ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl45a03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 78 2e-11
2gb|AF461424.2| Oryza sativa chromosome 3 clone OSJNBa0016B07, co... 78 2e-11
3dbj|AB109892.1| Oryza sativa (japonica cultivar-group) PHYB mRNA... 78 2e-11
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 78 2e-11
5dbj|AB183525.1| Oryza sativa (japonica cultivar-group) PhyB gene... 78 2e-11
6gb|AC137071.3| Genomic sequence for Oryza sativa, Nipponbare str... 78 2e-11
7emb|X57563.2|OSPHYB1GE O.sativa DNA for phyB1 gene 74 4e-10
8gb|AY234827.1| Zea mays cultivar B73 phytochrome B1 apoprotein (... 70 6e-09
9gb|AY466100.1| Sorghum propinquum phytochrome B (PHYB) gene, com... 62 1e-06
10gb|AY466099.1| Sorghum x drummondii voucher PI302233 phytochrome... 62 1e-06
11gb|AY466098.1| Sorghum arundinaceum voucher PI302233 phytochrome... 62 1e-06
12gb|AY466097.1| Sorghum arundinaceum voucher PI225905 phytochrome... 62 1e-06
13gb|AY466096.1| Sorghum arundinaceum voucher IS14485 phytochrome ... 62 1e-06
14gb|AY466095.1| Sorghum arundinaceum voucher PI302105 phytochrome... 62 1e-06
15gb|AY466094.1| Sorghum arundinaceum voucher IS14567 phytochrome ... 62 1e-06
16gb|AY466093.1| Sorghum arundinaceum voucher IS14503 phytochrome ... 62 1e-06
17gb|AY466092.1| Sorghum arundinaceum voucher PI213900 phytochrome... 62 1e-06
18gb|AY466091.1| Sorghum arundinaceum voucher IS14569 phytochrome ... 62 1e-06
19gb|AY466090.1| Sorghum bicolor phytochrome B (PHYB) gene, comple... 62 1e-06
20gb|AY466089.1| Sorghum bicolor isolate PHYB-Rtx430 phytochrome B... 62 1e-06
21gb|AY466088.1| Sorghum bicolor voucher NSL83707 phytochrome B (P... 62 1e-06
22gb|AY466087.1| Sorghum bicolor voucher PI152593 phytochrome B (P... 62 1e-06
23gb|AY466086.1| Sorghum bicolor voucher PI229835 phytochrome B (P... 62 1e-06
24gb|AY466085.1| Sorghum bicolor voucher PI153800 phytochrome B (P... 62 1e-06
25gb|AY466084.1| Sorghum bicolor voucher PI267380 phytochrome B (P... 62 1e-06
26gb|AF182394.1|AF182394 Sorghum bicolor phytochrome B (PHYB) gene... 62 1e-06
27gb|AY623109.1| Homo sapiens TAF1 RNA polymerase II, TATA box bin... 44 0.33
28emb|AL590762.1|HSXDPA Homo sapiens chromosome X sequence from 6... 44 0.33
29gb|AC163346.3| Mus musculus BAC clone RP23-370A2 from chromosome... 42 1.3
30gb|DQ450278.1| Drosophila melanogaster isolate tu1402102317 lim ... 42 1.3
31gb|DQ450277.1| Drosophila melanogaster isolate tu1402102316 lim ... 42 1.3
32gb|DQ450276.1| Drosophila melanogaster isolate tu1402102314 lim ... 42 1.3
33gb|DQ450274.1| Drosophila melanogaster isolate tu1402102310 lim ... 42 1.3
34gb|DQ450273.1| Drosophila melanogaster isolate bl3886 lim kinase... 42 1.3
35gb|DQ450272.1| Drosophila melanogaster isolate bl3875 lim kinase... 42 1.3
36gb|DQ450271.1| Drosophila melanogaster isolate bl3870 lim kinase... 42 1.3
37gb|DQ450269.1| Drosophila melanogaster isolate bl3853 lim kinase... 42 1.3
38gb|DQ450268.1| Drosophila melanogaster isolate bl3852 lim kinase... 42 1.3
39gb|DQ450267.1| Drosophila melanogaster isolate bl3846 lim kinase... 42 1.3
40gb|DQ450266.1| Drosophila melanogaster isolate bl3844 lim kinase... 42 1.3
41gb|DQ450265.1| Drosophila melanogaster isolate bl3841 lim kinase... 42 1.3
42gb|DQ450264.1| Drosophila melanogaster isolate bl3839 lim kinase... 42 1.3
43gb|DQ450263.1| Drosophila melanogaster isolate bl1 lim kinase (L... 42 1.3
44emb|AL731639.3|OSJN00288 Oryza sativa genomic DNA, chromosome 4,... 42 1.3
45gb|AC105008.5| Homo sapiens chromosome 8, clone CTD-2589E21, com... 42 1.3
46gb|AC023748.4| Drosophila melanogaster X BAC RP98-36F8 (Roswell ... 42 1.3
47gb|AC104371.4| Homo sapiens chromosome 8, clone RP11-383N10, com... 42 1.3
48gb|DQ080039.1| Gluconacetobacter diazotrophicus PAL5 ABC-type Fe... 42 1.3
49gb|CP000264.1| Jannaschia sp. CCS1, complete genome 42 1.3
50gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 42 1.3
51dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
52dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
53gb|AC126690.5| Mus musculus BAC clone RP23-189K24 from chromosom... 42 1.3
54ref|XM_575607.1| PREDICTED: Rattus norvegicus similar to cDNA se... 42 1.3
55gb|AC023724.5| Drosophila melanogaster X BAC RP98-14B2 (Roswell ... 42 1.3
56gb|AE003445.2| Drosophila melanogaster chromosome X, section 29 ... 42 1.3
57gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
58emb|BX000509.2|CNS08CDZ Oryza sativa chromosome 12, . BAC OJ1085... 42 1.3
59emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003... 42 1.3
60gb|AC134236.4| Oryza sativa (japonica cultivar-group) chromosome... 40 5.1
61ref|XM_522717.1| PREDICTED: Pan troglodytes similar to 60S ribos... 40 5.1
62ref|NM_015336.1| Homo sapiens zinc finger, DHHC-type containing ... 40 5.1
63gb|AC104270.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.1
64gb|AY753025.1| Penaeus monodon clone t516 microsatellite sequence 40 5.1
65gb|AC130598.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.1
66ref|XM_426714.1| PREDICTED: Gallus gallus similar to homolog of ... 40 5.1
67gb|AC149132.1| Pan troglodytes chromosome X clone PTB-099J01 map... 40 5.1
68gb|AC118138.2| Homo sapiens BAC clone RP11-451K15 from 7, comple... 40 5.1
69emb|BX901930.17| Zebrafish DNA sequence from clone RP71-15D4 in ... 40 5.1
70emb|AL807772.12| Human DNA sequence from clone RP11-188G3 on chr... 40 5.1
71ref|XM_504747.1| Yarrowia lipolytica CLIB122, YALI0E33825g predi... 40 5.1
72gb|AC099533.36| Pan troglodytes clone rp43-41g5, complete sequence 40 5.1
73emb|AL136159.11| Human DNA sequence from clone RP11-165M6 on chr... 40 5.1
74emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete ... 40 5.1
75emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete ... 40 5.1
76emb|BX640434.1| Bordetella parapertussis strain 12822, complete ... 40 5.1
77emb|BX640420.1| Bordetella pertussis strain Tohama I, complete g... 40 5.1
78emb|AL662987.3|OSJN00188 Oryza sativa genomic DNA, chromosome 4,... 40 5.1
79gb|AC093014.11| Homo sapiens 12 BAC RP11-734E19 (Roswell Park Ca... 40 5.1
80dbj|AK124543.1| Homo sapiens cDNA FLJ42552 fis, clone BRACE3005217 40 5.1
81gb|AC148301.3| Pan troglodytes BAC clone CH251-69O15 from chromo... 40 5.1
82ref|XM_937876.1| PREDICTED: Homo sapiens similar to 60S ribosoma... 40 5.1
83ref|XM_296315.3| PREDICTED: Homo sapiens similar to 60S ribosoma... 40 5.1
84gb|AC012331.9| Homo sapiens chromosome 22 clone b41c4 map 22q11,... 40 5.1
85gb|AC004166.12| Homo sapiens Chromosome 7 BAC Clone 239c10, comp... 40 5.1
86gb|AC002308.1| Homo sapiens Chromosome 22q11.2 BAC Clone 1000e4 ... 40 5.1
87dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
88dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
89dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
90dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
91dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
92dbj|AP003205.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
93dbj|AP005256.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
94dbj|AP003621.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
95dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
96dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
97dbj|AP005419.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
98dbj|AK100716.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.1
99dbj|AB024494.1| Homo sapiens HIP3 mRNA for huntingtin interactin... 40 5.1
100ref|NG_000002.1| Homo sapiens immunoglobulin lambda locus (IGL@)... 40 5.1
101emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 40 5.1
102gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.1
103dbj|D86994.1| Homo sapiens immunoglobulin lambda gene locus DNA,... 40 5.1
104dbj|D87015.2| Homo sapiens immunoglobulin lambda gene locus DNA,... 40 5.1 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 74/86 (86%), Gaps = 6/86 (6%)
 Strand = Plus / Plus

                                                                            
Query: 277      ccaccgcaccgtcgccatggcctcaggaagccgcgccacgcccacgcccacgcgctcccc 336
                |||||||| || |||||||||||| || ||||||||||||||||      ||||||||||
Sbjct: 10993441 ccaccgcatcggcgccatggcctcgggtagccgcgccacgccca------cgcgctcccc 10993494

                                          
Query: 337      ctcctccgcgcggccctctgcgccgc 362
                |||||||||||||||| | |||||||
Sbjct: 10993495 ctcctccgcgcggcccgcggcgccgc 10993520



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 310     cgccacgcccacgcccacgc 329
               ||||||||||||||||||||
Sbjct: 4687127 cgccacgcccacgcccacgc 4687108



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 310    cgccacgcccacgcccacgc 329
              ||||||||||||||||||||
Sbjct: 901411 cgccacgcccacgcccacgc 901430
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>gb|AF461424.2| Oryza sativa chromosome 3 clone OSJNBa0016B07, complete sequence
          Length = 167588

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 74/86 (86%), Gaps = 6/86 (6%)
 Strand = Plus / Minus

                                                                          
Query: 277    ccaccgcaccgtcgccatggcctcaggaagccgcgccacgcccacgcccacgcgctcccc 336
              |||||||| || |||||||||||| || |||||||||||||||||||      |||||||
Sbjct: 139681 ccaccgcatcggcgccatggcctcgggtagccgcgccacgcccacgc------gctcccc 139628

                                        
Query: 337    ctcctccgcgcggccctctgcgccgc 362
              |||||||||||||||| | |||||||
Sbjct: 139627 ctcctccgcgcggcccgcggcgccgc 139602
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>dbj|AB109892.1| Oryza sativa (japonica cultivar-group) PHYB mRNA for phytochrome B,
           complete cds
          Length = 4223

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 74/86 (86%), Gaps = 6/86 (6%)
 Strand = Plus / Plus

                                                                       
Query: 277 ccaccgcaccgtcgccatggcctcaggaagccgcgccacgcccacgcccacgcgctcccc 336
           |||||||| || |||||||||||| || |||||||||||||||      |||||||||||
Sbjct: 186 ccaccgcatcggcgccatggcctcgggtagccgcgccacgccc------acgcgctcccc 239

                                     
Query: 337 ctcctccgcgcggccctctgcgccgc 362
           |||||||||||||||| | |||||||
Sbjct: 240 ctcctccgcgcggcccgcggcgccgc 265
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 74/86 (86%), Gaps = 6/86 (6%)
 Strand = Plus / Plus

                                                                            
Query: 277      ccaccgcaccgtcgccatggcctcaggaagccgcgccacgcccacgcccacgcgctcccc 336
                |||||||| || |||||||||||| || |||||||||||||||||      |||||||||
Sbjct: 10990204 ccaccgcatcggcgccatggcctcgggtagccgcgccacgcccac------gcgctcccc 10990257

                                          
Query: 337      ctcctccgcgcggccctctgcgccgc 362
                |||||||||||||||| | |||||||
Sbjct: 10990258 ctcctccgcgcggcccgcggcgccgc 10990283



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 310     cgccacgcccacgcccacgc 329
               ||||||||||||||||||||
Sbjct: 4687242 cgccacgcccacgcccacgc 4687223



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 310    cgccacgcccacgcccacgc 329
              ||||||||||||||||||||
Sbjct: 901409 cgccacgcccacgcccacgc 901428
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>dbj|AB183525.1| Oryza sativa (japonica cultivar-group) PhyB gene for phytochrome B,
           complete cds
          Length = 8636

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 74/86 (86%), Gaps = 6/86 (6%)
 Strand = Plus / Plus

                                                                       
Query: 277 ccaccgcaccgtcgccatggcctcaggaagccgcgccacgcccacgcccacgcgctcccc 336
           |||||||| || |||||||||||| || |||||||||||||||||      |||||||||
Sbjct: 640 ccaccgcatcggcgccatggcctcgggtagccgcgccacgcccac------gcgctcccc 693

                                     
Query: 337 ctcctccgcgcggccctctgcgccgc 362
           |||||||||||||||| | |||||||
Sbjct: 694 ctcctccgcgcggcccgcggcgccgc 719
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>gb|AC137071.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0042B10, from chromosome 3, complete sequence
          Length = 144205

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 74/86 (86%), Gaps = 6/86 (6%)
 Strand = Plus / Plus

                                                                         
Query: 277   ccaccgcaccgtcgccatggcctcaggaagccgcgccacgcccacgcccacgcgctcccc 336
             |||||||| || |||||||||||| || |||||||||||||||      |||||||||||
Sbjct: 36926 ccaccgcatcggcgccatggcctcgggtagccgcgccacgccc------acgcgctcccc 36979

                                       
Query: 337   ctcctccgcgcggccctctgcgccgc 362
             |||||||||||||||| | |||||||
Sbjct: 36980 ctcctccgcgcggcccgcggcgccgc 37005
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>emb|X57563.2|OSPHYB1GE O.sativa DNA for phyB1 gene
          Length = 4095

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 43/45 (95%)
 Strand = Plus / Plus

                                                        
Query: 318 ccacgcccacgcgctccccctcctccgcgcggccctctgcgccgc 362
           ||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 86  ccacgcccacgcgctccccctcctccgcgcggcccgcggcgccgc 130
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>gb|AY234827.1| Zea mays cultivar B73 phytochrome B1 apoprotein (phyB1) gene,
            complete cds; and Ty3/gypsy-like retrotransposon,
            complete sequence
          Length = 13645

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 35/35 (100%)
 Strand = Plus / Plus

                                               
Query: 318  ccacgcccacgcgctccccctcctccgcgcggccc 352
            |||||||||||||||||||||||||||||||||||
Sbjct: 1577 ccacgcccacgcgctccccctcctccgcgcggccc 1611
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>gb|AY466100.1| Sorghum propinquum phytochrome B (PHYB) gene, complete cds
          Length = 7269

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 318 ccacgcccacgcgctccccctcctccgcgcg 348
           |||||||||||||||||||||||||||||||
Sbjct: 20  ccacgcccacgcgctccccctcctccgcgcg 50
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>gb|AY466099.1| Sorghum x drummondii voucher PI302233 phytochrome B (PHYB) gene,
           complete cds
          Length = 7271

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 318 ccacgcccacgcgctccccctcctccgcgcg 348
           |||||||||||||||||||||||||||||||
Sbjct: 20  ccacgcccacgcgctccccctcctccgcgcg 50
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>gb|AY466098.1| Sorghum arundinaceum voucher PI302233 phytochrome B (PHYB) gene,
           complete cds
          Length = 7242

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 318 ccacgcccacgcgctccccctcctccgcgcg 348
           |||||||||||||||||||||||||||||||
Sbjct: 20  ccacgcccacgcgctccccctcctccgcgcg 50
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>gb|AY466097.1| Sorghum arundinaceum voucher PI225905 phytochrome B (PHYB) gene,
           complete cds
          Length = 7285

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 318 ccacgcccacgcgctccccctcctccgcgcg 348
           |||||||||||||||||||||||||||||||
Sbjct: 20  ccacgcccacgcgctccccctcctccgcgcg 50
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>gb|AY466096.1| Sorghum arundinaceum voucher IS14485 phytochrome B (PHYB) gene,
           complete cds
          Length = 7284

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 318 ccacgcccacgcgctccccctcctccgcgcg 348
           |||||||||||||||||||||||||||||||
Sbjct: 20  ccacgcccacgcgctccccctcctccgcgcg 50
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>gb|AY466095.1| Sorghum arundinaceum voucher PI302105 phytochrome B (PHYB) gene,
           complete cds
          Length = 7284

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 318 ccacgcccacgcgctccccctcctccgcgcg 348
           |||||||||||||||||||||||||||||||
Sbjct: 20  ccacgcccacgcgctccccctcctccgcgcg 50
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>gb|AY466094.1| Sorghum arundinaceum voucher IS14567 phytochrome B (PHYB) gene,
           complete cds
          Length = 7284

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 318 ccacgcccacgcgctccccctcctccgcgcg 348
           |||||||||||||||||||||||||||||||
Sbjct: 20  ccacgcccacgcgctccccctcctccgcgcg 50
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>gb|AY466093.1| Sorghum arundinaceum voucher IS14503 phytochrome B (PHYB) gene,
           complete cds
          Length = 7283

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 318 ccacgcccacgcgctccccctcctccgcgcg 348
           |||||||||||||||||||||||||||||||
Sbjct: 20  ccacgcccacgcgctccccctcctccgcgcg 50
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>gb|AY466092.1| Sorghum arundinaceum voucher PI213900 phytochrome B (PHYB) gene,
           complete cds
          Length = 7283

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 318 ccacgcccacgcgctccccctcctccgcgcg 348
           |||||||||||||||||||||||||||||||
Sbjct: 20  ccacgcccacgcgctccccctcctccgcgcg 50
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>gb|AY466091.1| Sorghum arundinaceum voucher IS14569 phytochrome B (PHYB) gene,
           complete cds
          Length = 7283

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 318 ccacgcccacgcgctccccctcctccgcgcg 348
           |||||||||||||||||||||||||||||||
Sbjct: 20  ccacgcccacgcgctccccctcctccgcgcg 50
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>gb|AY466090.1| Sorghum bicolor phytochrome B (PHYB) gene, complete cds
          Length = 7285

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 318 ccacgcccacgcgctccccctcctccgcgcg 348
           |||||||||||||||||||||||||||||||
Sbjct: 20  ccacgcccacgcgctccccctcctccgcgcg 50
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>gb|AY466089.1| Sorghum bicolor isolate PHYB-Rtx430 phytochrome B (PHYB) gene,
           complete cds
          Length = 7285

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 318 ccacgcccacgcgctccccctcctccgcgcg 348
           |||||||||||||||||||||||||||||||
Sbjct: 20  ccacgcccacgcgctccccctcctccgcgcg 50
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>gb|AY466088.1| Sorghum bicolor voucher NSL83707 phytochrome B (PHYB) gene,
           complete cds
          Length = 7285

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 318 ccacgcccacgcgctccccctcctccgcgcg 348
           |||||||||||||||||||||||||||||||
Sbjct: 20  ccacgcccacgcgctccccctcctccgcgcg 50
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>gb|AY466087.1| Sorghum bicolor voucher PI152593 phytochrome B (PHYB) gene,
           complete cds
          Length = 7285

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 318 ccacgcccacgcgctccccctcctccgcgcg 348
           |||||||||||||||||||||||||||||||
Sbjct: 20  ccacgcccacgcgctccccctcctccgcgcg 50
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>gb|AY466086.1| Sorghum bicolor voucher PI229835 phytochrome B (PHYB) gene,
           complete cds
          Length = 7285

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 318 ccacgcccacgcgctccccctcctccgcgcg 348
           |||||||||||||||||||||||||||||||
Sbjct: 20  ccacgcccacgcgctccccctcctccgcgcg 50
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>gb|AY466085.1| Sorghum bicolor voucher PI153800 phytochrome B (PHYB) gene,
           complete cds
          Length = 7285

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 318 ccacgcccacgcgctccccctcctccgcgcg 348
           |||||||||||||||||||||||||||||||
Sbjct: 20  ccacgcccacgcgctccccctcctccgcgcg 50
to top
>gb|AY466084.1| Sorghum bicolor voucher PI267380 phytochrome B (PHYB) gene,
           complete cds
          Length = 7284

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 318 ccacgcccacgcgctccccctcctccgcgcg 348
           |||||||||||||||||||||||||||||||
Sbjct: 20  ccacgcccacgcgctccccctcctccgcgcg 50
to top
>gb|AF182394.1|AF182394 Sorghum bicolor phytochrome B (PHYB) gene, complete cds
          Length = 8786

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 318 ccacgcccacgcgctccccctcctccgcgcg 348
           |||||||||||||||||||||||||||||||
Sbjct: 448 ccacgcccacgcgctccccctcctccgcgcg 478
to top
>gb|AY623109.1| Homo sapiens TAF1 RNA polymerase II, TATA box binding protein
             (TBP)-associated factor, 250kDa (TAF1) gene, complete cds
          Length = 100711

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 39    ccctgaccctgaggcctgaccgcctg 64
             ||||||||| ||||||||||||||||
Sbjct: 56675 ccctgacccggaggcctgaccgcctg 56700
to top
>emb|AL590762.1|HSXDPA Homo sapiens chromosome X  sequence from 6 PACs 1 BAC and 1 cosmid,
              region GJB1-DXS559 map Xq13.1; segment 1/2, complete
              sequence
          Length = 305000

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 39     ccctgaccctgaggcctgaccgcctg 64
              ||||||||| ||||||||||||||||
Sbjct: 262510 ccctgacccggaggcctgaccgcctg 262535
to top
>gb|AC163346.3| Mus musculus BAC clone RP23-370A2 from chromosome 6, complete sequence
          Length = 173936

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 308    cgcgccacgcccacgcccacg 328
              |||||||||||||||||||||
Sbjct: 131971 cgcgccacgcccacgcccacg 131951
to top
>gb|DQ450278.1| Drosophila melanogaster isolate tu1402102317 lim kinase (Lim1)
           gene, intron 1
          Length = 946

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 309 gcgccacgcccacgcccacgc 329
           |||||||||||||||||||||
Sbjct: 271 gcgccacgcccacgcccacgc 251
to top
>gb|DQ450277.1| Drosophila melanogaster isolate tu1402102316 lim kinase (Lim1)
           gene, intron 1
          Length = 947

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 309 gcgccacgcccacgcccacgc 329
           |||||||||||||||||||||
Sbjct: 272 gcgccacgcccacgcccacgc 252
to top
>gb|DQ450276.1| Drosophila melanogaster isolate tu1402102314 lim kinase (Lim1)
           gene, intron 1
          Length = 947

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 309 gcgccacgcccacgcccacgc 329
           |||||||||||||||||||||
Sbjct: 272 gcgccacgcccacgcccacgc 252
to top
>gb|DQ450274.1| Drosophila melanogaster isolate tu1402102310 lim kinase (Lim1)
           gene, intron 1
          Length = 953

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 309 gcgccacgcccacgcccacgc 329
           |||||||||||||||||||||
Sbjct: 272 gcgccacgcccacgcccacgc 252
to top
>gb|DQ450273.1| Drosophila melanogaster isolate bl3886 lim kinase (Lim1) gene,
           intron 1
          Length = 952

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 309 gcgccacgcccacgcccacgc 329
           |||||||||||||||||||||
Sbjct: 271 gcgccacgcccacgcccacgc 251
to top
>gb|DQ450272.1| Drosophila melanogaster isolate bl3875 lim kinase (Lim1) gene,
           intron 1
          Length = 947

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 309 gcgccacgcccacgcccacgc 329
           |||||||||||||||||||||
Sbjct: 272 gcgccacgcccacgcccacgc 252
to top
>gb|DQ450271.1| Drosophila melanogaster isolate bl3870 lim kinase (Lim1) gene,
           intron 1
          Length = 959

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 309 gcgccacgcccacgcccacgc 329
           |||||||||||||||||||||
Sbjct: 278 gcgccacgcccacgcccacgc 258
to top
>gb|DQ450269.1| Drosophila melanogaster isolate bl3853 lim kinase (Lim1) gene,
           intron 1
          Length = 945

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 309 gcgccacgcccacgcccacgc 329
           |||||||||||||||||||||
Sbjct: 270 gcgccacgcccacgcccacgc 250
to top
>gb|DQ450268.1| Drosophila melanogaster isolate bl3852 lim kinase (Lim1) gene,
           intron 1
          Length = 947

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 309 gcgccacgcccacgcccacgc 329
           |||||||||||||||||||||
Sbjct: 272 gcgccacgcccacgcccacgc 252
to top
>gb|DQ450267.1| Drosophila melanogaster isolate bl3846 lim kinase (Lim1) gene,
           intron 1
          Length = 953

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 309 gcgccacgcccacgcccacgc 329
           |||||||||||||||||||||
Sbjct: 272 gcgccacgcccacgcccacgc 252
to top
>gb|DQ450266.1| Drosophila melanogaster isolate bl3844 lim kinase (Lim1) gene,
           intron 1
          Length = 959

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 309 gcgccacgcccacgcccacgc 329
           |||||||||||||||||||||
Sbjct: 278 gcgccacgcccacgcccacgc 258
to top
>gb|DQ450265.1| Drosophila melanogaster isolate bl3841 lim kinase (Lim1) gene,
           intron 1
          Length = 953

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 309 gcgccacgcccacgcccacgc 329
           |||||||||||||||||||||
Sbjct: 272 gcgccacgcccacgcccacgc 252
to top
>gb|DQ450264.1| Drosophila melanogaster isolate bl3839 lim kinase (Lim1) gene,
           intron 1
          Length = 947

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 309 gcgccacgcccacgcccacgc 329
           |||||||||||||||||||||
Sbjct: 272 gcgccacgcccacgcccacgc 252
to top
>gb|DQ450263.1| Drosophila melanogaster isolate bl1 lim kinase (Lim1) gene, intron
           1
          Length = 947

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 309 gcgccacgcccacgcccacgc 329
           |||||||||||||||||||||
Sbjct: 272 gcgccacgcccacgcccacgc 252
to top
>emb|AL731639.3|OSJN00288 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000315_02,
             complete sequence
          Length = 112404

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 311   gccacgcccacgcccacgcgc 331
             |||||||||||||||||||||
Sbjct: 72633 gccacgcccacgcccacgcgc 72613
to top
>gb|AC105008.5| Homo sapiens chromosome 8, clone CTD-2589E21, complete sequence
          Length = 172661

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 148   gctcccatccttttatcctct 168
             |||||||||||||||||||||
Sbjct: 71682 gctcccatccttttatcctct 71662
to top
>gb|AC023748.4| Drosophila melanogaster X BAC RP98-36F8 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 156096

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 309    gcgccacgcccacgcccacgc 329
              |||||||||||||||||||||
Sbjct: 104124 gcgccacgcccacgcccacgc 104144
to top
>gb|AC104371.4| Homo sapiens chromosome 8, clone RP11-383N10, complete sequence
          Length = 170106

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 148    gctcccatccttttatcctct 168
              |||||||||||||||||||||
Sbjct: 164621 gctcccatccttttatcctct 164601
to top
>gb|DQ080039.1| Gluconacetobacter diazotrophicus PAL5 ABC-type Fe3+ transport system
            periplasmic protein component (feuA), ABC-type Fe3+
            transport system permease component (feuB), and ABC-type
            Fe3+ transport system ATP-binding component (feuC) genes,
            complete cds
          Length = 2852

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 305  agccgcgccacgcccacgccc 325
            |||||||||||||||||||||
Sbjct: 1535 agccgcgccacgcccacgccc 1515
to top
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 334     cccctcctccgcgcggccctc 354
               |||||||||||||||||||||
Sbjct: 3004995 cccctcctccgcgcggccctc 3005015
to top
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 310     cgccacgcccacgcccacgcgctcc 334
               ||||| |||||||||||||||||||
Sbjct: 2595288 cgccatgcccacgcccacgcgctcc 2595264
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 311      gccacgcccacgcccacgcgc 331
                |||||||||||||||||||||
Sbjct: 20102729 gccacgcccacgcccacgcgc 20102709



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 312      ccacgcccacgcccacgcgc 331
                ||||||||||||||||||||
Sbjct: 29374833 ccacgcccacgcccacgcgc 29374814
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 305     agccgcgccacgcccacgcccacgc 329
               |||| ||||||||||||||||||||
Sbjct: 1280354 agccacgccacgcccacgcccacgc 1280330
to top
>gb|AC126690.5| Mus musculus BAC clone RP23-189K24 from chromosome 14, complete sequence
          Length = 212894

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 183    gaagcaatgtctccattaacc 203
              |||||||||||||||||||||
Sbjct: 121645 gaagcaatgtctccattaacc 121665
to top
>ref|XM_575607.1| PREDICTED: Rattus norvegicus similar to cDNA sequence BC022133
            (LOC362399), mRNA
          Length = 7155

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 308  cgcgccacgcccacgcccacg 328
            |||||||||||||||||||||
Sbjct: 2441 cgcgccacgcccacgcccacg 2461
to top
>gb|AC023724.5| Drosophila melanogaster X BAC RP98-14B2 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 181974

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 309   gcgccacgcccacgcccacgc 329
             |||||||||||||||||||||
Sbjct: 72059 gcgccacgcccacgcccacgc 72079
to top
>gb|AE003445.2| Drosophila melanogaster chromosome X, section 29 of 74 of the complete
             sequence
          Length = 334222

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 309   gcgccacgcccacgcccacgc 329
             |||||||||||||||||||||
Sbjct: 82264 gcgccacgcccacgcccacgc 82244
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 305     agccgcgccacgcccacgcccacgc 329
               |||| ||||||||||||||||||||
Sbjct: 1280354 agccacgccacgcccacgcccacgc 1280330
to top
>emb|BX000509.2|CNS08CDZ Oryza sativa chromosome 12, . BAC OJ1085_G07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 121556

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 305   agccgcgccacgcccacgcccacgc 329
             |||| ||||||||||||||||||||
Sbjct: 12428 agccacgccacgcccacgcccacgc 12452
to top
>emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003_C01 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 157453

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 305    agccgcgccacgcccacgcccacgc 329
              |||| ||||||||||||||||||||
Sbjct: 148815 agccacgccacgcccacgcccacgc 148839
to top
>gb|AC134236.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0056G13, complete sequence
          Length = 148011

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 310   cgccacgcccacgcccacgc 329
             ||||||||||||||||||||
Sbjct: 56608 cgccacgcccacgcccacgc 56627
to top
>ref|XM_522717.1| PREDICTED: Pan troglodytes similar to 60S ribosomal protein L35
           (LOC467319), mRNA
          Length = 306

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 38  cccctgaccctgaggcctga 57
           ||||||||||||||||||||
Sbjct: 238 cccctgaccctgaggcctga 257
to top
>ref|NM_015336.1| Homo sapiens zinc finger, DHHC-type containing 17 (ZDHHC17), mRNA
          Length = 5272

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 316 gcccacgcccacgcgctccc 335
           ||||||||||||||||||||
Sbjct: 223 gcccacgcccacgcgctccc 204
to top
>gb|AC104270.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1037_G10,
             complete sequence
          Length = 181130

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 305   agccgcgccacgcccacgcccacg 328
             |||| |||||||||||||||||||
Sbjct: 33193 agccacgccacgcccacgcccacg 33170
to top
>gb|AY753025.1| Penaeus monodon clone t516 microsatellite sequence
          Length = 623

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 80  gccatcgcatcgtcatcgtc 99
           ||||||||||||||||||||
Sbjct: 399 gccatcgcatcgtcatcgtc 418
to top
>gb|AC130598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0056I11, complete sequence
          Length = 145796

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 310   cgccacgcccacgcccacgc 329
             ||||||||||||||||||||
Sbjct: 96866 cgccacgcccacgcccacgc 96885
to top
>ref|XM_426714.1| PREDICTED: Gallus gallus similar to homolog of polyhomeotic 3
           (LOC429159), mRNA
          Length = 3060

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 329 cgctccccctcctccgcgcg 348
           ||||||||||||||||||||
Sbjct: 147 cgctccccctcctccgcgcg 128
to top
>gb|AC149132.1| Pan troglodytes chromosome X clone PTB-099J01 map human ortholog p22.12
              complete sequence
          Length = 215862

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 350    ccctctgcgccgcaccaacatcac 373
              ||||||| ||||||||||||||||
Sbjct: 183801 ccctctgggccgcaccaacatcac 183824
to top
>gb|AC118138.2| Homo sapiens BAC clone RP11-451K15 from 7, complete sequence
          Length = 180150

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    atcccctgaccctgaggcct 55
             ||||||||||||||||||||
Sbjct: 85021 atcccctgaccctgaggcct 85002
to top
>emb|BX901930.17| Zebrafish DNA sequence from clone RP71-15D4 in linkage group 8,
             complete sequence
          Length = 95078

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 312   ccacgcccacgcccacgcgc 331
             ||||||||||||||||||||
Sbjct: 63905 ccacgcccacgcccacgcgc 63924
to top
>emb|AL807772.12| Human DNA sequence from clone RP11-188G3 on chromosome X Contains the
             5' end of the RPS6KA3 gene for ribosomal protein S6
             kinase, 90kDa, polypeptide 3 (RSK, HU-2, HU-3, RSK2,
             MRX19, ISPK-1, MAPKAPK1B) and a CpG island, complete
             sequence
          Length = 129996

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 350   ccctctgcgccgcaccaacatcac 373
             ||||||| ||||||||||||||||
Sbjct: 93492 ccctctgggccgcaccaacatcac 93515
to top
>ref|XM_504747.1| Yarrowia lipolytica CLIB122, YALI0E33825g predicted mRNA
          Length = 4389

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 8    gcgagagacagcggcgtctt 27
            ||||||||||||||||||||
Sbjct: 3761 gcgagagacagcggcgtctt 3780
to top
>gb|AC099533.36| Pan troglodytes clone rp43-41g5, complete sequence
          Length = 226331

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     cctgaccctgaggcctgacc 59
              ||||||||||||||||||||
Sbjct: 196574 cctgaccctgaggcctgacc 196555



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     cctgaccctgaggcctgacc 59
              ||||||||||||||||||||
Sbjct: 185173 cctgaccctgaggcctgacc 185154
to top
>emb|AL136159.11| Human DNA sequence from clone RP11-165M6 on chromosome 13 Contains a
             novel gene and a ribosomal protein L35 (RPL35) pseudogene,
             complete sequence
          Length = 74012

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    cccctgaccctgaggcctga 57
             ||||||||||||||||||||
Sbjct: 66684 cccctgaccctgaggcctga 66703
to top
>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16
          Length = 348074

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 300    caggaagccgcgccacgccc 319
              ||||||||||||||||||||
Sbjct: 271296 caggaagccgcgccacgccc 271315
to top
>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16
          Length = 348642

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 309    gcgccacgcccacgcccacg 328
              ||||||||||||||||||||
Sbjct: 305684 gcgccacgcccacgcccacg 305665
to top
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14
          Length = 344805

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 300    caggaagccgcgccacgccc 319
              ||||||||||||||||||||
Sbjct: 215526 caggaagccgcgccacgccc 215545
to top
>emb|BX640420.1| Bordetella pertussis strain Tohama I, complete genome; segment 10/12
          Length = 348134

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 300   caggaagccgcgccacgccc 319
             ||||||||||||||||||||
Sbjct: 71361 caggaagccgcgccacgccc 71380
to top
>emb|AL662987.3|OSJN00188 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088A01,
             complete sequence
          Length = 186325

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 312   ccacgcccacgcccacgcgc 331
             ||||||||||||||||||||
Sbjct: 47849 ccacgcccacgcccacgcgc 47830
to top
>gb|AC093014.11| Homo sapiens 12 BAC RP11-734E19 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 97495

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 316   gcccacgcccacgcgctccc 335
             ||||||||||||||||||||
Sbjct: 75458 gcccacgcccacgcgctccc 75477
to top
>dbj|AK124543.1| Homo sapiens cDNA FLJ42552 fis, clone BRACE3005217
          Length = 3705

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 350  ccctctgcgccgcaccaacatcac 373
            ||||||| ||||||||||||||||
Sbjct: 3361 ccctctgggccgcaccaacatcac 3338
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>gb|AC148301.3| Pan troglodytes BAC clone CH251-69O15 from chromosome 7, complete
             sequence
          Length = 166304

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    atcccctgaccctgaggcct 55
             ||||||||||||||||||||
Sbjct: 85319 atcccctgaccctgaggcct 85300
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>ref|XM_937876.1| PREDICTED: Homo sapiens similar to 60S ribosomal protein L35
           (LOC341604), mRNA
          Length = 306

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 38  cccctgaccctgaggcctga 57
           ||||||||||||||||||||
Sbjct: 238 cccctgaccctgaggcctga 257
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>ref|XM_296315.3| PREDICTED: Homo sapiens similar to 60S ribosomal protein L35
           (LOC341604), mRNA
          Length = 306

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 38  cccctgaccctgaggcctga 57
           ||||||||||||||||||||
Sbjct: 238 cccctgaccctgaggcctga 257
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>gb|AC012331.9| Homo sapiens chromosome 22 clone b41c4 map 22q11, complete sequence
          Length = 143376

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    cctgaccctgaggcctgacc 59
             ||||||||||||||||||||
Sbjct: 27987 cctgaccctgaggcctgacc 28006
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>gb|AC004166.12| Homo sapiens Chromosome 7 BAC Clone 239c10, complete sequence
          Length = 275197

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 36     atcccctgaccctgaggcct 55
              ||||||||||||||||||||
Sbjct: 242569 atcccctgaccctgaggcct 242588
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>gb|AC002308.1| Homo sapiens Chromosome 22q11.2 BAC Clone 1000e4 In IGLC Region, complete
              sequence
          Length = 151111

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     cctgaccctgaggcctgacc 59
              ||||||||||||||||||||
Sbjct: 150252 cctgaccctgaggcctgacc 150233



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    cctgaccctgaggcctgacc 59
             ||||||||||||||||||||
Sbjct: 89607 cctgaccctgaggcctgacc 89588
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 310      cgccacgcccacgcccacgc 329
                ||||||||||||||||||||
Sbjct: 16465624 cgccacgcccacgcccacgc 16465643
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 310      cgccacgcccacgcccacgc 329
                ||||||||||||||||||||
Sbjct: 16157407 cgccacgcccacgcccacgc 16157388
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 312      ccacgcccacgcccacgcgctccccctc 339
                |||||||||||||||||| ||| |||||
Sbjct: 29345883 ccacgcccacgcccacgccctcgccctc 29345856
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 305     agccgcgccacgcccacgcccacg 328
               |||| |||||||||||||||||||
Sbjct: 8821268 agccacgccacgcccacgcccacg 8821245



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 310     cgccacgcccacgcccacgc 329
               ||||||||||||||||||||
Sbjct: 1644706 cgccacgcccacgcccacgc 1644725
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 310      cgccacgcccacgcccacgc 329
                ||||||||||||||||||||
Sbjct: 13787558 cgccacgcccacgcccacgc 13787539
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>dbj|AP003205.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1146B04
          Length = 145186

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 310    cgccacgcccacgcccacgc 329
              ||||||||||||||||||||
Sbjct: 125886 cgccacgcccacgcccacgc 125867
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>dbj|AP005256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0038F09
          Length = 166568

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 310    cgccacgcccacgcccacgc 329
              ||||||||||||||||||||
Sbjct: 127740 cgccacgcccacgcccacgc 127721
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>dbj|AP003621.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0621D05
          Length = 180250

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 312   ccacgcccacgcccacgcgctccccctc 339
             |||||||||||||||||| ||| |||||
Sbjct: 56764 ccacgcccacgcccacgccctcgccctc 56737
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>dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0018H04
          Length = 142053

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 312    ccacgcccacgcccacgcgctccccctc 339
              |||||||||||||||||| ||| |||||
Sbjct: 108681 ccacgcccacgcccacgccctcgccctc 108654
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>dbj|AP003852.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0440D10
          Length = 144340

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 310   cgccacgcccacgcccacgc 329
             ||||||||||||||||||||
Sbjct: 24961 cgccacgcccacgcccacgc 24942
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>dbj|AP005419.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0046G12
          Length = 189391

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 310    cgccacgcccacgcccacgc 329
              ||||||||||||||||||||
Sbjct: 154171 cgccacgcccacgcccacgc 154190
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>dbj|AK100716.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023115O05, full
           insert sequence
          Length = 2688

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 310 cgccacgcccacgcccacgc 329
           ||||||||||||||||||||
Sbjct: 87  cgccacgcccacgcccacgc 106
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>dbj|AB024494.1| Homo sapiens HIP3 mRNA for huntingtin interacting protein 3,
           complete cds
          Length = 5272

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 316 gcccacgcccacgcgctccc 335
           ||||||||||||||||||||
Sbjct: 223 gcccacgcccacgcgctccc 204
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>ref|NG_000002.1| Homo sapiens immunoglobulin lambda locus (IGL@) on chromosome 22
          Length = 909203

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     cctgaccctgaggcctgacc 59
              ||||||||||||||||||||
Sbjct: 717253 cctgaccctgaggcctgacc 717234



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     cctgaccctgaggcctgacc 59
              ||||||||||||||||||||
Sbjct: 656600 cctgaccctgaggcctgacc 656581
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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 8       gcgagagacagcggcgtctt 27
               ||||||||||||||||||||
Sbjct: 4020099 gcgagagacagcggcgtctt 4020118
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>gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1217B09,
              complete sequence
          Length = 148894

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 310    cgccacgcccacgcccacgc 329
              ||||||||||||||||||||
Sbjct: 128082 cgccacgcccacgcccacgc 128063
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>dbj|D86994.1| Homo sapiens immunoglobulin lambda gene locus DNA, clone:102D1
          Length = 37760

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    cctgaccctgaggcctgacc 59
             ||||||||||||||||||||
Sbjct: 27607 cctgaccctgaggcctgacc 27588
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>dbj|D87015.2| Homo sapiens immunoglobulin lambda gene locus DNA, clone:68D6
          Length = 36240

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    cctgaccctgaggcctgacc 59
             ||||||||||||||||||||
Sbjct: 20628 cctgaccctgaggcctgacc 20609


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,374,842
Number of Sequences: 3902068
Number of extensions: 2374842
Number of successful extensions: 47077
Number of sequences better than 10.0: 104
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 46364
Number of HSP's gapped (non-prelim): 713
length of query: 385
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 363
effective length of database: 17,147,199,772
effective search space: 6224433517236
effective search space used: 6224433517236
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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