ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl45a02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 ... 42 5e-04
2PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (... 35 0.061
3BRL1_ARATH (Q9ZWC8) Serine/threonine-protein kinase BRI1-like 1 ... 35 0.10
4BRL3_ARATH (Q9LJF3) Serine/threonine-protein kinase BRI1-like 3 ... 34 0.18
5BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated rec... 32 0.67
6RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC... 30 1.9
7YR753_MIMIV (Q5UP09) Putative F-box/LRR-repeat protein R753 29 4.3
8NRFA_PENUR (Q92269) Nitrogen regulatory protein nrfA 29 5.7
9RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2... 28 9.7

>BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 precursor (EC|
           2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 2)
           (Protein VASCULAR HIGHWAY 1)
          Length = 1143

 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 28/78 (35%), Positives = 37/78 (47%)
 Frame = +1

Query: 196 LLRFKASVQKDPRGVLXXXXXXXXXXXXXXXXXXXXXXXCKWYGVTCDGKGRVERLDLAG 375
           LL FK  +Q DP  +L                       C++ GVTC G GRV  ++L+G
Sbjct: 43  LLSFKTMIQDDPNNILSNWSPRKSP--------------CQFSGVTCLG-GRVTEINLSG 87

Query: 376 CRLSGRASFAALASIDTL 429
             LSG  SF A  S+D+L
Sbjct: 88  SGLSGIVSFNAFTSLDSL 105



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>PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (EC 2.7.11.1)|
           (Phytosulfokine LRR receptor kinase)
          Length = 1008

 Score = 35.4 bits (80), Expect = 0.061
 Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
 Frame = +1

Query: 313 CKWYGVTCDGK--GRVERLDLAGCRLSGRASFAALASIDTLR 432
           C W G+TC+    GRV RL+L   +LSG+ S  +L  +D +R
Sbjct: 63  CNWTGITCNSNNTGRVIRLELGNKKLSGKLS-ESLGKLDEIR 103



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>BRL1_ARATH (Q9ZWC8) Serine/threonine-protein kinase BRI1-like 1 precursor (EC|
           2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 1)
          Length = 1166

 Score = 34.7 bits (78), Expect = 0.10
 Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
 Frame = +1

Query: 196 LLRFKA-SVQKDPRGVLXXXXXXXXXXXXXXXXXXXXXXXCKWYGVTCDGKGRVERLDLA 372
           LL FK  SV+ DP  VL                       C W GV+C   GR+  LDL 
Sbjct: 38  LLAFKQNSVKSDPNNVLGNWKYESGRGS------------CSWRGVSCSDDGRIVGLDLR 85

Query: 373 GCRLSGRASFAALASIDTLRH 435
              L+G  +   L ++  L++
Sbjct: 86  NSGLTGTLNLVNLTALPNLQN 106



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>BRL3_ARATH (Q9LJF3) Serine/threonine-protein kinase BRI1-like 3 precursor (EC|
           2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 3)
          Length = 1164

 Score = 33.9 bits (76), Expect = 0.18
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +1

Query: 313 CKWYGVTCDGKGRVERLDLAGCRLSGRASFAALASIDTLR 432
           C W GV+C   GRV  LDL    L+G  +   L ++  LR
Sbjct: 65  CTWRGVSCSSDGRVIGLDLRNGGLTGTLNLNNLTALSNLR 104



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>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1|
           precursor (EC 2.7.11.1) (BRI1-associated receptor kinase
           1) (Somatic embryogenesis receptor-like kinase 3)
          Length = 615

 Score = 32.0 bits (71), Expect = 0.67
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 313 CKWYGVTCDGKGRVERLDLAGCRLSGR 393
           C W+ VTC+    V R+DL    LSG+
Sbjct: 57  CTWFHVTCNSDNSVTRVDLGNANLSGQ 83



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>RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC 2.7.11.1)|
          Length = 999

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 313 CKWYGVTCDGKGRVERLDLAGCRLSG 390
           CKW GV+CD    V  +DL+   L G
Sbjct: 54  CKWLGVSCDATSNVVSVDLSSFMLVG 79



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>YR753_MIMIV (Q5UP09) Putative F-box/LRR-repeat protein R753|
          Length = 751

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 8/45 (17%)
 Frame = +1

Query: 319 WYGVTCDGK--------GRVERLDLAGCRLSGRASFAALASIDTL 429
           W+ V C+ K          V +LDL  CR     S +AL +I+T+
Sbjct: 41  WFDVKCNNKVFGGLNMFANVRKLDLQECRCITNESLSALTNIETI 85



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>NRFA_PENUR (Q92269) Nitrogen regulatory protein nrfA|
          Length = 865

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -2

Query: 434 WRSVSMEASAANEARPERRQPARSSRSTRPLPS 336
           WR ++M        + ER Q AR+S +  P PS
Sbjct: 106 WRMMAMNLKRKEREQQEREQQARASETVSPAPS 138



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>RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2.7.11.1)|
          Length = 1109

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 313 CKWYGVTCDGKGRVERLDLAGCRLSG 390
           C W GV CD +  V+ L+L+   +SG
Sbjct: 57  CSWLGVECDRRQFVDTLNLSSYGISG 82


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,263,111
Number of Sequences: 219361
Number of extensions: 246074
Number of successful extensions: 844
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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