NM_205480.1| Gallus gallus myristoylated alanine-rich C kinase substrate (MARCKS) (LOC396473), mRNA Length = 1506 Score = 46.1 bits (23), Expect = 0.065 Identities = 23/23 (100%) Strand = Plus / Minus Query: 217 gccgcgccgccgccggctcctcc 239 ||||||||||||||||||||||| Sbjct: 822 gccgcgccgccgccggctcctcc 800
>emb|AL096711.9|HSJ403A15 Human DNA sequence from clone RP3-403A15 on chromosome 6q22.31-23.1 Contains the 3' end of a novel gene, the gene KIAA0408, a 60S Ribosomal protein L23 (RPL23) pseudogene and two CpG islands, complete sequence Length = 83709 Score = 46.1 bits (23), Expect = 0.065 Identities = 35/39 (89%) Strand = Plus / Plus Query: 222 gccgccgccggctcctcctcgctccccgacctctcctcc 260 |||||||||||||||||||| |||||| || ||||||| Sbjct: 82072 gccgccgccggctcctcctccttccccgccccctcctcc 82110
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 46.1 bits (23), Expect = 0.065 Identities = 23/23 (100%) Strand = Plus / Plus Query: 173 gcggcgcccgcgcgacgccgccg 195 ||||||||||||||||||||||| Sbjct: 3292597 gcggcgcccgcgcgacgccgccg 3292619 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 cgccgccggcggcgtcgcca 285 |||||||||||||||||||| Sbjct: 2590874 cgccgccggcggcgtcgcca 2590893
>emb|CR354248.1| Gallus gallus finished cDNA, clone ChEST332d4 Length = 849 Score = 46.1 bits (23), Expect = 0.065 Identities = 23/23 (100%) Strand = Plus / Minus Query: 217 gccgcgccgccgccggctcctcc 239 ||||||||||||||||||||||| Sbjct: 213 gccgcgccgccgccggctcctcc 191
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.065 Identities = 26/27 (96%) Strand = Plus / Plus Query: 215 gcgccgcgccgccgccggctcctcctc 241 ||||||||||||||||| ||||||||| Sbjct: 2595311 gcgccgcgccgccgccgtctcctcctc 2595337 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 221 cgccgccgccggctcctcctc 241 ||||||||||||||||||||| Sbjct: 17492160 cgccgccgccggctcctcctc 17492140 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 ccgcggccgccgcctccgcct 87 ||||||||||||||||||||| Sbjct: 10593668 ccgcggccgccgcctccgcct 10593648 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 gcgcccgcgcgacgccgccg 195 |||||||||||||||||||| Sbjct: 27980772 gcgcccgcgcgacgccgccg 27980753 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cactgccgcgccgtcgcgca 115 |||||||||||||||||||| Sbjct: 13283495 cactgccgcgccgtcgcgca 13283476
>dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710H01 Length = 187107 Score = 46.1 bits (23), Expect = 0.065 Identities = 26/27 (96%) Strand = Plus / Plus Query: 215 gcgccgcgccgccgccggctcctcctc 241 ||||||||||||||||| ||||||||| Sbjct: 50652 gcgccgcgccgccgccgtctcctcctc 50678
>dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0529C07 Length = 174011 Score = 46.1 bits (23), Expect = 0.065 Identities = 26/27 (96%) Strand = Plus / Plus Query: 215 gcgccgcgccgccgccggctcctcctc 241 ||||||||||||||||| ||||||||| Sbjct: 7058 gcgccgcgccgccgccgtctcctcctc 7084
>gb|BC020441.1| Homo sapiens chromosome 6 open reading frame 174, mRNA (cDNA clone IMAGE:3867603) Length = 1266 Score = 46.1 bits (23), Expect = 0.065 Identities = 35/39 (89%) Strand = Plus / Minus Query: 222 gccgccgccggctcctcctcgctccccgacctctcctcc 260 |||||||||||||||||||| |||||| || ||||||| Sbjct: 979 gccgccgccggctcctcctccttccccgccccctcctcc 941
>ref|NM_001012279.1| Homo sapiens chromosome 6 open reading frame 174 (C6orf174), mRNA Length = 3556 Score = 46.1 bits (23), Expect = 0.065 Identities = 35/39 (89%) Strand = Plus / Minus Query: 222 gccgccgccggctcctcctcgctccccgacctctcctcc 260 |||||||||||||||||||| |||||| || ||||||| Sbjct: 625 gccgccgccggctcctcctccttccccgccccctcctcc 587
>gb|M31650.1|CHKMARKS Chicken myristoylated alanine-rich C kinase substrate (MARCKS) mRNA, complete cds Length = 1506 Score = 46.1 bits (23), Expect = 0.065 Identities = 23/23 (100%) Strand = Plus / Minus Query: 217 gccgcgccgccgccggctcctcc 239 ||||||||||||||||||||||| Sbjct: 822 gccgcgccgccgccggctcctcc 800
>gb|AY549207.1| Streptomyces tubercidicus ferredoxin reductase (fre14) gene, complete cds Length = 1233 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Plus Query: 260 catctacgccgccggcggcgtcgcca 285 ||||||||||||||||| |||||||| Sbjct: 819 catctacgccgccggcgacgtcgcca 844
>gb|BC016474.1| Homo sapiens CCR4-NOT transcription complex, subunit 3, mRNA (cDNA clone MGC:17152 IMAGE:4181383), complete cds Length = 2831 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Minus Query: 62 cgcctccgcggccgccgcctccgcct 87 ||||||||| |||||||||||||||| Sbjct: 1493 cgcctccgctgccgccgcctccgcct 1468
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Minus Query: 62 cgcctccgcggccgccgcctccgcct 87 ||||||||||||||||||| |||||| Sbjct: 28246259 cgcctccgcggccgccgccgccgcct 28246234 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 ccgcggccgccgcctccgcct 87 ||||||||||||||||||||| Sbjct: 26671525 ccgcggccgccgcctccgcct 26671505 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 60 ggcgcctccgcggccgccgcctccg 84 |||||| |||||||||||||||||| Sbjct: 15465055 ggcgccgccgcggccgccgcctccg 15465079 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 gcgccgcgccgccgccggct 234 |||||||||||||||||||| Sbjct: 27428805 gcgccgcgccgccgccggct 27428786 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 218 ccgcgccgccgccggctcctcctc 241 |||||||||||||| ||||||||| Sbjct: 12369479 ccgcgccgccgccgtctcctcctc 12369456 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 255 tcctccatctacgccgccggcggc 278 |||||||||| ||||||||||||| Sbjct: 8282351 tcctccatctccgccgccggcggc 8282374 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 cgccgccgccggctcctcct 240 |||||||||||||||||||| Sbjct: 4676766 cgccgccgccggctcctcct 4676785
>gb|AY386264.1| Orf virus strain OV-SA00, complete genome Length = 139962 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 159 ggcggccggcagcggcggcgcc 180 |||||||||||||||||||||| Sbjct: 136456 ggcggccggcagcggcggcgcc 136435 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 159 ggcggccggcagcggcggcgcc 180 |||||||||||||||||||||| Sbjct: 3507 ggcggccggcagcggcggcgcc 3528
>gb|DQ218459.1| Abies alba microsatellite Sf83 sequence Length = 204 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Plus Query: 62 cgcctccgcggccgccgcctccgcct 87 ||||||||| |||||||||||||||| Sbjct: 94 cgcctccgccgccgccgcctccgcct 119
>emb|AJ628765.1| Streptomyces peucetius fdr793 gene for putative ferredoxin reductase Length = 1350 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Plus Query: 260 catctacgccgccggcggcgtcgcca 285 ||||||||||||||||| |||||||| Sbjct: 918 catctacgccgccggcgacgtcgcca 943
>gb|AC087797.5| Oryza sativa chromosome 3 BAC OSJNBb0022E02 genomic sequence, complete sequence Length = 122497 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Minus Query: 62 cgcctccgcggccgccgcctccgcct 87 ||||||||||||||||||| |||||| Sbjct: 97400 cgcctccgcggccgccgccgccgcct 97375
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Minus Query: 62 cgcctccgcggccgccgcctccgcct 87 ||||||||||||||||||| |||||| Sbjct: 28337583 cgcctccgcggccgccgccgccgcct 28337558 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 ccgcggccgccgcctccgcct 87 ||||||||||||||||||||| Sbjct: 26762848 ccgcggccgccgcctccgcct 26762828 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 60 ggcgcctccgcggccgccgcctccg 84 |||||| |||||||||||||||||| Sbjct: 15459589 ggcgccgccgcggccgccgcctccg 15459613 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 gcgccgcgccgccgccggct 234 |||||||||||||||||||| Sbjct: 27520128 gcgccgcgccgccgccggct 27520109 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 218 ccgcgccgccgccggctcctcctc 241 |||||||||||||| ||||||||| Sbjct: 12366242 ccgcgccgccgccgtctcctcctc 12366219 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 255 tcctccatctacgccgccggcggc 278 |||||||||| ||||||||||||| Sbjct: 8280186 tcctccatctccgccgccggcggc 8280209 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 cgccgccgccggctcctcct 240 |||||||||||||||||||| Sbjct: 4676881 cgccgccgccggctcctcct 4676900
>ref|NM_022855.1| Rattus norvegicus casein kinase 1, gamma 3 (Csnk1g3), mRNA Length = 2547 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 219 cgcgccgccgccggctcctcct 240 |||||||||||||||||||||| Sbjct: 368 cgcgccgccgccggctcctcct 347
>dbj|AK160386.1| Homo sapiens mRNA for FLJ00420 protein Length = 4512 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Minus Query: 62 cgcctccgcggccgccgcctccgcct 87 ||||||||| |||||||||||||||| Sbjct: 1729 cgcctccgctgccgccgcctccgcct 1704
>dbj|AB014591.1| Homo sapiens mRNA for KIAA0691 protein, partial cds Length = 4133 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Minus Query: 62 cgcctccgcggccgccgcctccgcct 87 ||||||||| |||||||||||||||| Sbjct: 2814 cgcctccgctgccgccgcctccgcct 2789
>gb|AF180474.1|AF180474 Homo sapiens Not3p (NOT3) mRNA, complete cds Length = 2142 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Minus Query: 62 cgcctccgcggccgccgcctccgcct 87 ||||||||| |||||||||||||||| Sbjct: 1266 cgcctccgctgccgccgcctccgcct 1241
>dbj|AK098901.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002B22, full insert sequence Length = 2229 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Plus Query: 62 cgcctccgcggccgccgcctccgcct 87 ||||||||||||||||||| |||||| Sbjct: 52 cgcctccgcggccgccgccgccgcct 77
>dbj|AK067052.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091C21, full insert sequence Length = 2267 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Plus Query: 62 cgcctccgcggccgccgcctccgcct 87 ||||||||||||||||||| |||||| Sbjct: 56 cgcctccgcggccgccgccgccgcct 81
>gb|U22321.1|RNU22321 Rattus norvegicus casein kinase 1 gamma 3 isoform mRNA, complete cds Length = 2547 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 219 cgcgccgccgccggctcctcct 240 |||||||||||||||||||||| Sbjct: 368 cgcgccgccgccggctcctcct 347
>emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete genome; segment 27/29 Length = 303450 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 62 cgcctccgcggccgccgcctcc 83 |||||||||||||||||||||| Sbjct: 102250 cgcctccgcggccgccgcctcc 102271
>gb|BC064495.1| Homo sapiens REST corepressor 1, mRNA (cDNA clone IMAGE:5816279), partial cds Length = 1132 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 62 cgcctccgcggccgccgcctccgcc 86 ||||||||| ||||||||||||||| Sbjct: 298 cgcctccgccgccgccgcctccgcc 322
>gb|BC051003.1| Homo sapiens REST corepressor 1, mRNA (cDNA clone IMAGE:6304446), partial cds Length = 1114 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 62 cgcctccgcggccgccgcctccgcc 86 ||||||||| ||||||||||||||| Sbjct: 298 cgcctccgccgccgccgcctccgcc 322
>ref|XM_549979.1| Oryza sativa (japonica cultivar-group), mRNA Length = 339 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 ccgcggccgccgcctccgcct 87 ||||||||||||||||||||| Sbjct: 166 ccgcggccgccgcctccgcct 146 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ccgcggccgccgcctccgcc 86 |||||||||||||||||||| Sbjct: 196 ccgcggccgccgcctccgcc 177
>ref|XM_480295.1| Oryza sativa (japonica cultivar-group), mRNA Length = 951 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 221 cgccgccgccggctcctcctcgctc 245 ||||||||||| ||||||||||||| Sbjct: 495 cgccgccgccgcctcctcctcgctc 471
>ref|XM_465904.1| Oryza sativa (japonica cultivar-group), mRNA Length = 753 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 gctcgcctgcgccgcgctcgt 58 ||||||||||||||||||||| Sbjct: 162 gctcgcctgcgccgcgctcgt 182
>ref|NM_184884.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1458 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 ccgcggccgccgcctccgcct 87 ||||||||||||||||||||| Sbjct: 181 ccgcggccgccgcctccgcct 161
>ref|XM_478983.1| Oryza sativa (japonica cultivar-group), mRNA Length = 687 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 ccggcagcggcggcgcccgcg 184 ||||||||||||||||||||| Sbjct: 610 ccggcagcggcggcgcccgcg 630
>ref|XM_514214.1| PREDICTED: Pan troglodytes LOC457755 (LOC457755), mRNA Length = 1719 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 224 cgccgccggctcctcctcgct 244 ||||||||||||||||||||| Sbjct: 6 cgccgccggctcctcctcgct 26
>ref|XM_470802.1| Oryza sativa (japonica cultivar-group), mRNA Length = 663 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 60 ggcgcctccgcggccgccgcctccg 84 |||||| |||||||||||||||||| Sbjct: 330 ggcgccgccgcggccgccgcctccg 354
>gb|AC104712.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1333_C12, complete sequence Length = 102029 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 62 cgcctccgcggccgccgcctccgcc 86 ||||||||||||||||||| ||||| Sbjct: 7819 cgcctccgcggccgccgccgccgcc 7843
>gb|AC104271.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1308_D01, complete sequence Length = 117724 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 62 cgcctccgcggccgccgcctccgcc 86 ||||||||||||||||||| ||||| Sbjct: 105897 cgcctccgcggccgccgccgccgcc 105921
>ref|XM_426094.1| PREDICTED: Gallus gallus similar to Leiomodin 1 (Leiomodin, muscle form) (64 kDa autoantigen D1) (64 kDa autoantigen 1D) (64 kDa autoantigen 1D3) (Thyroid-associated ophthalmopathy autoantigen) (Smooth muscle leiomodin) (SM-Lmod) (LOC428540), partial mRNA Length = 1957 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 221 cgccgccgccggctcctcctc 241 ||||||||||||||||||||| Sbjct: 1857 cgccgccgccggctcctcctc 1877
>ref|XM_420079.1| PREDICTED: Gallus gallus similar to apoptosis-associated tyrosine kinase (LOC422076), mRNA Length = 3489 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 gccgccggctcctcctcgctc 245 ||||||||||||||||||||| Sbjct: 2225 gccgccggctcctcctcgctc 2205
>gb|AY554354.1| Takifugu rubripes claudin 20b (cldn20b) gene, complete cds Length = 3001 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 62 cgcctccgcggccgccgcctccgcc 86 ||||||||| ||||||||||||||| Sbjct: 2350 cgcctccgccgccgccgcctccgcc 2326
>ref|XM_872994.1| PREDICTED: Bos taurus similar to splicing factor p54, transcript variant 16 (LOC513451), mRNA Length = 4197 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 62 cgcctccgcggccgccgcctccgcc 86 ||||||||| ||||||||||||||| Sbjct: 239 cgcctccgccgccgccgcctccgcc 215
>ref|XM_872908.1| PREDICTED: Bos taurus similar to splicing factor p54, transcript variant 15 (LOC513451), mRNA Length = 4290 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 62 cgcctccgcggccgccgcctccgcc 86 ||||||||| ||||||||||||||| Sbjct: 308 cgcctccgccgccgccgcctccgcc 284
>ref|XM_872806.1| PREDICTED: Bos taurus similar to splicing factor p54, transcript variant 14 (LOC513451), mRNA Length = 4137 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 62 cgcctccgcggccgccgcctccgcc 86 ||||||||| ||||||||||||||| Sbjct: 239 cgcctccgccgccgccgcctccgcc 215
>ref|XM_591132.2| PREDICTED: Bos taurus similar to splicing factor p54, transcript variant 1 (LOC513451), mRNA Length = 4188 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 62 cgcctccgcggccgccgcctccgcc 86 ||||||||| ||||||||||||||| Sbjct: 239 cgcctccgccgccgccgcctccgcc 215
>ref|XM_872310.1| PREDICTED: Bos taurus similar to splicing factor p54, transcript variant 10 (LOC513451), mRNA Length = 3864 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 62 cgcctccgcggccgccgcctccgcc 86 ||||||||| ||||||||||||||| Sbjct: 239 cgcctccgccgccgccgcctccgcc 215
>ref|XM_864072.1| PREDICTED: Bos taurus similar to splicing factor p54, transcript variant 2 (LOC513451), mRNA Length = 1268 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 62 cgcctccgcggccgccgcctccgcc 86 ||||||||| ||||||||||||||| Sbjct: 239 cgcctccgccgccgccgcctccgcc 215
>ref|XM_872000.1| PREDICTED: Bos taurus similar to splicing factor p54, transcript variant 8 (LOC513451), mRNA Length = 1772 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 62 cgcctccgcggccgccgcctccgcc 86 ||||||||| ||||||||||||||| Sbjct: 157 cgcctccgccgccgccgcctccgcc 133
>ref|XM_871899.1| PREDICTED: Bos taurus similar to splicing factor p54, transcript variant 7 (LOC513451), mRNA Length = 1667 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 62 cgcctccgcggccgccgcctccgcc 86 ||||||||| ||||||||||||||| Sbjct: 157 cgcctccgccgccgccgcctccgcc 133
>ref|XM_871808.1| PREDICTED: Bos taurus similar to splicing factor p54, transcript variant 6 (LOC513451), mRNA Length = 1012 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 62 cgcctccgcggccgccgcctccgcc 86 ||||||||| ||||||||||||||| Sbjct: 267 cgcctccgccgccgccgcctccgcc 243
>ref|XM_871711.1| PREDICTED: Bos taurus similar to splicing factor p54, transcript variant 5 (LOC513451), mRNA Length = 757 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 62 cgcctccgcggccgccgcctccgcc 86 ||||||||| ||||||||||||||| Sbjct: 258 cgcctccgccgccgccgcctccgcc 234
>ref|XM_871612.1| PREDICTED: Bos taurus similar to splicing factor p54, transcript variant 4 (LOC513451), mRNA Length = 472 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 62 cgcctccgcggccgccgcctccgcc 86 ||||||||| ||||||||||||||| Sbjct: 157 cgcctccgccgccgccgcctccgcc 133
>ref|XM_871534.1| PREDICTED: Bos taurus similar to splicing factor p54, transcript variant 3 (LOC513451), mRNA Length = 1088 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 62 cgcctccgcggccgccgcctccgcc 86 ||||||||| ||||||||||||||| Sbjct: 236 cgcctccgccgccgccgcctccgcc 212
>gb|BC111590.1| Homo sapiens REST corepressor 1, mRNA (cDNA clone MGC:133421 IMAGE:40080558), complete cds, with stop codon, in Gateway system Length = 1503 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 62 cgcctccgcggccgccgcctccgcc 86 ||||||||| ||||||||||||||| Sbjct: 93 cgcctccgccgccgccgcctccgcc 117
>gb|AC159641.2| Mus musculus BAC clone RP23-465F1 from chromosome 12, complete sequence Length = 176949 Score = 42.1 bits (21), Expect = 1.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 219 cgcgccgccgccggctcctcctcgctccccgac 251 ||||||||||||| ||||||| |||||||||| Sbjct: 47694 cgcgccgccgccgcctcctccgggctccccgac 47726
>ref|XM_846425.1| PREDICTED: Canis familiaris similar to Sp5 transcription factor (LOC609211), mRNA Length = 1182 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 62 cgcctccgcggccgccgcctccgcc 86 ||||||||||||||||||| ||||| Sbjct: 651 cgcctccgcggccgccgccgccgcc 675
>ref|XM_993956.1| PREDICTED: Mus musculus hypothetical protein LOC672503 (LOC672503), mRNA Length = 669 Score = 42.1 bits (21), Expect = 1.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 219 cgcgccgccgccggctcctcctcgctccccgac 251 ||||||||||||| ||||||| |||||||||| Sbjct: 554 cgcgccgccgccgcctcctccgggctccccgac 522
>ref|XM_976042.1| PREDICTED: Mus musculus hypothetical protein LOC674629 (LOC674629), mRNA Length = 669 Score = 42.1 bits (21), Expect = 1.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 219 cgcgccgccgccggctcctcctcgctccccgac 251 ||||||||||||| ||||||| |||||||||| Sbjct: 554 cgcgccgccgccgcctcctccgggctccccgac 522
>ref|XM_987823.1| PREDICTED: Mus musculus hypothetical protein LOC667025 (LOC667025), mRNA Length = 669 Score = 42.1 bits (21), Expect = 1.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 219 cgcgccgccgccggctcctcctcgctccccgac 251 ||||||||||||| ||||||| |||||||||| Sbjct: 554 cgcgccgccgccgcctcctccgggctccccgac 522
>ref|XM_853225.1| PREDICTED: Canis familiaris similar to neurobeachin, transcript variant 4 (LOC477305), mRNA Length = 9688 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 62 cgcctccgcggccgccgcctccgcc 86 ||||||||| ||||||||||||||| Sbjct: 109 cgcctccgccgccgccgcctccgcc 85
>ref|XM_534497.2| PREDICTED: Canis familiaris similar to neurobeachin, transcript variant 1 (LOC477305), mRNA Length = 9775 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 62 cgcctccgcggccgccgcctccgcc 86 ||||||||| ||||||||||||||| Sbjct: 109 cgcctccgccgccgccgcctccgcc 85
>ref|XM_844120.1| PREDICTED: Canis familiaris similar to neurobeachin, transcript variant 2 (LOC477305), mRNA Length = 9784 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 62 cgcctccgcggccgccgcctccgcc 86 ||||||||| ||||||||||||||| Sbjct: 109 cgcctccgccgccgccgcctccgcc 85
>gb|AC122310.2| Mus musculus BAC clone RP23-296E17 from 12, complete sequence Length = 186217 Score = 42.1 bits (21), Expect = 1.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 219 cgcgccgccgccggctcctcctcgctccccgac 251 ||||||||||||| ||||||| |||||||||| Sbjct: 182684 cgcgccgccgccgcctcctccgggctccccgac 182716
>gb|BC041305.1| Xenopus laevis purine-rich element binding protein B, mRNA (cDNA clone MGC:53603 IMAGE:4683968), complete cds Length = 1155 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 221 cgccgccgccggctcctcctc 241 ||||||||||||||||||||| Sbjct: 811 cgccgccgccggctcctcctc 791
>gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 genomic sequence, complete sequence Length = 164705 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 60 ggcgcctccgcggccgccgcctccg 84 |||||| |||||||||||||||||| Sbjct: 36471 ggcgccgccgcggccgccgcctccg 36447
>emb|CR555307.1| Azoarcus sp. EbN1 plasmid 1 Length = 207355 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 171 cggcggcgcccgcgcgacgccgccg 195 ||||||||||||| ||||||||||| Sbjct: 655 cggcggcgcccgctcgacgccgccg 631
>emb|AJ277468.1|OSA277468 Oryza sativa rbbi3-1 gene for putative Bowman Birk trypsin inhibitor Length = 17385 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 ccgcggccgccgcctccgcct 87 ||||||||||||||||||||| Sbjct: 1295 ccgcggccgccgcctccgcct 1315 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 ccgcggccgccgcctccgcc 86 |||||||||||||||||||| Sbjct: 1265 ccgcggccgccgcctccgcc 1284
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2 ccacatggactccgcctccgcctcc 26 |||| |||||||||||||||||||| Sbjct: 2681310 ccacctggactccgcctccgcctcc 2681286
>ref|NM_015156.1| Homo sapiens REST corepressor 1 (RCOR1), mRNA Length = 1449 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 62 cgcctccgcggccgccgcctccgcc 86 ||||||||| ||||||||||||||| Sbjct: 63 cgcctccgccgccgccgcctccgcc 87
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 ccgcggccgccgcctccgcct 87 ||||||||||||||||||||| Sbjct: 713204 ccgcggccgccgcctccgcct 713224
>dbj|AK077446.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730410D03 product:golgi phosphoprotein 3, full insert sequence Length = 1712 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 61 gcgcctccgcggccgccgcctccgc 85 ||||| ||||||||||||||||||| Sbjct: 32 gcgccaccgcggccgccgcctccgc 56
>gb|BC097616.1| Xenopus laevis cDNA clone IMAGE:5440317 Length = 2061 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 223 ccgccgccggctcctcctcgctccc 247 ||||||||| ||||||||||||||| Sbjct: 178 ccgccgccgcctcctcctcgctccc 154
>emb|BX933339.2| Gallus gallus finished cDNA, clone ChEST689b3 Length = 1871 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 221 cgccgccgccggctcctcctc 241 ||||||||||||||||||||| Sbjct: 186 cgccgccgccggctcctcctc 166
>gb|AC084406.7|AC084406 Oryza sativa chromosome 3 BAC OSJNBa0067E01 genomic sequence, complete sequence Length = 140044 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 ccgcggccgccgcctccgcct 87 ||||||||||||||||||||| Sbjct: 86315 ccgcggccgccgcctccgcct 86335
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 221 cgccgccgccggctcctcctcgctc 245 ||||||||||| ||||||||||||| Sbjct: 4173701 cgccgccgccgcctcctcctcgctc 4173725 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gggcggccggcagcggcggc 177 |||||||||||||||||||| Sbjct: 866175 gggcggccggcagcggcggc 866194
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 ccggcagcggcggcgcccgcg 184 ||||||||||||||||||||| Sbjct: 24124245 ccggcagcggcggcgcccgcg 24124265 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 gccgccgcctccgcctacta 91 |||||||||||||||||||| Sbjct: 29451959 gccgccgcctccgcctacta 29451978 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 167 gcagcggcggcgcccgcgcgacgccgcc 194 |||||||||||| | ||||||||||||| Sbjct: 6781351 gcagcggcggcggcggcgcgacgccgcc 6781378
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 gctcgcctgcgccgcgctcgt 58 ||||||||||||||||||||| Sbjct: 18237690 gctcgcctgcgccgcgctcgt 18237670 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 cgcctccgcggccgccgcctccgc 85 ||||||||||||||||||| |||| Sbjct: 35239351 cgcctccgcggccgccgccgccgc 35239328 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 cgccgccgccggctcctcct 240 |||||||||||||||||||| Sbjct: 31734475 cgccgccgccggctcctcct 31734494
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 ccgcggccgccgcctccgcct 87 ||||||||||||||||||||| Sbjct: 21739896 ccgcggccgccgcctccgcct 21739876 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 ccgcggccgccgcctccgcct 87 ||||||||||||||||||||| Sbjct: 1349934 ccgcggccgccgcctccgcct 1349914 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gggcggccggcagcggcggc 177 |||||||||||||||||||| Sbjct: 16005971 gggcggccggcagcggcggc 16005990 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 gcgccgcgccgccgccggct 234 |||||||||||||||||||| Sbjct: 6541023 gcgccgcgccgccgccggct 6541004 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ccgcggccgccgcctccgcc 86 |||||||||||||||||||| Sbjct: 1349964 ccgcggccgccgcctccgcc 1349945
>gb|AY860818.1| Chlamydomonas reinhardtii putative chloroplast lycopene beta cyclase precursor (LCYB) mRNA, complete cds; nuclear gene for chloroplast product Length = 3272 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 catggactccgcctccgcctc 25 ||||||||||||||||||||| Sbjct: 1397 catggactccgcctccgcctc 1377
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 260 catctacgccgccggcggcgtcgcc 284 ||||||||||||||||| ||||||| Sbjct: 6863701 catctacgccgccggcgacgtcgcc 6863725 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 176 gcgcccgcgcgacgccgccgg 196 ||||||||||||||||||||| Sbjct: 2443036 gcgcccgcgcgacgccgccgg 2443016 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 gcgccgcgccgccgccggct 234 |||||||||||||||||||| Sbjct: 6017790 gcgccgcgccgccgccggct 6017809
>dbj|AP005606.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1590_E05 Length = 148205 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 221 cgccgccgccggctcctcctcgctc 245 ||||||||||| ||||||||||||| Sbjct: 73324 cgccgccgccgcctcctcctcgctc 73348
>dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0037C04 Length = 137879 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 ccgcggccgccgcctccgcct 87 ||||||||||||||||||||| Sbjct: 47985 ccgcggccgccgcctccgcct 47965 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ccgcggccgccgcctccgcc 86 |||||||||||||||||||| Sbjct: 48015 ccgcggccgccgcctccgcc 47996
>dbj|AP005761.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1066D09 Length = 183999 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 ccgcggccgccgcctccgcct 87 ||||||||||||||||||||| Sbjct: 130375 ccgcggccgccgcctccgcct 130355
>dbj|AP003141.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0002B05 Length = 141275 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 ccgcggccgccgcctccgcct 87 ||||||||||||||||||||| Sbjct: 91947 ccgcggccgccgcctccgcct 91927
>dbj|AP004684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0012H03 Length = 163377 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 221 cgccgccgccggctcctcctc 241 ||||||||||||||||||||| Sbjct: 123201 cgccgccgccggctcctcctc 123181
>dbj|AP003846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1710_H11 Length = 136107 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 ccggcagcggcggcgcccgcg 184 ||||||||||||||||||||| Sbjct: 57660 ccggcagcggcggcgcccgcg 57680
>dbj|AP005841.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0052M16 Length = 145423 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 gctcgcctgcgccgcgctcgt 58 ||||||||||||||||||||| Sbjct: 38903 gctcgcctgcgccgcgctcgt 38883
>dbj|AP005066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0047E05 Length = 184323 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 gctcgcctgcgccgcgctcgt 58 ||||||||||||||||||||| Sbjct: 161091 gctcgcctgcgccgcgctcgt 161071
>ref|XM_318933.2| Anopheles gambiae str. PEST ENSANGP00000015878 (ENSANGG00000013389), partial mRNA Length = 1074 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 221 cgccgccgccggctcctcctc 241 ||||||||||||||||||||| Sbjct: 325 cgccgccgccggctcctcctc 305
>ref|XM_311110.2| Anopheles gambiae str. PEST ENSANGP00000017433 (ENSANGG00000014944), partial mRNA Length = 4929 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 154 ccaagggcggccggcagcggcggcg 178 |||||||| |||||||||||||||| Sbjct: 3774 ccaagggcagccggcagcggcggcg 3798
>dbj|AK105270.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-F07, full insert sequence Length = 1528 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 62 cgcctccgcggccgccgcctccgcc 86 ||||||||||||||||||| ||||| Sbjct: 217 cgcctccgcggccgccgccgccgcc 241
>dbj|AK099933.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119E02, full insert sequence Length = 4743 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 ccgcggccgccgcctccgcct 87 ||||||||||||||||||||| Sbjct: 3156 ccgcggccgccgcctccgcct 3136
>dbj|AK071944.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013087B05, full insert sequence Length = 1533 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 62 cgcctccgcggccgccgcctccgcc 86 ||||||||||||||||||| ||||| Sbjct: 222 cgcctccgcggccgccgccgccgcc 246
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 ggcggccggcagcggcggcgc 179 ||||||||||||||||||||| Sbjct: 126000 ggcggccggcagcggcggcgc 125980
>gb|AF155595.1|AF155595 Homo sapiens CoREST protein (COREST) mRNA, complete cds Length = 1449 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 62 cgcctccgcggccgccgcctccgcc 86 ||||||||| ||||||||||||||| Sbjct: 63 cgcctccgccgccgccgcctccgcc 87
>emb|AL136293.5|CNS01DVX Human chromosome 14 DNA sequence BAC C-2555C10 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 226035 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 62 cgcctccgcggccgccgcctccgcc 86 ||||||||| ||||||||||||||| Sbjct: 171698 cgcctccgccgccgccgcctccgcc 171722
>gb|AC002365.1|AC002365 Homo sapiens chromosome X clone U177G4, U152H5, U168D5, 174A6, U172D6, and U186B3 from Xp22, complete sequence Length = 196542 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 gggcggccggcagcggcggcg 178 ||||||||||||||||||||| Sbjct: 158676 gggcggccggcagcggcggcg 158696
>gb|M55089.1|RCAHYOX Rhodobacter capsulatus hydrogen oxidation genes Length = 3052 Score = 42.1 bits (21), Expect = 1.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 158 gggcggccggcagcggcggcgcccgcgcg 186 |||| |||||||| ||||||||||||||| Sbjct: 509 gggctgccggcagaggcggcgcccgcgcg 537
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 atccgccgccgccaagggcg 162 |||||||||||||||||||| Sbjct: 1637911 atccgccgccgccaagggcg 1637892
>ref|NM_188489.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1887 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 gcgccgcgccgccgccggct 234 |||||||||||||||||||| Sbjct: 1835 gcgccgcgccgccgccggct 1854
>ref|XM_468434.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2030 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 62 cgcctccgcggccgccgcctccgc 85 ||||||||||||||||||| |||| Sbjct: 242 cgcctccgcggccgccgccgccgc 265
>ref|XM_467850.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3861 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 cgccgccgccggctcctcct 240 |||||||||||||||||||| Sbjct: 414 cgccgccgccggctcctcct 395
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 cggcggcgcccgcgcgacgccgcc 194 |||||||||| ||||||||||||| Sbjct: 901486 cggcggcgccagcgcgacgccgcc 901463
>ref|NM_193933.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 444 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gggcggccggcagcggcggc 177 |||||||||||||||||||| Sbjct: 98 gggcggccggcagcggcggc 117
>ref|NM_014516.2| Homo sapiens CCR4-NOT transcription complex, subunit 3 (CNOT3), mRNA Length = 2855 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 cctccgcggccgccgcctccgcct 87 ||||||| |||||||||||||||| Sbjct: 1525 cctccgctgccgccgcctccgcct 1502
>ref|NM_185573.2| Oryza sativa (japonica cultivar-group), mRNA Length = 2968 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 gccgccgcctccgcctacta 91 |||||||||||||||||||| Sbjct: 137 gccgccgcctccgcctacta 156
>ref|XM_506591.1| PREDICTED Oryza sativa (japonica cultivar-group), P0034A04.129 mRNA Length = 2984 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 gccgccgcctccgcctacta 91 |||||||||||||||||||| Sbjct: 156 gccgccgcctccgcctacta 175
>ref|NM_186617.2| Oryza sativa (japonica cultivar-group), mRNA Length = 2691 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 167 gcagcggcggcgcccgcgcgacgccgcc 194 |||||||||||| | ||||||||||||| Sbjct: 2104 gcagcggcggcggcggcgcgacgccgcc 2077
>ref|XM_473419.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1119 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cgccggctcctcctcgctcc 246 |||||||||||||||||||| Sbjct: 126 cgccggctcctcctcgctcc 145
>ref|XM_472965.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1797 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 cctccgcggccgccgcctccgcct 87 ||||||| |||||||||||||||| Sbjct: 173 cctccgccgccgccgcctccgcct 196
>ref|NM_016441.1| Homo sapiens cysteine rich transmembrane BMP regulator 1 (chordin-like) (CRIM1), mRNA Length = 5601 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 220 gcgccgccgccggctcctcctcgc 243 |||||||||||| ||||||||||| Sbjct: 33 gcgccgccgccgcctcctcctcgc 10
>gb|BT018846.1| Zea mays clone EL01N0555A04.d mRNA sequence Length = 1672 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 ccgcggccgccgcctccgcc 86 |||||||||||||||||||| Sbjct: 530 ccgcggccgccgcctccgcc 549
>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete sequence Length = 1507550 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 235 cctcctcgctccccgacctctcctccat 262 ||||||||||||| ||||||||||||| Sbjct: 940942 cctcctcgctcccatacctctcctccat 940915
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 ctcgcctgcgccgcgctcgt 58 |||||||||||||||||||| Sbjct: 2722112 ctcgcctgcgccgcgctcgt 2722093
>gb|AC124142.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0015A05, complete sequence Length = 127330 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 221 cgccgccgccggctcctcctcgctcccc 248 ||||||||||| ||||||||| |||||| Sbjct: 41674 cgccgccgccgcctcctcctccctcccc 41647
>gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J22, complete sequence Length = 173903 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 221 cgccgccgccggctcctcctcgctcccc 248 ||||||||||| ||||||||| |||||| Sbjct: 3308 cgccgccgccgcctcctcctccctcccc 3281
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 gcgccgcgccgccgccggct 234 |||||||||||||||||||| Sbjct: 129012 gcgccgcgccgccgccggct 128993
>ref|NM_008989.1| Mus musculus purine rich element binding protein A (Pura), mRNA Length = 1609 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cgcggccgccgcctccgcct 87 |||||||||||||||||||| Sbjct: 133 cgcggccgccgcctccgcct 152
>gb|AY657340.1| Synthetic construct Peudomonas aeruginosa clone FLH043124.01F PA1203 gene, partial cds Length = 408 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 cgccgccgccaagggcggccggca 169 |||||||||| ||||||||||||| Sbjct: 112 cgccgccgccgagggcggccggca 89
>gb|AC119292.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0088F07, complete sequence Length = 139180 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 269 cgccggcggcgtcgccagggggta 292 |||||||||||||||||| ||||| Sbjct: 33420 cgccggcggcgtcgccagcgggta 33397
>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08, complete sequence Length = 142196 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cgcggccgccgcctccgcct 87 |||||||||||||||||||| Sbjct: 100213 cgcggccgccgcctccgcct 100232
>ref|NM_013286.3| Homo sapiens RNA binding motif protein 15B (RBM15B), mRNA Length = 6620 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 gcctccgcggccgccgcctccgcc 86 |||||| ||||||||||||||||| Sbjct: 28 gcctcctcggccgccgcctccgcc 51
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 ctcgcctgcgccgcgctcgt 58 |||||||||||||||||||| Sbjct: 4094600 ctcgcctgcgccgcgctcgt 4094581
>gb|AC136222.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088M05, complete sequence Length = 153368 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 ccgcggccgccgcctccgcc 86 |||||||||||||||||||| Sbjct: 149041 ccgcggccgccgcctccgcc 149060
>gb|AC131191.4| Mus musculus BAC clone RP24-464B16 from chromosome 18, complete sequence Length = 136832 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 cgcggccgccgcctccgcct 87 |||||||||||||||||||| Sbjct: 22262 cgcggccgccgcctccgcct 22243
>gb|AC130714.3| Mus musculus BAC clone RP23-367L18 from chromosome 18, complete sequence Length = 193184 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 cgcggccgccgcctccgcct 87 |||||||||||||||||||| Sbjct: 127701 cgcggccgccgcctccgcct 127682
>gb|AC120408.7| Mus musculus chromosome 5, clone RP24-433N14, complete sequence Length = 178077 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 ggcggccggcagcggcggcg 178 |||||||||||||||||||| Sbjct: 165292 ggcggccggcagcggcggcg 165311
>gb|AY280634.1| Uncultured bacterium cosmid pbiov sequence Length = 37440 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 108 gtcgcgcagctcagcggcgacatc 131 ||||||| |||||||||||||||| Sbjct: 20833 gtcgcgctgctcagcggcgacatc 20856
>ref|XM_986782.1| PREDICTED: Mus musculus hypothetical protein LOC671403 (LOC671403), mRNA Length = 1257 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ccgcggccgccgcctccgcc 86 |||||||||||||||||||| Sbjct: 470 ccgcggccgccgcctccgcc 451
>ref|XM_900516.2| PREDICTED: Mus musculus hypothetical LOC628262 (LOC628262), mRNA Length = 1083 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ccgcggccgccgcctccgcc 86 |||||||||||||||||||| Sbjct: 296 ccgcggccgccgcctccgcc 277
>ref|XM_570890.1| Cryptococcus neoformans var. neoformans JEC21 eukaryotic translation initiation factor 3 110 kda subunit (eif3 p110) (CNE03290) partial mRNA Length = 2924 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 235 cctcctcgctccccgacctctcctccat 262 ||||||||||||| ||||||||||||| Sbjct: 2845 cctcctcgctcccatacctctcctccat 2818
>ref|XM_849332.1| PREDICTED: Canis familiaris similar to Fibroblast growth factor-18 precursor (FGF-18) (zFGF5) (LOC611641), mRNA Length = 1533 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 59 gggcgcctccgcggccgccgcctccgcc 86 |||||||||||| ||||||||| ||||| Sbjct: 469 gggcgcctccgccgccgccgccgccgcc 442
>gb|AY358811.1| Homo sapiens DNA27863 FGF18 (UNQ420) mRNA, partial cds Length = 1012 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 59 gggcgcctccgcggccgccgcctccgcc 86 |||||||||||| ||||||||| ||||| Sbjct: 476 gggcgcctccgccgccgccgccgccgcc 449
>gb|AY358371.1| Homo sapiens clone DNA90842 CRIM1 (UNQ1886) mRNA, complete cds Length = 3671 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 220 gcgccgccgccggctcctcctcgc 243 |||||||||||| ||||||||||| Sbjct: 361 gcgccgccgccgcctcctcctcgc 338
>ref|XM_541235.2| PREDICTED: Canis familiaris similar to C34E11.3 (LOC484118), mRNA Length = 3449 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 gccgccgccggctcctcctc 241 |||||||||||||||||||| Sbjct: 558 gccgccgccggctcctcctc 539
>gb|BC096250.1| Homo sapiens caudal type homeobox transcription factor 1, mRNA (cDNA clone IMAGE:40005953), complete cds Length = 1109 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gggcggccggcagcggcggc 177 |||||||||||||||||||| Sbjct: 22 gggcggccggcagcggcggc 41
>emb|AL590325.10| Human DNA sequence from clone RP11-85L21 on chromosome Xq25-26.3 Contains a nucleolin (NCL) pseudogene, a zinc finger family pseudogene, three novel genes, the 3' end of a novel gene and a CpG island, complete sequence Length = 84879 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 gcctccgcggccgccgcctccgcc 86 |||||||||||||||||| ||||| Sbjct: 31512 gcctccgcggccgccgccgccgcc 31535
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 ctcgcctgcgccgcgctcgt 58 |||||||||||||||||||| Sbjct: 4506625 ctcgcctgcgccgcgctcgt 4506606 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 gcgcccgcgcgacgccgccg 195 |||||||||||||||||||| Sbjct: 3249829 gcgcccgcgcgacgccgccg 3249810
>ref|NM_001030569.1| Gallus gallus similar to hypothetical protein FLJ20718 (LOC415734), mRNA Length = 2833 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 ccgccgccggctcctcctcg 242 |||||||||||||||||||| Sbjct: 146 ccgccgccggctcctcctcg 127
>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16 Length = 349442 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 acgccgccggcggcgtcgcc 284 |||||||||||||||||||| Sbjct: 236641 acgccgccggcggcgtcgcc 236660
>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14 Length = 346301 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 acgccgccggcggcgtcgcc 284 |||||||||||||||||||| Sbjct: 242096 acgccgccggcggcgtcgcc 242115
>emb|BX640413.1| Bordetella pertussis strain Tohama I, complete genome; segment 3/12 Length = 349028 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 acgccgccggcggcgtcgcc 284 |||||||||||||||||||| Sbjct: 287556 acgccgccggcggcgtcgcc 287537
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 ctcgcctgcgccgcgctcgt 58 |||||||||||||||||||| Sbjct: 3801187 ctcgcctgcgccgcgctcgt 3801168
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29 Length = 303550 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 168 cagcggcggcgcccgcgcgacgcc 191 ||||||||||||||||||| |||| Sbjct: 154422 cagcggcggcgcccgcgcggcgcc 154399
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29 Length = 283100 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gcctccgcggccgccgcctc 82 |||||||||||||||||||| Sbjct: 35231 gcctccgcggccgccgcctc 35250
>emb|AL663000.4|OSJN00201 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0034G17, complete sequence Length = 127259 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cgccggctcctcctcgctcc 246 |||||||||||||||||||| Sbjct: 69701 cgccggctcctcctcgctcc 69682
>emb|AL606655.3|OSJN00103 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0040D15, complete sequence Length = 130618 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 163 gccggcagcggcggcgcccgcgcg 186 |||| ||||||||||||||||||| Sbjct: 70906 gccgccagcggcggcgcccgcgcg 70883
>emb|AL662946.2|OSJN00139 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991113_30, complete sequence Length = 141128 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 cctccgcggccgccgcctccgcct 87 ||||||| |||||||||||||||| Sbjct: 80952 cctccgccgccgccgcctccgcct 80975
>emb|AJ720710.1| Gallus gallus mRNA for hypothetical protein, clone 23o18 Length = 2833 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 ccgccgccggctcctcctcg 242 |||||||||||||||||||| Sbjct: 146 ccgccgccggctcctcctcg 127
>emb|AL772409.4| Mouse DNA sequence from clone RP23-323L8 on chromosome 11 Contains the 5' end of the Fgf18 gene for fibroblast growth factor 18, the Npm1 gene for nucleophosmin 1, a single-stranded DNA binding protein 1 (Ssbp1) pseudogene, the Tlx3 gene for T-cell leukemia, homeobox 3, a novel gene, the 3' end of the Ranbp17 gene for RAN binding protein 17, a glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene and four CpG islands, complete sequence Length = 161564 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 59 gggcgcctccgcggccgccgcctccgcc 86 |||||||||||| ||||||||| ||||| Sbjct: 25363 gggcgcctccgccgccgccgccgccgcc 25390
>gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0098H14, complete sequence Length = 132560 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 218 ccgcgccgccgccggctcctcctc 241 |||||||||||||| ||||||||| Sbjct: 28497 ccgcgccgccgccgtctcctcctc 28474
>gb|AC165176.2| Zea mays clone ZMMBBb-177G21, complete sequence Length = 176679 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 gcgccgcgccgccgccggct 234 |||||||||||||||||||| Sbjct: 153717 gcgccgcgccgccgccggct 153698
>gb|BC096249.1| Homo sapiens cDNA clone IMAGE:40005952 Length = 982 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gggcggccggcagcggcggc 177 |||||||||||||||||||| Sbjct: 22 gggcggccggcagcggcggc 41
>gb|BC006245.2| Homo sapiens fibroblast growth factor 18, transcript variant 1, mRNA (cDNA clone MGC:10529 IMAGE:3948893), complete cds Length = 1154 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 59 gggcgcctccgcggccgccgcctccgcc 86 |||||||||||| ||||||||| ||||| Sbjct: 76 gggcgcctccgccgccgccgccgccgcc 49
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gcctccgcggccgccgcctc 82 |||||||||||||||||||| Sbjct: 1561661 gcctccgcggccgccgcctc 1561680 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 acgccgccggcggcgtcgcc 284 |||||||||||||||||||| Sbjct: 743278 acgccgccggcggcgtcgcc 743259
>gb|AY048580.1| Homo sapiens NIMA-related kinase Nek8 mRNA, complete cds Length = 2940 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 cgccgcgccgccgccggctc 235 |||||||||||||||||||| Sbjct: 135 cgccgcgccgccgccggctc 116
>ref|NM_008005.1| Mus musculus fibroblast growth factor 18 (Fgf18), mRNA Length = 1094 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 59 gggcgcctccgcggccgccgcctccgcc 86 |||||||||||| ||||||||| ||||| Sbjct: 66 gggcgcctccgccgccgccgccgccgcc 39
>gb|AC093246.3| Homo sapiens chromosome 5 clone RP11-117L6, complete sequence Length = 175154 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 59 gggcgcctccgcggccgccgcctccgcc 86 |||||||||||| ||||||||| ||||| Sbjct: 74941 gggcgcctccgccgccgccgccgccgcc 74968
>ref|XM_939086.1| PREDICTED: Homo sapiens hypothetical protein LOC649999 (LOC649999), mRNA Length = 2732 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 gcctccgcggccgccgcctccgcc 86 |||||||||||||||||| ||||| Sbjct: 266 gcctccgcggccgccgccgccgcc 243
>ref|XM_927710.1| PREDICTED: Homo sapiens hypothetical protein LOC644596 (LOC644596), mRNA Length = 2732 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 gcctccgcggccgccgcctccgcc 86 |||||||||||||||||| ||||| Sbjct: 266 gcctccgcggccgccgccgccgcc 243
>ref|NM_003862.1| Homo sapiens fibroblast growth factor 18 (FGF18), mRNA Length = 1546 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 59 gggcgcctccgcggccgccgcctccgcc 86 |||||||||||| ||||||||| ||||| Sbjct: 469 gggcgcctccgccgccgccgccgccgcc 442
>dbj|AB168824.1| Macaca fascicularis testis cDNA, clone: QtsA-15092, similar to human NIMA (never in mitosis gene a)- related kinase 9 (NEK9),mRNA, RefSeq: NM_033116.3 Length = 2459 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 cgccgcgccgccgccggctc 235 |||||||||||||||||||| Sbjct: 172 cgccgcgccgccgccggctc 153
>gb|AC129342.5| Rattus norvegicus BAC CH230-229B21 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 224257 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 cgccgccgccggctcctcct 240 |||||||||||||||||||| Sbjct: 161829 cgccgccgccggctcctcct 161848
>gb|BC096252.1| Homo sapiens caudal type homeo box transcription factor 1, mRNA (cDNA clone IMAGE:40005955), partial cds Length = 1302 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gggcggccggcagcggcggc 177 |||||||||||||||||||| Sbjct: 22 gggcggccggcagcggcggc 41
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cgccggctcctcctcgctcc 246 |||||||||||||||||||| Sbjct: 27545725 cgccggctcctcctcgctcc 27545706 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 cctccgcggccgccgcctccgcct 87 ||||||| |||||||||||||||| Sbjct: 24364541 cctccgccgccgccgcctccgcct 24364564 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 163 gccggcagcggcggcgcccgcgcg 186 |||| ||||||||||||||||||| Sbjct: 3604622 gccgccagcggcggcgcccgcgcg 3604599
>gb|AF342810.1|AF342810 Zea mays NOD26-like membrane integral protein ZmNIP2-3 mRNA, complete cds Length = 1300 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 59 gggcgcctccgcggccgccgcctccgcc 86 ||||| |||||||||||||||| ||||| Sbjct: 169 gggcggctccgcggccgccgccgccgcc 196
>gb|AC012314.8| Homo sapiens chromosome 19 clone CTD-3093M3, complete sequence Length = 198017 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 cctccgcggccgccgcctccgcct 87 ||||||| |||||||||||||||| Sbjct: 125701 cctccgctgccgccgcctccgcct 125678
>gb|BC093881.1| Homo sapiens NIMA (never in mitosis gene a)- related kinase 9, mRNA (cDNA clone MGC:120916 IMAGE:7939726), complete cds Length = 3046 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 cgccgcgccgccgccggctc 235 |||||||||||||||||||| Sbjct: 216 cgccgcgccgccgccggctc 197
>gb|AC009414.4| Homo sapiens BAC clone RP11-490M8 from 2, complete sequence Length = 137557 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 220 gcgccgccgccggctcctcctcgc 243 |||||||||||| ||||||||||| Sbjct: 7230 gcgccgccgccgcctcctcctcgc 7253
>gb|U51095.1|HSU51095 Human homeobox protein Cdx1 mRNA, complete cds Length = 1699 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gggcggccggcagcggcggc 177 |||||||||||||||||||| Sbjct: 24 gggcggccggcagcggcggc 43
>gb|AC135495.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1664B11, complete sequence Length = 126040 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 255 tcctccatctacgccgccggcggc 278 |||||||||| ||||||||||||| Sbjct: 19607 tcctccatctccgccgccggcggc 19630
>gb|AY080896.1| Homo sapiens NIMA-family kinase NERCC1 (NERCC1) mRNA, complete cds Length = 3244 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 cgccgcgccgccgccggctc 235 |||||||||||||||||||| Sbjct: 147 cgccgcgccgccgccggctc 128
>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence, complete sequence Length = 123406 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 gcgccgcgccgccgccggct 234 |||||||||||||||||||| Sbjct: 121709 gcgccgcgccgccgccggct 121728
>gb|AE004550.1| Pseudomonas aeruginosa PAO1, section 111 of 529 of the complete genome Length = 10840 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 cgccgccgccaagggcggccggca 169 |||||||||| ||||||||||||| Sbjct: 6395 cgccgccgccgagggcggccggca 6372
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 ctgcactgccgcgccgtcgcgcag 116 |||| ||||||||||||||||||| Sbjct: 224843 ctgcgctgccgcgccgtcgcgcag 224820
>gb|AC092037.2| Homo sapiens chromosome 3 clone RP11-89F17, complete sequence Length = 168499 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 gcctccgcggccgccgcctccgcc 86 |||||| ||||||||||||||||| Sbjct: 13202 gcctcctcggccgccgcctccgcc 13225
>dbj|AP002745.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489G09 Length = 148707 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 gcgccgcgccgccgccggct 234 |||||||||||||||||||| Sbjct: 108503 gcgccgcgccgccgccggct 108484
>dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483F08 Length = 148985 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 gcgccgcgccgccgccggct 234 |||||||||||||||||||| Sbjct: 21194 gcgccgcgccgccgccggct 21175
>gb|AF242508.1|AF242508S1 Mus musculus 2 P domain potassium channel (Kcnk3) gene, exon 1 Length = 1146 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 ggcggccggcagcggcggcg 178 |||||||||||||||||||| Sbjct: 172 ggcggccggcagcggcggcg 191
>dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0547F09 Length = 140615 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 gcgcccgcgcgacgccgccg 195 |||||||||||||||||||| Sbjct: 25591 gcgcccgcgcgacgccgccg 25572
>dbj|AP003853.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0091E23 Length = 155939 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gggcggccggcagcggcggc 177 |||||||||||||||||||| Sbjct: 97556 gggcggccggcagcggcggc 97575
>dbj|AP005449.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0427E01 Length = 146395 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cactgccgcgccgtcgcgca 115 |||||||||||||||||||| Sbjct: 45305 cactgccgcgccgtcgcgca 45286
>dbj|AP003723.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0003H08 Length = 142068 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 gcgcccgcgcgacgccgccg 195 |||||||||||||||||||| Sbjct: 134695 gcgcccgcgcgacgccgccg 134676
>dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470F10 Length = 185294 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gggcggccggcagcggcggc 177 |||||||||||||||||||| Sbjct: 28913 gggcggccggcagcggcggc 28932
>dbj|AP005197.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0592C06 Length = 160071 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 167 gcagcggcggcgcccgcgcgacgccgcc 194 |||||||||||| | ||||||||||||| Sbjct: 75485 gcagcggcggcggcggcgcgacgccgcc 75512
>gb|AF239666.1|AF239666 Homo sapiens CDX1 homeobox protein (CDX1) mRNA, complete cds Length = 942 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gggcggccggcagcggcggc 177 |||||||||||||||||||| Sbjct: 24 gggcggccggcagcggcggc 43
>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0474F11 Length = 139544 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 cgcctccgcggccgccgcctccgc 85 ||||||||||||||||||| |||| Sbjct: 51401 cgcctccgcggccgccgccgccgc 51378
>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1202_E07 Length = 145014 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 cgcctccgcggccgccgcctccgc 85 ||||||||||||||||||| |||| Sbjct: 134707 cgcctccgcggccgccgccgccgc 134684
>dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0627E03 Length = 159861 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 cgccgccgccggctcctcct 240 |||||||||||||||||||| Sbjct: 30273 cgccgccgccggctcctcct 30292
>dbj|AP005657.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0427G12 Length = 185545 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gggcggccggcagcggcggc 177 |||||||||||||||||||| Sbjct: 165395 gggcggccggcagcggcggc 165414
>dbj|AK121738.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033084N15, full insert sequence Length = 942 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 255 tcctccatctacgccgccggcggc 278 |||||||||| ||||||||||||| Sbjct: 58 tcctccatctccgccgccggcggc 35
>dbj|AK121510.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023L23, full insert sequence Length = 2960 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gcgcccgcgcgacgccgccg 195 |||||||||||||||||||| Sbjct: 2166 gcgcccgcgcgacgccgccg 2185
>dbj|AK111165.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-177-B06, full insert sequence Length = 3209 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 gcgccgcgccgccgccggct 234 |||||||||||||||||||| Sbjct: 3015 gcgccgcgccgccgccggct 3034
>gb|AF167706.1|AF167706 Homo sapiens cysteine-rich repeat-containing protein S52 precursor, mRNA, complete cds Length = 5601 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 220 gcgccgccgccggctcctcctcgc 243 |||||||||||| ||||||||||| Sbjct: 33 gcgccgccgccgcctcctcctcgc 10
>dbj|AK109524.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-F10, full insert sequence Length = 1966 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 gcgccgcgccgccgccggct 234 |||||||||||||||||||| Sbjct: 913 gcgccgcgccgccgccggct 894
>dbj|AK108273.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-C05, full insert sequence Length = 1128 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 cgccgccgccggctcctcct 240 |||||||||||||||||||| Sbjct: 281 cgccgccgccggctcctcct 300
>dbj|AK107502.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-E02, full insert sequence Length = 2691 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 167 gcagcggcggcgcccgcgcgacgccgcc 194 |||||||||||| | ||||||||||||| Sbjct: 2104 gcagcggcggcggcggcgcgacgccgcc 2077
>dbj|AK106156.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-A05, full insert sequence Length = 1411 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cgccggctcctcctcgctcc 246 |||||||||||||||||||| Sbjct: 253 cgccggctcctcctcgctcc 272
>dbj|AK106860.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-C02, full insert sequence Length = 2729 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 221 cgccgccgccggctcctcctcgctcccc 248 ||||||||||| ||||||||| |||||| Sbjct: 67 cgccgccgccgcctcctcctccctcccc 94
>emb|AJ337788.1|HSA337788 Homo sapiens genomic sequence surrounding NotI site, clone NL1-FL14C Length = 676 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 gcctccgcggccgccgcctccgcc 86 |||||| ||||||||||||||||| Sbjct: 477 gcctcctcggccgccgcctccgcc 454
>dbj|AK105244.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-F08, full insert sequence Length = 1483 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 218 ccgcgccgccgccggctcctcctc 241 |||||||||||||| ||||||||| Sbjct: 942 ccgcgccgccgccgtctcctcctc 919
>dbj|AK104323.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-G08, full insert sequence Length = 1916 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 cgcggccgccgcctccgcct 87 |||||||||||||||||||| Sbjct: 96 cgcggccgccgcctccgcct 77
>dbj|AK102007.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033079N23, full insert sequence Length = 2983 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 gccgccgcctccgcctacta 91 |||||||||||||||||||| Sbjct: 155 gccgccgcctccgcctacta 174
>gb|AY741535.1| Digitaria sanguinalis TEL1 gene, partial sequence Length = 2942 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 220 gcgccgccgccggctcctcctcgc 243 |||||||||||| ||||||||||| Sbjct: 1369 gcgccgccgccgcctcctcctcgc 1346
>emb|AJ329074.1|HSA329074 Homo sapiens genomic sequence surrounding NotI site, clone NL1-AP15R Length = 669 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 cgccgcgccgccgccggctc 235 |||||||||||||||||||| Sbjct: 147 cgccgcgccgccgccggctc 128
>dbj|AK072432.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023098A15, full insert sequence Length = 3872 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 cgccgccgccggctcctcct 240 |||||||||||||||||||| Sbjct: 414 cgccgccgccggctcctcct 395
>gb|BC112101.1| Homo sapiens NIMA (never in mitosis gene a)- related kinase 9, mRNA (cDNA clone MGC:138306 IMAGE:8327569), complete cds Length = 3056 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 cgccgcgccgccgccggctc 235 |||||||||||||||||||| Sbjct: 216 cgccgcgccgccgccggctc 197
>gb|BC111989.1| Homo sapiens cysteine rich transmembrane BMP regulator 1 (chordin-like), mRNA (cDNA clone MGC:138194 IMAGE:8327457), complete cds Length = 3187 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 220 gcgccgccgccggctcctcctcgc 243 |||||||||||| ||||||||||| Sbjct: 31 gcgccgccgccgcctcctcctcgc 8
>dbj|AK070388.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054G02, full insert sequence Length = 2179 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 cgcggccgccgcctccgcct 87 |||||||||||||||||||| Sbjct: 140 cgcggccgccgcctccgcct 121
>emb|AL691403.2|CNS07YOR Human chromosome 14 DNA sequence BAC C-3075F15 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 181848 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 cgccgcgccgccgccggctc 235 |||||||||||||||||||| Sbjct: 158952 cgccgcgccgccgccggctc 158933
>dbj|AK067708.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118H02, full insert sequence Length = 2031 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 62 cgcctccgcggccgccgcctccgc 85 ||||||||||||||||||| |||| Sbjct: 242 cgcctccgcggccgccgccgccgc 265
>dbj|AK067627.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013113I18, full insert sequence Length = 2169 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 cgcggccgccgcctccgcct 87 |||||||||||||||||||| Sbjct: 136 cgcggccgccgcctccgcct 117
>dbj|AK064333.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-G05, full insert sequence Length = 2968 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 gccgccgcctccgcctacta 91 |||||||||||||||||||| Sbjct: 137 gccgccgcctccgcctacta 156
>gb|AC121091.10| Mus musculus chromosome 1, clone RP24-191N24, complete sequence Length = 150109 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 ccgcggccgccgcctccgcc 86 |||||||||||||||||||| Sbjct: 73880 ccgcggccgccgcctccgcc 73899
>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0034A04 Length = 151263 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 gccgccgcctccgcctacta 91 |||||||||||||||||||| Sbjct: 114881 gccgccgcctccgcctacta 114900
>gb|AC007055.3|AC007055 Homo sapiens chromosome 14 clone BAC 201F1 map 14q24.3, complete sequence Length = 199927 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 cgccgcgccgccgccggctc 235 |||||||||||||||||||| Sbjct: 91890 cgccgcgccgccgccggctc 91909
>emb|AL049780.4|CNS00007 Human chromosome 14 DNA sequence BAC R-950C14 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 195891 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 cgccgcgccgccgccggctc 235 |||||||||||||||||||| Sbjct: 34967 cgccgcgccgccgccggctc 34948
>gb|BC096251.1| Homo sapiens caudal type homeobox transcription factor 1, mRNA (cDNA clone IMAGE:40005954), complete cds Length = 1256 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gggcggccggcagcggcggc 177 |||||||||||||||||||| Sbjct: 22 gggcggccggcagcggcggc 41
>gb|AC105298.21| Mus musculus strain C57BL/6J chromosome 5 clone rp23-224j9, complete sequence Length = 258789 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 ggcggccggcagcggcggcg 178 |||||||||||||||||||| Sbjct: 144932 ggcggccggcagcggcggcg 144913
>ref|NM_001804.1| Homo sapiens caudal type homeobox transcription factor 1 (CDX1), mRNA Length = 1699 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gggcggccggcagcggcggc 177 |||||||||||||||||||| Sbjct: 24 gggcggccggcagcggcggc 43
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 gcgcctccgcggccgccgcctccg 84 ||||| |||||||||||||||||| Sbjct: 2849038 gcgccgccgcggccgccgcctccg 2849061
>gb|AC005895.1|AC005895 Homo sapiens chromosome 5, Bac clone 5m9 (LBNL H220), complete sequence Length = 87857 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gggcggccggcagcggcggc 177 |||||||||||||||||||| Sbjct: 35219 gggcggccggcagcggcggc 35238
>gb|AF075292.1|AF075292 Homo sapiens fibroblast growth factor 18 (FGF18) mRNA, complete cds Length = 1546 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 59 gggcgcctccgcggccgccgcctccgcc 86 |||||||||||| ||||||||| ||||| Sbjct: 469 gggcgcctccgccgccgccgccgccgcc 442
>gb|AF075291.1|AF075291 Mus musculus fibroblast growth factor 18 (Fgf18) mRNA, complete cds Length = 1094 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 59 gggcgcctccgcggccgccgcctccgcc 86 |||||||||||| ||||||||| ||||| Sbjct: 66 gggcgcctccgccgccgccgccgccgcc 39
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 gccgcgccgtcgcgcagctc 119 |||||||||||||||||||| Sbjct: 3294008 gccgcgccgtcgcgcagctc 3294027
>gb|AY648055.1| Rubrivivax gelatinosus CoxB (coxB) gene, partial cds; CoxA (coxA), Cox11 (cox11), CoxC (coxC), SurF1 (surF1), Sco1 (sco1), and HemJ (hemJ) genes, complete cds; and HemI gene, partial cds Length = 7716 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 gcggccggcagcggcggcgc 179 |||||||||||||||||||| Sbjct: 5140 gcggccggcagcggcggcgc 5121
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 4.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 60 ggcgcctccgcggccgccgcctccgcct 87 ||||||||| ||||| |||||||||||| Sbjct: 134686 ggcgcctcctcggcccccgcctccgcct 134659
>ref|NM_033116.3| Homo sapiens NIMA (never in mitosis gene a)- related kinase 9 (NEK9), mRNA Length = 3244 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 cgccgcgccgccgccggctc 235 |||||||||||||||||||| Sbjct: 147 cgccgcgccgccgccggctc 128
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 cgccgccggcggcgtcgcca 285 |||||||||||||||||||| Sbjct: 42289 cgccgccggcggcgtcgcca 42308
>dbj|AB209139.1| Homo sapiens mRNA for cysteine-rich motor neuron 1 variant protein Length = 3253 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 220 gcgccgccgccggctcctcctcgc 243 |||||||||||| ||||||||||| Sbjct: 60 gcgccgccgccgcctcctcctcgc 37
>gb|U16360.1|HSU16360 Human caudal-type homeobox protein (CDX1) gene, partial cds Length = 613 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 gggcggccggcagcggcggc 177 |||||||||||||||||||| Sbjct: 111 gggcggccggcagcggcggc 130
>gb|U02098.1|MMU02098 Mus musculus Pur-alpha mRNA, complete cds Length = 1609 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cgcggccgccgcctccgcct 87 |||||||||||||||||||| Sbjct: 133 cgcggccgccgcctccgcct 152
>emb|AL133647.1|HSM801420 Homo sapiens mRNA; cDNA DKFZp434L061 (from clone DKFZp434L061); partial cds Length = 2787 Score = 40.1 bits (20), Expect = 4.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 cctccgcggccgccgcctccgcct 87 ||||||| |||||||||||||||| Sbjct: 1025 cctccgctgccgccgcctccgcct 1002
>gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1217B09, complete sequence Length = 148894 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 cgccgccgccggctcctcct 240 |||||||||||||||||||| Sbjct: 117721 cgccgccgccggctcctcct 117740
>dbj|AB082526.1| Homo sapiens mRNA for KIAA1995 protein Length = 5492 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 cgccgcgccgccgccggctc 235 |||||||||||||||||||| Sbjct: 241 cgccgcgccgccgccggctc 222 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,485,521 Number of Sequences: 3902068 Number of extensions: 3485521 Number of successful extensions: 139310 Number of sequences better than 10.0: 248 Number of HSP's better than 10.0 without gapping: 273 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 125684 Number of HSP's gapped (non-prelim): 13618 length of query: 304 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 282 effective length of database: 17,147,199,772 effective search space: 4835510335704 effective search space used: 4835510335704 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
