Clone Name | bastl44g10 |
---|---|
Clone Library Name | barley_pub |
>tpg|BK005520.1| TPA: TPA_exp: Sus scrofa prepro-beta-defensin 125 protein mRNA, complete cds Length = 796 Score = 42.1 bits (21), Expect = 0.25 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 tctgggagagaagcagctctg 54 ||||||||||||||||||||| Sbjct: 31 tctgggagagaagcagctctg 11
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 gaagcagctctggacgccg 61 ||||||||||||||||||| Sbjct: 2482899 gaagcagctctggacgccg 2482917
>gb|AE007262.1| Sinorhizobium meliloti 1021 plasmid pSymA section 68 of 121 of the complete plasmid sequence Length = 10967 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 gaagcagctctggacgccg 61 ||||||||||||||||||| Sbjct: 9096 gaagcagctctggacgccg 9078
>ref|XM_542950.2| PREDICTED: Canis familiaris similar to forkhead-like 18 (LOC485826), mRNA Length = 1395 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 47 cagctctggacgccgagcc 65 ||||||||||||||||||| Sbjct: 326 cagctctggacgccgagcc 344
>gb|AC123934.2| Mus musculus BAC clone RP23-354D22 from chromosome 17, complete sequence Length = 207817 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 39 gagagaagcagctctggac 57 ||||||||||||||||||| Sbjct: 139659 gagagaagcagctctggac 139641
>gb|AC109612.22| Mus musculus strain C57BL/6J clone rp23-37i3 map 17, complete sequence Length = 179382 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 39 gagagaagcagctctggac 57 ||||||||||||||||||| Sbjct: 323 gagagaagcagctctggac 305
>gb|L79898.1|FUGGNAI2D Fugu rubripes guanine nucleotide binding protein (Gnai2) gene, exons 1-8 and complete cds Length = 6893 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 gaagcagctctggacgccg 61 ||||||||||||||||||| Sbjct: 4175 gaagcagctctggacgccg 4157
>gb|AC010907.10| Homo sapiens BAC clone RP11-568H24 from 2, complete sequence Length = 139357 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 72 tcccttccctcgcacgcac 90 ||||||||||||||||||| Sbjct: 49755 tcccttccctcgcacgcac 49773
>gb|AC114785.5| Homo sapiens BAC clone RP11-607G14 from 2, complete sequence Length = 118022 Score = 38.2 bits (19), Expect = 3.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 38 ggagagaagcagctctgga 56 ||||||||||||||||||| Sbjct: 58828 ggagagaagcagctctgga 58846 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 605,003 Number of Sequences: 3902068 Number of extensions: 605003 Number of successful extensions: 54046 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 54016 Number of HSP's gapped (non-prelim): 30 length of query: 90 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 69 effective length of database: 17,151,101,840 effective search space: 1183426026960 effective search space used: 1183426026960 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)