ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl44h04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK120068.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002N11, full insert sequence Length = 2975 Score = 335 bits (169), Expect = 7e-89 Identities = 328/381 (86%) Strand = Plus / Plus Query: 60 cccgccgacaatggcggagtcgccggagcagttcaggggccagtcccgcctcccccgatt 119 ||||||| |||||||| ||||||||||||||| |||||||| | || ||||| || | Sbjct: 90 cccgccgcaaatggcggcctcgccggagcagttccggggccaggcgcggctcccgcggtg 149 Query: 120 cgccgagcccctacgctacgacctcgtcctccgccccgacctcgcggcctgcaccttctc 179 |||| || || ||||||||||| |||||||||||||||||| |||||| ||||||| Sbjct: 150 cgcctccccgctcagctacgacctccgcctccgccccgacctcgccgcctgcgccttctc 209 Query: 180 cggctccgcgtcggccgccgtcgccgtgtccgcgcccacccgcttcctcgtcctcaacgc 239 ||||||||| | | |||||||||||| ||||| || ||||| ||||||||||||||||| Sbjct: 210 cggctccgccgccgtcgccgtcgccgtctccgccccgacccgattcctcgtcctcaacgc 269 Query: 240 cgccgagctcgccgtcgaccggtcctccatccgcttccaggactgggcgccgacggaggt 299 ||||||||||||||||||| | |||||| ||||||||||||| | || ||| | ||||| Sbjct: 270 cgccgagctcgccgtcgacggatcctccgtccgcttccaggatttggtgccttccgaggt 329 Query: 300 ggtgcagttcgaggaggatgagatcctcgtcctcgggttcggccgggagcggcccctcgg 359 |||||||||||||||||| |||||| | ||| |||||||||||| ||| | ||| |||| Sbjct: 330 ggtgcagttcgaggaggacgagatcgtggtcatcgggttcggccaggatctgccgatcgg 389 Query: 360 cgagggcgtgctcgccatggacttcaccggcaccctcaacgatcagatgaggggcttcta 419 ||||||||||||| |||||||||||||| || ||||||||||||||||| |||||||| Sbjct: 390 cgagggcgtgctcaagatggacttcaccgggacgctcaacgatcagatgagaggcttcta 449 Query: 420 caggagcaagtatgagtacaa 440 ||||||||||||||||||||| Sbjct: 450 caggagcaagtatgagtacaa 470
>ref|XM_450614.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2984 Score = 246 bits (124), Expect = 5e-62 Identities = 193/216 (89%) Strand = Plus / Plus Query: 198 cgtcgccgtgtccgcgcccacccgcttcctcgtcctcaacgccgccgagctcgccgtcga 257 ||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 124 cgtcgacgtctccgcgcccacccgcttcctcgtcctcaacgccgccgacctcgccgtcga 183 Query: 258 ccggtcctccatccgcttccaggactgggcgccgacggaggtggtgcagttcgaggagga 317 ||| |||||||||||||||||| | |||||||||||||||| || ||||||||| || Sbjct: 184 ccgcgcctccatccgcttccaggggttggcgccgacggaggtgtcgctgttcgaggacga 243 Query: 318 tgagatcctcgtcctcgggttcggccgggagcggcccctcggcgagggcgtgctcgccat 377 |||||||| || || | ||||| | |||||| ||| ||||||||||||||||||||||| Sbjct: 244 cgagatcctggtgctggagttcgacggggagctgccgctcggcgagggcgtgctcgccat 303 Query: 378 ggacttcaccggcaccctcaacgatcagatgagggg 413 |||||||| |||||| |||||||||||||||||||| Sbjct: 304 ggacttcaacggcacgctcaacgatcagatgagggg 339
>dbj|AK068165.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134N07, full insert sequence Length = 2985 Score = 246 bits (124), Expect = 5e-62 Identities = 193/216 (89%) Strand = Plus / Plus Query: 198 cgtcgccgtgtccgcgcccacccgcttcctcgtcctcaacgccgccgagctcgccgtcga 257 ||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 125 cgtcgacgtctccgcgcccacccgcttcctcgtcctcaacgccgccgacctcgccgtcga 184 Query: 258 ccggtcctccatccgcttccaggactgggcgccgacggaggtggtgcagttcgaggagga 317 ||| |||||||||||||||||| | |||||||||||||||| || ||||||||| || Sbjct: 185 ccgcgcctccatccgcttccaggggttggcgccgacggaggtgtcgctgttcgaggacga 244 Query: 318 tgagatcctcgtcctcgggttcggccgggagcggcccctcggcgagggcgtgctcgccat 377 |||||||| || || | ||||| | |||||| ||| ||||||||||||||||||||||| Sbjct: 245 cgagatcctggtgctggagttcgacggggagctgccgctcggcgagggcgtgctcgccat 304 Query: 378 ggacttcaccggcaccctcaacgatcagatgagggg 413 |||||||| |||||| |||||||||||||||||||| Sbjct: 305 ggacttcaacggcacgctcaacgatcagatgagggg 340
>ref|XM_450615.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2622 Score = 240 bits (121), Expect = 3e-60 Identities = 214/245 (87%) Strand = Plus / Plus Query: 196 gccgtcgccgtgtccgcgcccacccgcttcctcgtcctcaacgccgccgagctcgccgtc 255 ||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 127 gccgtcgacgtctccgcgcccacccgcttcctcgtcctcaacgccgccgacctcgccgtc 186 Query: 256 gaccggtcctccatccgcttccaggactgggcgccgacggaggtggtgcagttcgaggag 315 ||||| |||||||||||||||||| || ||||||| |||||||| | |||||||||| Sbjct: 187 gaccgcgcctccatccgcttccagggcttggcgccggcggaggtgtcggtgttcgaggag 246 Query: 316 gatgagatcctcgtcctcgggttcggccgggagcggcccctcggcgagggcgtgctcgcc 375 || |||||||| || || | ||||| | |||||| ||| ||||||||||||||||||||| Sbjct: 247 gacgagatcctggtgctggagttcgccggggagctgccgctcggcgagggcgtgctcgcc 306 Query: 376 atggacttcaccggcaccctcaacgatcagatgaggggcttctacaggagcaagtatgag 435 ||| |||| |||||| |||||||||||||||||||| |||||||| || || ||||| Sbjct: 307 atgaggttcaacggcacgctcaacgatcagatgaggggattctacagaagtaaatatgaa 366 Query: 436 tacaa 440 ||||| Sbjct: 367 tacaa 371
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 184 bits (93), Expect = 2e-43 Identities = 189/221 (85%) Strand = Plus / Plus Query: 60 cccgccgacaatggcggagtcgccggagcagttcaggggccagtcccgcctcccccgatt 119 ||||||| |||||||| ||||||||||||||| |||||||| | || ||||| || | Sbjct: 19014664 cccgccgcaaatggcggcctcgccggagcagttccggggccaggcgcggctcccgcggtg 19014723 Query: 120 cgccgagcccctacgctacgacctcgtcctccgccccgacctcgcggcctgcaccttctc 179 |||| || || ||||||||||| |||||||||||||||||| |||||| ||||||| Sbjct: 19014724 cgcctccccgctcagctacgacctccgcctccgccccgacctcgccgcctgcgccttctc 19014783 Query: 180 cggctccgcgtcggccgccgtcgccgtgtccgcgcccacccgcttcctcgtcctcaacgc 239 ||||||||| | | |||||||||||| ||||| || ||||| ||||||||||||||||| Sbjct: 19014784 cggctccgccgccgtcgccgtcgccgtctccgccccgacccgattcctcgtcctcaacgc 19014843 Query: 240 cgccgagctcgccgtcgaccggtcctccatccgcttccagg 280 ||||||||||||||||||| | |||||| |||||||||||| Sbjct: 19014844 cgccgagctcgccgtcgacggatcctccgtccgcttccagg 19014884 Score = 141 bits (71), Expect = 2e-30 Identities = 116/131 (88%) Strand = Plus / Plus Query: 295 gaggtggtgcagttcgaggaggatgagatcctcgtcctcgggttcggccgggagcggccc 354 ||||||||||||||||||||||| |||||| | ||| |||||||||||| ||| | ||| Sbjct: 19015002 gaggtggtgcagttcgaggaggacgagatcgtggtcatcgggttcggccaggatctgccg 19015061 Query: 355 ctcggcgagggcgtgctcgccatggacttcaccggcaccctcaacgatcagatgaggggc 414 ||||||||||||||||| |||||||||||||| || ||||||||||||||||| ||| Sbjct: 19015062 atcggcgagggcgtgctcaagatggacttcaccgggacgctcaacgatcagatgagaggc 19015121 Query: 415 ttctacaggag 425 ||||||||||| Sbjct: 19015122 ttctacaggag 19015132
>dbj|AP003947.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1198_B10 Length = 119768 Score = 184 bits (93), Expect = 2e-43 Identities = 189/221 (85%) Strand = Plus / Plus Query: 60 cccgccgacaatggcggagtcgccggagcagttcaggggccagtcccgcctcccccgatt 119 ||||||| |||||||| ||||||||||||||| |||||||| | || ||||| || | Sbjct: 99584 cccgccgcaaatggcggcctcgccggagcagttccggggccaggcgcggctcccgcggtg 99643 Query: 120 cgccgagcccctacgctacgacctcgtcctccgccccgacctcgcggcctgcaccttctc 179 |||| || || ||||||||||| |||||||||||||||||| |||||| ||||||| Sbjct: 99644 cgcctccccgctcagctacgacctccgcctccgccccgacctcgccgcctgcgccttctc 99703 Query: 180 cggctccgcgtcggccgccgtcgccgtgtccgcgcccacccgcttcctcgtcctcaacgc 239 ||||||||| | | |||||||||||| ||||| || ||||| ||||||||||||||||| Sbjct: 99704 cggctccgccgccgtcgccgtcgccgtctccgccccgacccgattcctcgtcctcaacgc 99763 Query: 240 cgccgagctcgccgtcgaccggtcctccatccgcttccagg 280 ||||||||||||||||||| | |||||| |||||||||||| Sbjct: 99764 cgccgagctcgccgtcgacggatcctccgtccgcttccagg 99804 Score = 141 bits (71), Expect = 2e-30 Identities = 116/131 (88%) Strand = Plus / Plus Query: 295 gaggtggtgcagttcgaggaggatgagatcctcgtcctcgggttcggccgggagcggccc 354 ||||||||||||||||||||||| |||||| | ||| |||||||||||| ||| | ||| Sbjct: 99922 gaggtggtgcagttcgaggaggacgagatcgtggtcatcgggttcggccaggatctgccg 99981 Query: 355 ctcggcgagggcgtgctcgccatggacttcaccggcaccctcaacgatcagatgaggggc 414 ||||||||||||||||| |||||||||||||| || ||||||||||||||||| ||| Sbjct: 99982 atcggcgagggcgtgctcaagatggacttcaccgggacgctcaacgatcagatgagaggc 100041 Query: 415 ttctacaggag 425 ||||||||||| Sbjct: 100042 ttctacaggag 100052
>dbj|AP003904.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1051_A08 Length = 137583 Score = 184 bits (93), Expect = 2e-43 Identities = 189/221 (85%) Strand = Plus / Plus Query: 60 cccgccgacaatggcggagtcgccggagcagttcaggggccagtcccgcctcccccgatt 119 ||||||| |||||||| ||||||||||||||| |||||||| | || ||||| || | Sbjct: 39451 cccgccgcaaatggcggcctcgccggagcagttccggggccaggcgcggctcccgcggtg 39510 Query: 120 cgccgagcccctacgctacgacctcgtcctccgccccgacctcgcggcctgcaccttctc 179 |||| || || ||||||||||| |||||||||||||||||| |||||| ||||||| Sbjct: 39511 cgcctccccgctcagctacgacctccgcctccgccccgacctcgccgcctgcgccttctc 39570 Query: 180 cggctccgcgtcggccgccgtcgccgtgtccgcgcccacccgcttcctcgtcctcaacgc 239 ||||||||| | | |||||||||||| ||||| || ||||| ||||||||||||||||| Sbjct: 39571 cggctccgccgccgtcgccgtcgccgtctccgccccgacccgattcctcgtcctcaacgc 39630 Query: 240 cgccgagctcgccgtcgaccggtcctccatccgcttccagg 280 ||||||||||||||||||| | |||||| |||||||||||| Sbjct: 39631 cgccgagctcgccgtcgacggatcctccgtccgcttccagg 39671 Score = 141 bits (71), Expect = 2e-30 Identities = 116/131 (88%) Strand = Plus / Plus Query: 295 gaggtggtgcagttcgaggaggatgagatcctcgtcctcgggttcggccgggagcggccc 354 ||||||||||||||||||||||| |||||| | ||| |||||||||||| ||| | ||| Sbjct: 39789 gaggtggtgcagttcgaggaggacgagatcgtggtcatcgggttcggccaggatctgccg 39848 Query: 355 ctcggcgagggcgtgctcgccatggacttcaccggcaccctcaacgatcagatgaggggc 414 ||||||||||||||||| |||||||||||||| || ||||||||||||||||| ||| Sbjct: 39849 atcggcgagggcgtgctcaagatggacttcaccgggacgctcaacgatcagatgagaggc 39908 Query: 415 ttctacaggag 425 ||||||||||| Sbjct: 39909 ttctacaggag 39919
>ref|XM_482249.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2685 Score = 180 bits (91), Expect = 3e-42 Identities = 181/211 (85%) Strand = Plus / Plus Query: 70 atggcggagtcgccggagcagttcaggggccagtcccgcctcccccgattcgccgagccc 129 ||||||| ||||||||||||||| |||||||| | || ||||| || | |||| || Sbjct: 1 atggcggcctcgccggagcagttccggggccaggcgcggctcccgcggtgcgcctccccg 60 Query: 130 ctacgctacgacctcgtcctccgccccgacctcgcggcctgcaccttctccggctccgcg 189 || ||||||||||| |||||||||||||||||| |||||| |||||||||||||||| Sbjct: 61 ctcagctacgacctccgcctccgccccgacctcgccgcctgcgccttctccggctccgcc 120 Query: 190 tcggccgccgtcgccgtgtccgcgcccacccgcttcctcgtcctcaacgccgccgagctc 249 | | |||||||||||| ||||| || ||||| ||||||||||||||||||||||||||| Sbjct: 121 gccgtcgccgtcgccgtctccgccccgacccgattcctcgtcctcaacgccgccgagctc 180 Query: 250 gccgtcgaccggtcctccatccgcttccagg 280 ||||||||| | |||||| |||||||||||| Sbjct: 181 gccgtcgacggatcctccgtccgcttccagg 211 Score = 141 bits (71), Expect = 2e-30 Identities = 116/131 (88%) Strand = Plus / Plus Query: 295 gaggtggtgcagttcgaggaggatgagatcctcgtcctcgggttcggccgggagcggccc 354 ||||||||||||||||||||||| |||||| | ||| |||||||||||| ||| | ||| Sbjct: 248 gaggtggtgcagttcgaggaggacgagatcgtggtcatcgggttcggccaggatctgccg 307 Query: 355 ctcggcgagggcgtgctcgccatggacttcaccggcaccctcaacgatcagatgaggggc 414 ||||||||||||||||| |||||||||||||| || ||||||||||||||||| ||| Sbjct: 308 atcggcgagggcgtgctcaagatggacttcaccgggacgctcaacgatcagatgagaggc 367 Query: 415 ttctacaggag 425 ||||||||||| Sbjct: 368 ttctacaggag 378
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 137 bits (69), Expect = 3e-29 Identities = 114/129 (88%) Strand = Plus / Plus Query: 285 ggcgccgacggaggtggtgcagttcgaggaggatgagatcctcgtcctcgggttcggccg 344 |||||||||||||||| || ||||||||| || |||||||| || || | ||||| | | Sbjct: 11790402 ggcgccgacggaggtgtcgctgttcgaggacgacgagatcctggtgctggagttcgacgg 11790461 Query: 345 ggagcggcccctcggcgagggcgtgctcgccatggacttcaccggcaccctcaacgatca 404 ||||| ||| ||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 11790462 ggagctgccgctcggcgagggcgtgctcgccatggacttcaacggcacgctcaacgatca 11790521 Query: 405 gatgagggg 413 ||||||||| Sbjct: 11790522 gatgagggg 11790530 Score = 129 bits (65), Expect = 8e-27 Identities = 80/85 (94%) Strand = Plus / Plus Query: 196 gccgtcgccgtgtccgcgcccacccgcttcctcgtcctcaacgccgccgagctcgccgtc 255 ||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 11799403 gccgtcgacgtctccgcgcccacccgcttcctcgtcctcaacgccgccgacctcgccgtc 11799462 Query: 256 gaccggtcctccatccgcttccagg 280 ||||| |||||||||||||||||| Sbjct: 11799463 gaccgcgcctccatccgcttccagg 11799487 Score = 125 bits (63), Expect = 1e-25 Identities = 78/83 (93%) Strand = Plus / Plus Query: 198 cgtcgccgtgtccgcgcccacccgcttcctcgtcctcaacgccgccgagctcgccgtcga 257 ||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 11790221 cgtcgacgtctccgcgcccacccgcttcctcgtcctcaacgccgccgacctcgccgtcga 11790280 Query: 258 ccggtcctccatccgcttccagg 280 ||| |||||||||||||||||| Sbjct: 11790281 ccgcgcctccatccgcttccagg 11790303 Score = 115 bits (58), Expect = 1e-22 Identities = 118/138 (85%) Strand = Plus / Plus Query: 285 ggcgccgacggaggtggtgcagttcgaggaggatgagatcctcgtcctcgggttcggccg 344 ||||||| |||||||| | |||||||||||| |||||||| || || | ||||| | | Sbjct: 11799570 ggcgccggcggaggtgtcggtgttcgaggaggacgagatcctggtgctggagttcgccgg 11799629 Query: 345 ggagcggcccctcggcgagggcgtgctcgccatggacttcaccggcaccctcaacgatca 404 ||||| ||| |||||||||||||||||||||||| |||| |||||| ||||||||||| Sbjct: 11799630 ggagctgccgctcggcgagggcgtgctcgccatgaggttcaacggcacgctcaacgatca 11799689 Query: 405 gatgaggggcttctacag 422 ||||||||| |||||||| Sbjct: 11799690 gatgaggggattctacag 11799707 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgagctcgccgtcg 256 |||||||||||||||||||| Sbjct: 18959982 cgccgccgagctcgccgtcg 18960001
>dbj|AP005572.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1506_A04 Length = 114998 Score = 137 bits (69), Expect = 3e-29 Identities = 114/129 (88%) Strand = Plus / Plus Query: 285 ggcgccgacggaggtggtgcagttcgaggaggatgagatcctcgtcctcgggttcggccg 344 |||||||||||||||| || ||||||||| || |||||||| || || | ||||| | | Sbjct: 33220 ggcgccgacggaggtgtcgctgttcgaggacgacgagatcctggtgctggagttcgacgg 33279 Query: 345 ggagcggcccctcggcgagggcgtgctcgccatggacttcaccggcaccctcaacgatca 404 ||||| ||| ||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 33280 ggagctgccgctcggcgagggcgtgctcgccatggacttcaacggcacgctcaacgatca 33339 Query: 405 gatgagggg 413 ||||||||| Sbjct: 33340 gatgagggg 33348 Score = 129 bits (65), Expect = 8e-27 Identities = 80/85 (94%) Strand = Plus / Plus Query: 196 gccgtcgccgtgtccgcgcccacccgcttcctcgtcctcaacgccgccgagctcgccgtc 255 ||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 42221 gccgtcgacgtctccgcgcccacccgcttcctcgtcctcaacgccgccgacctcgccgtc 42280 Query: 256 gaccggtcctccatccgcttccagg 280 ||||| |||||||||||||||||| Sbjct: 42281 gaccgcgcctccatccgcttccagg 42305 Score = 125 bits (63), Expect = 1e-25 Identities = 78/83 (93%) Strand = Plus / Plus Query: 198 cgtcgccgtgtccgcgcccacccgcttcctcgtcctcaacgccgccgagctcgccgtcga 257 ||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 33039 cgtcgacgtctccgcgcccacccgcttcctcgtcctcaacgccgccgacctcgccgtcga 33098 Query: 258 ccggtcctccatccgcttccagg 280 ||| |||||||||||||||||| Sbjct: 33099 ccgcgcctccatccgcttccagg 33121 Score = 115 bits (58), Expect = 1e-22 Identities = 118/138 (85%) Strand = Plus / Plus Query: 285 ggcgccgacggaggtggtgcagttcgaggaggatgagatcctcgtcctcgggttcggccg 344 ||||||| |||||||| | |||||||||||| |||||||| || || | ||||| | | Sbjct: 42388 ggcgccggcggaggtgtcggtgttcgaggaggacgagatcctggtgctggagttcgccgg 42447 Query: 345 ggagcggcccctcggcgagggcgtgctcgccatggacttcaccggcaccctcaacgatca 404 ||||| ||| |||||||||||||||||||||||| |||| |||||| ||||||||||| Sbjct: 42448 ggagctgccgctcggcgagggcgtgctcgccatgaggttcaacggcacgctcaacgatca 42507 Query: 405 gatgaggggcttctacag 422 ||||||||| |||||||| Sbjct: 42508 gatgaggggattctacag 42525
>ref|XM_464667.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3020 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 211 gcgcccacccgcttcctcgtcctcaacgccgccgagctcg 250 ||||||||| | |||||||| ||||||||||||||||||| Sbjct: 256 gcgcccaccaggttcctcgtgctcaacgccgccgagctcg 295 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cggagcagttcaggggccag 102 |||||||||||||||||||| Sbjct: 128 cggagcagttcaggggccag 147
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 211 gcgcccacccgcttcctcgtcctcaacgccgccgagctcg 250 ||||||||| | |||||||| ||||||||||||||||||| Sbjct: 6598577 gcgcccaccaggttcctcgtgctcaacgccgccgagctcg 6598616 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 ccgcgtcggccgccgtcgccg 205 ||||||||||||||||||||| Sbjct: 33365600 ccgcgtcggccgccgtcgccg 33365620 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 cgccgccgagctcgccgtcga 257 ||||||||||||||||||||| Sbjct: 4966777 cgccgccgagctcgccgtcga 4966757 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 141 cctcgtcctccgccccgacctcgc 164 |||| ||||||||||||||||||| Sbjct: 22935054 cctcctcctccgccccgacctcgc 22935031 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cggagcagttcaggggccag 102 |||||||||||||||||||| Sbjct: 6598449 cggagcagttcaggggccag 6598468
>dbj|AP004996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0027A02 Length = 140402 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 211 gcgcccacccgcttcctcgtcctcaacgccgccgagctcg 250 ||||||||| | |||||||| ||||||||||||||||||| Sbjct: 32952 gcgcccaccaggttcctcgtgctcaacgccgccgagctcg 32991 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cggagcagttcaggggccag 102 |||||||||||||||||||| Sbjct: 32824 cggagcagttcaggggccag 32843
>dbj|AK066996.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089H24, full insert sequence Length = 3020 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 211 gcgcccacccgcttcctcgtcctcaacgccgccgagctcg 250 ||||||||| | |||||||| ||||||||||||||||||| Sbjct: 256 gcgcccaccaggttcctcgtgctcaacgccgccgagctcg 295 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cggagcagttcaggggccag 102 |||||||||||||||||||| Sbjct: 128 cggagcagttcaggggccag 147
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 339 cggccgggagcggcccctcggcgag 363 ||||||||||||||||||||||||| Sbjct: 2085731 cggccgggagcggcccctcggcgag 2085755
>gb|AC010564.7| Drosophila melanogaster 3L BAC RP98-27O1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 196594 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 404 agatgaggggcttctacaggagcaagta 431 |||||| ||||||||||||||||||||| Sbjct: 164492 agatgaagggcttctacaggagcaagta 164519
>ref|NM_167887.1| Drosophila melanogaster Puromycin sensitive aminopeptidase CG1009-RF, transcript variant F (Psa), mRNA Length = 3717 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 404 agatgaggggcttctacaggagcaagta 431 |||||| ||||||||||||||||||||| Sbjct: 987 agatgaagggcttctacaggagcaagta 1014
>ref|NM_167886.1| Drosophila melanogaster Puromycin sensitive aminopeptidase CG1009-RD, transcript variant D (Psa), mRNA Length = 3698 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 404 agatgaggggcttctacaggagcaagta 431 |||||| ||||||||||||||||||||| Sbjct: 968 agatgaagggcttctacaggagcaagta 995
>ref|NM_167885.1| Drosophila melanogaster Puromycin sensitive aminopeptidase CG1009-RA, transcript variant A (Psa), mRNA Length = 3930 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 404 agatgaggggcttctacaggagcaagta 431 |||||| ||||||||||||||||||||| Sbjct: 1200 agatgaagggcttctacaggagcaagta 1227
>ref|NM_167884.1| Drosophila melanogaster Puromycin sensitive aminopeptidase CG1009-RE, transcript variant E (Psa), mRNA Length = 3729 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 404 agatgaggggcttctacaggagcaagta 431 |||||| ||||||||||||||||||||| Sbjct: 999 agatgaagggcttctacaggagcaagta 1026
>ref|NM_167883.1| Drosophila melanogaster Puromycin sensitive aminopeptidase CG1009-RC, transcript variant C (Psa), mRNA Length = 3795 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 404 agatgaggggcttctacaggagcaagta 431 |||||| ||||||||||||||||||||| Sbjct: 1065 agatgaagggcttctacaggagcaagta 1092
>ref|NM_139360.2| Drosophila melanogaster Puromycin sensitive aminopeptidase CG1009-RB, transcript variant B (Psa), mRNA Length = 4023 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 404 agatgaggggcttctacaggagcaagta 431 |||||| ||||||||||||||||||||| Sbjct: 1293 agatgaagggcttctacaggagcaagta 1320
>gb|AE003471.3| Drosophila melanogaster chromosome 3L, section 5 of 83 of the complete sequence Length = 302131 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 404 agatgaggggcttctacaggagcaagta 431 |||||| ||||||||||||||||||||| Sbjct: 287528 agatgaagggcttctacaggagcaagta 287555
>gb|AC004333.1|AC004333 Drosophila melanogaster DNA sequence (P1 DS05969 (D229)), complete sequence Length = 63178 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Minus Query: 404 agatgaggggcttctacaggagcaagta 431 |||||| ||||||||||||||||||||| Sbjct: 47697 agatgaagggcttctacaggagcaagta 47670
>ref|XM_473844.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2910 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 237 cgccgccgagctcgccgtcgac 258 |||||||||||||||||||||| Sbjct: 309 cgccgccgagctcgccgtcgac 330
>emb|AL606684.3|OSJN00088 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0085I10, complete sequence Length = 150551 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 237 cgccgccgagctcgccgtcgac 258 |||||||||||||||||||||| Sbjct: 50238 cgccgccgagctcgccgtcgac 50217
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 237 cgccgccgagctcgccgtcgac 258 |||||||||||||||||||||| Sbjct: 35300808 cgccgccgagctcgccgtcgac 35300787 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 237 cgccgccgagctcgccgtcgac 258 |||||||||||||||||||||| Sbjct: 30952866 cgccgccgagctcgccgtcgac 30952845
>emb|AL442105.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0702G05, complete sequence Length = 134586 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 237 cgccgccgagctcgccgtcgac 258 |||||||||||||||||||||| Sbjct: 129870 cgccgccgagctcgccgtcgac 129849
>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24, complete sequence Length = 173770 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 237 cgccgccgagctcgccgtcgac 258 |||||||||||||||||||||| Sbjct: 96653 cgccgccgagctcgccgtcgac 96632
>ref|XM_468154.1| Oryza sativa (japonica cultivar-group), mRNA Length = 924 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 185 ccgcgtcggccgccgtcgccg 205 ||||||||||||||||||||| Sbjct: 151 ccgcgtcggccgccgtcgccg 131
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 gcaccctcaacgatcagatga 409 ||||||||||||||||||||| Sbjct: 49925 gcaccctcaacgatcagatga 49905
>gb|AC135423.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0015C02, complete sequence Length = 147407 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 164 cggcctgcaccttctccggctccgc 188 ||||||||||||||||| ||||||| Sbjct: 26988 cggcctgcaccttctcccgctccgc 27012
>gb|AC121364.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0052E20, complete sequence Length = 162434 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 164 cggcctgcaccttctccggctccgc 188 ||||||||||||||||| ||||||| Sbjct: 68521 cggcctgcaccttctcccgctccgc 68545
>emb|AL450468.6| Human DNA sequence from clone RP11-195M16 on chromosome 1 Contains the 3' end of a novel gene, a novel gene and the CSF1 gene for colony stimulating factor 1 (macrophage), complete sequence Length = 116796 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 339 cggccgggagcggcccctcgg 359 ||||||||||||||||||||| Sbjct: 67687 cggccgggagcggcccctcgg 67707
>gb|AC104082.3| Homo sapiens BAC clone RP11-570L13 from 4, complete sequence Length = 182770 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 gaagctactgtgttcagaaaa 22 ||||||||||||||||||||| Sbjct: 21600 gaagctactgtgttcagaaaa 21620
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 164 cggcctgcaccttctccggctccgc 188 ||||||||||||||||| ||||||| Sbjct: 22964508 cggcctgcaccttctcccgctccgc 22964532 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgagctcgccgtcg 256 |||||||||||||||||||| Sbjct: 22308796 cgccgccgagctcgccgtcg 22308815
>gb|AE009623.1| Brucella melitensis 16M chromosome I, section 180 of 195 of the complete sequence Length = 10029 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 389 gcaccctcaacgatcagatga 409 ||||||||||||||||||||| Sbjct: 4222 gcaccctcaacgatcagatga 4242
>dbj|AP005849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0031B09 Length = 132729 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 cgccgccgagctcgccgtcga 257 ||||||||||||||||||||| Sbjct: 37903 cgccgccgagctcgccgtcga 37883
>dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1145_F01 Length = 113755 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 cgccgccgagctcgccgtcga 257 ||||||||||||||||||||| Sbjct: 111516 cgccgccgagctcgccgtcga 111496
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 gcaccctcaacgatcagatga 409 ||||||||||||||||||||| Sbjct: 49786 gcaccctcaacgatcagatga 49766
>dbj|AP004095.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1715_H01 Length = 138733 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 ccgcgtcggccgccgtcgccg 205 ||||||||||||||||||||| Sbjct: 106350 ccgcgtcggccgccgtcgccg 106370
>dbj|AK069780.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028F19, full insert sequence Length = 3290 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 164 cggcctgcaccttctccggctccgc 188 ||||||||||||||||| ||||||| Sbjct: 212 cggcctgcaccttctcccgctccgc 188
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 tcctcgtcctcaacgccgccg 244 ||||||||||||||||||||| Sbjct: 2668988 tcctcgtcctcaacgccgccg 2668968
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 gcaccctcaacgatcagatga 409 ||||||||||||||||||||| Sbjct: 46187 gcaccctcaacgatcagatga 46167
>gb|AC168019.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940127D9, complete sequence Length = 102832 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 237 cgccgccgagctcgccgtcga 257 ||||||||||||||||||||| Sbjct: 3247 cgccgccgagctcgccgtcga 3267
>ref|XM_466490.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1768 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 cctcgtcctccgccccgacctcgc 164 |||| ||||||||||||||||||| Sbjct: 6 cctcctcctccgccccgacctcgc 29
>ref|NM_191023.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 891 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgagctcgccgtcg 256 |||||||||||||||||||| Sbjct: 795 cgccgccgagctcgccgtcg 776
>gb|AC099404.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0019D02, complete sequence Length = 154692 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgagctcgccgtcg 256 |||||||||||||||||||| Sbjct: 5244 cgccgccgagctcgccgtcg 5263
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 cctcggcgagggcgtgctcg 373 |||||||||||||||||||| Sbjct: 2109068 cctcggcgagggcgtgctcg 2109049
>gb|AC105770.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_D02, complete sequence Length = 131860 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgagctcgccgtcg 256 |||||||||||||||||||| Sbjct: 10431 cgccgccgagctcgccgtcg 10450
>gb|AC151537.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0087D01, complete sequence Length = 83225 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgagctcgccgtcg 256 |||||||||||||||||||| Sbjct: 27684 cgccgccgagctcgccgtcg 27703
>gb|AC151407.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0073M15, complete sequence Length = 143071 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgagctcgccgtcg 256 |||||||||||||||||||| Sbjct: 106583 cgccgccgagctcgccgtcg 106602
>gb|BT015180.1| Drosophila melanogaster SD10789 full insert cDNA Length = 4056 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 404 agatgaggggcttctacaggagcaagta 431 |||||| ||| ||||||||||||||||| Sbjct: 910 agatgaagggattctacaggagcaagta 937
>gb|AY639147.1| Stizostedion vitreum vitreum genomic sequence Length = 10284 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 238 gccgccgagctcgccgtcgaccgg 261 ||||||||||||||||||| |||| Sbjct: 8272 gccgccgagctcgccgtcggccgg 8249
>emb|CT025236.2| Xenopus tropicalis finished cDNA, clone TEgg001e05 Length = 659 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 tccgcttccaggactgggcg 288 |||||||||||||||||||| Sbjct: 402 tccgcttccaggactgggcg 421
>gb|AC164570.3| Mus musculus BAC clone CH25-194I22 from chromosome 5, complete sequence Length = 103796 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 407 tgaggggcttctacaggagcaagtatga 434 ||||||| | |||||||||||||||||| Sbjct: 53961 tgaggggttactacaggagcaagtatga 53934
>gb|AC166568.2| Spironucleus vortens clone JGIBAWF-9N8, complete sequence Length = 38345 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 tcctcaacgccgccgagctcgccg 253 |||||| ||||||||||||||||| Sbjct: 23810 tcctcaccgccgccgagctcgccg 23833
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 370 ctcgccatggacttcaccggcacc 393 |||||||||| ||||||||||||| Sbjct: 68659 ctcgccatgggcttcaccggcacc 68636
>emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207F1 complete genome Length = 124321 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgagctcgccgtcg 256 |||||||||||||||||||| Sbjct: 60972 cgccgccgagctcgccgtcg 60991
>gb|AF327435.1|AF327435 Drosophila melanogaster puromycin-sensitive aminopeptidase mRNA, complete cds Length = 3656 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 404 agatgaggggcttctacaggagcaagta 431 |||||| ||| ||||||||||||||||| Sbjct: 915 agatgaaggggttctacaggagcaagta 942
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 191 cggccgccgtcgccgtgtccgcgc 214 ||||||||||||||||| |||||| Sbjct: 507228 cggccgccgtcgccgtggccgcgc 507205
>gb|AC159612.1| Zea mays chromosome 5S clone ZMMBBb0511I12 map bin: 5.00, complete sequence Length = 50000 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 348 gcggcccctcggcgagggcgtgctcgcc 375 |||||| ||||||| ||||||||||||| Sbjct: 31888 gcggccgctcggcgtgggcgtgctcgcc 31861
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 gcggcccctcggcgagggcgtgct 371 |||||||||||||| ||||||||| Sbjct: 36767 gcggcccctcggcgggggcgtgct 36744
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gccgccgagctcgccgtcga 257 |||||||||||||||||||| Sbjct: 14154294 gccgccgagctcgccgtcga 14154275 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgagctcgccgtcg 256 |||||||||||||||||||| Sbjct: 4922019 cgccgccgagctcgccgtcg 4922038
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cggagcagttcaggggccag 102 |||||||||||||||||||| Sbjct: 12319113 cggagcagttcaggggccag 12319094
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgagctcgccgtcg 256 |||||||||||||||||||| Sbjct: 34362544 cgccgccgagctcgccgtcg 34362525
>gb|AY741536.1| Pennisetum glaucum TEL1 gene, partial sequence Length = 3162 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgagctcgccgtcg 256 |||||||||||||||||||| Sbjct: 305 cgccgccgagctcgccgtcg 324
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 gctccgcgtcggccgccgtc 201 |||||||||||||||||||| Sbjct: 3883160 gctccgcgtcggccgccgtc 3883179
>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0468B07 Length = 169071 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgagctcgccgtcg 256 |||||||||||||||||||| Sbjct: 44888 cgccgccgagctcgccgtcg 44869
>dbj|AP003511.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0578B12 Length = 151192 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cggagcagttcaggggccag 102 |||||||||||||||||||| Sbjct: 35573 cggagcagttcaggggccag 35554
>dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0016G10 Length = 143211 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 141 cctcgtcctccgccccgacctcgc 164 |||| ||||||||||||||||||| Sbjct: 54856 cctcctcctccgccccgacctcgc 54833
>emb|AL713953.3|CNS07YPY Oryza sativa chromosome 12, . BAC OJ1134_A05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 120825 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgagctcgccgtcg 256 |||||||||||||||||||| Sbjct: 16403 cgccgccgagctcgccgtcg 16384
>dbj|AK069742.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030E07, full insert sequence Length = 1764 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 cctcgtcctccgccccgacctcgc 164 |||| ||||||||||||||||||| Sbjct: 6 cctcctcctccgccccgacctcgc 29
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 ggagcggcccctcggcgagg 364 |||||||||||||||||||| Sbjct: 4139436 ggagcggcccctcggcgagg 4139455
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gccgccgagctcgccgtcga 257 |||||||||||||||||||| Sbjct: 14108574 gccgccgagctcgccgtcga 14108555 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 cgccgccgagctcgccgtcg 256 |||||||||||||||||||| Sbjct: 4922001 cgccgccgagctcgccgtcg 4922020
>emb|AL732644.3|CNS08C9J Oryza sativa chromosome 12, . BAC OSJNBa0016A01 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 150703 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gccgccgagctcgccgtcga 257 |||||||||||||||||||| Sbjct: 80835 gccgccgagctcgccgtcga 80816
>emb|BX536967.2|CNS09SBH Oryza sativa chromosome 12, . BAC OSJNBa0029N15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141053 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 cgccgccgagctcgccgtcg 256 |||||||||||||||||||| Sbjct: 37940 cgccgccgagctcgccgtcg 37921
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 gagggcgtgctcgccatgga 380 |||||||||||||||||||| Sbjct: 1941902 gagggcgtgctcgccatgga 1941883 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,795,905 Number of Sequences: 3902068 Number of extensions: 2795905 Number of successful extensions: 68404 Number of sequences better than 10.0: 78 Number of HSP's better than 10.0 without gapping: 85 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 65654 Number of HSP's gapped (non-prelim): 2745 length of query: 444 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 422 effective length of database: 17,147,199,772 effective search space: 7236118303784 effective search space used: 7236118303784 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
