ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl45a01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_080362.2| Drosophila melanogaster SAM-motif ubiquitously ... 46 0.10
2gb|AC092226.1|AC092226 Drosophila melanogaster, chromosome 2L, r... 46 0.10
3gb|AE003630.2| Drosophila melanogaster chromosome 2L, section 39... 46 0.10
4gb|AC005117.1|AC005117 Drosophila melanogaster, chromosome 2L, r... 46 0.10
5gb|BT019107.1| Zea mays clone Contig712.F mRNA sequence 44 0.40
6ref|XM_450652.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
7gb|AC136787.4| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
8ref|XM_824274.1| Trypanosoma brucei TREU927 hypothetical protein... 42 1.6
9emb|AJ966469.1| Meleagris gallopavo mRNA for iron binding protei... 42 1.6
10emb|CR555306.1| Azoarcus sp. EbN1 complete genome 42 1.6
11emb|BX294134.1| Pirellula sp. strain 1 complete genome; segment ... 42 1.6
12dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
13dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
14dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
15dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
16dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
17dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 42 1.6
18dbj|AP004739.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
19dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
20emb|BX000346.3|CNS08CDC Oryza sativa chromosome 12, . BAC OSJNBb... 42 1.6
21dbj|AP005870.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
22emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 42 1.6
23gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
24gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
25emb|BX649218.2|CNS09SBX Oryza sativa chromosome 12, . BAC B1280F... 42 1.6
26emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.6
27ref|XM_523345.1| PREDICTED: Pan troglodytes similar to KIAA0326 ... 40 6.2
28ref|NM_197155.1| Oryza sativa (japonica cultivar-group) putative... 40 6.2
29ref|XM_518263.1| PREDICTED: Pan troglodytes similar to CDK5 regu... 40 6.2
30ref|NM_197113.1| Oryza sativa (japonica cultivar-group) hypothet... 40 6.2
31gb|BT016754.1| Zea mays clone Contig587 mRNA sequence 40 6.2
32gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
33gb|AC125233.4| Mus musculus BAC clone RP23-9D24 from chromosome ... 40 6.2
34gb|AY294226.1| Uncultured bacterium cosmid gbiox603r, complete s... 40 6.2
35ref|XM_856522.1| PREDICTED: Canis familiaris similar to formin-l... 40 6.2
36ref|XM_543681.2| PREDICTED: Canis familiaris similar to formin-l... 40 6.2
37gb|AC146481.2| Oryza sativa chromosome 10 B1288B10 genomic sequ... 40 6.2
38ref|XM_750114.1| Aspergillus fumigatus Af293 hypothetical protei... 40 6.2
39emb|CR732287.2|CNS0GRZ8 Tetraodon nigroviridis full-length cDNA 40 6.2
40emb|CR726964.2|CNS0GNVE Tetraodon nigroviridis full-length cDNA 40 6.2
41emb|CR691807.2|CNS0FWQZ Tetraodon nigroviridis full-length cDNA 40 6.2
42emb|AL512405.13| Human DNA sequence from clone RP11-370N21 on ch... 40 6.2
43emb|BX294138.1| Pirellula sp. strain 1 complete genome; segment ... 40 6.2
44gb|AC092211.7| Oryza sativa chromosome 10 P0031G09 genomic sequ... 40 6.2
45emb|BX511018.18| Zebrafish DNA sequence from clone DKEY-241H1 in... 40 6.2
46gb|AC068950.11| Oryza sativa chromosome 10 BAC OSJNBa0041P03 gen... 40 6.2
47dbj|AP003380.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
48emb|BX649331.16| Zebrafish DNA sequence from clone DKEY-12N3 in ... 40 6.2
49dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 6.2
50gb|AC100757.2| Homo sapiens chromosome 15, clone RP11-566K19, co... 40 6.2
51emb|BX119930.5| Zebrafish DNA sequence from clone DKEY-18G4 in l... 40 6.2
52gb|DP000047.1| Saimiri boliviensis boliviensis target 106 genomi... 40 6.2
53emb|BX649431.16| Zebrafish DNA sequence from clone DKEYP-44B5 in... 40 6.2
54gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 6.2
55gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 6.2
56dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
57dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
58dbj|AP002537.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
59dbj|AP003417.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
60dbj|AP006531.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
61dbj|AP005742.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
62dbj|AP004730.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
63dbj|AP004328.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
64dbj|AP005305.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
65dbj|AP005843.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
66emb|BX004869.13| Zebrafish DNA sequence from clone CH211-69E21 i... 40 6.2
67dbj|AK074342.1| Homo sapiens cDNA FLJ23762 fis, clone HEP18324 40 6.2
68dbj|AK111207.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
69dbj|AK101819.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
70dbj|AK072042.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
71gb|AF169627.1|AF169627 Oryctolagus cuniculus Galpha16 mRNA, comp... 40 6.2
72dbj|AK059574.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
73gb|AY105831.1| Zea mays PCO126824 mRNA sequence 40 6.2
74gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
75emb|AL713951.4|CNS07YPU Oryza sativa chromosome 12, . BAC OJ1111... 40 6.2
76emb|AL928758.3|CNS08CBV Oryza sativa chromosome 12, . BAC OSJNBb... 40 6.2
77dbj|AP006383.1| Lotus japonicus genomic DNA, chromosome 6, clone... 40 6.2
78gb|AY560732.1| Ciboneya antraia 28S ribosomal RNA gene, partial ... 40 6.2 
>ref|NM_080362.2| Drosophila melanogaster SAM-motif ubiquitously expressed punctatedly
            localized protein CG31868-RA (Samuel), mRNA
          Length = 4167

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 225  tccgcctccaccgccggctcctc 247
            |||||||||||||||||||||||
Sbjct: 2456 tccgcctccaccgccggctcctc 2434
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>gb|AC092226.1|AC092226 Drosophila melanogaster, chromosome 2L, region 32A-32B, BAC clone
             BACR20O15, complete sequence
          Length = 169210

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 225   tccgcctccaccgccggctcctc 247
             |||||||||||||||||||||||
Sbjct: 68698 tccgcctccaccgccggctcctc 68720
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>gb|AE003630.2| Drosophila melanogaster chromosome 2L, section 39 of 83 of the complete
              sequence
          Length = 289460

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 225    tccgcctccaccgccggctcctc 247
              |||||||||||||||||||||||
Sbjct: 262296 tccgcctccaccgccggctcctc 262318
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>gb|AC005117.1|AC005117 Drosophila melanogaster, chromosome 2L, region 32D1-32D2, P1 clone
            DS04313, complete sequence
          Length = 69019

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 225  tccgcctccaccgccggctcctc 247
            |||||||||||||||||||||||
Sbjct: 4268 tccgcctccaccgccggctcctc 4290
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>gb|BT019107.1| Zea mays clone Contig712.F mRNA sequence
          Length = 841

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 78  tccgcctctgccgccgctcgtc 99
           ||||||||||||||||||||||
Sbjct: 257 tccgcctctgccgccgctcgtc 236
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>ref|XM_450652.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 954

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 225 tccgcctccaccgccggctcc 245
           |||||||||||||||||||||
Sbjct: 228 tccgcctccaccgccggctcc 208
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>gb|AC136787.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0052B22, complete sequence
          Length = 156725

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 225   tccgcctccaccgccggctcc 245
             |||||||||||||||||||||
Sbjct: 99646 tccgcctccaccgccggctcc 99626
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>ref|XM_824274.1| Trypanosoma brucei TREU927 hypothetical protein (Tb11.01.4680)
           partial mRNA
          Length = 1086

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 141 gcccctgcttccgccgctcct 161
           |||||||||||||||||||||
Sbjct: 517 gcccctgcttccgccgctcct 497
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>emb|AJ966469.1| Meleagris gallopavo mRNA for iron binding protein (trfe gene)
          Length = 2397

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 100  ctgcttcctctgcccatcctc 120
            |||||||||||||||||||||
Sbjct: 2301 ctgcttcctctgcccatcctc 2321
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 284     cgcgacgcctttgccgcggcc 304
               |||||||||||||||||||||
Sbjct: 2518725 cgcgacgcctttgccgcggcc 2518745
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>emb|BX294134.1| Pirellula sp. strain 1 complete genome; segment 2/24
          Length = 304450

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 282    cccgcgacgcctttgccgcgg 302
              |||||||||||||||||||||
Sbjct: 229075 cccgcgacgcctttgccgcgg 229095
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 340     tgacgcacaccacatgttcgacgaa 364
               |||||| ||||||||||||||||||
Sbjct: 5555988 tgacgcccaccacatgttcgacgaa 5555964



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 185     ctccacctccgccactgctccacc 208
               ||||||| ||||||||||||||||
Sbjct: 9565004 ctccaccaccgccactgctccacc 9564981



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 224     gtccgcctccaccgccggct 243
               ||||||||||||||||||||
Sbjct: 2845342 gtccgcctccaccgccggct 2845361
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 225      tccgcctccaccgccggctcc 245
                |||||||||||||||||||||
Sbjct: 16784084 tccgcctccaccgccggctcc 16784064
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 225      tccgcctccaccgccggctcc 245
                |||||||||||||||||||||
Sbjct: 12031535 tccgcctccaccgccggctcc 12031555



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 245      ctctcctccacctcgccgcc 264
                ||||||||||||||||||||
Sbjct: 21566794 ctctcctccacctcgccgcc 21566775
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 340     tgacgcacaccacatgttcgacgaa 364
               |||||| ||||||||||||||||||
Sbjct: 7165849 tgacgcccaccacatgttcgacgaa 7165825



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 244      cctctcctccacctcgccgc 263
                ||||||||||||||||||||
Sbjct: 12026953 cctctcctccacctcgccgc 12026972
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 247      ctcctccacctcgccgccctc 267
                |||||||||||||||||||||
Sbjct: 20927856 ctcctccacctcgccgccctc 20927876



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 224      gtccgcctccaccgccggct 243
                ||||||||||||||||||||
Sbjct: 19062885 gtccgcctccaccgccggct 19062866
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 54      cgttgccgccgacgatgtcgc 74
               |||||||||||||||||||||
Sbjct: 6418772 cgttgccgccgacgatgtcgc 6418792
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>dbj|AP004739.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0090E14
          Length = 161119

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 247   ctcctccacctcgccgccctc 267
             |||||||||||||||||||||
Sbjct: 54780 ctcctccacctcgccgccctc 54800
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>dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0441A12
          Length = 185437

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 225    tccgcctccaccgccggctcc 245
              |||||||||||||||||||||
Sbjct: 136015 tccgcctccaccgccggctcc 136035
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>emb|BX000346.3|CNS08CDC Oryza sativa chromosome 12, . BAC OSJNBb0084C05 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 117585

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 340   tgacgcacaccacatgttcgacgaa 364
             |||||| ||||||||||||||||||
Sbjct: 42151 tgacgcccaccacatgttcgacgaa 42175
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>dbj|AP005870.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1049E04
          Length = 159216

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 340   tgacgcacaccacatgttcgacgaa 364
             |||||| ||||||||||||||||||
Sbjct: 35108 tgacgcccaccacatgttcgacgaa 35084
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 50      cggccgttgccgccgacgatg 70
               |||||||||||||||||||||
Sbjct: 3687856 cggccgttgccgccgacgatg 3687836
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 225      tccgcctccaccgccggctcc 245
                |||||||||||||||||||||
Sbjct: 16877854 tccgcctccaccgccggctcc 16877834
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 340     tgacgcacaccacatgttcgacgaa 364
               |||||| ||||||||||||||||||
Sbjct: 5555977 tgacgcccaccacatgttcgacgaa 5555953



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 185     ctccacctccgccactgctccacc 208
               ||||||| ||||||||||||||||
Sbjct: 9564889 ctccaccaccgccactgctccacc 9564866



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 224     gtccgcctccaccgccggct 243
               ||||||||||||||||||||
Sbjct: 2845286 gtccgcctccaccgccggct 2845305
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>emb|BX649218.2|CNS09SBX Oryza sativa chromosome 12, . BAC B1280F04 of chromosome 12 of cultivar
              Nipponbare of ssp. japonica of Oryza sativa (rice),
              complete sequence
          Length = 160556

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 340    tgacgcacaccacatgttcgacgaa 364
              |||||| ||||||||||||||||||
Sbjct: 108793 tgacgcccaccacatgttcgacgaa 108769
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>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 139684

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 340   tgacgcacaccacatgttcgacgaa 364
             |||||| ||||||||||||||||||
Sbjct: 96897 tgacgcccaccacatgttcgacgaa 96921
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>ref|XM_523345.1| PREDICTED: Pan troglodytes similar to KIAA0326 (LOC467952), mRNA
          Length = 3213

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 261  cgccctcaccttcctggtct 280
            ||||||||||||||||||||
Sbjct: 3043 cgccctcaccttcctggtct 3024
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>ref|NM_197155.1| Oryza sativa (japonica cultivar-group) putative chloroplast RNA
           processing protein (OSJNBa0041P03.13), mRNA
          Length = 1386

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 341 gacgcacaccacatgttcgacgaattgtttcg 372
           ||||||| |||| |||||||||||||| ||||
Sbjct: 88  gacgcacgccacgtgttcgacgaattgcttcg 119
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>ref|XM_518263.1| PREDICTED: Pan troglodytes similar to CDK5 regulatory subunit
            associated protein 1-like 1 (LOC462466), mRNA
          Length = 2736

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   cctgcttcctctgcccatcc 118
            ||||||||||||||||||||
Sbjct: 1628 cctgcttcctctgcccatcc 1609
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>ref|NM_197113.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (P0031G09.4), mRNA
          Length = 489

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 229 cctccaccgccggctcctctcctc 252
           ||||||||||||||||| ||||||
Sbjct: 169 cctccaccgccggctcccctcctc 192
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>gb|BT016754.1| Zea mays clone Contig587 mRNA sequence
          Length = 1458

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 246 tctcctccacctcgccgccc 265
           ||||||||||||||||||||
Sbjct: 148 tctcctccacctcgccgccc 129
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>gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone
             OSJNBb0031H05, complete sequence
          Length = 141200

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 245   ctctcctccacctcgccgcc 264
             ||||||||||||||||||||
Sbjct: 23420 ctctcctccacctcgccgcc 23401
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>gb|AC125233.4| Mus musculus BAC clone RP23-9D24 from chromosome 5, complete sequence
          Length = 212792

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 98     tcctgcttcctctgcccatc 117
              ||||||||||||||||||||
Sbjct: 165439 tcctgcttcctctgcccatc 165420
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>gb|AY294226.1| Uncultured bacterium cosmid gbiox603r, complete sequence
          Length = 40150

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 405  acggcttccttgccgctctcgcccgtgc 432
            ||||| ||||||||||| ||||||||||
Sbjct: 4095 acggcctccttgccgctgtcgcccgtgc 4068
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>ref|XM_856522.1| PREDICTED: Canis familiaris similar to formin-like 3 isoform 1,
            transcript variant 2 (LOC486555), mRNA
          Length = 3926

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 228  gcctccaccgccggctcctc 247
            ||||||||||||||||||||
Sbjct: 1448 gcctccaccgccggctcctc 1467
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>ref|XM_543681.2| PREDICTED: Canis familiaris similar to formin-like 3 isoform 1,
            transcript variant 1 (LOC486555), mRNA
          Length = 4079

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 228  gcctccaccgccggctcctc 247
            ||||||||||||||||||||
Sbjct: 1601 gcctccaccgccggctcctc 1620
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>gb|AC146481.2| Oryza sativa chromosome 10  B1288B10 genomic sequence, complete
             sequence
          Length = 58734

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 229   cctccaccgccggctcctctcctc 252
             ||||||||||||||||| ||||||
Sbjct: 43020 cctccaccgccggctcccctcctc 42997
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>ref|XM_750114.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g08730)
           partial mRNA
          Length = 1377

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 145 ctgcttccgccgctcctcct 164
           ||||||||||||||||||||
Sbjct: 792 ctgcttccgccgctcctcct 773
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>emb|CR732287.2|CNS0GRZ8 Tetraodon nigroviridis full-length cDNA
          Length = 1496

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 239 cggctcctctcctccacctc 258
           ||||||||||||||||||||
Sbjct: 209 cggctcctctcctccacctc 190
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>emb|CR726964.2|CNS0GNVE Tetraodon nigroviridis full-length cDNA
          Length = 1464

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 239 cggctcctctcctccacctc 258
           ||||||||||||||||||||
Sbjct: 173 cggctcctctcctccacctc 154
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>emb|CR691807.2|CNS0FWQZ Tetraodon nigroviridis full-length cDNA
          Length = 1438

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 239 cggctcctctcctccacctc 258
           ||||||||||||||||||||
Sbjct: 143 cggctcctctcctccacctc 124
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>emb|AL512405.13| Human DNA sequence from clone RP11-370N21 on chromosome 6 Contains
            part of a novel gene (FLJ20342), complete sequence
          Length = 11400

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   cctgcttcctctgcccatcc 118
            ||||||||||||||||||||
Sbjct: 3893 cctgcttcctctgcccatcc 3874
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>emb|BX294138.1| Pirellula sp. strain 1 complete genome; segment 6/24
          Length = 321950

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 180    ccggcctccacctccgccac 199
              ||||||||||||||||||||
Sbjct: 282085 ccggcctccacctccgccac 282066
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>gb|AC092211.7| Oryza sativa chromosome 10  P0031G09 genomic sequence, complete
             sequence
          Length = 17072

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 229   cctccaccgccggctcctctcctc 252
             ||||||||||||||||| ||||||
Sbjct: 11128 cctccaccgccggctcccctcctc 11105
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>emb|BX511018.18| Zebrafish DNA sequence from clone DKEY-241H1 in linkage group 4
             Contains eight novel genes and three CpG islands, complete
             sequence
          Length = 95944

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   gccaaagtccggcctccacc 191
             ||||||||||||||||||||
Sbjct: 32905 gccaaagtccggcctccacc 32924
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>gb|AC068950.11| Oryza sativa chromosome 10 BAC OSJNBa0041P03 genomic sequence, complete
             sequence
          Length = 139614

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 341   gacgcacaccacatgttcgacgaattgtttcg 372
             ||||||| |||| |||||||||||||| ||||
Sbjct: 41367 gacgcacgccacgtgttcgacgaattgcttcg 41398
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>dbj|AP003380.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0497A05
          Length = 130919

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 244   cctctcctccacctcgccgc 263
             ||||||||||||||||||||
Sbjct: 31164 cctctcctccacctcgccgc 31145
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>emb|BX649331.16| Zebrafish DNA sequence from clone DKEY-12N3 in linkage group 11, complete
              sequence
          Length = 252675

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    gccaaagtccggcctccacc 191
              ||||||||||||||||||||
Sbjct: 163149 gccaaagtccggcctccacc 163168
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 58      gccgccgacgatgtcgcgca 77
               ||||||||||||||||||||
Sbjct: 4333045 gccgccgacgatgtcgcgca 4333026
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>gb|AC100757.2| Homo sapiens chromosome 15, clone RP11-566K19, complete sequence
          Length = 171987

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 184   cctccacctccgccactgct 203
             ||||||||||||||||||||
Sbjct: 44729 cctccacctccgccactgct 44710
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>emb|BX119930.5| Zebrafish DNA sequence from clone DKEY-18G4 in linkage group 3,
             complete sequence
          Length = 186318

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 235   ccgccggctcctctcctcca 254
             ||||||||||||||||||||
Sbjct: 85672 ccgccggctcctctcctcca 85691
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>gb|DP000047.1| Saimiri boliviensis boliviensis target 106 genomic scaffold
          Length = 211360

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 101    tgcttcctctgcccatcctccttt 124
              |||||| |||||||||||||||||
Sbjct: 169945 tgcttcatctgcccatcctccttt 169922
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>emb|BX649431.16| Zebrafish DNA sequence from clone DKEYP-44B5 in linkage group 14,
             complete sequence
          Length = 185020

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   gccaaagtccggcctccacc 191
             ||||||||||||||||||||
Sbjct: 26490 gccaaagtccggcctccacc 26471
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 254     acctcgccgccctcaccttcctgg 277
               |||||||||||| |||||||||||
Sbjct: 3264506 acctcgccgcccgcaccttcctgg 3264483
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 194    cgccactgctccaccacgcc 213
              ||||||||||||||||||||
Sbjct: 951363 cgccactgctccaccacgcc 951344
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 341      gacgcacaccacatgttcgacgaattgtttcg 372
                ||||||| |||| |||||||||||||| ||||
Sbjct: 18309403 gacgcacgccacgtgttcgacgaattgcttcg 18309372



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 229      cctccaccgccggctcctctcctc 252
                ||||||||||||||||| ||||||
Sbjct: 18070887 cctccaccgccggctcccctcctc 18070864
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 244      cctctcctccacctcgccgc 263
                ||||||||||||||||||||
Sbjct: 39476722 cctctcctccacctcgccgc 39476703



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 224     gtccgcctccaccgccggct 243
               ||||||||||||||||||||
Sbjct: 5088500 gtccgcctccaccgccggct 5088519
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>dbj|AP002537.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0001B06
          Length = 140304

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   gtccgcctccaccgccggct 243
             ||||||||||||||||||||
Sbjct: 81938 gtccgcctccaccgccggct 81957
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>dbj|AP003417.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0498B01
          Length = 146812

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   gtccgcctccaccgccggct 243
             ||||||||||||||||||||
Sbjct: 20531 gtccgcctccaccgccggct 20550
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>dbj|AP006531.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1417F08
          Length = 155536

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 244   cctctcctccacctcgccgc 263
             ||||||||||||||||||||
Sbjct: 51736 cctctcctccacctcgccgc 51717
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>dbj|AP005742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0489D11
          Length = 150757

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 245    ctctcctccacctcgccgcc 264
              ||||||||||||||||||||
Sbjct: 128404 ctctcctccacctcgccgcc 128385
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>dbj|AP004730.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0009J19
          Length = 156988

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 224    gtccgcctccaccgccggct 243
              ||||||||||||||||||||
Sbjct: 155555 gtccgcctccaccgccggct 155536
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>dbj|AP004328.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1616_B03
          Length = 96081

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   gtccgcctccaccgccggct 243
             ||||||||||||||||||||
Sbjct: 60369 gtccgcctccaccgccggct 60350
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>dbj|AP005305.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0024C06
          Length = 177529

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 244   cctctcctccacctcgccgc 263
             ||||||||||||||||||||
Sbjct: 78448 cctctcctccacctcgccgc 78467
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>dbj|AP005843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBb0024C16
          Length = 137779

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 244   cctctcctccacctcgccgc 263
             ||||||||||||||||||||
Sbjct: 24087 cctctcctccacctcgccgc 24106
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>emb|BX004869.13| Zebrafish DNA sequence from clone CH211-69E21 in linkage group 17,
             complete sequence
          Length = 182325

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 235   ccgccggctcctctcctcca 254
             ||||||||||||||||||||
Sbjct: 27058 ccgccggctcctctcctcca 27077
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>dbj|AK074342.1| Homo sapiens cDNA FLJ23762 fis, clone HEP18324
          Length = 1501

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 99  cctgcttcctctgcccatcc 118
           ||||||||||||||||||||
Sbjct: 96  cctgcttcctctgcccatcc 77
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>dbj|AK111207.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-178-G02, full
            insert sequence
          Length = 2754

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 246  tctcctccacctcgccgccc 265
            ||||||||||||||||||||
Sbjct: 2429 tctcctccacctcgccgccc 2410
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>dbj|AK101819.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067E15, full
           insert sequence
          Length = 1653

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 341 gacgcacaccacatgttcgacgaattgtttcg 372
           ||||||| |||| |||||||||||||| ||||
Sbjct: 345 gacgcacgccacgtgttcgacgaattgcttcg 376
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>dbj|AK072042.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104I23, full
           insert sequence
          Length = 3225

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 185 ctccacctccgccactgctccacc 208
           ||||||| ||||||||||||||||
Sbjct: 57  ctccaccaccgccactgctccacc 34
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>gb|AF169627.1|AF169627 Oryctolagus cuniculus Galpha16 mRNA, complete cds
          Length = 1125

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 413 cttgccgctctcgcccgtgc 432
           ||||||||||||||||||||
Sbjct: 165 cttgccgctctcgcccgtgc 146
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>dbj|AK059574.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-A06, full
           insert sequence
          Length = 1584

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 341 gacgcacaccacatgttcgacgaattgtttcg 372
           ||||||| |||| |||||||||||||| ||||
Sbjct: 288 gacgcacgccacgtgttcgacgaattgcttcg 319
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>gb|AY105831.1| Zea mays PCO126824 mRNA sequence
          Length = 1463

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 246 tctcctccacctcgccgccc 265
           ||||||||||||||||||||
Sbjct: 229 tctcctccacctcgccgccc 210
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 341      gacgcacaccacatgttcgacgaattgtttcg 372
                ||||||| |||| |||||||||||||| ||||
Sbjct: 18319056 gacgcacgccacgtgttcgacgaattgcttcg 18319025



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 229      cctccaccgccggctcctctcctc 252
                ||||||||||||||||| ||||||
Sbjct: 18080140 cctccaccgccggctcccctcctc 18080117
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>emb|AL713951.4|CNS07YPU Oryza sativa chromosome 12, . BAC OJ1111_C09 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 165137

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 185   ctccacctccgccactgctccacc 208
             ||||||| ||||||||||||||||
Sbjct: 28315 ctccaccaccgccactgctccacc 28292
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>emb|AL928758.3|CNS08CBV Oryza sativa chromosome 12, . BAC OSJNBb0075N21 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 145539

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   gtccgcctccaccgccggct 243
             ||||||||||||||||||||
Sbjct: 25105 gtccgcctccaccgccggct 25086
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>dbj|AP006383.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT05I20, TM0245,
             complete sequence
          Length = 73179

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 297   ccgcggccacagagcgtgtgcgcg 320
             ||||||||| ||||||||||||||
Sbjct: 32110 ccgcggccaaagagcgtgtgcgcg 32133
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>gb|AY560732.1| Ciboneya antraia 28S ribosomal RNA gene, partial sequence
          Length = 1132

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 219 cccgcgtccgcctccaccgc 238
           ||||||||||||||||||||
Sbjct: 419 cccgcgtccgcctccaccgc 400


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,442,545
Number of Sequences: 3902068
Number of extensions: 3442545
Number of successful extensions: 78165
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76438
Number of HSP's gapped (non-prelim): 1727
length of query: 462
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 440
effective length of database: 17,147,199,772
effective search space: 7544767899680
effective search space used: 7544767899680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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